ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd24l11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete sequence Length = 165394 Score = 317 bits (160), Expect = 3e-83 Identities = 280/319 (87%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 214 ctcgtcggcgaaggcggtggcggggaaggagcggccgatgccgacgttggacttgaagta 273 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 131554 ctcgtcggcgaaggcggaggccgggaaggagcggccgatgccgacgttggacttgaagta 131613 Query: 274 gaccttgtcggcgccgtcgaggctcatctcgacgatgggcacccagagcatcatc-tgct 332 ||| ||||||||||||||||||||||||||||||||| ||||||||||| | | ||| Sbjct: 131614 gacgcggtcggcgccgtcgaggctcatctcgacgatggggacccagagcatgagcctgcc 131673 Query: 333 tgctccggacgccggtcatccgcttcatccgcccttcctccacgtacgccgtcacctagg 392 | | ||| |||||||||||||||||||||| ||||||||||||| |||||||||||| | Sbjct: 131674 t-cgccgcacgccggtcatccgcttcatcctcccttcctccacgaacgccgtcacctcga 131732 Query: 393 cgtcgtagcgcacccgggtgcccgtggcgcggaagtggtgctcgtagggcttnccctgcc 452 ||||||| |||||||| || |||||| ||||||||| ||||||||| ||| ||||| Sbjct: 131733 cgtcgtaccgcacccgcgtccccgtgccgcggaagtagtgctcgtacggcgccttctgcc 131792 Query: 453 gcatncacacgtacccggtctnccgcaccagcccgcactcgtncagcccacgcagcggca 512 |||| |||||| |||| |||| |||||||||||||||||| | |||||| |||||||||| Sbjct: 131793 gcatccacacgaaccccgtctcccgcaccagcccgcactcctccagcccccgcagcggca 131852 Query: 513 tnaccccgccggggaaccc 531 | | ||| ||||| ||||| Sbjct: 131853 tcatccctccgggaaaccc 131871
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 317 bits (160), Expect = 3e-83 Identities = 280/319 (87%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 214 ctcgtcggcgaaggcggtggcggggaaggagcggccgatgccgacgttggacttgaagta 273 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19503688 ctcgtcggcgaaggcggaggccgggaaggagcggccgatgccgacgttggacttgaagta 19503747 Query: 274 gaccttgtcggcgccgtcgaggctcatctcgacgatgggcacccagagcatcatc-tgct 332 ||| ||||||||||||||||||||||||||||||||| ||||||||||| | | ||| Sbjct: 19503748 gacgcggtcggcgccgtcgaggctcatctcgacgatggggacccagagcatgagcctgcc 19503807 Query: 333 tgctccggacgccggtcatccgcttcatccgcccttcctccacgtacgccgtcacctagg 392 | | ||| |||||||||||||||||||||| ||||||||||||| |||||||||||| | Sbjct: 19503808 t-cgccgcacgccggtcatccgcttcatcctcccttcctccacgaacgccgtcacctcga 19503866 Query: 393 cgtcgtagcgcacccgggtgcccgtggcgcggaagtggtgctcgtagggcttnccctgcc 452 ||||||| |||||||| || |||||| ||||||||| ||||||||| ||| ||||| Sbjct: 19503867 cgtcgtaccgcacccgcgtccccgtgccgcggaagtagtgctcgtacggcgccttctgcc 19503926 Query: 453 gcatncacacgtacccggtctnccgcaccagcccgcactcgtncagcccacgcagcggca 512 |||| |||||| |||| |||| |||||||||||||||||| | |||||| |||||||||| Sbjct: 19503927 gcatccacacgaaccccgtctcccgcaccagcccgcactcctccagcccccgcagcggca 19503986 Query: 513 tnaccccgccggggaaccc 531 | | ||| ||||| ||||| Sbjct: 19503987 tcatccctccgggaaaccc 19504005 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 cggtggcggcggccgccggcg 206 ||||||||||||||||||||| Sbjct: 17637810 cggtggcggcggccgccggcg 17637830
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 317 bits (160), Expect = 3e-83 Identities = 280/319 (87%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 214 ctcgtcggcgaaggcggtggcggggaaggagcggccgatgccgacgttggacttgaagta 273 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19514964 ctcgtcggcgaaggcggaggccgggaaggagcggccgatgccgacgttggacttgaagta 19515023 Query: 274 gaccttgtcggcgccgtcgaggctcatctcgacgatgggcacccagagcatcatc-tgct 332 ||| ||||||||||||||||||||||||||||||||| ||||||||||| | | ||| Sbjct: 19515024 gacgcggtcggcgccgtcgaggctcatctcgacgatggggacccagagcatgagcctgcc 19515083 Query: 333 tgctccggacgccggtcatccgcttcatccgcccttcctccacgtacgccgtcacctagg 392 | | ||| |||||||||||||||||||||| ||||||||||||| |||||||||||| | Sbjct: 19515084 t-cgccgcacgccggtcatccgcttcatcctcccttcctccacgaacgccgtcacctcga 19515142 Query: 393 cgtcgtagcgcacccgggtgcccgtggcgcggaagtggtgctcgtagggcttnccctgcc 452 ||||||| |||||||| || |||||| ||||||||| ||||||||| ||| ||||| Sbjct: 19515143 cgtcgtaccgcacccgcgtccccgtgccgcggaagtagtgctcgtacggcgccttctgcc 19515202 Query: 453 gcatncacacgtacccggtctnccgcaccagcccgcactcgtncagcccacgcagcggca 512 |||| |||||| |||| |||| |||||||||||||||||| | |||||| |||||||||| Sbjct: 19515203 gcatccacacgaaccccgtctcccgcaccagcccgcactcctccagcccccgcagcggca 19515262 Query: 513 tnaccccgccggggaaccc 531 | | ||| ||||| ||||| Sbjct: 19515263 tcatccctccgggaaaccc 19515281 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 cggtggcggcggccgccggcg 206 ||||||||||||||||||||| Sbjct: 17646850 cggtggcggcggccgccggcg 17646870
