Clone Name | rbasd24j13 |
---|---|
Clone Library Name | barley_pub |
>gb|AF320325.1|AF320325 Hordeum vulgare arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II mRNA, complete cds Length = 2451 Score = 1106 bits (558), Expect = 0.0 Identities = 558/558 (100%) Strand = Plus / Minus Query: 1 tttagtactgctgtatgtatgagtatctcctctttcttacactgtacagtgagtgcttta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2404 tttagtactgctgtatgtatgagtatctcctctttcttacactgtacagtgagtgcttta 2345 Query: 61 tcaagatataagcataattactgacaagctcctccatttccatatcacgcctcgtgtatt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2344 tcaagatataagcataattactgacaagctcctccatttccatatcacgcctcgtgtatt 2285 Query: 121 aatcctgtttccacgtgtcactaacgccgtgtcgctgcttcacatctctgcgacaagctc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2284 aatcctgtttccacgtgtcactaacgccgtgtcgctgcttcacatctctgcgacaagctc 2225 Query: 181 ggactgagcaagcgcaaggtcgaacgaggagaaggagtgggcagcgagcgtgacctgcat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2224 ggactgagcaagcgcaaggtcgaacgaggagaaggagtgggcagcgagcgtgacctgcat 2165 Query: 241 ctgttccgcggcgttatgcaactgacttgtcacgggcacgaccttggttgggttactgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2164 ctgttccgcggcgttatgcaactgacttgtcacgggcacgaccttggttgggttactgaa 2105 Query: 301 agaattttcatcctttacattgctggacgtgagaacagtagcgtttgaccccagcgcgtt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2104 agaattttcatcctttacattgctggacgtgagaacagtagcgtttgaccccagcgcgtt 2045 Query: 361 gatgctagcctggagcccggacacagagattgtgaggctcacggtgtccgacccgaagtt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2044 gatgctagcctggagcccggacacagagattgtgaggctcacggtgtccgacccgaagtt 1985 Query: 421 cacaatctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1984 cacaatctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgc 1925 Query: 481 tagagaaccagagtagctggaactgattgtaattggatgaatcatggcaccactagattc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1924 tagagaaccagagtagctggaactgattgtaattggatgaatcatggcaccactagattc 1865 Query: 541 gcggaaaaacttctgcat 558 |||||||||||||||||| Sbjct: 1864 gcggaaaaacttctgcat 1847
>dbj|AK072576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131M13, full insert sequence Length = 2272 Score = 157 bits (79), Expect = 5e-35 Identities = 214/259 (82%) Strand = Plus / Minus Query: 290 gggttactgaaagaattttcatcctttacattgctggacgtgagaacagtagcgtttgac 349 |||||||| ||||| || |||||| | ||||||||||| |||| |||||| || |||| Sbjct: 1991 gggttactaaaagagttctcatccatcacattgctggatgtgataacagtggcagttgat 1932 Query: 350 cccagcgcgttgatgctagcctggagcccggacacagagattgtgaggctcacggtgtcc 409 ||||| ||||| | | ||||| ||||| | ||||||| ||||||||||| | || Sbjct: 1931 cccagtgcgttaacacgggcctgaagcccagttgcagagatcgtgaggctcactggatca 1872 Query: 410 gacccgaagttcacaatctttactctcaggaagttattcccggaatcctgccaggtgata 469 ||||| ||||| | |||||||||||| | |||| |||| | ||||||||||| || || Sbjct: 1871 gacccaaagtttataatctttactcttaagaagctattttcagaatcctgccaagtaatt 1812 Query: 470 gcagatgctgctagagaaccagagtagctggaactgattgtaattggatgaatcatggca 529 ||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| ||| Sbjct: 1811 gcagatgctgccagagaaccagagtagctggaagtgattgtaattggatgaaacatagca 1752 Query: 530 ccactagattcgcggaaaa 548 || |||||||| ||||||| Sbjct: 1751 ccgctagattcacggaaaa 1733 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 155 ctgcttcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgaggagaag 214 ||||||||||||||||| || || | |||||| ||||||||||| ||||| |||||||| Sbjct: 2126 ctgcttcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaa 2067 Query: 215 gagtgggcagcgagcgtgacctgcatctg 243 ||||| | ||| |||||||| |||||||| Sbjct: 2066 gagtgaggagcaagcgtgacttgcatctg 2038
