Clone Name | rbasd24j13 |
---|---|
Clone Library Name | barley_pub |
>TBCE_XENLA (Q5U508) Tubulin-specific chaperone E (Tubulin-folding cofactor E)| Length = 522 Score = 30.8 bits (68), Expect = 2.7 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 5/92 (5%) Frame = -1 Query: 453 SGNNFLRVKIVNFGSDTVSLTISVSGLQASIN---ALGSNATVLTS-SNVKDENSFSNPT 286 +G +F+R+K NFG D ++ GL++ N +G L ++++E S N Sbjct: 65 TGGSFIRLKKANFGVDFLAALRKRYGLKSEQNEELVIGKKTVELVGFESIQEEQSKLNKL 124 Query: 285 KVVPVTS-QLHNAAEQMQVTLAAHSFSSFDLA 193 K V + + NA E+ Q+ + + + DL+ Sbjct: 125 KDVSLRECAVSNAGEKGQICHSCPNIMTADLS 156
>MOBA_BIFLO (Q8GN32) Probable mobilization protein MobA| Length = 565 Score = 30.8 bits (68), Expect = 2.7 Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 3/123 (2%) Frame = +1 Query: 181 GLSKRKVERGEGVGS--ERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENSSV*PQ 354 G + R +ER GV + + + R LT H+LG + +R+ L+ A Sbjct: 245 GYAARAIERAGGVSERCQTNREIRRSNDLLTAIRHELGRIFDRLGELFAAKIGQLRQRQA 304 Query: 355 RVDASLEPGHRDCEAHGVRP-EVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWMNHGT 531 R +A+ EP R E R E + G L D+R R R + W NHGT Sbjct: 305 RPEAAREPNWRYFEGDARRQLEADRADHAAALRGRLM-DARADVRNR----ETWWKNHGT 359 Query: 532 TRF 540 F Sbjct: 360 EEF 362
>CSH1_MOUSE (P18121) Chorionic somatomammotropin hormone 1 precursor (Placental| lactogen I) (PL-I) Length = 224 Score = 30.4 bits (67), Expect = 3.6 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Frame = -1 Query: 402 VSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQMQVT-- 229 + LT+++SG + G +L SS + EN S PT +VP AE + T Sbjct: 1 MQLTLNLSG------SAGMQLLLLVSSLLLWENVSSKPTAMVPTEDLYTRLAELLHNTFI 54 Query: 228 LAAHSFSSFDL 196 LAA + FDL Sbjct: 55 LAADVYREFDL 65
>C12AA_BACTU (Q45754) Pesticidal crystal protein cry12Aa (Insecticidal| delta-endotoxin CryXIIA(a)) (Crystaline entomocidal protoxin) (142 kDa crystal protein) Length = 1257 Score = 29.6 bits (65), Expect = 6.1 Identities = 15/68 (22%), Positives = 38/68 (55%) Frame = -1 Query: 423 VNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAE 244 V++G D+V+ ++ + + A+I + + +TS ++ ++N+F T ++++L N Sbjct: 697 VDYGKDSVADGLNFNKITATIPSDAWYSGTITSMHLFNDNNFKTITPKFELSNELENITT 756 Query: 243 QMQVTLAA 220 Q+ A+ Sbjct: 757 QVNALFAS 764
>RY44_DROME (Q24498) Ryanodine receptor 44F| Length = 5127 Score = 29.6 bits (65), Expect = 6.1 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 7/34 (20%) Frame = +1 Query: 211 EGVGSERDLH-------LFRGVMQLTCHGHDLGW 291 EG E+++H LFR + QLTC GH+L W Sbjct: 3997 EGAAGEKNMHDAEFTCALFRFI-QLTCEGHNLEW 4029
>ABFA_ASPNG (P42254) Alpha-N-arabinofuranosidase A precursor (EC 3.2.1.55)| (Arabinosidase A) (ABF A) Length = 628 Score = 29.3 bits (64), Expect = 7.9 Identities = 17/57 (29%), Positives = 30/57 (52%) Frame = -1 Query: 432 VKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQ 262 VK+ N+GS+T LT+S+ G TVL S D +++++ T+ + S+ Sbjct: 556 VKLANYGSETQDLTVSIPGTST------GKLTVLADS---DPDAYNSDTQTLVTPSE 603 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,609,412 Number of Sequences: 219361 Number of extensions: 1454583 Number of successful extensions: 3816 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3695 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3809 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4585734400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)