Clone Name | rbasd24k01 |
---|---|
Clone Library Name | barley_pub |
>ATPF_WHEAT (P06528) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 183 Score = 100 bits (248), Expect = 4e-21 Identities = 49/53 (92%), Positives = 49/53 (92%) Frame = +3 Query: 369 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGV L Sbjct: 1 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVLKDLL 53
>ATPF_ORYSA (P12087) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 180 Score = 99.0 bits (245), Expect = 8e-21 Identities = 48/53 (90%), Positives = 49/53 (92%) Frame = +3 Query: 369 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLI+FGKGV L Sbjct: 1 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIYFGKGVLKDLL 53
>ATPF_ORYNI (Q6ENH8) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 183 Score = 99.0 bits (245), Expect = 8e-21 Identities = 48/53 (90%), Positives = 49/53 (92%) Frame = +3 Query: 369 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLI+FGKGV L Sbjct: 1 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIYFGKGVLKDLL 53
>ATPF_SACOF (Q6ENW7) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 183 Score = 97.8 bits (242), Expect = 2e-20 Identities = 48/53 (90%), Positives = 48/53 (90%) Frame = +3 Query: 369 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 MKNVTHSFVFLAHWP AGSFGLNTDILATNLINLTVVVGVLIFFGKGV L Sbjct: 1 MKNVTHSFVFLAHWPFAGSFGLNTDILATNLINLTVVVGVLIFFGKGVLKDLL 53
>ATPF_SACHY (P0C156) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 183 Score = 97.8 bits (242), Expect = 2e-20 Identities = 48/53 (90%), Positives = 48/53 (90%) Frame = +3 Query: 369 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 MKNVTHSFVFLAHWP AGSFGLNTDILATNLINLTVVVGVLIFFGKGV L Sbjct: 1 MKNVTHSFVFLAHWPFAGSFGLNTDILATNLINLTVVVGVLIFFGKGVLKDLL 53
>ATPF_MAIZE (P48186) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 183 Score = 97.8 bits (242), Expect = 2e-20 Identities = 48/53 (90%), Positives = 48/53 (90%) Frame = +3 Query: 369 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 MKNVTHSFVFLAHWP AGSFGLNTDILATNLINLTVVVGVLIFFGKGV L Sbjct: 1 MKNVTHSFVFLAHWPFAGSFGLNTDILATNLINLTVVVGVLIFFGKGVLKDLL 53
>ATPF_SPIOL (P06453) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 184 Score = 91.7 bits (226), Expect = 1e-18 Identities = 44/53 (83%), Positives = 47/53 (88%) Frame = +3 Query: 369 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 MKNVT SFVFL HWPSAGSFG NTDILATNLINL+VV+GVLIFFGKGV + L Sbjct: 1 MKNVTDSFVFLGHWPSAGSFGFNTDILATNLINLSVVLGVLIFFGKGVLSDLL 53
>ATPF_TOBAC (P06290) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 184 Score = 88.6 bits (218), Expect = 1e-17 Identities = 43/53 (81%), Positives = 46/53 (86%) Frame = +3 Query: 369 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 MKNVT SFV L HWPSAGSFG NTDILATNLINL+VV+GVLIFFGKGV + L Sbjct: 1 MKNVTDSFVSLGHWPSAGSFGFNTDILATNLINLSVVLGVLIFFGKGVLSDLL 53
>ATPF_ARATH (P56759) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 184 Score = 84.7 bits (208), Expect = 2e-16 Identities = 40/48 (83%), Positives = 43/48 (89%) Frame = +3 Query: 369 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGV 512 MKN+T SFV+L HWPSAGSFG NTDILATN INL+VV GVLIFFGKGV Sbjct: 1 MKNLTDSFVYLGHWPSAGSFGFNTDILATNPINLSVVFGVLIFFGKGV 48
>ATPF_OENHO (Q9MTL8) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 184 Score = 82.8 bits (203), Expect = 6e-16 Identities = 41/53 (77%), Positives = 44/53 (83%) Frame = +3 Query: 369 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 MKNVT SFV L HWPSAGSFG NTDILATN INL+VV+GVLI FGKGV + L Sbjct: 1 MKNVTDSFVSLVHWPSAGSFGFNTDILATNPINLSVVLGVLICFGKGVLSDLL 53