>gb|AY106254.1| Zea mays PCO073074 mRNA sequence Length = 2589 Score = 141 bits (71), Expect = 3e-30 Identities = 314/395 (79%) Strand = Plus / Minus Query: 164 atctctgcgacaagctcggactgagcaagcgcaaggtcgaacgaggagaaggagtgggca 223 ||||| || ||||||| || || ||| ||||| || ||||| | || ||||||||| | | Sbjct: 2363 atctccgccacaagcttgggctcagccagcgccagatcgaaggcggtgaaggagtgagga 2304 Query: 224 gcgagcgtgacctgcatctgttccgcggcgttatgcaactgacttgtcacgggcacgacc 283 || ||||||||||||||||| ||||||||||| || ||| ||| |||| ||| | ||| Sbjct: 2303 gccagcgtgacctgcatctgctccgcggcgttgctcagctggcttttcaccggcgcaacc 2244 Query: 284 ttggttgggttactgaaagaattttcatcctttacattgctggacgtgagaacagtagcg 343 ||| | ||||||||||| || || || ||| | || |||| |||||||| || || ||| Sbjct: 2243 ttgttcgggttactgaaggagttctcgtccatgacgttgccagacgtgaggacggtggcg 2184 Query: 344 tttgaccccagcgcgttgatgctagcctggagcccggacacagagattgtgaggctcacg 403 |||| ||||||||||||| ||| ||| ||| ||| | |||| |||||| | ||| Sbjct: 2183 gttgatcccagcgcgttgacgctggccccgagtccgctcgtggagaccgtgaggttaacg 2124 Query: 404 gtgtccgacccgaagttcacaatctttactctcaggaagttattcccggaatcctgccag 463 |||||||||||||||||||| | ||| |||||||||||| ||||| | | ||||||||| Sbjct: 2123 gtgtccgacccgaagttcacgaccttcactctcaggaagctattctctgcatcctgccac 2064 Query: 464 gtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattggatgaatc 523 ||||| ||||| || || || |||| ||||| | ||||||||| ||| ||||||||| Sbjct: 2063 gtgatcgcagacgcggccagcgaactcgagtaccgggaactgatattaaccggatgaatc 2004 Query: 524 atggcaccactagattcgcggaaaaacttctgcat 558 ||||| || || || |||||||||| | ||||||| Sbjct: 2003 atggcgccgcttgactcgcggaaaatcgtctgcat 1969
>gb|BT017207.1| Zea mays clone EL01N0371H11.c mRNA sequence Length = 614 Score = 137 bits (69), Expect = 4e-29 Identities = 233/285 (81%), Gaps = 2/285 (0%) Strand = Plus / Minus Query: 275 ggcacgaccttggttgggttactgaaagaattttcatcctttacat-tgctggacgtgag 333 ||||| |||||||||||||| ||||| || ||||||||| | |||| ||||| | ||||| Sbjct: 310 ggcacaaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgag 252 Query: 334 aacagtagcgtttgaccccagcgcgttgatgctagcctggagcccggacacagagattgt 393 |||||| ||| |||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 251 aacagtggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgt 192 Query: 394 gaggctcacggtgtccgacccgaagttcacaatctttactctcaggaagttattcccgga 453 ||| |||| | || ||||||||||| | | ||||||||| |||||| | ||| |||| Sbjct: 191 cagggtcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcgga 132 Query: 454 atcctgccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaat 513 ||||||||||| || ||||| ||||| || ||||| ||||||||||| |||||||| | Sbjct: 131 gtcctgccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgt 72 Query: 514 tggatgaatcatggcaccactagattcgcggaaaaacttctgcat 558 |||||| | ||| ||||||||||| |||||||||| | ||||||| Sbjct: 71 tggatggaacatagcaccactagactcgcggaaaagcgtctgcat 27 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 160 tcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgaggagaaggagtg 219 ||||||||| || ||||||| ||||||||| || || || ||||||||| ||||||| | Sbjct: 425 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 366 Query: 220 ggcagcgagcgtgacctgcatctg 243 | ||| ||||||||||||||||| Sbjct: 365 aggagccagcgtgacctgcatctg 342