>ref|NM_197370.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0076F20.19), mRNA Length = 411 Score = 311 bits (157), Expect = 2e-81 Identities = 266/301 (88%), Gaps = 2/301 (0%) Strand = Plus / Minus Query: 214 ctcgtcggcgaaggcggtggcggggaaggagcggccgatgccgacgttggacttgaagta 273 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 303 ctcgtcggcgaaggcggaggccgggaaggagcggccgatgccgacgttggacttgaagta 244 Query: 274 gaccttgtcggcgccgtcgaggctcatctcgacgatgggcacccagagcatcatc-tgct 332 ||| ||||||||||||||||||||||||||||||||| ||||||||||| | | ||| Sbjct: 243 gacgcggtcggcgccgtcgaggctcatctcgacgatggggacccagagcatgagcctgcc 184 Query: 333 tgctccggacgccggtcatccgcttcatccgcccttcctccacgtacgccgtcacctagg 392 | | ||| |||||||||||||||||||||| ||||||||||||| |||||||||||| | Sbjct: 183 t-cgccgcacgccggtcatccgcttcatcctcccttcctccacgaacgccgtcacctcga 125 Query: 393 cgtcgtagcgcacccgggtgcccgtggcgcggaagtggtgctcgtagggcttnccctgcc 452 ||||||| |||||||| || |||||| ||||||||| ||||||||| ||| ||||| Sbjct: 124 cgtcgtaccgcacccgcgtccccgtgccgcggaagtagtgctcgtacggcgccttctgcc 65 Query: 453 gcatncacacgtacccggtctnccgcaccagcccgcactcgtncagcccacgcagcggca 512 |||| |||||| |||| |||| |||||||||||||||||| | |||||| |||||||||| Sbjct: 64 gcatccacacgaaccccgtctcccgcaccagcccgcactcctccagcccccgcagcggca 5 Query: 513 t 513 | Sbjct: 4 t 4
>gb|AY112303.1| Zea mays CL26549_1 mRNA sequence Length = 842 Score = 266 bits (134), Expect = 8e-68 Identities = 304/366 (83%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 254 ccgacgttggacttgaagtagaccttgtcgg------cgccgtcgaggctcatctcgacg 307 |||||||||||||||||||||| ||||||| | ||||||||||||||||||||| Sbjct: 331 ccgacgttggacttgaagtagatcttgtcgcgcttctctccgtcgaggctcatctcgacg 390 Query: 308 atgggcacccagagcatcatctgcttgctccggacgccggtcatccgcttcatccgccct 367 ||||||||||||||||| | ||||||||| || || |||||||| ||||||||||| || Sbjct: 391 atgggcacccagagcatgacctgcttgctgcgcaccccggtcatgcgcttcatccggccg 450 Query: 368 tcctccacgtacgccgtcacctaggcgtcgtagcgcacccgggtgcccgtggcgcggaag 427 |||||||||||||| || |||| |||||||||||||||||| ||||||||| |||||||| Sbjct: 451 tcctccacgtacgcggtgacctcggcgtcgtagcgcacccgcgtgcccgtgccgcggaag 510 Query: 428 tggtgctcgtagggcttnccctgccgcatncacacgtacccggtctnccgcaccagcccg 487 | ||||||||| ||||||||| |||||| ||||||||| |||||| ||| Sbjct: 511 tagtgctcgtannnnnccttctgccgcatccacacgaacccggtctcgcgcacccagccg 570 Query: 488 cactcgtncagcccacgcagcggcatnaccccgccggggaaccccagccccttaaggagc 547 ||||| | ||| |||||||||| || ||||| ||||| |||||| ||| || | | Sbjct: 571 cactcctccagnnnnngcagcggcatcacgccgcccgggaagcccagcgcctggagcatc 630 Query: 548 tccttggagtgcgcgtagcacgcctccgcgccggtgatgatttccgcgccctcgcgttgc 607 | ||||||||||||| |||| ||||||||||| ||||||| |||||||||||||| ||| Sbjct: 631 tgcttggagtgcgcgaagcaggcctccgcgcccgtgatgacctccgcgccctcgcgctgc 690 Query: 608 ttgttg 613 |||||| Sbjct: 691 ttgttg 696
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 213 cctcgtcggcgaaggcggtggcgg 236 |||||||||||||||||||||||| Sbjct: 6393960 cctcgtcggcgaaggcggtggcgg 6393937 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 cgtcggcgaaggcggtggcg 235 |||||||||||||||||||| Sbjct: 6103621 cgtcggcgaaggcggtggcg 6103640 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 gaccttgtcggcgccgtcga 293 |||||||||||||||||||| Sbjct: 3456365 gaccttgtcggcgccgtcga 3456346
>ref|XM_311097.2| Anopheles gambiae str. PEST ENSANGP00000017381 (ENSANGG00000014892), partial mRNA Length = 2181 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 200 gccggcgcgtcgtcctcgtcggcg 223 |||||||||||||||||||||||| Sbjct: 158 gccggcgcgtcgtcctcgtcggcg 135
