Clone Name | rbasd24k05 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK065176.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D10, full insert sequence Length = 2389 Score = 541 bits (273), Expect = e-150 Identities = 490/562 (87%), Gaps = 3/562 (0%) Strand = Plus / Minus Query: 112 cctccgcttcctggatgatgtcctcgatcacagagtctctattcacagtttccctgcaca 171 |||| |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2142 cctcagcttcctggacgatgtcctcaatctcagagtctctattcacagtttccctgcaca 2083 Query: 172 gtatacgtcctatgtcatagggtgtgagacctcgcgcagcgcccttcttcangagcatgg 231 ||||||| || |||||||| |||||||| ||||| || || || ||||| | ||||||| Sbjct: 2082 gtatacgcccgatgtcatacggtgtgaggcctcgtgctgcacctttctttaaaagcatgg 2023 Query: 232 tgctgatgcgcaggacacgggcgcagctcgaagacagctcccacccgtggaacctgagaa 291 ||||||||| ||||||||| || || || | ||||||||||||||| |||||| |||||| Sbjct: 2022 tgctgatgcacaggacacgagcacatcttgcagacagctcccacccatggaacttgagaa 1963 Query: 292 gcttgatgtcctcttccgcgtcgagcgattcaatgtatgcaatggtttcattgctaaacc 351 |||||||||||||||| ||||| || |||| ||||||||||||||||||| || || Sbjct: 1962 gcttgatgtcctcttcagcgtctagtgatttgatgtatgcaatggtttcatcactgaatg 1903 Query: 352 gctcacgggcttgaggccagtaaagccactcaaaggtacaatcctcaaacttctctggca 411 | ||||| || || |||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 1902 gttcacgagcctggggccagtacagccactcaaaggtacaatcttcaaacttctctggca 1843 Query: 412 ggcaataaccatgatcaattggaatcagcttgcaggtggcaccatct---tccttggaca 468 ||| ||||||||||||||||||| || |||| | || |||| ||| |||||| ||| Sbjct: 1842 agcagtaaccatgatcaattggaaccaacttgtaattgccaccttcttcatccttgcaca 1783 Query: 469 ctagaatgttccctgcatgacgatcagcattcgctaacctaatatctaacactgctattt 528 ||| |||||||||||||||||||||||| || |||||||||| ||||||||||||||||| Sbjct: 1782 ctaaaatgttccctgcatgacgatcagcgtttgctaacctaagatctaacactgctattt 1723 Query: 529 tgtggacctccttcaccgggaaagcacgaggacccatgtcctcacaacttccatcgttct 588 |||||||||||||||| || || || || |||||||| |||||||||||||||| ||||| Sbjct: 1722 tgtggacctccttcactggaaatgctcggggacccatatcctcacaacttccattgttct 1663 Query: 589 ccataaacatctgcagagatccaaacttgaagctctttcccctatgtaagcttcggacta 648 || ||||||||||| ||||||| |||||||||||| ||||| |||||||| ||||| | Sbjct: 1662 gaatgaacatctgcagtgatccaatcttgaagctcttccccctgtgtaagctccggacca 1603 Query: 649 atgctgtgggaggcacaccaga 670 |||||||||||||||||||||| Sbjct: 1602 atgctgtgggaggcacaccaga 1581
>dbj|AK100224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047L02, full insert sequence Length = 2490 Score = 533 bits (269), Expect = e-148 Identities = 489/562 (87%), Gaps = 3/562 (0%) Strand = Plus / Minus Query: 112 cctccgcttcctggatgatgtcctcgatcacagagtctctattcacagtttccctgcaca 171 |||| |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2164 cctcggcttcctggacgatgtcctcaatctcagagtctctattcacagtttccctgcaca 2105 Query: 172 gtatacgtcctatgtcatagggtgtgagacctcgcgcagcgcccttcttcangagcatgg 231 ||||||| || |||||||| |||||||| ||||| || || || ||||| | ||||||| Sbjct: 2104 gtatacgcccgatgtcatacggtgtgaggcctcgtgctgcacctttctttaaaagcatgg 2045 Query: 232 tgctgatgcgcaggacacgggcgcagctcgaagacagctcccacccgtggaacctgagaa 291 ||||||||| ||||||||| || || || | ||||||||||||||| |||||| |||||| Sbjct: 2044 tgctgatgcacaggacacgagcacatcttgcagacagctcccacccatggaacttgagaa 1985 Query: 292 gcttgatgtcctcttccgcgtcgagcgattcaatgtatgcaatggtttcattgctaaacc 351 |||||||||||||||| ||||| || |||| ||||||||||||||||||| || || Sbjct: 1984 gcttgatgtcctcttcagcgtctagtgatttgatgtatgcaatggtttcatcactgaatg 1925 Query: 352 gctcacgggcttgaggccagtaaagccactcaaaggtacaatcctcaaacttctctggca 411 | ||||| || || |||||||| |||||||||||||||||||| ||||||||| |||||| Sbjct: 1924 gttcacgagcctggggccagtacagccactcaaaggtacaatcttcaaacttccctggca 1865 Query: 412 ggcaataaccatgatcaattggaatcagcttgcaggtggcaccatct---tccttggaca 468 ||| ||||||||||||||||||| || |||| | || |||| ||| |||||| ||| Sbjct: 1864 agcagtaaccatgatcaattggaaccaacttgtaattgccaccttcttcatccttgcaca 1805 Query: 469 ctagaatgttccctgcatgacgatcagcattcgctaacctaatatctaacactgctattt 528 ||| |||||||||||||||||||||||| || |||||||||| ||||||||||||||||| Sbjct: 1804 ctaaaatgttccctgcatgacgatcagcgtttgctaacctaagatctaacactgctattt 1745 Query: 529 tgtggacctccttcaccgggaaagcacgaggacccatgtcctcacaacttccatcgttct 588 |||||||||||||||| || || || || |||||||| |||||||||||||||| ||||| Sbjct: 1744 tgtggacctccttcactggaaatgctcggggacccatatcctcacaacttccattgttct 1685 Query: 589 ccataaacatctgcagagatccaaacttgaagctctttcccctatgtaagcttcggacta 648 || ||||||||||| ||||||| |||||||||||| ||||| |||||||| ||||| | Sbjct: 1684 gaatgaacatctgcagtgatccaatcttgaagctcttccccctgtgtaagctccggacca 1625 Query: 649 atgctgtgggaggcacaccaga 670 |||||||||||||||||||||| Sbjct: 1624 atgctgtgggaggcacaccaga 1603
>gb|AY110220.1| Zea mays CL3641_1 mRNA sequence Length = 880 Score = 428 bits (216), Expect = e-116 Identities = 495/588 (84%), Gaps = 3/588 (0%) Strand = Plus / Plus Query: 41 gaggngacggtctatgatctcagacacggtctccaggaacaggttctcactcgtccccgg 100 |||| ||||||| ||||| ||||| || || || | ||||| ||| ||||| | ||| || Sbjct: 212 gaggtgacggtccatgatttcagatacagtttctaagaacatgttttcactggaccctgg 271 Query: 101 gagaacggcgtcctccgcttcctggatgatgtcctcgatcacagagtctctattcacagt 160 |||||| || ||||| |||||||| ||||||||||| ||| |||| || ||||||||||| Sbjct: 272 gagaacagcatcctctgcttcctgaatgatgtcctcaatctcagactccctattcacagt 331 Query: 161 ttccctgcacagtatacgtcctatgtcatagggtgtgagacctcgcgcagcgcccttctt 220 ||||||||| ||||| || ||||||||||| ||||||| || || || || || ||||| Sbjct: 332 ttccctgcatagtatgcgccctatgtcatatggtgtgaagccacgagctgcacctttctt 391 Query: 221 cangagcatggtgctgatgcgcaggacacgggcgcagctcgaagacagctcccacccgtg 280 || |||||||||||||||||||| ||||| ||||| | | || |||||||||||| || Sbjct: 392 caaaagcatggtgctgatgcgcagaacacgagcgcatcgtggaggcagctcccacccatg 451 Query: 281 gaacctgagaagcttgatgtcctcttccgcgtcgagcgattcaatgtatgcaatggtttc 340 |||| |||||||||||||||| ||||| || ||||| |||| |||||| |||||||||| Sbjct: 452 gaacttgagaagcttgatgtcttcttcagcatcgagtgatttgatgtattcaatggtttc 511 Query: 341 attgctaaaccgctcacgggcttgaggccagtaaagccactcaaaggtacaatcctcaaa 400 || | || ||||||||||||| |||||||| ||||||||||| |||||||| ||||| Sbjct: 512 atcattgaatggctcacgggcttggggccagtagagccactcaaatgtacaatcttcaaa 571 Query: 401 cttctctggcaggcaataaccatgatcaattggaatcagcttgcaggtggcaccatct-- 458 ||||||||||| ||||||||||||||||||||||||||||||| || || |||| ||| Sbjct: 572 cttctctggcaagcaataaccatgatcaattggaatcagcttgtagttgccaccttctct 631 Query: 459 -tccttggacactagaatgttccctgcatgacgatcagcattcgctaacctaatatctaa 517 |||||| |||||||||| ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 632 ctccttgcacactagaatattcccagcatgacgatcagcattagctaacctaatatctag 691 Query: 518 cactgctattttgtggacctccttcaccgggaaagcacgaggacccatgtcctcacaact 577 ||||||||||| || |||||||| || || |||| ||||||||||| || ||| || Sbjct: 692 tactgctattttatgaacctccttgacaggaaaaggtcgaggacccatatcttcagtgct 751 Query: 578 tccatcgttctccataaacatctgcagagatccaaacttgaagctctt 625 ||||| ||| ||||| ||||||||||| || |||| ||||||| |||| Sbjct: 752 tccattgttgtccatgaacatctgcagtgaaccaatcttgaagttctt 799
>gb|BT024182.1| Zea mays clone EL01N0414H08 mRNA sequence Length = 1514 Score = 400 bits (202), Expect = e-108 Identities = 483/575 (84%), Gaps = 4/575 (0%) Strand = Plus / Minus Query: 99 gggagaacggcgtcctccgcttcctggatgatgtcctcgatcacagagtctctattcaca 158 |||||||| || ||||| |||||||| |||||| |||| ||| ||||||| ||||||||| Sbjct: 1234 gggagaacagcatcctctgcttcctgaatgatgacctcaatctcagagtccctattcaca 1175 Query: 159 gtttccctgcacagtatacgtcctatgtcatagggtgtgagacctcgcgcagcgcccttc 218 ||||||||||| ||||| || |||||||||||||| |||| || || | || || ||| Sbjct: 1174 gtttccctgcatagtatgcgccctatgtcatagggcgtgaagccacgagatgcacctttc 1115 Query: 219 ttcangagcatggtgctgatgcgcaggacacgggcgcagctcgaagacagctcccacccg 278 |||| ||||| |||||||||||||||||||| || || | | || |||||||||||| Sbjct: 1114 ttcaaaagcattgtgctgatgcgcaggacacgagcacaccgtggaggcagctcccaccca 1055 Query: 279 tggaacctgagaagcttgatgtcctcttccgcgtcgagcgattcaatgtatgcaatggtt 338 |||| | |||||||||||||||| ||||| || ||||| |||| |||||| |||||||| Sbjct: 1054 tggatcttgagaagcttgatgtcttcttcagcatcgagtgatttgatgtattcaatggtt 995 Query: 339 tcattgctaaaccgctcacgggcttgaggccagtaaagccactcaaaggtacaatcctca 398 |||| | || ||||||||||||| |||||||| ||||||||||| |||||||| ||| Sbjct: 994 tcatcattgaatggctcacgggcttggggccagtagagccactcaaatgtacaatcttca 935 Query: 399 aacttctctggcaggcaataaccatgatcaattggaatcagcttgcaggtggcaccatct 458 | ||||||||||| ||| ||||||||||||||||||||||||||| || || |||| ||| Sbjct: 934 a-cttctctggcaagcagtaaccatgatcaattggaatcagcttgtagttgccaccttct 876 Query: 459 ---tccttggacactagaatgttccctgcatgacgatcagcattcgctaacctaatatct 515 |||||| |||||||||| ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 875 ctctccttgcacactagaatattcccagcatgacgatcagcattagctaacctaatatct 816 Query: 516 aacactgctattttgtggacctccttcaccgggaaagcacgaggacccatgtcctcacaa 575 | ||||||||||| || |||||||| || || |||| ||||||||||| || ||| Sbjct: 815 agtactgctattttatgaacctccttgacaggaaaaggtcgaggacccatatcttcagtg 756 Query: 576 cttccatcgttctccataaacatctgcagagatccaaacttgaagctctttcccctatgt 635 ||||||| ||| ||||| ||||||||||| || |||| ||||||| |||| |||||||| Sbjct: 755 cttccattgttgtccatgaacatctgcagtgaaccaatcttgaagttcttccccctatgc 696 Query: 636 aagcttcggactaatgctgtgggaggcacaccaga 670 || ||||||| |||| ||||||||||||||||| Sbjct: 695 gaggttcggaccaatgtggtgggaggcacaccaga 661
>dbj|AK061872.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A05, full insert sequence Length = 1080 Score = 381 bits (192), Expect = e-102 Identities = 361/417 (86%), Gaps = 3/417 (0%) Strand = Plus / Minus Query: 112 cctccgcttcctggatgatgtcctcgatcacagagtctctattcacagtttccctgcaca 171 |||| |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 884 cctcggcttcctggacgatgtcctcaatctcagagtctctattcacagtttccctgcaca 825 Query: 172 gtatacgtcctatgtcatagggtgtgagacctcgcgcagcgcccttcttcangagcatgg 231 ||||||| || |||||||| |||||||| ||||| || || || ||||| | ||||||| Sbjct: 824 gtatacgcccgatgtcatacggtgtgaggcctcgtgctgcacctttctttaaaagcatgg 765 Query: 232 tgctgatgcgcaggacacgggcgcagctcgaagacagctcccacccgtggaacctgagaa 291 ||||||||| ||||||||| || || || | ||||||||||||||| |||||| |||||| Sbjct: 764 tgctgatgcacaggacacgagcacatcttgcagacagctcccacccatggaacttgagaa 705 Query: 292 gcttgatgtcctcttccgcgtcgagcgattcaatgtatgcaatggtttcattgctaaacc 351 |||||||||||||||| ||||| || |||| ||||||||||||||||||| || || Sbjct: 704 gcttgatgtcctcttcagcgtctagtgatttgatgtatgcaatggtttcatcactgaatg 645 Query: 352 gctcacgggcttgaggccagtaaagccactcaaaggtacaatcctcaaacttctctggca 411 | ||||| || || |||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 644 gttcacgagcctggggccagtacagccactcaaaggtacaatcttcaaacttctctggca 585 Query: 412 ggcaataaccatgatcaattggaatcagcttgcaggtggcaccatct---tccttggaca 468 ||| ||||||||||||||||||| || |||| | || |||| ||| |||||| ||| Sbjct: 584 agcagtaaccatgatcaattggaaccaacttgtaattgccaccttcttcatccttgcaca 525 Query: 469 ctagaatgttccctgcatgacgatcagcattcgctaacctaatatctaacactgcta 525 ||| |||||||||||||||||||||||| || |||||||||| |||||||||||||| Sbjct: 524 ctaaaatgttccctgcatgacgatcagcgtttgctaacctaagatctaacactgcta 468
