ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd24l06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103915.1| Zea mays PCO106165 mRNA sequence Length = 978 Score = 216 bits (109), Expect = 4e-53 Identities = 224/264 (84%) Strand = Plus / Minus Query: 157 tagaacaaccggtacanntttcccattgtgctcttcaggtacaggcaccgcacgtnttgc 216 ||||||| |||||||| |||||||| |||||||||||||||| ||| | ||| | ||| Sbjct: 766 tagaacagccggtacacctttcccatagtgctcttcaggtacaagcatctcacattctgc 707 Query: 217 caattcttcttcancanagagacaaggaagttcacgctcatctgcacgttctggaagatc 276 |||||||| |||| | || || |||||||| || ||||| |||||||||||||||||| Sbjct: 706 caattctttttcaagagcgacacgaggaagttgacactcatttgcacgttctggaagatc 647 Query: 277 tgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttcaac 336 |||||||| ||||| || || |||||| ||||||||||||||||||||||| |||| | Sbjct: 646 tgcttctcatccatgccgcagttgccaacagcaacacccatgcaaagcaccttcttcagc 587 Query: 337 tggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtgagac 396 |||||||| || || ||||| |||||||||||||||||||||||||| |||||||| | | Sbjct: 586 tggaacttaactgtagcctttgtctcattaaccttggactcaagggattcctggtgtgtc 527 Query: 397 accaaagttggaaactttcctgcc 420 ||||| || || || ||||||||| Sbjct: 526 accaaggtagggaattttcctgcc 503
>ref|NM_190697.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 627 Score = 206 bits (104), Expect = 4e-50 Identities = 200/233 (85%) Strand = Plus / Minus Query: 175 tttcccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancana 234 |||||||| |||||||||||||||| ||| | ||||| |||||||||||||||| | | Sbjct: 608 tttcccatagtgctcttcaggtacaagcatctcacgttctgccaattcttcttcaaaaga 549 Query: 235 gagacaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccataccc 294 ||||||||||||||||||||||| ||||| || ||||| || ||||||||||||||| | Sbjct: 548 gagacaaggaagttcacgctcatttgcacattttggaaaatttgcttctcctccatagca 489 Query: 295 aggtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcc 354 || ||| || ||||||||||||||||| |||||||||| |||||||| || || ||| Sbjct: 488 cagttgcctacagcaacacccatgcaaagaacctttttcagttggaacttcactgtagcc 429 Query: 355 ttggtctcattaaccttggactcaagggactcctggtgagacaccaaagttgg 407 || ||||| ||||||||||||||||| || |||||||||| |||||| ||||| Sbjct: 428 ttagtctcgttaaccttggactcaagtgattcctggtgagtcaccaacgttgg 376
>dbj|AK102574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097O05, full insert sequence Length = 917 Score = 206 bits (104), Expect = 4e-50 Identities = 213/251 (84%) Strand = Plus / Minus Query: 157 tagaacaaccggtacanntttcccattgtgctcttcaggtacaggcaccgcacgtnttgc 216 ||||||| ||||||| |||||||| |||||||||||||||| ||||| |||| ||| Sbjct: 723 tagaacactcggtacacctttcccatggtgctcttcaggtacaagcacctaacgttctgc 664 Query: 217 caattcttcttcancanagagacaaggaagttcacgctcatctgcacgttctggaagatc 276 ||||||||||||| | || |||||||||||||||||||||||||| || ||||||||| Sbjct: 663 caattcttcttcaaaagggaaacaaggaagttcacgctcatctgcacattttggaagatc 604 Query: 277 tgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttcaac 336 ||||||||||||||| | || |||||| |||||||||||||| || ||||| |||| | Sbjct: 603 tgcttctcctccatagcacagttgccaacagcaacacccatgcagagaaccttcttcagc 544 Query: 337 tggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtgagac 396 ||||| || || || ||||| ||||||||||||||||||||||| || ||||| || | | Sbjct: 543 tggaatttcactgtagccttagtctcattaaccttggactcaagtgattcctgatgcgtc 484 Query: 397 accaaagttgg 407 |||| |||||| Sbjct: 483 accagagttgg 473
>dbj|AK062103.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A11, full insert sequence Length = 915 Score = 206 bits (104), Expect = 4e-50 Identities = 213/251 (84%) Strand = Plus / Minus Query: 157 tagaacaaccggtacanntttcccattgtgctcttcaggtacaggcaccgcacgtnttgc 216 ||||||| ||||||| |||||||| |||||||||||||||| ||||| |||| ||| Sbjct: 722 tagaacactcggtacacctttcccatggtgctcttcaggtacaagcacctaacgttctgc 663 Query: 217 caattcttcttcancanagagacaaggaagttcacgctcatctgcacgttctggaagatc 276 ||||||||||||| | || |||||||||||||||||||||||||| || ||||||||| Sbjct: 662 caattcttcttcaaaagggaaacaaggaagttcacgctcatctgcacattttggaagatc 603 Query: 277 tgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttcaac 336 ||||||||||||||| | || |||||| |||||||||||||| || ||||| |||| | Sbjct: 602 tgcttctcctccatagcacagttgccaacagcaacacccatgcagagaaccttcttcagc 543 Query: 337 tggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtgagac 396 ||||| || || || ||||| ||||||||||||||||||||||| || ||||| || | | Sbjct: 542 tggaatttcactgtagccttagtctcattaaccttggactcaagtgattcctgatgcgtc 483 Query: 397 accaaagttgg 407 |||| |||||| Sbjct: 482 accagagttgg 472
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 174 bits (88), Expect = 1e-40 Identities = 167/194 (86%) Strand = Plus / Minus Query: 214 tgccaattcttcttcancanagagacaaggaagttcacgctcatctgcacgttctggaag 273 |||||||||||||||| | |||||||||||||||||||||||| ||||| || ||||| Sbjct: 37227203 tgccaattcttcttcaaaagagagacaaggaagttcacgctcatttgcacattttggaaa 37227144 Query: 274 atctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttc 333 || ||||||||||||||| | || ||| || ||||||||||||||||| ||||||||| Sbjct: 37227143 atttgcttctcctccatagcacagttgcctacagcaacacccatgcaaagaacctttttc 37227084 Query: 334 aactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtga 393 | |||||||| || || ||||| ||||| ||||||||||||||||| || ||||||||| Sbjct: 37227083 agttggaacttcactgtagccttagtctcgttaaccttggactcaagtgattcctggtga 37227024 Query: 394 gacaccaaagttgg 407 | |||||| ||||| Sbjct: 37227023 gtcaccaacgttgg 37227010 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 175 tttcccattgtgctcttcaggtaca 199 |||||||| |||||||||||||||| Sbjct: 37227615 tttcccatagtgctcttcaggtaca 37227591
>dbj|AP003794.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489B03 Length = 150381 Score = 174 bits (88), Expect = 1e-40 Identities = 167/194 (86%) Strand = Plus / Minus Query: 214 tgccaattcttcttcancanagagacaaggaagttcacgctcatctgcacgttctggaag 273 |||||||||||||||| | |||||||||||||||||||||||| ||||| || ||||| Sbjct: 101859 tgccaattcttcttcaaaagagagacaaggaagttcacgctcatttgcacattttggaaa 101800 Query: 274 atctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttc 333 || ||||||||||||||| | || ||| || ||||||||||||||||| ||||||||| Sbjct: 101799 atttgcttctcctccatagcacagttgcctacagcaacacccatgcaaagaacctttttc 101740 Query: 334 aactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtga 393 | |||||||| || || ||||| ||||| ||||||||||||||||| || ||||||||| Sbjct: 101739 agttggaacttcactgtagccttagtctcgttaaccttggactcaagtgattcctggtga 101680 Query: 394 gacaccaaagttgg 407 | |||||| ||||| Sbjct: 101679 gtcaccaacgttgg 101666 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 175 tttcccattgtgctcttcaggtaca 199 |||||||| |||||||||||||||| Sbjct: 102271 tttcccatagtgctcttcaggtaca 102247
>dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0679C12 Length = 153666 Score = 174 bits (88), Expect = 1e-40 Identities = 167/194 (86%) Strand = Plus / Minus Query: 214 tgccaattcttcttcancanagagacaaggaagttcacgctcatctgcacgttctggaag 273 |||||||||||||||| | |||||||||||||||||||||||| ||||| || ||||| Sbjct: 64192 tgccaattcttcttcaaaagagagacaaggaagttcacgctcatttgcacattttggaaa 64133 Query: 274 atctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttc 333 || ||||||||||||||| | || ||| || ||||||||||||||||| ||||||||| Sbjct: 64132 atttgcttctcctccatagcacagttgcctacagcaacacccatgcaaagaacctttttc 64073 Query: 334 aactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtga 393 | |||||||| || || ||||| ||||| ||||||||||||||||| || ||||||||| Sbjct: 64072 agttggaacttcactgtagccttagtctcgttaaccttggactcaagtgattcctggtga 64013 Query: 394 gacaccaaagttgg 407 | |||||| ||||| Sbjct: 64012 gtcaccaacgttgg 63999 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 175 tttcccattgtgctcttcaggtaca 199 |||||||| |||||||||||||||| Sbjct: 64604 tttcccatagtgctcttcaggtaca 64580
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 167 bits (84), Expect = 4e-38 Identities = 166/194 (85%) Strand = Plus / Minus Query: 214 tgccaattcttcttcancanagagacaaggaagttcacgctcatctgcacgttctggaag 273 |||||||||||||||| | || |||||||||||||||||||||||||| || |||||| Sbjct: 12871054 tgccaattcttcttcaaaagggaaacaaggaagttcacgctcatctgcacattttggaag 12870995 Query: 274 atctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttc 333 |||||||||||||||||| | || |||||| |||||||||||||| || ||||| ||| Sbjct: 12870994 atctgcttctcctccatagcacagttgccaacagcaacacccatgcagagaaccttcttc 12870935 Query: 334 aactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtga 393 | |||||| || || || ||||| ||||||||||||||||||||||| || ||||| || Sbjct: 12870934 agctggaatttcactgtagccttagtctcattaaccttggactcaagtgattcctgatgc 12870875 Query: 394 gacaccaaagttgg 407 | ||||| |||||| Sbjct: 12870874 gtcaccagagttgg 12870861 Score = 54.0 bits (27), Expect = 4e-04 Identities = 43/49 (87%) Strand = Plus / Minus Query: 157 tagaacaaccggtacanntttcccattgtgctcttcaggtacaggcacc 205 ||||||| ||||||| |||||||| |||||||||||||||| ||||| Sbjct: 12871218 tagaacactcggtacacctttcccatggtgctcttcaggtacaagcacc 12871170
>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A18 Length = 176755 Score = 167 bits (84), Expect = 4e-38 Identities = 166/194 (85%) Strand = Plus / Minus Query: 214 tgccaattcttcttcancanagagacaaggaagttcacgctcatctgcacgttctggaag 273 |||||||||||||||| | || |||||||||||||||||||||||||| || |||||| Sbjct: 90536 tgccaattcttcttcaaaagggaaacaaggaagttcacgctcatctgcacattttggaag 90477 Query: 274 atctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttc 333 |||||||||||||||||| | || |||||| |||||||||||||| || ||||| ||| Sbjct: 90476 atctgcttctcctccatagcacagttgccaacagcaacacccatgcagagaaccttcttc 90417 Query: 334 aactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtga 393 | |||||| || || || ||||| ||||||||||||||||||||||| || ||||| || Sbjct: 90416 agctggaatttcactgtagccttagtctcattaaccttggactcaagtgattcctgatgc 90357 Query: 394 gacaccaaagttgg 407 | ||||| |||||| Sbjct: 90356 gtcaccagagttgg 90343 Score = 54.0 bits (27), Expect = 4e-04 Identities = 43/49 (87%) Strand = Plus / Minus Query: 157 tagaacaaccggtacanntttcccattgtgctcttcaggtacaggcacc 205 ||||||| ||||||| |||||||| |||||||||||||||| ||||| Sbjct: 90700 tagaacactcggtacacctttcccatggtgctcttcaggtacaagcacc 90652
>gb|BT012985.1| Lycopersicon esculentum clone 114201R, mRNA sequence Length = 895 Score = 155 bits (78), Expect = 1e-34 Identities = 201/243 (82%) Strand = Plus / Minus Query: 178 cccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanagag 237 ||||| |||||||||| ||||| ||||| |||| |||||||||||||| | | ||| Sbjct: 712 cccatggtgctcttcaagtacaagcaccttacgttctgccaattcttctttagaagagaa 653 Query: 238 acaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccagg 297 || | ||||||||||||||| ||||| ||||||||||| || ||||| |||||| | Sbjct: 652 actaagaagttcacgctcatttgcacattctggaagatttgtttctcttccatatcacaa 593 Query: 298 tggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggccttg 357 | ||||| ||||||||||||||||||||||| |||||||||||||||| || |||||| Sbjct: 592 ttaccaacagcaacacccatgcaaagcaccttcttcaactggaacttgatggtagccttg 533 Query: 358 gtctcattaaccttggactcaagggactcctggtgagacaccaaagttggaaactttcct 417 || ||||||||||| ||||| || ||||| ||||| || || | ||||||||||| ||| Sbjct: 532 gtttcattaaccttagactcgagtgactcttggtgggaaacaagggttggaaacttacct 473 Query: 418 gcc 420 ||| Sbjct: 472 gcc 470
>gb|BT016546.1| Zea mays clone Contig379 mRNA sequence Length = 937 Score = 127 bits (64), Expect = 3e-26 Identities = 178/217 (82%) Strand = Plus / Minus Query: 178 cccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanagag 237 ||||| |||||||| | ||| ||||| | ||| | ||||| |||||||||| | || Sbjct: 688 cccatggtgctcttgacgtagaggcatctcacattctgccagttcttcttcagaagggaa 629 Query: 238 acaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccagg 297 ||||||||||||||||||||||| | |||||| |||||||||||||||||| ||| | Sbjct: 628 acaaggaagttcacgctcatctggatgttctgctggatctgcttctcctccatcgccaag 569 Query: 298 tggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggccttg 357 | ||| ||||| || ||||||||||| ||||| || | |||||||||||| || ||||| Sbjct: 568 ttgccgacggcgacgcccatgcaaaggaccttcttgagctggaacttgacggttgcctta 509 Query: 358 gtctcattaaccttggactcaagggactcctggtgag 394 ||||| || |||||||| || ||||| |||||||||| Sbjct: 508 gtctcgttcaccttggattcgagggattcctggtgag 472
>gb|AY109405.1| Zea mays CL4809_1 mRNA sequence Length = 1296 Score = 127 bits (64), Expect = 3e-26 Identities = 178/217 (82%) Strand = Plus / Minus Query: 178 cccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanagag 237 ||||| |||||||| | ||| ||||| | ||| | ||||| |||||||||| | || Sbjct: 966 cccatggtgctcttgacgtagaggcatctcacattctgccagttcttcttcagaagggaa 907 Query: 238 acaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccagg 297 ||||||||||||||||||||||| | |||||| |||||||||||||||||| ||| | Sbjct: 906 acaaggaagttcacgctcatctggatgttctgctggatctgcttctcctccatcgccaag 847 Query: 298 tggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggccttg 357 | ||| ||||| || ||||||||||| ||||| || | |||||||||||| || ||||| Sbjct: 846 ttgccgacggcgacgcccatgcaaaggaccttcttgagctggaacttgacggttgcctta 787 Query: 358 gtctcattaaccttggactcaagggactcctggtgag 394 ||||| || |||||||| || ||||| |||||||||| Sbjct: 786 gtctcgttcaccttggattcgagggattcctggtgag 750
>ref|NM_100709.3| Arabidopsis thaliana structural constituent of ribosome AT1G08360 mRNA, complete cds Length = 930 Score = 125 bits (63), Expect = 1e-25 Identities = 177/216 (81%) Strand = Plus / Minus Query: 177 tcccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanaga 236 ||||||||||||||| ||||||| |||| || | |||||| |||||||||| | || Sbjct: 688 tcccattgtgctcttgaggtacaaacacctgacattttgccagttcttcttcaatagcga 629 Query: 237 gacaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 296 ||| |||||||| |||||||||||||| ||||| |||||||||||||| ||||| || Sbjct: 628 gacgaggaagttgacgctcatctgcacattctgaaagatctgcttctcttccattgaaag 569 Query: 297 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 356 || ||||| ||||| |||||||| || ||||| |||| ||||||||| || || ||||| Sbjct: 568 gttaccaactgcaactcccatgcacagaaccttcttcagctggaacttcactgttgcctt 509 Query: 357 ggtctcattaaccttggactcaagggactcctggtg 392 || ||||| ||||| ||||| | ||| |||||||| Sbjct: 508 tgtttcattcacctttgactccaaggattcctggtg 473
