>emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b
            binding (CAB) protein of photosystem II (PSII)
          Length = 2689

 Score =  157 bits (79), Expect = 7e-36
 Identities = 99/104 (95%), Gaps = 2/104 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    cacatcatgctgcatcgcacgcacgcatgcagcgtgancatcaacagcgcgacggcggcg 60
            ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||
Sbjct: 2325 cacatcatgctgcatcgcacgcacgcatgcagc-tgagcatcaacagc-cgacggcggcg 2268

                                                        
Query: 61   gacnggcaatcaacngccagctcacaggctgggcaccctctcgg 104
            ||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 2267 gacgggcaatcaacggccagctcacaggctgggcaccctctcgg 2224

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 42     caacagcgcgacggcggcgga 62
              |||||||||||||||||||||
Sbjct: 952354 caacagcgcgacggcggcgga 952334

>gb|AC139637.17| Mus musculus chromosome 15, clone RP24-253M12, complete sequence
          Length = 136076

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    caggctgggcaccctctcgg 104
             ||||||||||||||||||||
Sbjct: 97871 caggctgggcaccctctcgg 97852

>ref|NM_001039970.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5
            (striatum-enriched) (PTPN5), transcript variant 3, mRNA
          Length = 3105

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   ctcacaggctgggcaccctc 100
            ||||||||||||||||||||
Sbjct: 2657 ctcacaggctgggcaccctc 2638

>ref|NM_032781.3| Homo sapiens protein tyrosine phosphatase, non-receptor type 5
            (striatum-enriched) (PTPN5), transcript variant 2, mRNA
          Length = 3156

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   ctcacaggctgggcaccctc 100
            ||||||||||||||||||||
Sbjct: 2708 ctcacaggctgggcaccctc 2689

>ref|NM_006906.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5
            (striatum-enriched) (PTPN5), transcript variant 1, mRNA
          Length = 3201

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   ctcacaggctgggcaccctc 100
            ||||||||||||||||||||
Sbjct: 2753 ctcacaggctgggcaccctc 2734

>gb|AC142474.4| Mus musculus BAC clone RP24-362N7 from chromosome 15, complete sequence
          Length = 172879

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     caggctgggcaccctctcgg 104
              ||||||||||||||||||||
Sbjct: 152256 caggctgggcaccctctcgg 152275

>gb|BC046435.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5
            (striatum-enriched), mRNA (cDNA clone IMAGE:5198635),
            partial cds
          Length = 1680

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   ctcacaggctgggcaccctc 100
            ||||||||||||||||||||
Sbjct: 1232 ctcacaggctgggcaccctc 1213

>gb|BC064807.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5
            (striatum-enriched), transcript variant 1, mRNA (cDNA
            clone MGC:65158 IMAGE:5726473), complete cds
          Length = 2947

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   ctcacaggctgggcaccctc 100
            ||||||||||||||||||||
Sbjct: 2517 ctcacaggctgggcaccctc 2498

>gb|BC039897.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5
            (striatum-enriched), mRNA (cDNA clone IMAGE:5196107),
            partial cds
          Length = 2860

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   ctcacaggctgggcaccctc 100
            ||||||||||||||||||||
Sbjct: 2416 ctcacaggctgggcaccctc 2397

>emb|AL832541.1|HSM803850 Homo sapiens mRNA; cDNA DKFZp547A0817 (from clone DKFZp547A0817)
          Length = 3149

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   ctcacaggctgggcaccctc 100
            ||||||||||||||||||||
Sbjct: 2751 ctcacaggctgggcaccctc 2732

>dbj|AK127312.1| Homo sapiens cDNA FLJ45381 fis, clone BRHIP3021019, highly  similar
            to Protein-tyrosine phosphatase, non-receptor type 5 (EC
            3.1.3.48)
          Length = 3871

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   ctcacaggctgggcaccctc 100
            ||||||||||||||||||||
Sbjct: 3491 ctcacaggctgggcaccctc 3472

>dbj|AK090923.1| Homo sapiens cDNA FLJ33604 fis, clone BRAMY2015251, highly similar to
            PROTEIN-TYROSINE PHOSPHATASE STRIATUM-ENRICHED (EC
            3.1.3.48)
          Length = 2965