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 276 bits (139), Expect = 9e-71 Identities = 240/273 (87%), Gaps = 3/273 (1%) Strand = Plus / Plus Query: 401 cttctctggcaggcaataaccatgatcaattggaatcagcttgcaggtggcaccatct-- 458 ||||||||||| ||| ||||||||||||||||||| || |||| | || |||| ||| Sbjct: 13445495 cttctctggcaagcagtaaccatgatcaattggaaccaacttgtaattgccaccttcttc 13445554 Query: 459 -tccttggacactagaatgttccctgcatgacgatcagcattcgctaacctaatatctaa 517 |||||| |||||| |||||||||||||||||||||||| || |||||||||| |||||| Sbjct: 13445555 atccttgcacactaaaatgttccctgcatgacgatcagcgtttgctaacctaagatctaa 13445614 Query: 518 cactgctattttgtggacctccttcaccgggaaagcacgaggacccatgtcctcacaact 577 ||||||||||||||||||||||||||| || || || || |||||||| ||||||||||| Sbjct: 13445615 cactgctattttgtggacctccttcactggaaatgctcggggacccatatcctcacaact 13445674 Query: 578 tccatcgttctccataaacatctgcagagatccaaacttgaagctctttcccctatgtaa 637 ||||| ||||| || ||||||||||| ||||||| |||||||||||| ||||| ||||| Sbjct: 13445675 tccattgttctgaatgaacatctgcagtgatccaatcttgaagctcttccccctgtgtaa 13445734 Query: 638 gcttcggactaatgctgtgggaggcacaccaga 670 ||| ||||| ||||||||||||||||||||||| Sbjct: 13445735 gctccggaccaatgctgtgggaggcacaccaga 13445767 Score = 270 bits (136), Expect = 5e-69 Identities = 252/291 (86%) Strand = Plus / Plus Query: 112 cctccgcttcctggatgatgtcctcgatcacagagtctctattcacagtttccctgcaca 171 |||| |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 13445112 cctcggcttcctggacgatgtcctcaatctcagagtctctattcacagtttccctgcaca 13445171 Query: 172 gtatacgtcctatgtcatagggtgtgagacctcgcgcagcgcccttcttcangagcatgg 231 ||||||| || |||||||| |||||||| ||||| || || || ||||| | ||||||| Sbjct: 13445172 gtatacgcccgatgtcatacggtgtgaggcctcgtgctgcacctttctttaaaagcatgg 13445231 Query: 232 tgctgatgcgcaggacacgggcgcagctcgaagacagctcccacccgtggaacctgagaa 291 ||||||||| ||||||||| || || || | ||||||||||||||| |||||| |||||| Sbjct: 13445232 tgctgatgcacaggacacgagcacatcttgcagacagctcccacccatggaacttgagaa 13445291 Query: 292 gcttgatgtcctcttccgcgtcgagcgattcaatgtatgcaatggtttcattgctaaacc 351 |||||||||||||||| ||||| || |||| ||||||||||||||||||| || || Sbjct: 13445292 gcttgatgtcctcttcagcgtctagtgatttgatgtatgcaatggtttcatcactgaatg 13445351 Query: 352 gctcacgggcttgaggccagtaaagccactcaaaggtacaatcctcaaact 402 | ||||| || || |||||||| |||||||||||||||||||| ||||||| Sbjct: 13445352 gttcacgagcctggggccagtacagccactcaaaggtacaatcttcaaact 13445402
>dbj|AP003952.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1294_G12 Length = 121979 Score = 276 bits (139), Expect = 9e-71 Identities = 240/273 (87%), Gaps = 3/273 (1%) Strand = Plus / Plus Query: 401 cttctctggcaggcaataaccatgatcaattggaatcagcttgcaggtggcaccatct-- 458 ||||||||||| ||| ||||||||||||||||||| || |||| | || |||| ||| Sbjct: 106927 cttctctggcaagcagtaaccatgatcaattggaaccaacttgtaattgccaccttcttc 106986 Query: 459 -tccttggacactagaatgttccctgcatgacgatcagcattcgctaacctaatatctaa 517 |||||| |||||| |||||||||||||||||||||||| || |||||||||| |||||| Sbjct: 106987 atccttgcacactaaaatgttccctgcatgacgatcagcgtttgctaacctaagatctaa 107046 Query: 518 cactgctattttgtggacctccttcaccgggaaagcacgaggacccatgtcctcacaact 577 ||||||||||||||||||||||||||| || || || || |||||||| ||||||||||| Sbjct: 107047 cactgctattttgtggacctccttcactggaaatgctcggggacccatatcctcacaact 107106 Query: 578 tccatcgttctccataaacatctgcagagatccaaacttgaagctctttcccctatgtaa 637 ||||| ||||| || ||||||||||| ||||||| |||||||||||| ||||| ||||| Sbjct: 107107 tccattgttctgaatgaacatctgcagtgatccaatcttgaagctcttccccctgtgtaa 107166 Query: 638 gcttcggactaatgctgtgggaggcacaccaga 670 ||| ||||| ||||||||||||||||||||||| Sbjct: 107167 gctccggaccaatgctgtgggaggcacaccaga 107199 Score = 270 bits (136), Expect = 5e-69 Identities = 252/291 (86%) Strand = Plus / Plus Query: 112 cctccgcttcctggatgatgtcctcgatcacagagtctctattcacagtttccctgcaca 171 |||| |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 106544 cctcggcttcctggacgatgtcctcaatctcagagtctctattcacagtttccctgcaca 106603 Query: 172 gtatacgtcctatgtcatagggtgtgagacctcgcgcagcgcccttcttcangagcatgg 231 ||||||| || |||||||| |||||||| ||||| || || || ||||| | ||||||| Sbjct: 106604 gtatacgcccgatgtcatacggtgtgaggcctcgtgctgcacctttctttaaaagcatgg 106663 Query: 232 tgctgatgcgcaggacacgggcgcagctcgaagacagctcccacccgtggaacctgagaa 291 ||||||||| ||||||||| || || || | ||||||||||||||| |||||| |||||| Sbjct: 106664 tgctgatgcacaggacacgagcacatcttgcagacagctcccacccatggaacttgagaa 106723 Query: 292 gcttgatgtcctcttccgcgtcgagcgattcaatgtatgcaatggtttcattgctaaacc 351 |||||||||||||||| ||||| || |||| ||||||||||||||||||| || || Sbjct: 106724 gcttgatgtcctcttcagcgtctagtgatttgatgtatgcaatggtttcatcactgaatg 106783 Query: 352 gctcacgggcttgaggccagtaaagccactcaaaggtacaatcctcaaact 402 | ||||| || || |||||||| |||||||||||||||||||| ||||||| Sbjct: 106784 gttcacgagcctggggccagtacagccactcaaaggtacaatcttcaaact 106834
>dbj|AP003506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0428A03 Length = 136799 Score = 276 bits (139), Expect = 9e-71 Identities = 240/273 (87%), Gaps = 3/273 (1%) Strand = Plus / Plus Query: 401 cttctctggcaggcaataaccatgatcaattggaatcagcttgcaggtggcaccatct-- 458 ||||||||||| ||| ||||||||||||||||||| || |||| | || |||| ||| Sbjct: 56919 cttctctggcaagcagtaaccatgatcaattggaaccaacttgtaattgccaccttcttc 56978 Query: 459 -tccttggacactagaatgttccctgcatgacgatcagcattcgctaacctaatatctaa 517 |||||| |||||| |||||||||||||||||||||||| || |||||||||| |||||| Sbjct: 56979 atccttgcacactaaaatgttccctgcatgacgatcagcgtttgctaacctaagatctaa 57038 Query: 518 cactgctattttgtggacctccttcaccgggaaagcacgaggacccatgtcctcacaact 577 ||||||||||||||||||||||||||| || || || || |||||||| ||||||||||| Sbjct: 57039 cactgctattttgtggacctccttcactggaaatgctcggggacccatatcctcacaact 57098 Query: 578 tccatcgttctccataaacatctgcagagatccaaacttgaagctctttcccctatgtaa 637 ||||| ||||| || ||||||||||| ||||||| |||||||||||| ||||| ||||| Sbjct: 57099 tccattgttctgaatgaacatctgcagtgatccaatcttgaagctcttccccctgtgtaa 57158 Query: 638 gcttcggactaatgctgtgggaggcacaccaga 670 ||| ||||| ||||||||||||||||||||||| Sbjct: 57159 gctccggaccaatgctgtgggaggcacaccaga 57191 Score = 270 bits (136), Expect = 5e-69 Identities = 252/291 (86%) Strand = Plus / Plus Query: 112 cctccgcttcctggatgatgtcctcgatcacagagtctctattcacagtttccctgcaca 171 |||| |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 56536 cctcggcttcctggacgatgtcctcaatctcagagtctctattcacagtttccctgcaca 56595 Query: 172 gtatacgtcctatgtcatagggtgtgagacctcgcgcagcgcccttcttcangagcatgg 231 ||||||| || |||||||| |||||||| ||||| || || || ||||| | ||||||| Sbjct: 56596 gtatacgcccgatgtcatacggtgtgaggcctcgtgctgcacctttctttaaaagcatgg 56655 Query: 232 tgctgatgcgcaggacacgggcgcagctcgaagacagctcccacccgtggaacctgagaa 291 ||||||||| ||||||||| || || || | ||||||||||||||| |||||| |||||| Sbjct: 56656 tgctgatgcacaggacacgagcacatcttgcagacagctcccacccatggaacttgagaa 56715 Query: 292 gcttgatgtcctcttccgcgtcgagcgattcaatgtatgcaatggtttcattgctaaacc 351 |||||||||||||||| ||||| || |||| ||||||||||||||||||| || || Sbjct: 56716 gcttgatgtcctcttcagcgtctagtgatttgatgtatgcaatggtttcatcactgaatg 56775 Query: 352 gctcacgggcttgaggccagtaaagccactcaaaggtacaatcctcaaact 402 | ||||| || || |||||||| |||||||||||||||||||| ||||||| Sbjct: 56776 gttcacgagcctggggccagtacagccactcaaaggtacaatcttcaaact 56826
