ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24j18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Trit... 460 e-126
2gb|AF117660.1|AF117660 Triticum aestivum S-adenosylmethionine de... 424 e-116
3emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 50 0.005
4emb|Y07766.2|OSSADMEDC O.sativa mRNA for S-adenosylmethionine de... 50 0.005
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
6gb|AF067194.1|AF067194 Oryza sativa S-adenosylmethionine decarbo... 50 0.005
7dbj|AK100589.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
8dbj|AK098918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
9dbj|AK072162.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
10dbj|AK067166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
11dbj|AK062001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
12emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 50 0.005
13emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,... 50 0.005
14gb|BT016840.1| Zea mays clone Contig673 mRNA sequence 42 1.3
15gb|AC125203.3| Mus musculus BAC clone RP23-233M21 from 19, compl... 42 1.3
16emb|Y07767.1|ZMSADMEDC Z.mays mRNA for S-adenosylmethionine deca... 42 1.3
17emb|AL591979.1| Listeria monocytogenes strain EGD, complete geno... 42 1.3
18gb|AY103590.1| Zea mays PCO098412 mRNA sequence 42 1.3
19dbj|AB023064.1| Listeria monocytogenes DNA for DnaK operon, comp... 42 1.3
20ref|XM_473046.1| Oryza sativa (japonica cultivar-group), predic... 40 5.0
21gb|BT018615.1| Zea mays clone EL01N0501D02.d mRNA sequence 40 5.0
22emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 40 5.0
23dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
24gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 5.0
25gb|AY966487.1| Oryza sativa (indica cultivar-group) S-adenosylme... 40 5.0
26dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
27dbj|AB122089.1| Oryza sativa (japonica cultivar-group) SAMDC1 g... 40 5.0
28dbj|AK102445.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
29dbj|AK101535.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
30dbj|AK100397.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
31dbj|AK067682.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
32emb|AJ698342.1| Megathura crenulata KLH2 gene for hemocyanin 2, ... 40 5.0 
>emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for
            S-adenosylmethionine decarboxylase
          Length = 1893

 Score =  460 bits (232), Expect = e-126
 Identities = 340/374 (90%), Gaps = 18/374 (4%)
 Strand = Plus / Minus

                                                                        
Query: 10   aacagtacgctcattgtggcagacgcagnaaaccacctagagctaatagtttattcagag 69
            ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1852 aacagtatgctcattgtggcagacgcagcaaaccacctagagctaatagtttattcagag 1793

                                                                        
Query: 70   tagcaatagcctggccggctgcttcacagtaaccaaaacgacaaacg---gaagtcagaa 126
            |||||||||||||||||||||||||||||||||| |||||||  |||     ||||||||
Sbjct: 1792 tagcaatagcctggccggctgcttcacagtaacc-aaacgacgcacgacaacagtcagaa 1734

                                                                        
Query: 127  cgaattccacagacggaacagcgacagcaaaaatcatcttatcactcgcacagcaccgc- 185
            |||||| |||||||||||||||||||||  ||||||||||||||||||||||||| ||| 
Sbjct: 1733 cgaattacacagacggaacagcgacagc--aaatcatcttatcactcgcacagcaacgcg 1676

                                                                        
Query: 186  -----gccctcctccagagaatcctcctccgcccgccatgcgagcaggttggcaagcttg 240
                 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1675 cctgtgccctcctcgagagactcctcctccgcccgccatgcgagcaggttggcaagcttg 1616

                                                                        
Query: 241  ccttccttgaccagagggtggccgctctccacattctcgccctcgaagcagtggaagacg 300
            |||||||||||||||||||||||||||||||||||      |||||||||||||||||| 
Sbjct: 1615 ccttccttgaccagagggtggccgctctccacatt------ctcgaagcagtggaagaca 1562

                                                                        
Query: 301  gacctgggcgacccggcggagacagcaacctcttcattcgcggtaaagctctggtagatg 360
            ||||||||||||||||| |||||||||| |||||| ||||||| ||||||||||||||||
Sbjct: 1561 gacctgggcgacccggcagagacagcaagctcttcgttcgcggcaaagctctggtagatg 1502

                          
Query: 361  aggacgcccccgca 374
            |||||||| |||||
Sbjct: 1501 aggacgccaccgca 1488
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>gb|AF117660.1|AF117660 Triticum aestivum S-adenosylmethionine decarboxylase precursor, mRNA,
            complete cds
          Length = 1386

 Score =  424 bits (214), Expect = e-116
 Identities = 312/339 (92%), Gaps = 8/339 (2%)
 Strand = Plus / Minus

                                                                        
Query: 41   accacctagagctaatagtttattcagagtagcaatagcctggccggctgcttcacagta 100
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1378 accacctagagctaatagtttattcagag-agcaatagcctggccggctgcttcacagta 1320