>ATPF_LOTJA (Q9BBS4) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 184 Score = 79.3 bits (194), Expect = 7e-15 Identities = 37/53 (69%), Positives = 43/53 (81%) Frame = +3 Query: 369 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 MKN+T F L +WPSAGSFG NTDILATN INL++V+GVLIFFGKGV + L Sbjct: 1 MKNITDPFPCLGYWPSAGSFGFNTDILATNPINLSIVIGVLIFFGKGVLSDLL 53
>ATPF_PINTH (O62939) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 184 Score = 69.7 bits (169), Expect = 5e-12 Identities = 32/53 (60%), Positives = 42/53 (79%) Frame = +3 Query: 369 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 MKNV F+ L++WPSAG FG NT+IL TN+IN +VV+ VLI+FGKGV ++ L Sbjct: 1 MKNVIDPFISLSYWPSAGGFGSNTNILETNIINSSVVLSVLIYFGKGVLSNLL 53
>ATPF_MARPO (P06291) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 184 Score = 62.0 bits (149), Expect = 1e-09 Identities = 29/53 (54%), Positives = 40/53 (75%) Frame = +3 Query: 369 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 M+N T+ + W AGSFGLNT++L TNLINL VV+G+L++FGKGV ++ L Sbjct: 1 MENGTYFIISSNFWTIAGSFGLNTNLLETNLINLGVVLGLLVYFGKGVLSNLL 53
>ATPF_PEA (P08214) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 172 Score = 56.6 bits (135), Expect = 5e-08 Identities = 27/36 (75%), Positives = 31/36 (86%) Frame = +3 Query: 420 GSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 GSFG +TDILATNLINL+ V+GVLIFFGKGV + L Sbjct: 7 GSFGFDTDILATNLINLSAVLGVLIFFGKGVLSDLL 42
>ATPF_ANTFO (Q85AL8) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 184 Score = 50.8 bits (120), Expect = 3e-06 Identities = 25/53 (47%), Positives = 35/53 (66%) Frame = +3 Query: 369 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 M+N+ + W A F LNT++L TNLINL VV+G+L++FGKGV + L Sbjct: 1 MRNLIFFVIPFHFWLPAEGFKLNTNLLETNLINLGVVLGLLVYFGKGVLNNLL 53
>ATPF_ADICA (Q85FN3) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 184 Score = 50.4 bits (119), Expect = 3e-06 Identities = 22/53 (41%), Positives = 36/53 (67%) Frame = +3 Query: 369 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 M++++ ++W AG+ GLNT+I NLINL +V+G+L ++GKGV + L Sbjct: 1 MRSLSEIIAPSSYWTLAGTIGLNTNIFEINLINLILVLGILFYYGKGVLINLL 53
>ATPF_SYNP1 (Q05365) ATP synthase B chain (EC 3.6.3.14) (Subunit I)| Length = 176 Score = 50.1 bits (118), Expect = 4e-06 Identities = 21/45 (46%), Positives = 31/45 (68%) Frame = +3 Query: 393 VFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 V L G FGLNT++L TN+INL +++GVL++FG+G+ L Sbjct: 4 VILMATEEVGHFGLNTNLLETNVINLAIIIGVLVYFGRGLLGKTL 48
>ATPF_SYNP6 (P08447) ATP synthase B chain (EC 3.6.3.14) (Subunit I)| Length = 171 Score = 48.1 bits (113), Expect = 2e-05 Identities = 21/47 (44%), Positives = 34/47 (72%) Frame = +3 Query: 387 SFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 S++ LAH ++G FGLN D+ TNLINL +++G+L++ G+G + L Sbjct: 3 SWILLAHAETSG-FGLNLDLFETNLINLAIIIGLLVYAGRGFLGNLL 48
>ATPF_ANASP (P12407) ATP synthase B chain (EC 3.6.3.14) (Subunit I)| Length = 187 Score = 45.4 bits (106), Expect = 1e-04 Identities = 22/43 (51%), Positives = 29/43 (67%) Frame = +3 Query: 399 LAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 LA + G FGLNT+IL TNLINL +++ VL FG+ V + L Sbjct: 18 LAEGGAEGGFGLNTNILDTNLINLAIIITVLFVFGRKVLGNTL 60
>ATPF_MESVI (Q9MUT1) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 186 Score = 43.5 bits (101), Expect = 4e-04 Identities = 21/50 (42%), Positives = 30/50 (60%) Frame = +3 Query: 378 VTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 +T+ F L+ A FG NTDI TN++NL VV+G+L+ G+ S L Sbjct: 5 LTNIFTILSRMSLAEGFGFNTDIFETNILNLAVVLGILLTSGREFFVSLL 54
>ATPF_EUGGR (P30393) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 183 Score = 42.0 bits (97), Expect = 0.001 Identities = 16/31 (51%), Positives = 25/31 (80%) Frame = +3 Query: 414 SAGSFGLNTDILATNLINLTVVVGVLIFFGK 506 +A +FG+NT++ TN+INL +VVG L ++GK Sbjct: 14 NAKTFGINTNVFETNIINLAIVVGTLFYYGK 44