>gb|AY114542.1| Arabidopsis thaliana putative ribosomal protein L10 (At1g08360) mRNA, complete cds Length = 714 Score = 125 bits (63), Expect = 1e-25 Identities = 177/216 (81%) Strand = Plus / Minus Query: 177 tcccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanaga 236 ||||||||||||||| ||||||| |||| || | |||||| |||||||||| | || Sbjct: 630 tcccattgtgctcttgaggtacaaacacctgacattttgccagttcttcttcaatagcga 571 Query: 237 gacaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 296 ||| |||||||| |||||||||||||| ||||| |||||||||||||| ||||| || Sbjct: 570 gacgaggaagttgacgctcatctgcacattctgaaagatctgcttctcttccattgaaag 511 Query: 297 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 356 || ||||| ||||| |||||||| || ||||| |||| ||||||||| || || ||||| Sbjct: 510 gttaccaactgcaactcccatgcacagaaccttcttcagctggaacttcactgttgcctt 451 Query: 357 ggtctcattaaccttggactcaagggactcctggtg 392 || ||||| ||||| ||||| | ||| |||||||| Sbjct: 450 tgtttcattcacctttgactccaaggattcctggtg 415
>gb|AY065077.1| Arabidopsis thaliana putative ribosomal protein L10 (At1g08360; T27G7.6) mRNA, complete cds Length = 883 Score = 125 bits (63), Expect = 1e-25 Identities = 177/216 (81%) Strand = Plus / Minus Query: 177 tcccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanaga 236 ||||||||||||||| ||||||| |||| || | |||||| |||||||||| | || Sbjct: 684 tcccattgtgctcttgaggtacaaacacctgacattttgccagttcttcttcaatagcga 625 Query: 237 gacaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 296 ||| |||||||| |||||||||||||| ||||| |||||||||||||| ||||| || Sbjct: 624 gacgaggaagttgacgctcatctgcacattctgaaagatctgcttctcttccattgaaag 565 Query: 297 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 356 || ||||| ||||| |||||||| || ||||| |||| ||||||||| || || ||||| Sbjct: 564 gttaccaactgcaactcccatgcacagaaccttcttcagctggaacttcactgttgcctt 505 Query: 357 ggtctcattaaccttggactcaagggactcctggtg 392 || ||||| ||||| ||||| | ||| |||||||| Sbjct: 504 tgtttcattcacctttgactccaaggattcctggtg 469
>emb|BX814727.1|CNS0ACAP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB91ZC11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 870 Score = 125 bits (63), Expect = 1e-25 Identities = 177/216 (81%) Strand = Plus / Minus Query: 177 tcccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanaga 236 ||||||||||||||| ||||||| |||| || | |||||| |||||||||| | || Sbjct: 688 tcccattgtgctcttgaggtacaaacacctgacattttgccagttcttcttcaatagcga 629 Query: 237 gacaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 296 ||| |||||||| |||||||||||||| ||||| |||||||||||||| ||||| || Sbjct: 628 gacgaggaagttgacgctcatctgcacattctgaaagatctgcttctcttccattgaaag 569 Query: 297 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 356 || ||||| ||||| |||||||| || ||||| |||| ||||||||| || || ||||| Sbjct: 568 gttaccaactgcaactcccatgcacagaaccttcttcagctggaacttcactgttgcctt 509 Query: 357 ggtctcattaaccttggactcaagggactcctggtg 392 || ||||| ||||| ||||| | ||| |||||||| Sbjct: 508 tgtttcattcacctttgactccaaggattcctggtg 473
>emb|BX816002.1|CNS0ABUG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH22ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 840 Score = 125 bits (63), Expect = 1e-25 Identities = 177/216 (81%) Strand = Plus / Minus Query: 177 tcccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanaga 236 ||||||||||||||| ||||||| |||| || | |||||| |||||||||| | || Sbjct: 660 tcccattgtgctcttgaggtacaaacacctgacattttgccagttcttcttcaatagcga 601 Query: 237 gacaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 296 ||| |||||||| |||||||||||||| ||||| |||||||||||||| ||||| || Sbjct: 600 gacgaggaagttgacgctcatctgcacattctgaaagatctgcttctcttccattgaaag 541 Query: 297 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 356 || ||||| ||||| |||||||| || ||||| |||| ||||||||| || || ||||| Sbjct: 540 gttaccaactgcaactcccatgcacagaaccttcttcagctggaacttcactgttgcctt 481 Query: 357 ggtctcattaaccttggactcaagggactcctggtg 392 || ||||| ||||| ||||| | ||| |||||||| Sbjct: 480 tgtttcattcacctttgactccaaggattcctggtg 445
>emb|BX841788.1|CNS09Y5M Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB6ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 847 Score = 125 bits (63), Expect = 1e-25 Identities = 177/216 (81%) Strand = Plus / Minus Query: 177 tcccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanaga 236 ||||||||||||||| ||||||| |||| || | |||||| |||||||||| | || Sbjct: 667 tcccattgtgctcttgaggtacaaacacctgacattttgccagttcttcttcaatagcga 608 Query: 237 gacaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 296 ||| |||||||| |||||||||||||| ||||| |||||||||||||| ||||| || Sbjct: 607 gacgaggaagttgacgctcatctgcacattctgaaagatctgcttctcttccattgaaag 548 Query: 297 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 356 || ||||| ||||| |||||||| || ||||| |||| ||||||||| || || ||||| Sbjct: 547 gttaccaactgcaactcccatgcacagaaccttcttcagctggaacttcactgttgcctt 488 Query: 357 ggtctcattaaccttggactcaagggactcctggtg 392 || ||||| ||||| ||||| | ||| |||||||| Sbjct: 487 tgtttcattcacctttgactccaaggattcctggtg 452
>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I, complete sequence Length = 89479 Score = 125 bits (63), Expect = 1e-25 Identities = 177/216 (81%) Strand = Plus / Minus Query: 177 tcccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanaga 236 ||||||||||||||| ||||||| |||| || | |||||| |||||||||| | || Sbjct: 18507 tcccattgtgctcttgaggtacaaacacctgacattttgccagttcttcttcaatagcga 18448 Query: 237 gacaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 296 ||| |||||||| |||||||||||||| ||||| |||||||||||||| ||||| || Sbjct: 18447 gacgaggaagttgacgctcatctgcacattctgaaagatctgcttctcttccattgaaag 18388 Query: 297 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 356 || ||||| ||||| |||||||| || ||||| |||| ||||||||| || || ||||| Sbjct: 18387 gttaccaactgcaactcccatgcacagaaccttcttcagctggaacttcactgttgcctt 18328 Query: 357 ggtctcattaaccttggactcaagggactcctggtg 392 || ||||| ||||| ||||| | ||| |||||||| Sbjct: 18327 tgtttcattcacctttgactccaaggattcctggtg 18292
>ref|NM_179773.1| Arabidopsis thaliana structural constituent of ribosome AT2G27530 transcript variant AT2G27530.2 mRNA, complete cds Length = 904 Score = 123 bits (62), Expect = 5e-25 Identities = 161/195 (82%) Strand = Plus / Minus Query: 177 tcccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanaga 236 |||||| |||||||||| ||||| |||| |||| ||||||||||||||||| | || Sbjct: 695 tcccatggtgctcttcaagtacaaacaccttacgttttgccaattcttcttcaagagcga 636 Query: 237 gacaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 296 ||| |||||||| || ||||||||||| |||||||||| ||||||||| ||||| || Sbjct: 635 gacgaggaagttaacactcatctgcacattctggaagagctgcttctcttccatggaaag 576 Query: 297 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 356 || ||||| ||||||||||| || || || || |||||||||||||| || || || || Sbjct: 575 gttaccaacagcaacacccatacacagaactttcttcaactggaacttcactgttgcttt 516 Query: 357 ggtctcattaacctt 371 ||||||||| ||||| Sbjct: 515 ggtctcattcacctt 501