>ref|NM_190747.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 684 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 185 tcggtggcggcggccgccggcgcgtcg 211 |||| |||||||||||||||||||||| Sbjct: 103 tcggcggcggcggccgccggcgcgtcg 129
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 185 tcggtggcggcggccgccggcgcgtcg 211 |||| |||||||||||||||||||||| Sbjct: 37498573 tcggcggcggcggccgccggcgcgtcg 37498599 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 cgcctccgcgccggtgatga 587 |||||||||||||||||||| Sbjct: 3960048 cgcctccgcgccggtgatga 3960029
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 185 tcggtggcggcggccgccggcgcgtcg 211 |||| |||||||||||||||||||||| Sbjct: 93110 tcggcggcggcggccgccggcgcgtcg 93136
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 208 gtcgtcctcgtcggcgaaggcgg 230 ||||||||||||||||||||||| Sbjct: 1866826 gtcgtcctcgtcggcgaaggcgg 1866848 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 208 gtcgtcctcgtcggcgaaggcggtggcg 235 ||||| ||||||||||| |||||||||| Sbjct: 2390945 gtcgtgctcgtcggcgacggcggtggcg 2390918
>dbj|AK108924.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-H11, full insert sequence Length = 935 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 185 tcggtggcggcggccgccggcgcgtcg 211 |||| |||||||||||||||||||||| Sbjct: 160 tcggcggcggcggccgccggcgcgtcg 186
>ref|XM_464530.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1149 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 187 ggtggcggcggccgccggcgcgtcgtcctc 216 ||||||||| ||||||| |||||||||||| Sbjct: 108 ggtggcggccgccgccgccgcgtcgtcctc 137
>ref|XM_507458.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1135_F06.7 mRNA Length = 1209 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 187 ggtggcggcggccgccggcgcgtcgtcctc 216 ||||||||| ||||||| |||||||||||| Sbjct: 136 ggtggcggccgccgccgccgcgtcgtcctc 165
>ref|XM_506752.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1135_F06.7 mRNA Length = 1299 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 187 ggtggcggcggccgccggcgcgtcgtcctc 216 ||||||||| ||||||| |||||||||||| Sbjct: 108 ggtggcggccgccgccgccgcgtcgtcctc 137
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 187 ggtggcggcggccgccggcgcgtcgtcctc 216 ||||||||| ||||||| |||||||||||| Sbjct: 5748007 ggtggcggccgccgccgccgcgtcgtcctc 5747978
>dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1135_F06 Length = 102230 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 187 ggtggcggcggccgccggcgcgtcgtcctc 216 ||||||||| ||||||| |||||||||||| Sbjct: 37521 ggtggcggccgccgccgccgcgtcgtcctc 37492
>dbj|AK101844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069H18, full insert sequence Length = 1299 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 187 ggtggcggcggccgccggcgcgtcgtcctc 216 ||||||||| ||||||| |||||||||||| Sbjct: 108 ggtggcggccgccgccgccgcgtcgtcctc 137
>dbj|AK099277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109C15, full insert sequence Length = 1149 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 187 ggtggcggcggccgccggcgcgtcgtcctc 216 ||||||||| ||||||| |||||||||||| Sbjct: 108 ggtggcggccgccgccgccgcgtcgtcctc 137
>dbj|AK068376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013150O18, full insert sequence Length = 1209 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 187 ggtggcggcggccgccggcgcgtcgtcctc 216 ||||||||| ||||||| |||||||||||| Sbjct: 136 ggtggcggccgccgccgccgcgtcgtcctc 165
>ref|NM_197037.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0093B11.14), mRNA Length = 1191 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 cggtggcggcggccgccggcg 206 ||||||||||||||||||||| Sbjct: 907 cggtggcggcggccgccggcg 887
>ref|XM_524699.1| PREDICTED: Pan troglodytes similar to forkhead box D2; forkhead-related activator 9; Forkhead, drosophila, homolog-like 17; forkhead (Drosophila)-like 17; freac-9 (LOC469314), mRNA Length = 2958 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 184 ctcggtggcggcggccgccggcgcgtcgt 212 ||||||||||| ||||||||||| ||||| Sbjct: 1460 ctcggtggcgggggccgccggcgggtcgt 1488
