>ZF260_MOUSE (Q62513) Zinc finger protein 260 (Zfp-260)|
          Length = 407

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 244 KCSQISKKXXQFPKKYVMNSKNIHQNKKNCKCSPIAK 134
           +CSQ  +   Q  K+Y++  +NIH  KK  KC+   K
Sbjct: 160 ECSQCGRAFSQ--KQYLIKHQNIHSGKKPFKCNECGK 194

>ZF260_HUMAN (Q3ZCT1) Zinc finger protein 260 homolog (Zfp-260)|
          Length = 409

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 244 KCSQISKKXXQFPKKYVMNSKNIHQNKKNCKCSPIAK 134
           +C+Q  +   Q  K+Y++  +NIH  KK  KCS   K
Sbjct: 162 ECNQCGRAFSQ--KQYLIKHQNIHTGKKPFKCSECGK 196

>ZFP62_MOUSE (Q8C827) Zinc finger protein 62 homolog (Zfp-62) (ZT3)|
          Length = 914

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -3

Query: 244 KCSQISKKXXQFPKKYVMNSKNIHQNKKNCKCSPIAKFKN 125
           KC +  K    +    ++N K+ H  +KNCKC    K  N
Sbjct: 188 KCDECGKAYMSYSS--LINHKSTHSGEKNCKCDECGKSFN 225

>ZF260_RAT (Q62981) Zinc finger protein 260 (Zfp-260) (POZF-1) (Pancreas-only|
           zinc finger protein 1)
          Length = 407

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -3

Query: 244 KCSQISKKXXQFPKKYVMNSKNIHQNKKNCKCSPIAK 134
           +C+Q  +   Q  K+Y++  +N+H  KK  KC+   K
Sbjct: 160 ECNQCGRAFSQ--KQYLIKHQNVHSGKKPFKCNECGK 194

>YCF1A_MARPO (P12221) Hypothetical 127 kDa protein ycf1 (ORF 1068)|
          Length = 1068

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 21/69 (30%), Positives = 29/69 (42%)
 Frame = -3

Query: 223  KXXQFPKKYVMNSKNIHQNKKNCKCSPIAKFKNLQV*XMLKFSPNMNLKNCMQIIIVFMK 44
            K   F K Y  N KNI    K  K S +   KN         +PN+N  +  +  +V  K
Sbjct: 897  KKNMFFKPY-QNLKNISTKNKLYKISDVENLKNFNSKKKEYINPNLNNLDFKKKNVVITK 955

Query: 43   LFNEHDFXK 17
            L N++   K
Sbjct: 956  LNNQNTLLK 964


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,704,658
Number of Sequences: 219361
Number of extensions: 513764
Number of successful extensions: 1072
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)