                                                                        
Query: 101  accaaaacgacaaacgga-agtcagaacgaattccacagacggaacagcgacagcaaaaa 159
            |||||| |||||||| || ||||||||| ||||||||||| |||| ||||||||||||  
Sbjct: 1319 accaaa-cgacaaactgacagtcagaacaaattccacagatggaatagcgacagcaaa-- 1263

                                                                        
Query: 160  tcatcttatcactcgcacagcaccgcgccctcctccagagaatcctcctccgcccgccat 219
            |||| |  |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1262 tcatgtcttcactcgcacagcaccgcgccctcttccagagaatcctcctccgcccgccat 1203

                                                                        
Query: 220  gcgagcaggttggcaagcttgccttccttgaccagagggtggccgctctccacattctcg 279
            ||||| |||||||| ||||||||||||||||||||||||||   ||| | |||| |||||
Sbjct: 1202 gcgaggaggttggcgagcttgccttccttgaccagagggtg---gctgtgcacactctcg 1146

                                                                        
Query: 280  ccctcgaagcagtggaagacggacctgggcgacccggcggagacagcaacctcttcattc 339
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 1145 gcctcgaagcagtggaagacggacctgggcgacccggcagagacagcaacctcttcgttc 1086

                                                   
Query: 340  gcggtaaagctctggtagatgaggacgcccccgcagggg 378
             |||||||||||||||||||||||||||| || ||||||
Sbjct: 1085 acggtaaagctctggtagatgaggacgcctccacagggg 1047
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>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 18    gctcattgtggcagacgcagnaaaccacctagagct 53
             ||||||||||||||||||||   |||||||||||||
Sbjct: 13891 gctcattgtggcagacgcagctgaccacctagagct 13856



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 74    aatagcctggccggctgcttcacag 98
             ||||||||||| |||||||||||||
Sbjct: 13782 aatagcctggctggctgcttcacag 13758



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 346   aagctctggtagatgaggacgcccccgcaggg 377
             ||||||||||||||||||| ||| || |||||
Sbjct: 13505 aagctctggtagatgaggaggccaccacaggg 13474
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>emb|Y07766.2|OSSADMEDC O.sativa mRNA for S-adenosylmethionine decarboxylase
          Length = 2036

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 18   gctcattgtggcagacgcagnaaaccacctagagct 53
            ||||||||||||||||||||   |||||||||||||
Sbjct: 1950 gctcattgtggcagacgcagctgaccacctagagct 1915



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 74   aatagcctggccggctgcttcacag 98
            ||||||||||| |||||||||||||
Sbjct: 1841 aatagcctggctggctgcttcacag 1817



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 346  aagctctggtagatgaggacgcccccgcaggg 377
            ||||||||||||||||||| ||| || |||||
Sbjct: 1564 aagctctggtagatgaggaggccaccacaggg 1533
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                    
Query: 18       gctcattgtggcagacgcagnaaaccacctagagct 53
                ||||||||||||||||||||   |||||||||||||
Sbjct: 24893306 gctcattgtggcagacgcagctgaccacctagagct 24893271



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 74       aatagcctggccggctgcttcacag 98
                ||||||||||| |||||||||||||
Sbjct: 24893197 aatagcctggctggctgcttcacag 24893173



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 346      aagctctggtagatgaggacgcccccgcaggg 377
                ||||||||||||||||||| ||| || |||||
Sbjct: 24892920 aagctctggtagatgaggaggccaccacaggg 24892889
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>gb|AF067194.1|AF067194 Oryza sativa S-adenosylmethionine decarboxylase mRNA, complete cds
          Length = 1560

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 18   gctcattgtggcagacgcagnaaaccacctagagct 53
            ||||||||||||||||||||   |||||||||||||
Sbjct: 1501 gctcattgtggcagacgcagctgaccacctagagct 1466



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 74   aatagcctggccggctgcttcacag 98
            ||||||||||| |||||||||||||
Sbjct: 1392 aatagcctggctggctgcttcacag 1368



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 346  aagctctggtagatgaggacgcccccgcaggg 377
            ||||||||||||||||||| ||| || |||||
Sbjct: 1115 aagctctggtagatgaggaggccgccacaggg 1084
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>dbj|AK100589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106D22, full
            insert sequence
          Length = 2063

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 18   gctcattgtggcagacgcagnaaaccacctagagct 53
            ||||||||||||||||||||   |||||||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctagagct 1959



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 74   aatagcctggccggctgcttcacag 98
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 346  aagctctggtagatgaggacgcccccgcaggg 377
            ||||||||||||||||||| ||| || |||||
Sbjct: 1608 aagctctggtagatgaggaggccaccacaggg 1577
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>dbj|AK098918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M21, full
            insert sequence
          Length = 2059