>ref|XM_465025.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2621 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Minus Query: 357 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaacttctctggcaggcaa 416 |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 1946 cgggcttggggccagtagagccactcaaaggtacaatcttcaaacttctctggcaggcag 1887 Query: 417 taaccatgatcaattggaatca 438 || ||||||||||||||||||| Sbjct: 1886 tacccatgatcaattggaatca 1865 Score = 69.9 bits (35), Expect = 1e-08 Identities = 113/139 (81%) Strand = Plus / Minus Query: 474 atgttccctgcatgacgatcagcattcgctaacctaatatctaacactgctattttgtgg 533 |||||||| ||||||||||||||||| || ||||||||||| | | || || || || Sbjct: 1829 atgttcccagcatgacgatcagcatttgccaacctaatatccagtatggcaatcttctga 1770 Query: 534 acctccttcaccgggaaagcacgaggacccatgtcctcacaacttccatcgttctccata 593 ||||| || || |||||||| ||||| ||||| ||||||||||| |||| ||| || | | Sbjct: 1769 acctctttaactgggaaagctcgagggcccatatcctcacaactgccattgttatctaca 1710 Query: 594 aacatctgcagagatccaa 612 |||| ||||| ||||||| Sbjct: 1709 aacagctgcaatgatccaa 1691 Score = 52.0 bits (26), Expect = 0.002 Identities = 67/81 (82%) Strand = Plus / Minus Query: 213 cccttcttcangagcatggtgctgatgcgcaggacacgggcgcagctcgaagacagctcc 272 |||||||||| ||||| |||||||||||||| || ||||| || | ||| ||| || Sbjct: 2090 cccttcttcaaaagcattgtgctgatgcgcagaactcgggcacactggggagatagcgcc 2031 Query: 273 cacccgtggaacctgagaagc 293 |||||||||||| |||||||| Sbjct: 2030 cacccgtggaacttgagaagc 2010
>dbj|AK065628.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027K22, full insert sequence Length = 2621 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Minus Query: 357 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaacttctctggcaggcaa 416 |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 1946 cgggcttggggccagtagagccactcaaaggtacaatcttcaaacttctctggcaggcag 1887 Query: 417 taaccatgatcaattggaatca 438 || ||||||||||||||||||| Sbjct: 1886 tacccatgatcaattggaatca 1865 Score = 69.9 bits (35), Expect = 1e-08 Identities = 113/139 (81%) Strand = Plus / Minus Query: 474 atgttccctgcatgacgatcagcattcgctaacctaatatctaacactgctattttgtgg 533 |||||||| ||||||||||||||||| || ||||||||||| | | || || || || Sbjct: 1829 atgttcccagcatgacgatcagcatttgccaacctaatatccagtatggcaatcttctga 1770 Query: 534 acctccttcaccgggaaagcacgaggacccatgtcctcacaacttccatcgttctccata 593 ||||| || || |||||||| ||||| ||||| ||||||||||| |||| ||| || | | Sbjct: 1769 acctctttaactgggaaagctcgagggcccatatcctcacaactgccattgttatctaca 1710 Query: 594 aacatctgcagagatccaa 612 |||| ||||| ||||||| Sbjct: 1709 aacagctgcaatgatccaa 1691 Score = 52.0 bits (26), Expect = 0.002 Identities = 67/81 (82%) Strand = Plus / Minus Query: 213 cccttcttcangagcatggtgctgatgcgcaggacacgggcgcagctcgaagacagctcc 272 |||||||||| ||||| |||||||||||||| || ||||| || | ||| ||| || Sbjct: 2090 cccttcttcaaaagcattgtgctgatgcgcagaactcgggcacactggggagatagcgcc 2031 Query: 273 cacccgtggaacctgagaagc 293 |||||||||||| |||||||| Sbjct: 2030 cacccgtggaacttgagaagc 2010
>dbj|AK061705.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-E06, full insert sequence Length = 1204 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Minus Query: 357 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaacttctctggcaggcaa 416 |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 529 cgggcttggggccagtagagccactcaaaggtacaatcttcaaacttctctggcaggcag 470 Query: 417 taaccatgatcaattggaatca 438 || ||||||||||||||||||| Sbjct: 469 tacccatgatcaattggaatca 448 Score = 69.9 bits (35), Expect = 1e-08 Identities = 113/139 (81%) Strand = Plus / Minus Query: 474 atgttccctgcatgacgatcagcattcgctaacctaatatctaacactgctattttgtgg 533 |||||||| ||||||||||||||||| || ||||||||||| | | || || || || Sbjct: 412 atgttcccagcatgacgatcagcatttgccaacctaatatccagtatggcaatcttctga 353 Query: 534 acctccttcaccgggaaagcacgaggacccatgtcctcacaacttccatcgttctccata 593 ||||| || || |||||||| ||||| ||||| ||||||||||| |||| ||| || | | Sbjct: 352 acctctttaactgggaaagctcgagggcccatatcctcacaactgccattgttatctaca 293 Query: 594 aacatctgcagagatccaa 612 |||| ||||| ||||||| Sbjct: 292 aacagctgcaatgatccaa 274 Score = 52.0 bits (26), Expect = 0.002 Identities = 67/81 (82%) Strand = Plus / Minus Query: 213 cccttcttcangagcatggtgctgatgcgcaggacacgggcgcagctcgaagacagctcc 272 |||||||||| ||||| |||||||||||||| || ||||| || | ||| ||| || Sbjct: 673 cccttcttcaaaagcattgtgctgatgcgcagaactcgggcacactggggagatagcgcc 614 Query: 273 cacccgtggaacctgagaagc 293 |||||||||||| |||||||| Sbjct: 613 cacccgtggaacttgagaagc 593