>ref|NM_128313.2| Arabidopsis thaliana structural constituent of ribosome AT2G27530 transcript variant AT2G27530.1 mRNA, complete cds Length = 935 Score = 123 bits (62), Expect = 5e-25 Identities = 161/195 (82%) Strand = Plus / Minus Query: 177 tcccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanaga 236 |||||| |||||||||| ||||| |||| |||| ||||||||||||||||| | || Sbjct: 726 tcccatggtgctcttcaagtacaaacaccttacgttttgccaattcttcttcaagagcga 667 Query: 237 gacaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 296 ||| |||||||| || ||||||||||| |||||||||| ||||||||| ||||| || Sbjct: 666 gacgaggaagttaacactcatctgcacattctggaagagctgcttctcttccatggaaag 607 Query: 297 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 356 || ||||| ||||||||||| || || || || |||||||||||||| || || || || Sbjct: 606 gttaccaacagcaacacccatacacagaactttcttcaactggaacttcactgttgcttt 547 Query: 357 ggtctcattaacctt 371 ||||||||| ||||| Sbjct: 546 ggtctcattcacctt 532
>gb|AY056371.1| Arabidopsis thaliana putative 60S ribosomal protein L10A (At2g27530) mRNA, complete cds Length = 682 Score = 123 bits (62), Expect = 5e-25 Identities = 161/195 (82%) Strand = Plus / Minus Query: 177 tcccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanaga 236 |||||| |||||||||| ||||| |||| |||| ||||||||||||||||| | || Sbjct: 630 tcccatggtgctcttcaagtacaaacaccttacgttttgccaattcttcttcaagagcga 571 Query: 237 gacaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 296 ||| |||||||| || ||||||||||| |||||||||| ||||||||| ||||| || Sbjct: 570 gacgaggaagttaacactcatctgcacattctggaagagctgcttctcttccatggaaag 511 Query: 297 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 356 || ||||| ||||||||||| || || || || |||||||||||||| || || || || Sbjct: 510 gttaccaacagcaacacccatacacagaactttcttcaactggaacttcactgttgcttt 451 Query: 357 ggtctcattaacctt 371 ||||||||| ||||| Sbjct: 450 ggtctcattcacctt 436
>gb|AF360146.1| Arabidopsis thaliana putative 60S ribosomal protein L10A (At2g27530) mRNA, complete cds Length = 916 Score = 123 bits (62), Expect = 5e-25 Identities = 161/195 (82%) Strand = Plus / Minus Query: 177 tcccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanaga 236 |||||| |||||||||| ||||| |||| |||| ||||||||||||||||| | || Sbjct: 691 tcccatggtgctcttcaagtacaaacaccttacgttttgccaattcttcttcaagagcga 632 Query: 237 gacaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 296 ||| |||||||| || ||||||||||| |||||||||| ||||||||| ||||| || Sbjct: 631 gacgaggaagttaacactcatctgcacattctggaagagctgcttctcttccatggaaag 572 Query: 297 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 356 || ||||| ||||||||||| || || || || |||||||||||||| || || || || Sbjct: 571 gttaccaacagcaacacccatacacagaactttcttcaactggaacttcactgttgcttt 512 Query: 357 ggtctcattaacctt 371 ||||||||| ||||| Sbjct: 511 ggtctcattcacctt 497
>gb|AY081263.1| Arabidopsis thaliana 60S ribosomal protein L10A (At2g27530) mRNA, complete cds Length = 891 Score = 123 bits (62), Expect = 5e-25 Identities = 161/195 (82%) Strand = Plus / Minus Query: 177 tcccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanaga 236 |||||| |||||||||| ||||| |||| |||| ||||||||||||||||| | || Sbjct: 726 tcccatggtgctcttcaagtacaaacaccttacgttttgccaattcttcttcaagagcga 667 Query: 237 gacaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 296 ||| |||||||| || ||||||||||| |||||||||| ||||||||| ||||| || Sbjct: 666 gacgaggaagttaacactcatctgcacattctggaagagctgcttctcttccatggaaag 607 Query: 297 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 356 || ||||| ||||||||||| || || || || |||||||||||||| || || || || Sbjct: 606 gttaccaacagcaacacccatacacagaactttcttcaactggaacttcactgttgcttt 547 Query: 357 ggtctcattaacctt 371 ||||||||| ||||| Sbjct: 546 ggtctcattcacctt 532
>gb|BT006262.1| Arabidopsis thaliana At2g27530 mRNA, complete cds Length = 651 Score = 123 bits (62), Expect = 5e-25 Identities = 161/195 (82%) Strand = Plus / Minus Query: 177 tcccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanaga 236 |||||| |||||||||| ||||| |||| |||| ||||||||||||||||| | || Sbjct: 630 tcccatggtgctcttcaagtacaaacaccttacgttttgccaattcttcttcaagagcga 571 Query: 237 gacaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 296 ||| |||||||| || ||||||||||| |||||||||| ||||||||| ||||| || Sbjct: 570 gacgaggaagttaacactcatctgcacattctggaagagctgcttctcttccatggaaag 511 Query: 297 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 356 || ||||| ||||||||||| || || || || |||||||||||||| || || || || Sbjct: 510 gttaccaacagcaacacccatacacagaactttcttcaactggaacttcactgttgcttt 451 Query: 357 ggtctcattaacctt 371 ||||||||| ||||| Sbjct: 450 ggtctcattcacctt 436
>emb|BX820970.1|CNS0A84X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH87ZC06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 840 Score = 123 bits (62), Expect = 5e-25 Identities = 161/195 (82%) Strand = Plus / Minus Query: 177 tcccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanaga 236 |||||| |||||||||| ||||| |||| |||| ||||||||||||||||| | || Sbjct: 669 tcccatggtgctcttcaagtacaaacaccttacgttttgccaattcttcttcaagagcga 610 Query: 237 gacaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 296 ||| |||||||| || ||||||||||| |||||||||| ||||||||| ||||| || Sbjct: 609 gacgaggaagttaacactcatctgcacattctggaagagctgcttctcttccatggaaag 550 Query: 297 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 356 || ||||| ||||||||||| || || || || |||||||||||||| || || || || Sbjct: 549 gttaccaacagcaacacccatacacagaactttcttcaactggaacttcactgttgcttt 490 Query: 357 ggtctcattaacctt 371 ||||||||| ||||| Sbjct: 489 ggtctcattcacctt 475
>ref|XM_483755.1| Oryza sativa (japonica cultivar-group), mRNA Length = 936 Score = 115 bits (58), Expect = 1e-22 Identities = 196/243 (80%) Strand = Plus / Minus Query: 178 cccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanagag 237 ||||||||||| || | ||||||||||| ||| | ||||| |||||||||| | || Sbjct: 703 cccattgtgcttttgatgtacaggcacctcacattctgccagttcttcttcaaaagggac 644 Query: 238 acaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccagg 297 || |||||||| |||||||| || | ||| || |||||||||||||||||| || | Sbjct: 643 acgaggaagttgacgctcatttggatgttttgctggatctgcttctcctccatcgacaag 584 Query: 298 tggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggccttg 357 | || || |||||||||||||| || ||||| |||| |||||||||||| || || || Sbjct: 583 ttacccacagcaacacccatgcacagaaccttcttcagctggaacttgactgtagctttc 524 Query: 358 gtctcattaaccttggactcaagggactcctggtgagacaccaaagttggaaactttcct 417 |||||||| |||||||| ||||| ||||||||||||| ||||| || || ||||| ||| Sbjct: 523 gtctcattgaccttggattcaagagactcctggtgagtaaccaatgtagggaacttgcct 464 Query: 418 gcc 420 ||| Sbjct: 463 gcc 461
>emb|BX818761.1|CNS0A9SM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB10ZC01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 850 Score = 115 bits (58), Expect = 1e-22 Identities = 160/195 (82%) Strand = Plus / Minus Query: 177 tcccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanaga 236 |||||| |||||||||| ||||| |||| |||| ||||||||||||||||| | || Sbjct: 669 tcccatggtgctcttcaagtacaaacaccttacgttttgccaattcttcttcaagagcga 610 Query: 237 gacaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 296 ||| |||||||| | ||||||||||| |||||||||| ||||||||| ||||| || Sbjct: 609 gacgaggaagttaaaactcatctgcacattctggaagagctgcttctcttccatggaaag 550 Query: 297 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 356 || ||||| ||||||||||| || || || || |||||||||||||| || || || || Sbjct: 549 gttaccaacagcaacacccatacacagaactttcttcaactggaacttcactgttgcttt 490 Query: 357 ggtctcattaacctt 371 ||||||||| ||||| Sbjct: 489 ggtctcattcacctt 475