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 18   gctcattgtggcagacgcagnaaaccacctagagct 53
            ||||||||||||||||||||   |||||||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctagagct 1959



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 74   aatagcctggccggctgcttcacag 98
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 346  aagctctggtagatgaggacgcccccgcaggg 377
            ||||||||||||||||||| ||| || |||||
Sbjct: 1608 aagctctggtagatgaggaggccaccacaggg 1577
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>dbj|AK072162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129L10, full
            insert sequence
          Length = 2711

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 18   gctcattgtggcagacgcagnaaaccacctagagct 53
            ||||||||||||||||||||   |||||||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctagagct 1959



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 74   aatagcctggccggctgcttcacag 98
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 346  aagctctggtagatgaggacgcccccgcaggg 377
            ||||||||||||||||||| ||| || |||||
Sbjct: 1608 aagctctggtagatgaggaggccaccacaggg 1577
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>dbj|AK067166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096P09, full
            insert sequence
          Length = 2063

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 18   gctcattgtggcagacgcagnaaaccacctagagct 53
            ||||||||||||||||||||   |||||||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctagagct 1959



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 74   aatagcctggccggctgcttcacag 98
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 346  aagctctggtagatgaggacgcccccgcaggg 377
            ||||||||||||||||||| ||| || |||||
Sbjct: 1608 aagctctggtagatgaggaggccaccacaggg 1577
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>dbj|AK062001.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D05, full
            insert sequence
          Length = 1217

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 18   gctcattgtggcagacgcagnaaaccacctagagct 53
            ||||||||||||||||||||   |||||||||||||
Sbjct: 1152 gctcattgtggcagacgcagctgaccacctagagct 1117



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 74   aatagcctggccggctgcttcacag 98
            ||||||||||| |||||||||||||
Sbjct: 1043 aatagcctggctggctgcttcacag 1019



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 346 aagctctggtagatgaggacgcccccgcaggg 377
           ||||||||||||||||||| ||| || |||||
Sbjct: 766 aagctctggtagatgaggaggccaccacaggg 735
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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 18    gctcattgtggcagacgcagnaaaccacctagagct 53
             ||||||||||||||||||||   |||||||||||||
Sbjct: 13919 gctcattgtggcagacgcagctgaccacctagagct 13884



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 74    aatagcctggccggctgcttcacag 98
             ||||||||||| |||||||||||||
Sbjct: 13810 aatagcctggctggctgcttcacag 13786
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>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
              complete sequence
          Length = 170765

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                  
Query: 18     gctcattgtggcagacgcagnaaaccacctagagct 53
              ||||||||||||||||||||   |||||||||||||
Sbjct: 155022 gctcattgtggcagacgcagctgaccacctagagct 154987



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 74     aatagcctggccggctgcttcacag 98
              ||||||||||| |||||||||||||
Sbjct: 154913 aatagcctggctggctgcttcacag 154889



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 346    aagctctggtagatgaggacgcccccgcaggg 377
              ||||||||||||||||||| ||| || |||||
Sbjct: 154636 aagctctggtagatgaggaggccaccacaggg 154605
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>gb|BT016840.1| Zea mays clone Contig673 mRNA sequence
          Length = 1866

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 18  gctcattgtggcagacgcagnaaaccacctagagct 53
           ||||||||||| ||||||||   |||||||||||||
Sbjct: 109 gctcattgtggtagacgcagctgaccacctagagct 144



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 265 ctctccacattctcgccctcgaagcagtggaa 296
           |||||||| |||||||| || |||||||||||
Sbjct: 432 ctctccacgttctcgccgtcaaagcagtggaa 463
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>gb|AC125203.3| Mus musculus BAC clone RP23-233M21 from 19, complete sequence
          Length = 191540

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 239   tgccttccttgaccagagggt 259
             |||||||||||||||||||||
Sbjct: 51033 tgccttccttgaccagagggt 51053
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>emb|Y07767.1|ZMSADMEDC Z.mays mRNA for S-adenosylmethionine decarboxylase
          Length = 1873

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 18   gctcattgtggcagacgcagnaaaccacctagagct 53
            ||||||||||| ||||||||   |||||||||||||
Sbjct: 1789 gctcattgtggtagacgcagctgaccacctagagct 1754



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 265  ctctccacattctcgccctcgaagcagtggaa 296
            |||||||| |||||||| || |||||||||||
Sbjct: 1466 ctctccacgttctcgccgtcaaagcagtggaa 1435
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>emb|AL591979.1| Listeria monocytogenes strain EGD, complete genome, segment 7/12
          Length = 240050