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 69.9 bits (35), Expect = 1e-08 Identities = 113/139 (81%) Strand = Plus / Plus Query: 474 atgttccctgcatgacgatcagcattcgctaacctaatatctaacactgctattttgtgg 533 |||||||| ||||||||||||||||| || ||||||||||| | | || || || || Sbjct: 10994507 atgttcccagcatgacgatcagcatttgccaacctaatatccagtatggcaatcttctga 10994566 Query: 534 acctccttcaccgggaaagcacgaggacccatgtcctcacaacttccatcgttctccata 593 ||||| || || |||||||| ||||| ||||| ||||||||||| |||| ||| || | | Sbjct: 10994567 acctctttaactgggaaagctcgagggcccatatcctcacaactgccattgttatctaca 10994626 Query: 594 aacatctgcagagatccaa 612 |||| ||||| ||||||| Sbjct: 10994627 aacagctgcaatgatccaa 10994645 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 357 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaact 402 |||||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 10994024 cgggcttggggccagtagagccactcaaaggtacaatcttcaaact 10994069 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 401 cttctctggcaggcaataaccatgatcaattggaatca 438 ||||||||||||||| || ||||||||||||||||||| Sbjct: 10994434 cttctctggcaggcagtacccatgatcaattggaatca 10994471 Score = 52.0 bits (26), Expect = 0.002 Identities = 67/81 (82%) Strand = Plus / Plus Query: 213 cccttcttcangagcatggtgctgatgcgcaggacacgggcgcagctcgaagacagctcc 272 |||||||||| ||||| |||||||||||||| || ||||| || | ||| ||| || Sbjct: 10993880 cccttcttcaaaagcattgtgctgatgcgcagaactcgggcacactggggagatagcgcc 10993939 Query: 273 cacccgtggaacctgagaagc 293 |||||||||||| |||||||| Sbjct: 10993940 cacccgtggaacttgagaagc 10993960
>dbj|AP004212.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1086_G08 Length = 59883 Score = 69.9 bits (35), Expect = 1e-08 Identities = 113/139 (81%) Strand = Plus / Plus Query: 474 atgttccctgcatgacgatcagcattcgctaacctaatatctaacactgctattttgtgg 533 |||||||| ||||||||||||||||| || ||||||||||| | | || || || || Sbjct: 21170 atgttcccagcatgacgatcagcatttgccaacctaatatccagtatggcaatcttctga 21229 Query: 534 acctccttcaccgggaaagcacgaggacccatgtcctcacaacttccatcgttctccata 593 ||||| || || |||||||| ||||| ||||| ||||||||||| |||| ||| || | | Sbjct: 21230 acctctttaactgggaaagctcgagggcccatatcctcacaactgccattgttatctaca 21289 Query: 594 aacatctgcagagatccaa 612 |||| ||||| ||||||| Sbjct: 21290 aacagctgcaatgatccaa 21308 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 357 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaact 402 |||||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 20687 cgggcttggggccagtagagccactcaaaggtacaatcttcaaact 20732 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 401 cttctctggcaggcaataaccatgatcaattggaatca 438 ||||||||||||||| || ||||||||||||||||||| Sbjct: 21097 cttctctggcaggcagtacccatgatcaattggaatca 21134 Score = 52.0 bits (26), Expect = 0.002 Identities = 67/81 (82%) Strand = Plus / Plus Query: 213 cccttcttcangagcatggtgctgatgcgcaggacacgggcgcagctcgaagacagctcc 272 |||||||||| ||||| |||||||||||||| || ||||| || | ||| ||| || Sbjct: 20543 cccttcttcaaaagcattgtgctgatgcgcagaactcgggcacactggggagatagcgcc 20602 Query: 273 cacccgtggaacctgagaagc 293 |||||||||||| |||||||| Sbjct: 20603 cacccgtggaacttgagaagc 20623
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 69.9 bits (35), Expect = 1e-08 Identities = 113/139 (81%) Strand = Plus / Plus Query: 474 atgttccctgcatgacgatcagcattcgctaacctaatatctaacactgctattttgtgg 533 |||||||| ||||||||||||||||| || ||||||||||| | | || || || || Sbjct: 200706 atgttcccagcatgacgatcagcatttgccaacctaatatccagtatggcaatcttctga 200765 Query: 534 acctccttcaccgggaaagcacgaggacccatgtcctcacaacttccatcgttctccata 593 ||||| || || |||||||| ||||| ||||| ||||||||||| |||| ||| || | | Sbjct: 200766 acctctttaactgggaaagctcgagggcccatatcctcacaactgccattgttatctaca 200825 Query: 594 aacatctgcagagatccaa 612 |||| ||||| ||||||| Sbjct: 200826 aacagctgcaatgatccaa 200844 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 357 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaact 402 |||||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 200223 cgggcttggggccagtagagccactcaaaggtacaatcttcaaact 200268 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 401 cttctctggcaggcaataaccatgatcaattggaatca 438 ||||||||||||||| || ||||||||||||||||||| Sbjct: 200633 cttctctggcaggcagtacccatgatcaattggaatca 200670 Score = 52.0 bits (26), Expect = 0.002 Identities = 67/81 (82%) Strand = Plus / Plus Query: 213 cccttcttcangagcatggtgctgatgcgcaggacacgggcgcagctcgaagacagctcc 272 |||||||||| ||||| |||||||||||||| || ||||| || | ||| ||| || Sbjct: 200079 cccttcttcaaaagcattgtgctgatgcgcagaactcgggcacactggggagatagcgcc 200138 Query: 273 cacccgtggaacctgagaagc 293 |||||||||||| |||||||| Sbjct: 200139 cacccgtggaacttgagaagc 200159
>ref|NM_105121.2| Arabidopsis thaliana inositol or phosphatidylinositol kinase/ phosphotransferase, alcohol group as acceptor AT1G64460 mRNA, complete cds Length = 1095 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 360 gcttgaggccagtaaagccactcaaaggtacaatcctcaaacttctctggcaggcaataa 419 ||||| |||||||| ||||||||||| || ||||| ||||| ||||| |||| |||||| Sbjct: 569 gcttgcggccagtagagccactcaaatgtgcaatcttcaaaattctcgggcaaacaataa 510 Query: 420 ccatgatcaattggaat 436 |||||||| || ||||| Sbjct: 509 ccatgatcgatgggaat 493
>gb|BT010909.1| Arabidopsis thaliana At1g64460 mRNA, complete cds Length = 906 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 360 gcttgaggccagtaaagccactcaaaggtacaatcctcaaacttctctggcaggcaataa 419 ||||| |||||||| ||||||||||| || ||||| ||||| ||||| |||| |||||| Sbjct: 569 gcttgcggccagtagagccactcaaatgtgcaatcttcaaaattctcgggcaaacaataa 510 Query: 420 ccatgatcaattggaat 436 |||||||| || ||||| Sbjct: 509 ccatgatcgatgggaat 493
>gb|AC137828.24| Medicago truncatula clone mth2-6c16, complete sequence Length = 128575 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 408 ggcaggcaataaccatgatcaattggaatcag 439 |||||||||||||||||||||||||||||||| Sbjct: 88478 ggcaggcaataaccatgatcaattggaatcag 88447
>gb|AC138056.33| Medicago truncatula clone mth2-13i6, complete sequence Length = 157258 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 408 ggcaggcaataaccatgatcaattggaatcag 439 |||||||||||||||||||||||||||||||| Sbjct: 44926 ggcaggcaataaccatgatcaattggaatcag 44895