>dbj|AK061522.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-B06, full insert sequence Length = 936 Score = 115 bits (58), Expect = 1e-22 Identities = 196/243 (80%) Strand = Plus / Minus Query: 178 cccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanagag 237 ||||||||||| || | ||||||||||| ||| | ||||| |||||||||| | || Sbjct: 703 cccattgtgcttttgatgtacaggcacctcacattctgccagttcttcttcaaaagggac 644 Query: 238 acaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccagg 297 || |||||||| |||||||| || | ||| || |||||||||||||||||| || | Sbjct: 643 acgaggaagttgacgctcatttggatgttttgctggatctgcttctcctccatcgacaag 584 Query: 298 tggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggccttg 357 | || || |||||||||||||| || ||||| |||| |||||||||||| || || || Sbjct: 583 ttacccacagcaacacccatgcacagaaccttcttcagctggaacttgactgtagctttc 524 Query: 358 gtctcattaaccttggactcaagggactcctggtgagacaccaaagttggaaactttcct 417 |||||||| |||||||| ||||| ||||||||||||| ||||| || || ||||| ||| Sbjct: 523 gtctcattgaccttggattcaagagactcctggtgagtaaccaatgtagggaacttgcct 464 Query: 418 gcc 420 ||| Sbjct: 463 gcc 461
>gb|AC006232.4| Arabidopsis thaliana chromosome 2 clone F10A12 map B68, complete sequence Length = 90341 Score = 109 bits (55), Expect = 7e-21 Identities = 136/164 (82%) Strand = Plus / Plus Query: 208 acgtnttgccaattcttcttcancanagagacaaggaagttcacgctcatctgcacgttc 267 |||| ||||||||||||||||| | ||||| |||||||| || ||||||||||| ||| Sbjct: 68580 acgttttgccaattcttcttcaagagcgagacgaggaagttaacactcatctgcacattc 68639 Query: 268 tggaagatctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacc 327 ||||||| ||||||||| ||||| |||| ||||| ||||||||||| || || || Sbjct: 68640 tggaagagctgcttctcttccatggaaaggttaccaacagcaacacccatacacagaact 68699 Query: 328 tttttcaactggaacttgacagtggccttggtctcattaacctt 371 || |||||||||||||| || || || ||||||||||| ||||| Sbjct: 68700 ttcttcaactggaacttcactgttgctttggtctcattcacctt 68743
>gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 map B68, complete sequence Length = 118196 Score = 109 bits (55), Expect = 7e-21 Identities = 136/164 (82%) Strand = Plus / Minus Query: 208 acgtnttgccaattcttcttcancanagagacaaggaagttcacgctcatctgcacgttc 267 |||| ||||||||||||||||| | ||||| |||||||| || ||||||||||| ||| Sbjct: 116093 acgttttgccaattcttcttcaagagcgagacgaggaagttaacactcatctgcacattc 116034 Query: 268 tggaagatctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacc 327 ||||||| ||||||||| ||||| |||| ||||| ||||||||||| || || || Sbjct: 116033 tggaagagctgcttctcttccatggaaaggttaccaacagcaacacccatacacagaact 115974 Query: 328 tttttcaactggaacttgacagtggccttggtctcattaacctt 371 || |||||||||||||| || || || ||||||||||| ||||| Sbjct: 115973 ttcttcaactggaacttcactgttgctttggtctcattcacctt 115930
>gb|AY846821.1| Triticum aestivum ribosomal protein L10A mRNA, complete cds Length = 788 Score = 107 bits (54), Expect = 3e-20 Identities = 195/243 (80%) Strand = Plus / Minus Query: 178 cccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanagag 237 ||||| |||||||||| ||||||||||| ||| | |||||||||||||||| | || Sbjct: 700 cccatggtgctcttcacgtacaggcacctcacattctgccaattcttcttcaggagggac 641 Query: 238 acaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccagg 297 ||||||||||| || ||||| || | ||| || |||||||||||| ||||| || | Sbjct: 640 acaaggaagttgacactcatttggatgttttgttggatctgcttctcgtccatcgacaag 581 Query: 298 tggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggccttg 357 | ||| || ||||||||||||||||| ||||| || | |||||||||||| || || || Sbjct: 580 ttgcccacagcaacacccatgcaaagaaccttctttagctggaacttgactgtagctttt 521 Query: 358 gtctcattaaccttggactcaagggactcctggtgagacaccaaagttggaaactttcct 417 ||||| || ||||||| ||||| || ||||||||| |||| ||| |||||||| ||| Sbjct: 520 gtctcgttgaccttggcttcaagagattcctggtgactaaccagagtgggaaacttgcct 461 Query: 418 gcc 420 ||| Sbjct: 460 gcc 458
>gb|AY104248.1| Zea mays PCO114889 mRNA sequence Length = 1019 Score = 105 bits (53), Expect = 1e-19 Identities = 168/207 (81%) Strand = Plus / Minus Query: 214 tgccaattcttcttcancanagagacaaggaagttcacgctcatctgcacgttctggaag 273 ||||| |||||||||| | ||| || |||||||| | ||||||||| | |||||| | Sbjct: 663 tgccagttcttcttcagaagagacacgaggaagttgatgctcatctggatgttctgttgg 604 Query: 274 atctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttc 333 |||||||||||||||||| ||||| || || || |||||||||||||| || || ||| Sbjct: 603 atctgcttctcctccatagacaggttaccgaccgcgacacccatgcaaaggactttcttc 544 Query: 334 aactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtga 393 | || |||||||| || ||||| |||||||| |||||||| || ||||| ||||||||| Sbjct: 543 agttgaaacttgactgtagccttcgtctcattcaccttggattccagggattcctggtga 484 Query: 394 gacaccaaagttggaaactttcctgcc 420 | |||| ||| || ||||| |||||| Sbjct: 483 gtgaccagagtggggaacttgcctgcc 457
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 95.6 bits (48), Expect = 1e-16 Identities = 166/206 (80%) Strand = Plus / Minus Query: 214 tgccaattcttcttcancanagagacaaggaagttcacgctcatctgcacgttctggaag 273 ||||| |||||||||| | || || |||||||| |||||||| || | ||| || | Sbjct: 27924075 tgccagttcttcttcaaaagggacacgaggaagttgacgctcatttggatgttttgctgg 27924016 Query: 274 atctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttc 333 ||||||||||||||||| || || || || |||||||||||||| || ||||| ||| Sbjct: 27924015 atctgcttctcctccatcgacaagttacccacagcaacacccatgcacagaaccttcttc 27923956 Query: 334 aactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtga 393 | |||||||||||| || || || |||||||| |||||||| ||||| |||||||||||| Sbjct: 27923955 agctggaacttgactgtagctttcgtctcattgaccttggattcaagagactcctggtga 27923896 Query: 394 gacaccaaagttggaaactttcctgc 419 | ||||| || || ||||| ||||| Sbjct: 27923895 gtaaccaatgtagggaacttgcctgc 27923870 Score = 85.7 bits (43), Expect = 1e-13 Identities = 121/147 (82%) Strand = Plus / Minus Query: 273 gatctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcaccttttt 332 |||||||||||||||||| || || || || |||||||||||||| || ||||| || Sbjct: 27957744 gatctgcttctcctccattgacaagttacccacagcaacacccatgcacagaaccttctt 27957685 Query: 333 caactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtg 392 || |||||||||||| || || || ||||| || |||||||| ||||| ||||||||||| Sbjct: 27957684 cagctggaacttgactgtagctttcgtctcgttgaccttggattcaagagactcctggtg 27957625 Query: 393 agacaccaaagttggaaactttcctgc 419 || ||||| || || ||||| ||||| Sbjct: 27957624 agtaaccaatgtagggaacttgcctgc 27957598
