>Y933_METJA (Q58343) Hypothetical protein MJ0933|
          Length = 238

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
 Frame = -3

Query: 639 RRRSLDASGGAAGFAVMALHLA--CGYRYGALLLAFFFTSSKVTKIGEDRKRRVEEDFKE 466
           + R LD + G  G ++M   L   CG++Y  LLL+FF     V+++G ++K+  + D   
Sbjct: 28  KSRCLD-NEGVIGSSIMGFILLYFCGFKYLILLLSFFILGVLVSRVGLEKKKAKKMDETC 86

Query: 465 GGQRNWIQVLANSAIATVLVIVLAIMTGGQDQCLDSNGSKVITGIIGAIIGHY---CCCN 295
              +N   VLAN  I  +L  +LAI                  G   A+IG+        
Sbjct: 87  RSLKN---VLANGLIP-ILFAILAIF-----------------GFNWALIGYISSIAAAT 125

Query: 294 GDTWSSEIGVLSDEQPRLVTTLKVVSK 214
            DT+SSE+G+LS+E+PRL+TT +VV K
Sbjct: 126 SDTFSSELGILSNEKPRLITTFEVVEK 152

>Y875_SYNY3 (P73555) Hypothetical protein sll0875|
          Length = 258

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 2/163 (1%)
 Frame = -3

Query: 666 AFLIASGAVRRRSLDASGGAAGFAVMALHL--ACGYRYGALLLAFFFTSSKVTKIGEDRK 493
           +FL+A  A+  + L    G     V+ + +  A G+R   ++LA+FF  S VT+IG+  K
Sbjct: 26  SFLLALAAIAPKKLLTPWGYGHAWVLGVIIWAALGWRGYLVVLAYFFVGSAVTRIGQKEK 85

Query: 492 RRVEEDFKEGGQRNWIQVLANSAIATVLVIVLAIMTGGQDQCLDSNGSKVITGIIGAIIG 313
                  K  GQR    V  ++   T  +  LAI  G +   L          +    + 
Sbjct: 86  EAAGIAEKRSGQRGPENVWGSA--LTAALCALAIAFGPEPWQL---------WLALGYVA 134

Query: 312 HYCCCNGDTWSSEIGVLSDEQPRLVTTLKVVSKRGPTVTKISG 184
            +     DT +SE+G    +   L+TTL+ V +       + G
Sbjct: 135 SFSTKLSDTTASEVGKAYGKNTFLITTLQPVPRGTEGAVSVEG 177

>MDR_LEITA (P21441) Multidrug resistance protein (EC 3.6.3.44)|
           (P-glycoprotein)
          Length = 1548

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 24/76 (31%), Positives = 37/76 (48%)
 Frame = -3

Query: 507 GEDRKRRVEEDFKEGGQRNWIQVLANSAIATVLVIVLAIMTGGQDQCLDSNGSKVITGII 328
           GED K  VEE     G R + Q+++   +  V    L I  G     + S GS   T ++
Sbjct: 627 GEDEKGEVEE-----GDREYYQLVSKELLRNVS---LTIPKGKLTMVIGSTGSGKST-LL 677

Query: 327 GAIIGHYCCCNGDTWS 280
           GA++G Y   +G+ W+
Sbjct: 678 GALMGEYSVESGELWA 693

>LAML2_XENLA (P21910) Lamin-L(II)|
          Length = 623

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -3

Query: 531 TSSKVTKIGEDRKRRVEEDFKEGG 460
           +SS  T+    ++RRVEE+++EGG
Sbjct: 409 SSSSATRTSRSKRRRVEEEYEEGG 432

>INI2_PANTR (Q28808) Interferon-induced protein 6-16 precursor (Ifi-6-16)|
           (Interferon alpha-inducible protein 6)
          Length = 130

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 9/52 (17%)
 Frame = -3

Query: 438 LANSAIATVLVIVLAIMTGGQD---------QCLDSNGSKVITGIIGAIIGH 310
           +A +++A  L+   AI+ GG           Q L + GS VITG IGA++G+
Sbjct: 66  IAANSVAASLMSWSAILNGGGVPAGGLVATLQSLGAGGSSVITGNIGALMGY 117

>CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displacement protein)|
            (CDP) (Homeobox protein Clox) (Clox-1) (Fragment)
          Length = 975

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
 Frame = +3

Query: 543  PAAALRTYSRRQGGAPSRQTRQLRPRRLASAAGR----HPTRS----KRQGRHR 680
            PAAA R  SRR G     + R+ R RR A   GR     P R      R G HR
Sbjct: 854  PAAAARGPSRRPGARAKPRRRRRRRRRHARGGGRRYLSRPARGGPCRARDGAHR 907


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,865,470
Number of Sequences: 219361
Number of extensions: 2044564
Number of successful extensions: 6266
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6260
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6856295237
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)