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 193   tccagagaatcctcctccgcc 213
             |||||||||||||||||||||
Sbjct: 94892 tccagagaatcctcctccgcc 94912
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>gb|AY103590.1| Zea mays PCO098412 mRNA sequence
          Length = 2400

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 18   gctcattgtggcagacgcagnaaaccacctagagct 53
            ||||||||||| ||||||||   |||||||||||||
Sbjct: 2038 gctcattgtggtagacgcagctgaccacctagagct 2003



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 265  ctctccacattctcgccctcgaagcagtggaa 296
            |||||||| |||||||| || |||||||||||
Sbjct: 1715 ctctccacgttctcgccgtcaaagcagtggaa 1684
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>dbj|AB023064.1| Listeria monocytogenes DNA for DnaK operon, complete cds
          Length = 8881

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 193  tccagagaatcctcctccgcc 213
            |||||||||||||||||||||
Sbjct: 4201 tccagagaatcctcctccgcc 4181
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>ref|XM_473046.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1197

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 346  aagctctggtagatgaggacgcccccgcaggg 377
            ||||||||||||||||||| ||| || |||||
Sbjct: 1025 aagctctggtagatgaggaggccaccacaggg 994
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>gb|BT018615.1| Zea mays clone EL01N0501D02.d mRNA sequence
          Length = 2057

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 265  ctctccacattctcgccctcgaagcagtggaa 296
            |||||||| |||||||| || |||||||||||
Sbjct: 1646 ctctccacgttctcgccgtcaaagcagtggaa 1615
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>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 304    ctgggcgacccggcggagac 323
              ||||||||||||||||||||
Sbjct: 276909 ctgggcgacccggcggagac 276890
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                           
Query: 26       tggcagacgcagnaaaccacctagagc 52
                |||||||||||| |||||| |||||||
Sbjct: 15331175 tggcagacgcagcaaaccatctagagc 15331201
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    gagcaggttggcaagcttgc 241
              ||||||||||||||||||||
Sbjct: 494503 gagcaggttggcaagcttgc 494484
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>gb|AY966487.1| Oryza sativa (indica cultivar-group) S-adenosylmethionine
            decarboxylase mRNA, complete cds
          Length = 1197

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 346  aagctctggtagatgaggacgcccccgcaggg 377
            ||||||||||||||||||| ||| || |||||
Sbjct: 1025 aagctctggtagatgaggaggccgccacaggg 994
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>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0418B08
          Length = 165909

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 26     tggcagacgcagnaaaccacctagagc 52
              |||||||||||| |||||| |||||||
Sbjct: 110364 tggcagacgcagcaaaccatctagagc 110390
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>dbj|AB122089.1| Oryza sativa (japonica cultivar-group) SAMDC1  gene for
            S-adenosylmethionine decarboxylase, complete cds
          Length = 2952

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 26   tggcagacgcagnaaaccacctagagc 52
            |||||||||||| |||||| |||||||
Sbjct: 2817 tggcagacgcagcaaaccatctagagc 2791
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>dbj|AK102445.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093N21, full
            insert sequence
          Length = 2047

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 26   tggcagacgcagnaaaccacctagagc 52
            |||||||||||| |||||| |||||||
Sbjct: 1917 tggcagacgcagcaaaccatctagagc 1891
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>dbj|AK101535.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048C18, full
            insert sequence
          Length = 2002

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 26   tggcagacgcagnaaaccacctagagc 52
            |||||||||||| |||||| |||||||
Sbjct: 1918 tggcagacgcagcaaaccatctagagc 1892
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>dbj|AK100397.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086M03, full
            insert sequence
          Length = 2546

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 26   tggcagacgcagnaaaccacctagagc 52
            |||||||||||| |||||| |||||||
Sbjct: 2443 tggcagacgcagcaaaccatctagagc 2417
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>dbj|AK067682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116D10, full
            insert sequence
          Length = 2034

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 26   tggcagacgcagnaaaccacctagagc 52
            |||||||||||| |||||| |||||||
Sbjct: 1917 tggcagacgcagcaaaccatctagagc 1891
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>emb|AJ698342.1| Megathura crenulata KLH2 gene for hemocyanin 2, exons 1-17
          Length = 24990

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    tgcttcacagtaaccaaaac 108
             ||||||||||||||||||||
Sbjct: 19045 tgcttcacagtaaccaaaac 19064


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,598,248
Number of Sequences: 3902068
Number of extensions: 2598248
Number of successful extensions: 71806
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71680
Number of HSP's gapped (non-prelim): 121
length of query: 378
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 356
effective length of database: 17,147,199,772
effective search space: 6104403118832
effective search space used: 6104403118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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