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   ctcacaggctgggcaccctc 100
            ||||||||||||||||||||
Sbjct: 2617 ctcacaggctgggcaccctc 2598

>dbj|AK027333.1| Homo sapiens cDNA FLJ14427 fis, clone HEMBA1006173
          Length = 1074

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 81  ctcacaggctgggcaccctc 100
           ||||||||||||||||||||
Sbjct: 694 ctcacaggctgggcaccctc 675

>dbj|AK055450.1| Homo sapiens cDNA FLJ30888 fis, clone FEBRA2005079, highly similar to
            PROTEIN-TYROSINE PHOSPHATASE STRIATUM-ENRICHED (EC
            3.1.3.48)
          Length = 2299

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   ctcacaggctgggcaccctc 100
            ||||||||||||||||||||
Sbjct: 1919 ctcacaggctgggcaccctc 1900

>gb|AC103974.6| Homo sapiens chromosome 11, clone RP11-1081L13, complete sequence
          Length = 189230

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     ctcacaggctgggcaccctc 100
              ||||||||||||||||||||
Sbjct: 153760 ctcacaggctgggcaccctc 153741

>gb|BC047349.1| Mus musculus, clone IMAGE:3595895, mRNA
          Length = 1680

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   ctcacaggctgggcaccctc 100
            ||||||||||||||||||||
Sbjct: 1232 ctcacaggctgggcaccctc 1213

>dbj|AB060245.1| Macaca fascicularis brain cDNA clone:QflA-15249, full insert sequence
          Length = 2837

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   ctcacaggctgggcaccctc 100
            ||||||||||||||||||||
Sbjct: 2441 ctcacaggctgggcaccctc 2422

>gb|AC158983.2| Mus musculus BAC clone RP23-264L8 from chromosome 14, complete sequence
          Length = 218519

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 16     cgcacgcacgcatgcagcg 34
              |||||||||||||||||||
Sbjct: 164796 cgcacgcacgcatgcagcg 164814

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 13      catcgcacgcacgcatgca 31
               |||||||||||||||||||
Sbjct: 2903237 catcgcacgcacgcatgca 2903219

>dbj|AK122706.1| Homo sapiens cDNA FLJ16184 fis, clone BRTHA2005579, weakly  similar
            to Xenopus laevis mRNA for Kielin
          Length = 2774

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 77   ccagctcacaggctgggca 95
            |||||||||||||||||||
Sbjct: 1322 ccagctcacaggctgggca 1304

>dbj|AK095464.1| Homo sapiens cDNA FLJ38145 fis, clone D9OST2003580
          Length = 2248

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 77  ccagctcacaggctgggca 95
           |||||||||||||||||||
Sbjct: 796 ccagctcacaggctgggca 778

>gb|AE012052.1| Xanthomonas axonopodis pv. citri str. 306,  section 430 of 469 of the
            complete genome
          Length = 10967

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 42   caacagcgcgacggcggcg 60
            |||||||||||||||||||
Sbjct: 7417 caacagcgcgacggcggcg 7435

>ref|XM_929907.1| PREDICTED: Homo sapiens cysteine rich BMP regulator 2 (chordin-like)
            (CRIM2), mRNA
          Length = 5097

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 77   ccagctcacaggctgggca 95
            |||||||||||||||||||
Sbjct: 1357 ccagctcacaggctgggca 1339

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 13      catcgcacgcacgcatgca 31
               |||||||||||||||||||
Sbjct: 2924963 catcgcacgcacgcatgca 2924945

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 45      cagcgcgacggcggcggac 63
               |||||||||||||||||||
Sbjct: 1819259 cagcgcgacggcggcggac 1819277


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 556,553
Number of Sequences: 3902068
Number of extensions: 556553
Number of successful extensions: 52506
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52297
Number of HSP's gapped (non-prelim): 208
length of query: 106
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 85
effective length of database: 17,151,101,840
effective search space: 1457843656400
effective search space used: 1457843656400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)