>gb|AC137924.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0095K08, complete sequence Length = 180999 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 197 gccgccggcgcgtcgtcctcgtcggcgaaggcg 229 ||||||| |||||||||||||||| | |||||| Sbjct: 99719 gccgccgccgcgtcgtcctcgtcgaccaaggcg 99751 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 gccgccggcgcgtcgtcctcgtcg 220 ||||||| |||||||||||||||| Sbjct: 61057 gccgccgccgcgtcgtcctcgtcg 61080
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 gcggcggccgccggcgcgtcg 211 ||||||||||||||||||||| Sbjct: 2017592 gcggcggccgccggcgcgtcg 2017612
>ref|XM_677089.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8912.2), mRNA Length = 1587 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 ggccgccggcgcgtcgtcctc 216 ||||||||||||||||||||| Sbjct: 1039 ggccgccggcgcgtcgtcctc 1059
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 579 cggtgatgatttccgcgccctcgcg 603 |||||||||||||||||| |||||| Sbjct: 1284957 cggtgatgatttccgcgcgctcgcg 1284981
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 gccgccggtgtcgtctgcgag 643 ||||||||||||||||||||| Sbjct: 5003642 gccgccggtgtcgtctgcgag 5003662
>ref|XM_804402.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507969.40) partial mRNA Length = 897 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 186 cggtggcggcggccgccggcgcgtc 210 ||||||||||||| ||||||||||| Sbjct: 338 cggtggcggcggcggccggcgcgtc 362
>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12 Length = 286550 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 612 tggcgttgctggccgccggtg 632 ||||||||||||||||||||| Sbjct: 65257 tggcgttgctggccgccggtg 65277
>ref|XM_504635.1| Yarrowia lipolytica CLIB122, YALI0E31427g predicted mRNA Length = 1467 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ttggcctcggtggcggcggcc 199 ||||||||||||||||||||| Sbjct: 80 ttggcctcggtggcggcggcc 60
>emb|BX571774.9| Zebrafish DNA sequence from clone DKEY-250A19 in linkage group 9, complete sequence Length = 140812 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 aacaattaatagaagcaaaca 37 ||||||||||||||||||||| Sbjct: 27099 aacaattaatagaagcaaaca 27079
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 579 cggtgatgatttccgcgccctcgcg 603 |||||||||||||||||| |||||| Sbjct: 1082278 cggtgatgatttccgcgcgctcgcg 1082302
>gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 genomic sequence, complete sequence Length = 178692 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 cggtggcggcggccgccggcg 206 ||||||||||||||||||||| Sbjct: 36821 cggtggcggcggccgccggcg 36801
>gb|AE012077.1| Xanthomonas axonopodis pv. citri str. 306, section 455 of 469 of the complete genome Length = 9754 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 gccgccggtgtcgtctgcgag 643 ||||||||||||||||||||| Sbjct: 2373 gccgccggtgtcgtctgcgag 2393
>gb|AE012198.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 106 of 460 of the complete genome Length = 12541 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 613 ggcgttgctggccgccggtgt 633 ||||||||||||||||||||| Sbjct: 5141 ggcgttgctggccgccggtgt 5161
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 ggcgcgtcgtcctcgtcggcg 223 ||||||||||||||||||||| Sbjct: 3488238 ggcgcgtcgtcctcgtcggcg 3488258
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 613 ggcgttgctggccgccggtgt 633 ||||||||||||||||||||| Sbjct: 3873816 ggcgttgctggccgccggtgt 3873796 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 gtcgtcctcgtcggcgaagg 227 |||||||||||||||||||| Sbjct: 3777156 gtcgtcctcgtcggcgaagg 3777137
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 197 gccgccggcgcgtcgtcctcgtcggcgaaggcg 229 ||||||| |||||||||||||||| | |||||| Sbjct: 7898229 gccgccgccgcgtcgtcctcgtcgaccaaggcg 7898197 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 gccgccggcgcgtcgtcctcgtcg 220 ||||||| |||||||||||||||| Sbjct: 7936891 gccgccgccgcgtcgtcctcgtcg 7936868