>gb|AY105192.1| Zea mays PCO073073 mRNA sequence Length = 1200 Score = 137 bits (69), Expect = 4e-29 Identities = 233/285 (81%), Gaps = 2/285 (0%) Strand = Plus / Minus Query: 275 ggcacgaccttggttgggttactgaaagaattttcatcctttacat-tgctggacgtgag 333 ||||| |||||||||||||| ||||| || ||||||||| | |||| ||||| | ||||| Sbjct: 884 ggcacaaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgag 826 Query: 334 aacagtagcgtttgaccccagcgcgttgatgctagcctggagcccggacacagagattgt 393 |||||| ||| |||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 825 aacagtggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgt 766 Query: 394 gaggctcacggtgtccgacccgaagttcacaatctttactctcaggaagttattcccgga 453 ||| |||| | || ||||||||||| | | ||||||||| |||||| | ||| |||| Sbjct: 765 cagggtcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcgga 706 Query: 454 atcctgccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaat 513 ||||||||||| || ||||| ||||| || ||||| ||||||||||| |||||||| | Sbjct: 705 gtcctgccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgt 646 Query: 514 tggatgaatcatggcaccactagattcgcggaaaaacttctgcat 558 |||||| | ||| ||||||||||| |||||||||| | ||||||| Sbjct: 645 tggatggaacatagcaccactagactcgcggaaaagcgtctgcat 601 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 160 tcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgaggagaaggagtg 219 ||||||||| || ||||||| ||||||||| || || || ||||||||| ||||||| | Sbjct: 999 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 940 Query: 220 ggcagcgagcgtgacctgcatctg 243 | ||| ||||||||||||||||| Sbjct: 939 aggagccagcgtgacctgcatctg 916
>dbj|AK065240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I08, full insert sequence Length = 2285 Score = 133 bits (67), Expect = 7e-28 Identities = 205/251 (81%) Strand = Plus / Minus Query: 290 gggttactgaaagaattttcatcctttacattgctggacgtgagaacagtagcgtttgac 349 |||||||| ||||| || |||||| | ||||| ||||| ||||||||||| || |||| Sbjct: 1997 gggttactaaaagagttctcatccatcacattactggatgtgagaacagtggcagttgat 1938 Query: 350 cccagcgcgttgatgctagcctggagcccggacacagagattgtgaggctcacggtgtcc 409 ||||| || || | | ||||| ||||| | ||||||| ||||||||||| | || Sbjct: 1937 cccagtgcattaacacgggcctgaagcccagttgcagagatcgtgaggctcactggatca 1878 Query: 410 gacccgaagttcacaatctttactctcaggaagttattcccggaatcctgccaggtgata 469 ||||| ||||| | |||||||||||| | |||| |||| | ||||||||||| || || Sbjct: 1877 gacccaaagtttataatctttactcttaagaagctattttcagaatcctgccaagtaatt 1818 Query: 470 gcagatgctgctagagaaccagagtagctggaactgattgtaattggatgaatcatggca 529 ||||||||||| ||||||||||||||||||||| ||||||||| |||||||| ||| ||| Sbjct: 1817 gcagatgctgccagagaaccagagtagctggaagtgattgtaactggatgaaacatagca 1758 Query: 530 ccactagattc 540 || |||||||| Sbjct: 1757 ccgctagattc 1747 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 149 gtgtcgctgcttcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgag 208 |||| |||||||||||||||||| || || | |||||| ||||||||||| ||||| ||| Sbjct: 2138 gtgttgctgcttcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgag 2079 Query: 209 gagaaggagtgggcagcgagcgtgacctgcatctg 243 ||||| ||||| | ||| |||||||| |||||||| Sbjct: 2078 gagaaagagtgaggagcaagcgtgacttgcatctg 2044