>ref|NM_188652.1| Oryza sativa (japonica cultivar-group), Ozsa8255 predicted mRNA Length = 1767 Score = 60.0 bits (30), Expect = 1e-05 Identities = 69/82 (84%) Strand = Plus / Minus Query: 360 gcttgaggccagtaaagccactcaaaggtacaatcctcaaacttctctggcaggcaataa 419 ||||| |||||||||||||| ||||| || || || ||||| | || ||||| ||||| Sbjct: 1430 gcttggggccagtaaagccaatcaaatgtgcagtcttcaaagctttcaggcagacaatac 1371 Query: 420 ccatgatcaattggaatcagct 441 |||||||||||||| ||||||| Sbjct: 1370 ccatgatcaattggtatcagct 1349
>dbj|AP004895.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT02D01, TM0039, complete sequence Length = 91268 Score = 56.0 bits (28), Expect = 2e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 459 tccttggacactagaatgttccctgcatgacgatcagcattcgctaacctaatatctaac 518 ||||||| |||| ||||||||| ||||| | ||| ||||| || ||||| ||||| | | Sbjct: 45752 tccttggcaactaaaatgttcccagcatgcctatctgcatttgccaacctgatatccagc 45811 Query: 519 actgctattttgtggacctccttcaccgggaaagcacgaggacccatgtcctcacaactt 578 || | || ||||| ||||| | |||||| || ||| ||| |||||||| ||||||||| Sbjct: 45812 acagagatcttgtgtacctcttccaccggaaatacactagggcccatgtcttcacaactt 45871 Query: 579 ccatcgttctccataaacatctgcagagatcc 610 ||| |||| |||||||||||| || ||||| Sbjct: 45872 ccaatattcttcataaacatctgaagtgatcc 45903 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 413 gcaataaccatgatcaattggaat 436 |||||| ||||||||||||||||| Sbjct: 45703 gcaatagccatgatcaattggaat 45726
>gb|AC142526.5| Medicago truncatula clone mth2-34h20, complete sequence Length = 113622 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 360 gcttgaggccagtaaagccactcaaaggtacaatcctcaaact 402 |||||||||||||||||||| ||||| || ||||| ||||||| Sbjct: 18976 gcttgaggccagtaaagccaatcaaatgtgcaatcttcaaact 18934
>ref|NM_201971.1| Arabidopsis thaliana inositol or phosphatidylinositol kinase/ phosphotransferase, alcohol group as acceptor AT2G46500 transcript variant AT2G46500.2 mRNA, complete cds Length = 2138 Score = 48.1 bits (24), Expect = 0.038 Identities = 51/60 (85%) Strand = Plus / Minus Query: 558 ggacccatgtcctcacaacttccatcgttctccataaacatctgcagagatccaaacttg 617 |||||||| || ||||| || ||||||||||| |||||||||| || ||||||| |||| Sbjct: 1420 ggacccatatcttcacagctgccatcgttctcagtaaacatctgaagtgatccaatcttg 1361 Score = 40.1 bits (20), Expect = 9.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 357 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaa 400 |||||||| ||||| || ||||||||||| || ||||| ||||| Sbjct: 1621 cgggcttgtggccaatatagccactcaaacgtgcaatcttcaaa 1578
>ref|NM_130214.2| Arabidopsis thaliana inositol or phosphatidylinositol kinase/ phosphotransferase, alcohol group as acceptor AT2G46500 transcript variant AT2G46500.1 mRNA, complete cds Length = 2311 Score = 48.1 bits (24), Expect = 0.038 Identities = 51/60 (85%) Strand = Plus / Minus Query: 558 ggacccatgtcctcacaacttccatcgttctccataaacatctgcagagatccaaacttg 617 |||||||| || ||||| || ||||||||||| |||||||||| || ||||||| |||| Sbjct: 1593 ggacccatatcttcacagctgccatcgttctcagtaaacatctgaagtgatccaatcttg 1534 Score = 40.1 bits (20), Expect = 9.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 357 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaa 400 |||||||| ||||| || ||||||||||| || ||||| ||||| Sbjct: 1794 cgggcttgtggccaatatagccactcaaacgtgcaatcttcaaa 1751
>gb|AC006526.8| Arabidopsis thaliana chromosome 2 clone F11C10 map CIC02E07, complete sequence Length = 95214 Score = 48.1 bits (24), Expect = 0.038 Identities = 51/60 (85%) Strand = Plus / Plus Query: 558 ggacccatgtcctcacaacttccatcgttctccataaacatctgcagagatccaaacttg 617 |||||||| || ||||| || ||||||||||| |||||||||| || ||||||| |||| Sbjct: 71077 ggacccatatcttcacagctgccatcgttctcagtaaacatctgaagtgatccaatcttg 71136 Score = 44.1 bits (22), Expect = 0.59 Identities = 40/46 (86%) Strand = Plus / Plus Query: 357 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaact 402 |||||||| ||||| || ||||||||||| || ||||| ||||||| Sbjct: 70783 cgggcttgtggccaatatagccactcaaacgtgcaatcttcaaact 70828
>gb|AC006418.4| Arabidopsis thaliana chromosome 2 clone F13A10 map CIC06C03, complete sequence Length = 84825 Score = 48.1 bits (24), Expect = 0.038 Identities = 51/60 (85%) Strand = Plus / Plus Query: 558 ggacccatgtcctcacaacttccatcgttctccataaacatctgcagagatccaaacttg 617 |||||||| || ||||| || ||||||||||| |||||||||| || ||||||| |||| Sbjct: 12015 ggacccatatcttcacagctgccatcgttctcagtaaacatctgaagtgatccaatcttg 12074 Score = 44.1 bits (22), Expect = 0.59 Identities = 40/46 (86%) Strand = Plus / Plus Query: 357 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaact 402 |||||||| ||||| || ||||||||||| || ||||| ||||||| Sbjct: 11721 cgggcttgtggccaatatagccactcaaacgtgcaatcttcaaact 11766
>gb|AF419566.1|AF419566 Arabidopsis thaliana At2g46500/F11C10.19 mRNA, complete cds Length = 2304 Score = 48.1 bits (24), Expect = 0.038 Identities = 51/60 (85%) Strand = Plus / Minus Query: 558 ggacccatgtcctcacaacttccatcgttctccataaacatctgcagagatccaaacttg 617 |||||||| || ||||| || ||||||||||| |||||||||| || ||||||| |||| Sbjct: 1589 ggacccatatcttcacagctgccatcgttctcagtaaacatctgaagtgatccaatcttg 1530 Score = 40.1 bits (20), Expect = 9.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 357 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaa 400 |||||||| ||||| || ||||||||||| || ||||| ||||| Sbjct: 1790 cgggcttgtggccaatatagccactcaaacgtgcaatcttcaaa 1747