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 accttgtcggcgccgtcgagg 295 ||||||||||||||||||||| Sbjct: 19858809 accttgtcggcgccgtcgagg 19858829 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 cctcggtggcggcggccgccggcg 206 |||||| ||||||||||||||||| Sbjct: 18516965 cctcggcggcggcggccgccggcg 18516942
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 267 tgaagtagaccttgtcggcgccgtc 291 |||||||||||||||||||| |||| Sbjct: 2388574 tgaagtagaccttgtcggcggcgtc 2388550 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 358 catccgcccttcctccacgtacgccgtcacct 389 ||||||||| | ||||||| |||||||||||| Sbjct: 19876519 catccgcccctgctccacgaacgccgtcacct 19876550
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 cgccggcgcgtcgtcctcgtc 219 ||||||||||||||||||||| Sbjct: 308181 cgccggcgcgtcgtcctcgtc 308201 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ggcggcggccgccggcgcgtcgtc 213 ||||||||||||||||||| |||| Sbjct: 1836423 ggcggcggccgccggcgcggcgtc 1836446
>dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036F10 Length = 149415 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 267 tgaagtagaccttgtcggcgccgtc 291 |||||||||||||||||||| |||| Sbjct: 20032 tgaagtagaccttgtcggcggcgtc 20008
>dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0007O20 Length = 147363 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 267 tgaagtagaccttgtcggcgccgtc 291 |||||||||||||||||||| |||| Sbjct: 110375 tgaagtagaccttgtcggcggcgtc 110351
>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0034B12 Length = 124083 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 accttgtcggcgccgtcgagg 295 ||||||||||||||||||||| Sbjct: 83249 accttgtcggcgccgtcgagg 83269
>dbj|AK122183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150B12, full insert sequence Length = 1987 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 cggtggcggcggccgccggcg 206 ||||||||||||||||||||| Sbjct: 89 cggtggcggcggccgccggcg 69
>dbj|AK121098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069E11, full insert sequence Length = 714 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 cggtggcggcggccgccggcg 206 ||||||||||||||||||||| Sbjct: 88 cggtggcggcggccgccggcg 68
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 197 gccgccggcgcgtcgtcctcgtcggcgaaggcg 229 ||||||| |||||||||||||||| | |||||| Sbjct: 7968316 gccgccgccgcgtcgtcctcgtcgaccaaggcg 7968284 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 gccgccggcgcgtcgtcctcgtcg 220 ||||||| |||||||||||||||| Sbjct: 8006978 gccgccgccgcgtcgtcctcgtcg 8006955
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 cgccgtcgaggctcatctcgacgat 309 ||||||||||||| ||||||||||| Sbjct: 6673353 cgccgtcgaggctgatctcgacgat 6673377
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 ttggcctcggtggcggcggcc 199 ||||||||||||||||||||| Sbjct: 3708313 ttggcctcggtggcggcggcc 3708333
>ref|XM_550315.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3282 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 cgcctccgcgccggtgatga 587 |||||||||||||||||||| Sbjct: 2427 cgcctccgcgccggtgatga 2408
>ref|XM_475769.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1773 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 ccgccggcgcgtcgtcctcgtcgg 221 |||||| ||||||||||||||||| Sbjct: 352 ccgccgccgcgtcgtcctcgtcgg 329
>ref|XM_475716.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2700 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 gccgccggcgcgtcgtcctcgtcg 220 ||||||||| |||||||||||||| Sbjct: 173 gccgccggctcgtcgtcctcgtcg 150
>ref|XM_476665.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3330 Score = 40.1 bits (20), Expect = 8.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 197 gccgccggcgcgtcgtcctcgtcggcgaaggcggtggcgg 236 ||||||| |||| |||| ||||||||| ||||||||||| Sbjct: 61 gccgccgccgcggcgtcgtcgtcggcggcggcggtggcgg 100
>gb|AC090426.1| Homo sapiens chromosome 17 clone 205m17 map 17q21.1, complete sequence Length = 138999 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cagatcattcgtatcacaca 133 |||||||||||||||||||| Sbjct: 136431 cagatcattcgtatcacaca 136450
>gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0782F03 map near S2137, complete sequence Length = 197516 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 gccgccggcgcgtcgtcctcgtcg 220 ||||||| |||||||||||||||| Sbjct: 17767 gccgccgccgcgtcgtcctcgtcg 17744
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cggcggccgccggcgcgtcg 211 |||||||||||||||||||| Sbjct: 1414607 cggcggccgccggcgcgtcg 1414588
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 ccgccggcgcgtcgtcctcgtcgg 221 |||||| ||||||||||||||||| Sbjct: 46537 ccgccgccgcgtcgtcctcgtcgg 46514
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 cggtggcggggaaggagcgg 247 |||||||||||||||||||| Sbjct: 747574 cggtggcggggaaggagcgg 747593
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 gccgccggcgcgtcgtcctcgtcg 220 ||||||||| |||||||||||||| Sbjct: 81990 gccgccggctcgtcgtcctcgtcg 81967
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gccgccggcgcgtcgtcctc 216 |||||||||||||||||||| Sbjct: 9332429 gccgccggcgcgtcgtcctc 9332410
>ref|XM_842736.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0806) partial mRNA Length = 6432 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cggtggcggggaaggagcgg 247 |||||||||||||||||||| Sbjct: 1281 cggtggcggggaaggagcgg 1262
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ttggcctcggtggcggcggc 198 |||||||||||||||||||| Sbjct: 3052813 ttggcctcggtggcggcggc 3052832
>gb|AC080112.15| Homo sapiens chromosome 17, clone CTD-2267D19, complete sequence Length = 175014 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cagatcattcgtatcacaca 133 |||||||||||||||||||| Sbjct: 120351 cagatcattcgtatcacaca 120370
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 gaccttgtcggcgccgtcga 293 |||||||||||||||||||| Sbjct: 2249976 gaccttgtcggcgccgtcga 2249957
>emb|AL355599.7| Human DNA sequence from clone RP11-476C5 on chromosome 13, complete sequence Length = 80674 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aatagaagcaaacacgcaaa 43 |||||||||||||||||||| Sbjct: 7271 aatagaagcaaacacgcaaa 7290
>gb|AY150310.1| Homo sapiens CDC6 cell division cycle 6 homolog (S. cerevisiae) (CDC6) gene, complete cds Length = 17981 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cagatcattcgtatcacaca 133 |||||||||||||||||||| Sbjct: 17338 cagatcattcgtatcacaca 17319
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 cgtcctcgtcggcgaaggcg 229 |||||||||||||||||||| Sbjct: 47399 cgtcctcgtcggcgaaggcg 47418
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cggcggccgccggcgcgtcg 211 |||||||||||||||||||| Sbjct: 1286541 cggcggccgccggcgcgtcg 1286522
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 219 cggcgaaggcggtggcggggaagg 242 ||||||||||||||||||| |||| Sbjct: 96290 cggcgaaggcggtggcgggaaagg 96313
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 aggagcggccgatgccgacg 259 |||||||||||||||||||| Sbjct: 467116 aggagcggccgatgccgacg 467135
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gtggcggcggccgccggcgc 207 |||||||||||||||||||| Sbjct: 94207 gtggcggcggccgccggcgc 94226
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 gtggcggcggccgccggcgc 207 |||||||||||||||||||| Sbjct: 35666 gtggcggcggccgccggcgc 35647
>gb|AE012207.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 115 of 460 of the complete genome Length = 13425 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 gtcgtcctcgtcggcgaagg 227 |||||||||||||||||||| Sbjct: 9494 gtcgtcctcgtcggcgaagg 9513
>gb|AC084429.5| Mus Musculus Chromosome 2 Clone RP23-291P1, complete sequence Length = 181684 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 gcacccagagcatcatctgc 331 |||||||||||||||||||| Sbjct: 179541 gcacccagagcatcatctgc 179522
>gb|AF466285.1| Oryza sativa susceptibility homeodomain transciption factor (HDTF) mRNA, partial cds Length = 580 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 358 catccgcccttcctccacgtacgccgtcacct 389 ||||||||| | ||||||| |||||||||||| Sbjct: 146 catccgcccctgctccacgaacgccgtcacct 115
