ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24k04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GP179_HUMAN (Q6PRD1) Probable G-protein coupled receptor 179 pre... 29 4.2

>GP179_HUMAN (Q6PRD1) Probable G-protein coupled receptor 179 precursor|
           (Probable G-protein coupled receptor 158-like 1)
          Length = 2367

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 104 PRGCPACELAVDCXSAAVALLMXTLHACVRCSMM 3
           P GC +C  A  C     A+L   + AC  C M+
Sbjct: 360 PEGCTSCMDATPCLVEEAAVLRAAVLACQACCML 393


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,424,336
Number of Sequences: 219361
Number of extensions: 46490
Number of successful extensions: 92
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 80,573,946
effective HSP length: 10
effective length of database: 78,380,336
effective search space used: 1881128064
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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