>emb|BX819749.1|CNS0AA14 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS22ZB08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2087 Score = 48.1 bits (24), Expect = 0.038 Identities = 51/60 (85%) Strand = Plus / Minus Query: 558 ggacccatgtcctcacaacttccatcgttctccataaacatctgcagagatccaaacttg 617 |||||||| || ||||| || ||||||||||| |||||||||| || ||||||| |||| Sbjct: 1394 ggacccatatcttcacagctgccatcgttctcagtaaacatctgaagtgatccaatcttg 1335 Score = 40.1 bits (20), Expect = 9.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 357 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaa 400 |||||||| ||||| || ||||||||||| || ||||| ||||| Sbjct: 1595 cgggcttgtggccaatatagccactcaaacgtgcaatcttcaaa 1552
>gb|BT002694.1| Arabidopsis thaliana At2g46500/F11C10.19 gene, complete cds Length = 1701 Score = 48.1 bits (24), Expect = 0.038 Identities = 51/60 (85%) Strand = Plus / Minus Query: 558 ggacccatgtcctcacaacttccatcgttctccataaacatctgcagagatccaaacttg 617 |||||||| || ||||| || ||||||||||| |||||||||| || ||||||| |||| Sbjct: 1163 ggacccatatcttcacagctgccatcgttctcagtaaacatctgaagtgatccaatcttg 1104 Score = 40.1 bits (20), Expect = 9.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 357 cgggcttgaggccagtaaagccactcaaaggtacaatcctcaaa 400 |||||||| ||||| || ||||||||||| || ||||| ||||| Sbjct: 1364 cgggcttgtggccaatatagccactcaaacgtgcaatcttcaaa 1321
>gb|AC009519.4|AC009519 Genomic sequence for Arabidopsis thaliana BAC F1N19 from chromosome I, complete sequence Length = 113172 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Plus Query: 360 gcttgaggccagtaaagccactcaaaggtacaatcctcaaact 402 ||||| |||||||| ||||||||||| || ||||| ||||||| Sbjct: 12313 gcttgcggccagtagagccactcaaatgtgcaatcttcaaact 12355
>ref|XM_476005.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1839 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 542 caccgggaaagcacgaggacccatgtcctc 571 ||||||||| |||||||| ||||||||||| Sbjct: 1218 caccgggaacgcacgaggtcccatgtcctc 1189
>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022J22, complete sequence Length = 142854 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 542 caccgggaaagcacgaggacccatgtcctc 571 ||||||||| |||||||| ||||||||||| Sbjct: 46751 caccgggaacgcacgaggtcccatgtcctc 46722 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 366 ggccagtaaagccactcaaaggtacaatcctcaaact 402 |||||||| |||||||| || || ||||||||||||| Sbjct: 47013 ggccagtagagccactcgaatgtgcaatcctcaaact 46977
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence Length = 100800 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 542 caccgggaaagcacgaggacccatgtcctc 571 ||||||||| |||||||| ||||||||||| Sbjct: 89516 caccgggaacgcacgaggtcccatgtcctc 89487 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 366 ggccagtaaagccactcaaaggtacaatcctcaaact 402 |||||||| |||||||| || || ||||||||||||| Sbjct: 89778 ggccagtagagccactcgaatgtgcaatcctcaaact 89742
>gb|AC067746.7| Homo sapiens chromosome 10 clone RP11-408L20, complete sequence Length = 189545 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 535 cctccttcaccgggaaagcacg 556 |||||||||||||||||||||| Sbjct: 87911 cctccttcaccgggaaagcacg 87932
>gb|AC154038.1| Mus musculus 6 BAC RP23-49L8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 213878 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 617 gaagctctttcccctatgtaag 638 |||||||||||||||||||||| Sbjct: 169161 gaagctctttcccctatgtaag 169182
>gb|AC153860.4| Mus musculus 6 BAC RP23-170C11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 213719 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 617 gaagctctttcccctatgtaag 638 |||||||||||||||||||||| Sbjct: 183588 gaagctctttcccctatgtaag 183567
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 542 caccgggaaagcacgaggacccatgtcctc 571 ||||||||| |||||||| ||||||||||| Sbjct: 29163292 caccgggaacgcacgaggtcccatgtcctc 29163263 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 366 ggccagtaaagccactcaaaggtacaatcctcaaact 402 |||||||| |||||||| || || ||||||||||||| Sbjct: 29163554 ggccagtagagccactcgaatgtgcaatcctcaaact 29163518
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Plus Query: 408 ggcaggcaataaccatgatcaattggaatcagct 441 ||||| ||||| |||||||||||||| ||||||| Sbjct: 7443804 ggcagacaatacccatgatcaattggtatcagct 7443837
>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0702F03 Length = 141111 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Plus Query: 408 ggcaggcaataaccatgatcaattggaatcagct 441 ||||| ||||| |||||||||||||| ||||||| Sbjct: 104832 ggcagacaatacccatgatcaattggtatcagct 104865
>dbj|AK072823.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139A09, full insert sequence Length = 2303 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 542 caccgggaaagcacgaggacccatgtcctc 571 ||||||||| |||||||| ||||||||||| Sbjct: 1531 caccgggaacgcacgaggtcccatgtcctc 1502
>gb|AC005364.1| Homo sapiens chromosome 16, cosmid clone 53H2 (LANL), complete sequence Length = 36342 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 375 agccactcaaaggtacaatcctcaa 399 |||||||||||||||||||| |||| Sbjct: 529 agccactcaaaggtacaatcgtcaa 553
>gb|AC005347.1| Homo sapiens chromosome 16, cosmid clone 308C6 (LANL), complete sequence Length = 35828 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 375 agccactcaaaggtacaatcctcaa 399 |||||||||||||||||||| |||| Sbjct: 21317 agccactcaaaggtacaatcgtcaa 21341
>emb|AL136382.6| Human DNA sequence from clone RP5-977L11 on chromosome 1p22.3-31.2 Contains the 3' end of a novel gene (KIAA1229), complete sequence Length = 136387 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 tttctaaacagatattacttg 35 ||||||||||||||||||||| Sbjct: 96476 tttctaaacagatattacttg 96496
>gb|AC092139.5| Homo sapiens chromosome 16 clone RP11-391L3, complete sequence Length = 191731 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 cctatgtcatagggtgtgaga 200 ||||||||||||||||||||| Sbjct: 99904 cctatgtcatagggtgtgaga 99884