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gccgccggcgcgtcgtcctc 216 |||||||||||||||||||| Sbjct: 29829 gccgccggcgcgtcgtcctc 29810
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gcggccgatgccgacgttgg 263 |||||||||||||||||||| Sbjct: 752779 gcggccgatgccgacgttgg 752760
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cggtggcggcggccgccggc 205 |||||||||||||||||||| Sbjct: 842805 cggtggcggcggccgccggc 842786
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 gaccttgtcggcgccgtcga 293 |||||||||||||||||||| Sbjct: 3949734 gaccttgtcggcgccgtcga 3949753
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 ggtggcggcggccgccggcg 206 |||||||||||||||||||| Sbjct: 25814998 ggtggcggcggccgccggcg 25815017 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cggcgaaggcggtggcgggg 238 |||||||||||||||||||| Sbjct: 14177339 cggcgaaggcggtggcgggg 14177320
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cggtggcggcggccgccggc 205 |||||||||||||||||||| Sbjct: 10114746 cggtggcggcggccgccggc 10114727
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 197 gccgccggcgcgtcgtcctcgtcggcgaaggcggtggcgg 236 ||||||| |||| |||| ||||||||| ||||||||||| Sbjct: 2793723 gccgccgccgcggcgtcgtcgtcggcggcggcggtggcgg 2793684
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 ccgccggcgcgtcgtcctcgtcgg 221 |||||| ||||||||||||||||| Sbjct: 26401846 ccgccgccgcgtcgtcctcgtcgg 26401823 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 gccgccggcgcgtcgtcctcgtcg 220 ||||||||| |||||||||||||| Sbjct: 25441629 gccgccggctcgtcgtcctcgtcg 25441606
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gccgccggcgcgtcgtcctc 216 |||||||||||||||||||| Sbjct: 9330324 gccgccggcgcgtcgtcctc 9330305
>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013F10 Length = 163095 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 cgcctccgcgccggtgatga 587 |||||||||||||||||||| Sbjct: 81952 cgcctccgcgccggtgatga 81933
>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0014A21, from chromosome 3, complete sequence Length = 134014 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gccgccggcgcgtcgtcctc 216 |||||||||||||||||||| Sbjct: 23762 gccgccggcgcgtcgtcctc 23781
>dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0551A03 Length = 173027 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 358 catccgcccttcctccacgtacgccgtcacct 389 ||||||||| | ||||||| |||||||||||| Sbjct: 143564 catccgcccctgctccacgaacgccgtcacct 143595
>dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1018E06 Length = 178499 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 358 catccgcccttcctccacgtacgccgtcacct 389 ||||||||| | ||||||| |||||||||||| Sbjct: 14859 catccgcccctgctccacgaacgccgtcacct 14890
>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1364A02 Length = 137933 Score = 40.1 bits (20), Expect = 8.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 197 gccgccggcgcgtcgtcctcgtcggcgaaggcggtggcgg 236 ||||||| |||| |||| ||||||||| ||||||||||| Sbjct: 97284 gccgccgccgcggcgtcgtcgtcggcggcggcggtggcgg 97245
>dbj|AK122046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114A14, full insert sequence Length = 779 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 358 catccgcccttcctccacgtacgccgtcacct 389 ||||||||| | ||||||| |||||||||||| Sbjct: 356 catccgcccctgctccacgaacgccgtcacct 325
>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0023I13 Length = 165911 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cggtggcggcggccgccggc 205 |||||||||||||||||||| Sbjct: 74092 cggtggcggcggccgccggc 74073
>ref|XM_309714.2| Anopheles gambiae str. PEST ENSANGP00000012581 (ENSANGG00000010092), partial mRNA Length = 4743 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 gtcgtcctcgtcggcgaagg 227 |||||||||||||||||||| Sbjct: 4329 gtcgtcctcgtcggcgaagg 4348