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 95.6 bits (48), Expect = 1e-16 Identities = 166/206 (80%) Strand = Plus / Minus Query: 214 tgccaattcttcttcancanagagacaaggaagttcacgctcatctgcacgttctggaag 273 ||||| |||||||||| | || || |||||||| |||||||| || | ||| || | Sbjct: 1567 tgccagttcttcttcaaaagggacacgaggaagttgacgctcatttggatgttttgctgg 1508 Query: 274 atctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttc 333 ||||||||||||||||| || || || || |||||||||||||| || ||||| ||| Sbjct: 1507 atctgcttctcctccatcgacaagttacccacagcaacacccatgcacagaaccttcttc 1448 Query: 334 aactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtga 393 | |||||||||||| || || || |||||||| |||||||| ||||| |||||||||||| Sbjct: 1447 agctggaacttgactgtagctttcgtctcattgaccttggattcaagagactcctggtga 1388 Query: 394 gacaccaaagttggaaactttcctgc 419 | ||||| || || ||||| ||||| Sbjct: 1387 gtaaccaatgtagggaacttgcctgc 1362 Score = 85.7 bits (43), Expect = 1e-13 Identities = 121/147 (82%) Strand = Plus / Minus Query: 273 gatctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcaccttttt 332 |||||||||||||||||| || || || || |||||||||||||| || ||||| || Sbjct: 35236 gatctgcttctcctccattgacaagttacccacagcaacacccatgcacagaaccttctt 35177 Query: 333 caactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtg 392 || |||||||||||| || || || ||||| || |||||||| ||||| ||||||||||| Sbjct: 35176 cagctggaacttgactgtagctttcgtctcgttgaccttggattcaagagactcctggtg 35117 Query: 393 agacaccaaagttggaaactttcctgc 419 || ||||| || || ||||| ||||| Sbjct: 35116 agtaaccaatgtagggaacttgcctgc 35090
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 95.6 bits (48), Expect = 1e-16 Identities = 166/206 (80%) Strand = Plus / Minus Query: 214 tgccaattcttcttcancanagagacaaggaagttcacgctcatctgcacgttctggaag 273 ||||| |||||||||| | || || |||||||| |||||||| || | ||| || | Sbjct: 132153 tgccagttcttcttcaaaagggacacgaggaagttgacgctcatttggatgttttgctgg 132094 Query: 274 atctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttc 333 ||||||||||||||||| || || || || |||||||||||||| || ||||| ||| Sbjct: 132093 atctgcttctcctccatcgacaagttacccacagcaacacccatgcacagaaccttcttc 132034 Query: 334 aactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtga 393 | |||||||||||| || || || |||||||| |||||||| ||||| |||||||||||| Sbjct: 132033 agctggaacttgactgtagctttcgtctcattgaccttggattcaagagactcctggtga 131974 Query: 394 gacaccaaagttggaaactttcctgc 419 | ||||| || || ||||| ||||| Sbjct: 131973 gtaaccaatgtagggaacttgcctgc 131948
>ref|XM_483761.1| Oryza sativa (japonica cultivar-group), mRNA Length = 937 Score = 91.7 bits (46), Expect = 2e-15 Identities = 193/243 (79%) Strand = Plus / Minus Query: 178 cccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanagag 237 ||||| |||||||| | ||| ||||||| ||| | ||||| ||||| |||| | || Sbjct: 699 cccatggtgctcttgatgtaaaggcacctcacattctgccagttctttttcaaaagggac 640 Query: 238 acaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccagg 297 || |||||||| |||||||| || | ||| || |||||||||||||||||| || | Sbjct: 639 acgaggaagttgacgctcatttggatgttttgctggatctgcttctcctccattgacaag 580 Query: 298 tggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggccttg 357 | || || |||||||||||||| || ||||| |||| |||||||||||| || || || Sbjct: 579 ttacccacagcaacacccatgcacagaaccttcttcagctggaacttgactgtagctttc 520 Query: 358 gtctcattaaccttggactcaagggactcctggtgagacaccaaagttggaaactttcct 417 ||||| || |||||||| ||||| ||||||||||||| ||||| || || ||||| ||| Sbjct: 519 gtctcgttgaccttggattcaagagactcctggtgagtaaccaatgtagggaacttgcct 460 Query: 418 gcc 420 ||| Sbjct: 459 gcc 457
>dbj|AK122095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125C22, full insert sequence Length = 937 Score = 91.7 bits (46), Expect = 2e-15 Identities = 193/243 (79%) Strand = Plus / Minus Query: 178 cccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanagag 237 ||||| |||||||| | ||| ||||||| ||| | ||||| ||||| |||| | || Sbjct: 699 cccatggtgctcttgatgtaaaggcacctcacattctgccagttctttttcaaaagggac 640 Query: 238 acaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccagg 297 || |||||||| |||||||| || | ||| || |||||||||||||||||| || | Sbjct: 639 acgaggaagttgacgctcatttggatgttttgctggatctgcttctcctccattgacaag 580 Query: 298 tggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggccttg 357 | || || |||||||||||||| || ||||| |||| |||||||||||| || || || Sbjct: 579 ttacccacagcaacacccatgcacagaaccttcttcagctggaacttgactgtagctttc 520 Query: 358 gtctcattaaccttggactcaagggactcctggtgagacaccaaagttggaaactttcct 417 ||||| || |||||||| ||||| ||||||||||||| ||||| || || ||||| ||| Sbjct: 519 gtctcgttgaccttggattcaagagactcctggtgagtaaccaatgtagggaacttgcct 460 Query: 418 gcc 420 ||| Sbjct: 459 gcc 457
>dbj|AK071249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088C14, full insert sequence Length = 982 Score = 91.7 bits (46), Expect = 2e-15 Identities = 193/243 (79%) Strand = Plus / Minus Query: 178 cccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanagag 237 ||||| |||||||| | ||| ||||||| ||| | ||||| ||||| |||| | || Sbjct: 771 cccatggtgctcttgatgtaaaggcacctcacattctgccagttctttttcaaaagggac 712 Query: 238 acaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccagg 297 || |||||||| |||||||| || | ||| || |||||||||||||||||| || | Sbjct: 711 acgaggaagttgacgctcatttggatgttttgctggatctgcttctcctccattgacaag 652 Query: 298 tggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggccttg 357 | || || |||||||||||||| || ||||| |||| |||||||||||| || || || Sbjct: 651 ttacccacagcaacacccatgcacagaaccttcttcagctggaacttgactgtagctttc 592 Query: 358 gtctcattaaccttggactcaagggactcctggtgagacaccaaagttggaaactttcct 417 ||||| || |||||||| ||||| ||||||||||||| ||||| || || ||||| ||| Sbjct: 591 gtctcgttgaccttggattcaagagactcctggtgagtaaccaatgtagggaacttgcct 532 Query: 418 gcc 420 ||| Sbjct: 531 gcc 529
>gb|AY389626.1| Hyacinthus orientalis 60S ribosomal protein L10A (RPL10A) mRNA, partial cds Length = 756 Score = 89.7 bits (45), Expect = 7e-15 Identities = 195/246 (79%) Strand = Plus / Minus Query: 175 tttcccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancana 234 |||||||| ||||||||||||| || ||| || || | ||||||||||||||||| || | Sbjct: 583 tttcccatggtgctcttcaggtgcaagcatcggacattttgccaattcttcttcagcaaa 524 Query: 235 gagacaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccataccc 294 || || |||||||| || || | || || ||||| |||||||| || || ||||| || Sbjct: 523 gataccaggaagttgacactgagttgtacattctgaaagatctgtttttcttccatcccg 464 Query: 295 aggtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcc 354 || ||||| ||||||||||||||||| || || || | ||| ||||| || | || Sbjct: 463 cagtttccaacagcaacacccatgcaaagaactttcttgagctgaaacttaaccattgct 404 Query: 355 ttggtctcattaaccttggactcaagggactcctggtgagacaccaaagttggaaacttt 414 ||||| |||||||| || | ||| | ||| ||||| |||| |||||| || ||||||||| Sbjct: 403 ttggtttcattaactttcgcctccaaggattcctgatgagtcaccaatgtaggaaacttt 344 Query: 415 cctgcc 420 |||||| Sbjct: 343 cctgcc 338
>ref|NM_122149.3| Arabidopsis thaliana structural constituent of ribosome AT5G22440 mRNA, complete cds Length = 900 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/113 (84%) Strand = Plus / Minus Query: 178 cccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanagag 237 |||||||||||||||| ||||| ||||| ||| | |||||| || ||||||| | ||| Sbjct: 675 cccattgtgctcttcaagtacaagcacctcacattttgccagtttttcttcaagagagaa 616 Query: 238 acaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccat 290 || |||||||| || |||||||| || || || |||||||||||||||||||| Sbjct: 615 acgaggaagttaacactcatctgaacattttgaaagatctgcttctcctccat 563
>gb|AY077657.1| Arabidopsis thaliana AT5g22440/MWD9_24 mRNA, complete cds Length = 654 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/113 (84%) Strand = Plus / Minus Query: 178 cccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanagag 237 |||||||||||||||| ||||| ||||| ||| | |||||| || ||||||| | ||| Sbjct: 632 cccattgtgctcttcaagtacaagcacctcacattttgccagtttttcttcaagagagaa 573 Query: 238 acaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccat 290 || |||||||| || |||||||| || || || |||||||||||||||||||| Sbjct: 572 acgaggaagttaacactcatctgaacattttgaaagatctgcttctcctccat 520