>ref|NM_122330.1| Arabidopsis thaliana inositol or phosphatidylinositol kinase/ phosphotransferase, alcohol group as acceptor AT5G24240 mRNA, complete cds Length = 1725 Score = 40.1 bits (20), Expect = 9.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 360 gcttgaggccagtaaagccactcaaaggtacaatcctcaaactt 403 |||||||||||||| ||||| || || || ||||| |||||||| Sbjct: 1385 gcttgaggccagtatagccattcgaatgtgcaatcttcaaactt 1342
>gb|AC119905.11| Mus musculus chromosome 17, clone RP24-238N14, complete sequence Length = 179042 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 323 aatgtatgcaatggtttcattgct 346 ||||||||||||||| |||||||| Sbjct: 77639 aatgtatgcaatggtgtcattgct 77662
>gb|AC148094.1| Mus musculus chromosome UNK clone RP24-497G1, complete sequence Length = 164650 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gttattctgagatgtttcta 20 |||||||||||||||||||| Sbjct: 70806 gttattctgagatgtttcta 70787
>ref|XM_505346.1| Yarrowia lipolytica CLIB122, YALI0F12837g predicted mRNA Length = 3690 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 651 gctgtgggaggcacaccaga 670 |||||||||||||||||||| Sbjct: 3146 gctgtgggaggcacaccaga 3127
>emb|AL158835.11| Human DNA sequence from clone RP11-383C5 on chromosome 10 Contains a aldolase A, fructose-bisphosphate pseudogene 2, four novel genes, the gene for erythroid differentiation-related factor 1 (EDRF1), the 3' end of the MMP21 gene for matrix metalloproteinase 21 and one CpG island, complete sequence Length = 174530 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 614 cttgaagctctttcccctat 633 |||||||||||||||||||| Sbjct: 64744 cttgaagctctttcccctat 64725
>emb|AL513409.1|NCB11O9 Neurospora crassa DNA linkage group II BAC clone B11O9 Length = 71085 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 cctggatgatgtcctcgatcacag 144 ||||||||||||||||| |||||| Sbjct: 31621 cctggatgatgtcctcgttcacag 31598
>emb|CR626903.5| Zebrafish DNA sequence from clone CH211-262A22 in linkage group 16, complete sequence Length = 143457 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 aatgtatgcaatggtttcat 342 |||||||||||||||||||| Sbjct: 36064 aatgtatgcaatggtttcat 36083
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 cagctcccacccgtggaacctgag 289 |||||||||||||| ||||||||| Sbjct: 143751 cagctcccacccgttgaacctgag 143728
>gb|AC013737.5| Homo sapiens chromosome 10 clone RP11-313B15, complete sequence Length = 203259 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 acagagtctctattcacagt 160 |||||||||||||||||||| Sbjct: 91688 acagagtctctattcacagt 91707
>gb|AC092357.2| Homo sapiens chromosome 16 clone RP11-332P24, complete sequence Length = 191768 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 651 gctgtgggaggcacaccaga 670 |||||||||||||||||||| Sbjct: 1775 gctgtgggaggcacaccaga 1756
>gb|AC157531.2| Pan troglodytes BAC clone CH251-277G13 from chromosome unknown, complete sequence Length = 183251 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 acagagtctctattcacagt 160 |||||||||||||||||||| Sbjct: 53727 acagagtctctattcacagt 53708
>gb|AC099699.16| Mus musculus chromosome 7, clone RP23-32A8, complete sequence Length = 195263 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 cattcgctaacctaatatct 515 |||||||||||||||||||| Sbjct: 153305 cattcgctaacctaatatct 153286
>dbj|AB125314.1| Nannochloris bacillaris NbrbcS2, Akl, NbSep, PABP1 genes for ribulose-1,5-bisphosphate carboxyase/oxygenase small subunit, arabinose kinase-like protein, CDC10 cell division cycle 10 homolog, poly(A) binding protein I, partial and complete cds Length = 11337 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctctattcacagtttccct 166 |||||||||||||||||||| Sbjct: 5493 tctctattcacagtttccct 5512
>gb|AC018558.6| Homo sapiens chromosome 16 clone RP11-80F22, complete sequence Length = 151051 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 651 gctgtgggaggcacaccaga 670 |||||||||||||||||||| Sbjct: 52038 gctgtgggaggcacaccaga 52019
>gb|AC141633.4| Mus musculus BAC clone RP24-155I4 from chromosome 18, complete sequence Length = 163886 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gttattctgagatgtttcta 20 |||||||||||||||||||| Sbjct: 79495 gttattctgagatgtttcta 79514
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 tggatgatgtcctcgatcac 142 |||||||||||||||||||| Sbjct: 8525526 tggatgatgtcctcgatcac 8525545
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5) Length = 2199546 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ttcaatgtatgcaatggttt 339 |||||||||||||||||||| Sbjct: 1454859 ttcaatgtatgcaatggttt 1454878
>gb|AC007795.1|AC007795 Homo sapiens chromosome 19, cosmid F19415, complete sequence Length = 45896 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 ttcacagtttccctgcacag 172 |||||||||||||||||||| Sbjct: 1321 ttcacagtttccctgcacag 1340
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 tgagatgtttctaaacagat 27 |||||||||||||||||||| Sbjct: 1466546 tgagatgtttctaaacagat 1466527
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 651 gctgtgggaggcacaccaga 670 |||||||||||||||||||| Sbjct: 1723197 gctgtgggaggcacaccaga 1723216
>dbj|AB007132.1| Streptoverticillium cinnamoneum gene for Phospholipase D, complete cds Length = 1868 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 gtgagacctcgcgcagcgcc 214 |||||||||||||||||||| Sbjct: 364 gtgagacctcgcgcagcgcc 345 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,899,295 Number of Sequences: 3902068 Number of extensions: 4899295 Number of successful extensions: 101243 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100892 Number of HSP's gapped (non-prelim): 331 length of query: 670 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 647 effective length of database: 17,143,297,704 effective search space: 11091713614488 effective search space used: 11091713614488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)