>dbj|AK073885.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073G16, full insert sequence Length = 976 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 cctcggtggcggcggccgccggcg 206 |||||| ||||||||||||||||| Sbjct: 217 cctcggcggcggcggccgccggcg 194
>dbj|AK072066.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110H22, full insert sequence Length = 3498 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 gccgccggcgcgtcgtcctcgtcg 220 ||||||||| |||||||||||||| Sbjct: 348 gccgccggctcgtcgtcctcgtcg 325
>ref|NM_210324.1| Eremothecium gossypii AER110Wp (AER110W), mRNA Length = 3918 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cggtggcggcggccgccggc 205 |||||||||||||||||||| Sbjct: 210 cggtggcggcggccgccggc 191
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 193 ggcggccgccggcgcgtcgtcctcgtcg 220 ||||||||||||||||||| | |||||| Sbjct: 546978 ggcggccgccggcgcgtcgccgtcgtcg 547005
>dbj|AK063825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-A08, full insert sequence Length = 784 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 358 catccgcccttcctccacgtacgccgtcacct 389 ||||||||| | ||||||| |||||||||||| Sbjct: 350 catccgcccctgctccacgaacgccgtcacct 319
>gb|AC115853.8| Mus musculus chromosome 5, clone RP24-273B9, complete sequence Length = 188562 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 caaacacgcaaaatagaaaa 51 |||||||||||||||||||| Sbjct: 3348 caaacacgcaaaatagaaaa 3329
>gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, complete sequence Length = 240821 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 caaacacgcaaaatagaaaa 51 |||||||||||||||||||| Sbjct: 209924 caaacacgcaaaatagaaaa 209905
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 611 ttggcgttgctggccgccgg 630 |||||||||||||||||||| Sbjct: 4737282 ttggcgttgctggccgccgg 4737301
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 ggtggcggcggccgccggcg 206 |||||||||||||||||||| Sbjct: 25743174 ggtggcggcggccgccggcg 25743193 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cggcgaaggcggtggcgggg 238 |||||||||||||||||||| Sbjct: 14131619 cggcgaaggcggtggcgggg 14131600
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137492 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 ggtggcggcggccgccggcg 206 |||||||||||||||||||| Sbjct: 36449 ggtggcggcggccgccggcg 36468
>emb|AL732644.3|CNS08C9J Oryza sativa chromosome 12, . BAC OSJNBa0016A01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150703 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cggcgaaggcggtggcgggg 238 |||||||||||||||||||| Sbjct: 103880 cggcgaaggcggtggcgggg 103861
>gb|U81968.1|RSU81968 Rhodovulum sulfidophilum nucleoside-diphosphate-kinase (ndk), peripheral light harvesting complex subunits beta (pucB) and alpha precursor (pucA), and putative regulatory protein PucC (pucC) genes, complete cds Length = 4837 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ggcctcggtggcggcggccg 200 |||||||||||||||||||| Sbjct: 4102 ggcctcggtggcggcggccg 4083
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 tggcctcggtggcggcggccgccg 203 ||||| |||||||||||||||||| Sbjct: 2879275 tggccccggtggcggcggccgccg 2879252 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tggcggcggccgccggcgcg 208 |||||||||||||||||||| Sbjct: 1139396 tggcggcggccgccggcgcg 1139377
>emb|AL929221.6| Mouse DNA sequence from clone RP23-431D4 on chromosome 2, complete sequence Length = 160170 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 gcacccagagcatcatctgc 331 |||||||||||||||||||| Sbjct: 150408 gcacccagagcatcatctgc 150427 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,853,912 Number of Sequences: 3902068 Number of extensions: 3853912 Number of successful extensions: 88330 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83163 Number of HSP's gapped (non-prelim): 5163 length of query: 655 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 632 effective length of database: 17,143,297,704 effective search space: 10834564148928 effective search space used: 10834564148928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