>ATPF_ODOSI (Q00822) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 179 Score = 40.8 bits (94), Expect = 0.003 Identities = 23/55 (41%), Positives = 30/55 (54%) Frame = +3 Query: 369 MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCLFQ 533 M+N F LA GLNTDIL T +IN+ +VG+LI+ G+ S L Q Sbjct: 1 MENFNQIFTLLAE---NEGIGLNTDILETGIINIAALVGILIYAGRDFLGSFLEQ 52
>ATPF_NEPOL (Q9TL15) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 176 Score = 38.9 bits (89), Expect = 0.010 Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +3 Query: 390 FVFLAHWPSAGS--FGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 F FLA P A S FGLNT+IL TN++NL V +L + G +S L Sbjct: 2 FHFLALTPLAHSEGFGLNTNILETNILNLAAVFALLAYVGTDFVSSLL 49
>ATPF_SYNY3 (P27181) ATP synthase B chain (EC 3.6.3.14) (Subunit I)| Length = 179 Score = 38.1 bits (87), Expect = 0.017 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = +3 Query: 402 AHWPSAGSFGLNTDILATNLINLTVVVGVLIFF 500 AH G FG+N D L NL NL +++G++I++ Sbjct: 12 AHEAGEGGFGINLDFLEANLFNLAILLGIIIYY 44
>ATPF_CHLRE (Q8HTL5) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 175 Score = 37.4 bits (85), Expect = 0.029 Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 1/32 (3%) Frame = +3 Query: 420 GSFGLNTDILATNLINLTVVVGVLI-FFGKGV 512 G FG NT++ TN+INL VVG+++ F GK + Sbjct: 14 GGFGFNTNVFETNIINLAAVVGIVVSFVGKNL 45
>ATPF_CYAPA (P48084) ATP synthase B chain (EC 3.6.3.14) (Subunit I)| Length = 185 Score = 36.2 bits (82), Expect = 0.065 Identities = 17/27 (62%), Positives = 21/27 (77%) Frame = +3 Query: 426 FGLNTDILATNLINLTVVVGVLIFFGK 506 F LNTDIL TNLINL V+ +LI+ G+ Sbjct: 25 FSLNTDILETNLINLLVIFFLLIYQGR 51
>ATPF_CHLVU (P56296) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 175 Score = 34.7 bits (78), Expect = 0.19 Identities = 13/28 (46%), Positives = 22/28 (78%) Frame = +3 Query: 417 AGSFGLNTDILATNLINLTVVVGVLIFF 500 AG FG NT++L TN++NL VV+ +++ + Sbjct: 10 AGHFGFNTNLLETNVLNLAVVLAIVLTY 37
>ATPF_GALSU (P35011) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 176 Score = 33.1 bits (74), Expect = 0.55 Identities = 14/39 (35%), Positives = 25/39 (64%) Frame = +3 Query: 390 FVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGK 506 F L + S S +N D+L TN+IN+ +++ +LI+ G+ Sbjct: 3 FDVLGYENSQSSIKINLDLLETNIINIFILIIILIYLGR 41
>ATPF_PORPU (P51244) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 183 Score = 32.7 bits (73), Expect = 0.72 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = +3 Query: 375 NVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCL 527 N+T + L+ S +FG N+DI N+IN+ +++ LI+ K S L Sbjct: 6 NITPIIIILSEHSSEHTFGFNSDIFEANVINILLLLFGLIYVLKQSLGSTL 56
>ATPF_OCHNE (Q40609) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)| Length = 178 Score = 30.4 bits (67), Expect = 3.6 Identities = 13/51 (25%), Positives = 24/51 (47%) Frame = +3 Query: 381 THSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVCASCLFQ 533 T + V + + G N DI TN++NL ++ G + + G + L + Sbjct: 5 TQTLVRFSSLIADGGVSFNPDIFETNVVNLAILTGGIFYLGSNALSESLVE 55
>VP4_ROTPG (P23045) Outer capsid protein VP4 (Hemagglutinin) (Outer layer| protein VP4) [Contains: Outer capsid protein VP8; Outer capsid protein VP5] Length = 775 Score = 29.3 bits (64), Expect = 7.9 Identities = 21/58 (36%), Positives = 27/58 (46%) Frame = +2 Query: 59 DR*YRILGRAELSMINLEDMLAFLFPVLSLGKWKVFSFYFRNFGNGTFQQRKPFTGQT 232 DR Y + G E+ I +E+ S KWK F FRN N FQ ++P T T Sbjct: 116 DRQYTLFG--EVKQITVEN---------SSDKWKFFEM-FRNNANIDFQLQRPLTSDT 161 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,565,263 Number of Sequences: 219361 Number of extensions: 1244654 Number of successful extensions: 2351 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 2319 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2351 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4585734400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)