>gb|AY037253.1| Arabidopsis thaliana AT5g22440/MWD9_24 mRNA, complete cds Length = 864 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/113 (84%) Strand = Plus / Minus Query: 178 cccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanagag 237 |||||||||||||||| ||||| ||||| ||| | |||||| || ||||||| | ||| Sbjct: 673 cccattgtgctcttcaagtacaagcacctcacattttgccagtttttcttcaagagagaa 614 Query: 238 acaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccat 290 || |||||||| || |||||||| || || || |||||||||||||||||||| Sbjct: 613 acgaggaagttaacactcatctgaacattttgaaagatctgcttctcctccat 561
>emb|BX829886.1|CNS0A1EM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB43ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 883 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/113 (84%) Strand = Plus / Minus Query: 178 cccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttcancanagag 237 |||||||||||||||| ||||| ||||| ||| | |||||| || ||||||| | ||| Sbjct: 658 cccattgtgctcttcaagtacaagcacctcacattttgccagtttttcttcaagagagaa 599 Query: 238 acaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccat 290 || |||||||| || |||||||| || || || |||||||||||||||||||| Sbjct: 598 acgaggaagttaacactcatctgaacattttgaaagatctgcttctcctccat 546
>gb|DQ160125.1| Taraxacum officinale TO97-3 (To97-3) mRNA, partial cds Length = 310 Score = 79.8 bits (40), Expect = 7e-12 Identities = 106/128 (82%) Strand = Plus / Minus Query: 265 ttctggaagatctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagc 324 |||||||||||||||||||| ||||| | || ||||| ||||| ||||| |||||| Sbjct: 293 ttctggaagatctgcttctcttccatgctgcagtttccaacagcaactcccatacaaagc 234 Query: 325 acctttttcaactggaacttgacagtggccttggtctcattaaccttggactcaagggac 384 ||| |||| |||||||||||||| || ||||||||||| ||||| | ||||||||| Sbjct: 233 acccccttcagttggaacttgacagttgctttggtctcattcacctttgcctcaagggat 174 Query: 385 tcctggtg 392 |||||||| Sbjct: 173 tcctggtg 166
>emb|BX832559.1|CNS0A14N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZB10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1299 Score = 73.8 bits (37), Expect = 4e-10 Identities = 95/114 (83%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 178 cccattgtgctcttcaggtacaggcaccg-cacgtnttgccaattcttcttcancanaga 236 |||||||||||||||| ||||| ||||| ||| | |||||| || ||||||| | ||| Sbjct: 1006 cccattgtgctcttcaagtacaagcaccatcacattttgccagtttttcttcaagagaga 947 Query: 237 gacaaggaagttcacgctcatctgcacgttctggaagatctgcttctcctccat 290 || |||||||| || |||||||| || || || |||||||||||||||||||| Sbjct: 946 aacgaggaagttaacactcatctgaacattttgaaagatctgcttctcctccat 893
>dbj|AP006415.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT37I11, TM0302a, complete sequence Length = 96704 Score = 71.9 bits (36), Expect = 2e-09 Identities = 145/182 (79%) Strand = Plus / Plus Query: 213 ttgccaattcttcttcancanagagacaaggaagttcacgctcatctgcacgttctggaa 272 |||||| ||||| |||| || ||||||||||||||| || |||| |||||||| || || Sbjct: 49555 ttgccagttctttttcaacaaagagacaaggaagttaacactcagttgcacgttttgaaa 49614 Query: 273 gatctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcaccttttt 332 |||||| || || ||||| | | | || ||||| || |||||||| ||||||||||| Sbjct: 49615 gatctgtttttcttccatgctaacattacccacggcgactcccatgcagagcaccttttt 49674 Query: 333 caactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtg 392 | ||| || ||||| | ||||| |||||||||||||| | |||||||| || ||||| Sbjct: 49675 gagctgaaatttgaccatagccttagtctcattaacctttgcttcaagggattcttggtg 49734 Query: 393 ag 394 || Sbjct: 49735 ag 49736
>emb|AJ439529.1|PSP439529 Polytomella sp. 'Pringsheim 198.80' mRNA for 60S ribosomal protein l10a (r10a gene) Length = 756 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 302 caacggcaacacccatgcaaagcacctttttcaactggaacttga 346 |||||||||||||||||||||| ||||| || | ||||||||||| Sbjct: 506 caacggcaacacccatgcaaagaaccttcttaagctggaacttga 462
>dbj|AB007651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD9 Length = 85421 Score = 56.0 bits (28), Expect = 9e-05 Identities = 65/78 (83%) Strand = Plus / Plus Query: 213 ttgccaattcttcttcancanagagacaaggaagttcacgctcatctgcacgttctggaa 272 |||||| || ||||||| | ||| || |||||||| || |||||||| || || || || Sbjct: 74401 ttgccagtttttcttcaagagagaaacgaggaagttaacactcatctgaacattttgaaa 74460 Query: 273 gatctgcttctcctccat 290 |||||||||||||||||| Sbjct: 74461 gatctgcttctcctccat 74478 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 cccattgtgctcttcaggtacaggcacc 205 |||||||||||||||| ||||| ||||| Sbjct: 74280 cccattgtgctcttcaagtacaagcacc 74307
>dbj|AK108883.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-D09, full insert sequence Length = 1289 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 310 acacccatgcaaagcacctttttcaactggaacttgacagtggccttggtctcatt 365 ||||||||||| |||||||| |||| ||||||||||| | |||||||||||||| Sbjct: 550 acacccatgcacagcaccttcttcagctggaacttgatggacgccttggtctcatt 495
>emb|AJ718244.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT4-13-142, cultivar Bright Yellow 2 Length = 107 Score = 56.0 bits (28), Expect = 9e-05 Identities = 48/55 (87%) Strand = Plus / Minus Query: 175 tttcccattgtgctcttcaggtacaggcaccgcacgtnttgccaattcttcttca 229 |||||||| |||||||||| ||||||||||| || | |||||||||||| |||| Sbjct: 93 tttcccatggtgctcttcaagtacaggcacctaacattttgccaattctttttca 39
>gb|DQ226619.1| Boechera divaricarpa isolate SLW-4-A06 mRNA sequence Length = 634 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 241 aggaagttcacgctcatctgcacgttctggaagatctgcttctcctccat 290 |||||||| || |||||||| || ||||| |||||||||||||| ||||| Sbjct: 596 aggaagttaacactcatctgaacattctgaaagatctgcttctcttccat 547
>ref|XM_362251.1| Magnaporthe grisea 70-15 hypothetical protein (MG04696.4) partial cds Length = 468 Score = 46.1 bits (23), Expect = 0.091 Identities = 38/43 (88%) Strand = Plus / Minus Query: 304 acggcaacacccatgcaaagcacctttttcaactggaacttga 346 ||||| ||||||||||| || ||||| |||| ||||||||||| Sbjct: 320 acggcgacacccatgcagagaaccttcttcagctggaacttga 278
>gb|AF175385.1|AF175385 Chlamydomonas reinhardtii 60S ribosomal protein L10a mRNA, complete cds Length = 688 Score = 46.1 bits (23), Expect = 0.091 Identities = 38/43 (88%) Strand = Plus / Minus Query: 304 acggcaacacccatgcaaagcacctttttcaactggaacttga 346 ||||| || |||||||| |||||||| |||| ||||||||||| Sbjct: 499 acggccacgcccatgcacagcaccttcttcagctggaacttga 457
>ref|XM_212679.3| PREDICTED: Rattus norvegicus similar to ribosomal protein L10a (LOC287782), mRNA Length = 1022 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Minus Query: 297 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttga 346 ||||||||||||||| ||| || |||||||| |||| ||||||||||| Sbjct: 828 gtggccaacggcaacggccagacacagcaccttcttcacctggaacttga 779
>emb|BX005154.6| Zebrafish DNA sequence from clone CH211-288G17 in linkage group 19, complete sequence Length = 164384 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 327 ctttttcaactggaacttgaca 348 |||||||||||||||||||||| Sbjct: 101104 ctttttcaactggaacttgaca 101083
>emb|CT033109.1| Platynereis dumerilii EST IB0AAA26CC06EM1 Length = 713 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 324 cacctttttcaactggaacttgacagtggccttg 357 ||||||||||| ||||||||||| ||||||||| Sbjct: 493 cacctttttcatctggaacttgatggtggccttg 460
>emb|CT033108.1| Platynereis dumerilii EST IB0AAA26CC06FM1 Length = 713 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 324 cacctttttcaactggaacttgacagtggccttg 357 ||||||||||| ||||||||||| ||||||||| Sbjct: 221 cacctttttcatctggaacttgatggtggccttg 254
>gb|AY392166.1| Scyliorhinus canicula ribosomal protein L10a-like mRNA, partial sequence Length = 553 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 agcacctttttcaactggaacttga 346 ||||||||||||| ||||||||||| Sbjct: 459 agcacctttttcatctggaacttga 435
>ref|XM_822741.1| Trypanosoma brucei TREU927 60S ribosomal protein L10a (Tb10.05.0220) partial mRNA Length = 645 Score = 42.1 bits (21), Expect = 1.4 Identities = 31/35 (88%) Strand = Plus / Minus Query: 214 tgccaattcttcttcancanagagacaaggaagtt 248 ||||| |||||||||| || ||| ||||||||||| Sbjct: 587 tgccagttcttcttcaacaaagacacaaggaagtt 553
>ref|XM_823942.1| Trypanosoma brucei TREU927 60S ribosomal protein L10a (Tb11.01.1470) partial mRNA Length = 645 Score = 42.1 bits (21), Expect = 1.4 Identities = 31/35 (88%) Strand = Plus / Minus Query: 214 tgccaattcttcttcancanagagacaaggaagtt 248 ||||| |||||||||| || ||| ||||||||||| Sbjct: 587 tgccagttcttcttcaacaaagacacaaggaagtt 553
>emb|AM049023.1| Georissus sp. APV-2005 mRNA for ribosomal protein L10Ae (rpL10e gene) Length = 654 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 318 gcaaagcacctttttcaactggaacttga 346 |||||| |||||||||| ||||||||||| Sbjct: 492 gcaaagtacctttttcatctggaacttga 464
>emb|AL138899.23| Human DNA sequence from clone RP11-404O13 on chromosome 1 Contains two novel genes, a elongation factor RNA polymerase II 2 (ELL2) pseudogene, the CD1D gene for CD1D antigen, d polypeptide and a ribosomal protein S10 (RPS10) pseudogene, complete sequence Length = 134137 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 atctgcttctcctccataccc 294 ||||||||||||||||||||| Sbjct: 16597 atctgcttctcctccataccc 16617
>emb|AL138749.13| Human DNA sequence from clone RP11-289F5 on chromosome 9q21.31-22.1 Contains a novel gene, complete sequence Length = 186246 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 ggataaaatgtcatgaagttc 25 ||||||||||||||||||||| Sbjct: 76256 ggataaaatgtcatgaagttc 76236
>gb|DQ066323.1| Ixodes scapularis isolate IS-6-12L-22 60S ribosomal protein L10a mRNA, complete cds Length = 654 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 318 gcaaagcacctttttcaactggaacttga 346 |||||||||||| |||| ||||||||||| Sbjct: 492 gcaaagcaccttcttcatctggaacttga 464
>emb|CT573502.2| Medicago truncatula chromosome 5 clone mte1-69f21, COMPLETE SEQUENCE Length = 89977 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 352 gccttggtctcattaaccttggactcaag 380 ||||| |||||||||||||||| |||||| Sbjct: 8670 gccttagtctcattaaccttggcctcaag 8642
>gb|U34620.1|TBU34620 Trypanosoma brucei rhodesiense NEDD-6 like protein mRNA, complete cds Length = 1276 Score = 42.1 bits (21), Expect = 1.4 Identities = 31/35 (88%) Strand = Plus / Minus Query: 214 tgccaattcttcttcancanagagacaaggaagtt 248 ||||| |||||||||| || ||| ||||||||||| Sbjct: 747 tgccagttcttcttcaacaaagacacaaggaagtt 713
>gb|AY695059.1| Rattus norvegicus A kinase anchoring protein 12 alpha (Akap12) gene, promoter region and exon 1 Length = 5071 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 taaccttggactcaagggactcct 388 ||||||||||||||||||| |||| Sbjct: 1146 taaccttggactcaagggaatcct 1169
>ref|XM_524639.1| PREDICTED: Pan troglodytes LOC469254 (LOC469254), mRNA Length = 1014 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 ttgacagtggccttggtctc 362 |||||||||||||||||||| Sbjct: 203 ttgacagtggccttggtctc 184
>emb|CR388067.9| Zebrafish DNA sequence from clone CH211-169K21 in linkage group 25, complete sequence Length = 163519 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tttttcaactggaacttgac 347 |||||||||||||||||||| Sbjct: 79699 tttttcaactggaacttgac 79680
>gb|AC122511.5| Mus musculus BAC clone RP24-446A8 from chromosome 6, complete sequence Length = 157847 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 aaagcaacaaaagttcccaa 119 |||||||||||||||||||| Sbjct: 10331 aaagcaacaaaagttcccaa 10350
>ref|XM_947712.1| Theileria annulata strain Ankara 60S ribosomal L1/L10a protein (TA09180) partial mRNA Length = 570 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 301 ccaacggcaacacccatgcaaagcacctttttcaactggaactt 344 ||||| ||||||||||| ||||| || || || ||||||||||| Sbjct: 422 ccaacagcaacacccatacaaagtactttctttaactggaactt 379
>gb|AC159140.10| Mus musculus chromosome 7, clone RP24-84I4, complete sequence Length = 202318 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 gcaacacccatgcaaagcac 326 |||||||||||||||||||| Sbjct: 22831 gcaacacccatgcaaagcac 22812
>emb|AL671862.6| Human DNA sequence from clone RP11-810H18 on chromosome 1, complete sequence Length = 62080 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 ttgacagtggccttggtctc 362 |||||||||||||||||||| Sbjct: 18051 ttgacagtggccttggtctc 18070
>gb|AC105008.5| Homo sapiens chromosome 8, clone CTD-2589E21, complete sequence Length = 172661 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ctcctccatacccaggtggc 301 |||||||||||||||||||| Sbjct: 143007 ctcctccatacccaggtggc 143026
>gb|AC104952.8| Homo sapiens chromosome 8, clone RP11-141J23, complete sequence Length = 190902 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ctcctccatacccaggtggc 301 |||||||||||||||||||| Sbjct: 3851 ctcctccatacccaggtggc 3870
>ref|XM_940320.1| PREDICTED: Homo sapiens similar to protein tyrosine phosphatase, receptor type, U isoform 2 precursor (LOC651195), mRNA Length = 2934 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 ttgacagtggccttggtctc 362 |||||||||||||||||||| Sbjct: 587 ttgacagtggccttggtctc 568
>ref|XM_372775.3| PREDICTED: Homo sapiens similar to protein tyrosine phosphatase, receptor type, U isoform 2 precursor (LOC391025), mRNA Length = 2745 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 ttgacagtggccttggtctc 362 |||||||||||||||||||| Sbjct: 587 ttgacagtggccttggtctc 568
>emb|AL831718.6| Mouse DNA sequence from clone RP23-146O20 on chromosome X, complete sequence Length = 116076 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 atcctagaagactagagtctagaa 161 ||||||||| |||||||||||||| Sbjct: 86831 atcctagaacactagagtctagaa 86808 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,444,438 Number of Sequences: 3902068 Number of extensions: 3444438 Number of successful extensions: 64511 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64309 Number of HSP's gapped (non-prelim): 178 length of query: 420 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 398 effective length of database: 17,147,199,772 effective search space: 6824585509256 effective search space used: 6824585509256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