>dbj|AK061612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B06, full insert sequence Length = 926 Score = 133 bits (67), Expect = 7e-28 Identities = 205/251 (81%) Strand = Plus / Minus Query: 290 gggttactgaaagaattttcatcctttacattgctggacgtgagaacagtagcgtttgac 349 |||||||| ||||| || |||||| | ||||| ||||| ||||||||||| || |||| Sbjct: 483 gggttactaaaagagttctcatccatcacattactggatgtgagaacagtggcagttgat 424 Query: 350 cccagcgcgttgatgctagcctggagcccggacacagagattgtgaggctcacggtgtcc 409 ||||| || || | | ||||| ||||| | ||||||| ||||||||||| | || Sbjct: 423 cccagtgcattaacacgggcctgaagcccagttgcagagatcgtgaggctcactggatca 364 Query: 410 gacccgaagttcacaatctttactctcaggaagttattcccggaatcctgccaggtgata 469 ||||| ||||| | |||||||||||| | |||| |||| | ||||||||||| || || Sbjct: 363 gacccaaagtttataatctttactcttaagaagctattttcagaatcctgccaagtaatt 304 Query: 470 gcagatgctgctagagaaccagagtagctggaactgattgtaattggatgaatcatggca 529 ||||||||||| ||||||||||||||||||||| ||||||||| |||||||| ||| ||| Sbjct: 303 gcagatgctgccagagaaccagagtagctggaagtgattgtaactggatgaaacatagca 244 Query: 530 ccactagattc 540 || |||||||| Sbjct: 243 ccgctagattc 233 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 149 gtgtcgctgcttcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgag 208 |||| |||||||||||||||||| || || | |||||| ||||||||||| ||||| ||| Sbjct: 624 gtgttgctgcttcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgag 565 Query: 209 gagaaggagtgggcagcgagcgtgacctgcatctg 243 ||||| ||||| | ||| |||||||| |||||||| Sbjct: 564 gagaaagagtgaggagcaagcgtgacttgcatctg 530
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 123 bits (62), Expect = 7e-25 Identities = 107/122 (87%) Strand = Plus / Minus Query: 427 ctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgctagaga 486 ||||||||| | |||| |||| | ||||||||||| || || ||||||||||| ||||| Sbjct: 1364752 ctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagaga 1364693 Query: 487 accagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaa 546 |||||||||||||||| |||||||||||||||||| ||| ||||| |||||||| ||||| Sbjct: 1364692 accagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacggaa 1364633 Query: 547 aa 548 || Sbjct: 1364632 aa 1364631 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 155 ctgcttcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgaggagaag 214 ||||||||||||||||| || || | |||||| ||||||||||| ||||| |||||||| Sbjct: 1365219 ctgcttcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaa 1365160 Query: 215 gagtgggcagcgagcgtgacctgcatctg 243 ||||| | ||| |||||||| |||||||| Sbjct: 1365159 gagtgaggagcaagcgtgacttgcatctg 1365131 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 489 cagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaaa 547 ||||||||||||||||||| |||||||||||||||| ||||| || ||||| |||||| Sbjct: 1373223 cagagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacggaaa 1373165 Score = 58.0 bits (29), Expect = 3e-05 Identities = 98/121 (80%) Strand = Plus / Minus Query: 427 ctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgctagaga 486 |||||||||||| ||| ||| | | || || ||||||||||| ||||| || || | || Sbjct: 1402777 ctttactctcagaaagatatcctcagagtcttgccaggtgattgcagaagcagccaatga 1402718 Query: 487 accagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaa 546 | |||| || ||||||||||| ||||| |||||||||| | |||||| ||||| ||||| Sbjct: 1402717 atcagaatatctggaactgatcgtaatcggatgaatcacagaaccacttgattcacggaa 1402658 Query: 547 a 547 | Sbjct: 1402657 a 1402657 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Minus Query: 290 gggttactgaaagaattttcatcctttacattgctggacgtgagaacagtagcgtttgac 349 |||||||| ||||| || |||||| | ||||||||||| |||| |||||| || |||| Sbjct: 1364972 gggttactaaaagagttctcatccatcacattgctggatgtgataacagtggcagttgat 1364913 Query: 350 cccagcgcgtt 360 ||||| ||||| Sbjct: 1364912 cccagtgcgtt 1364902
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 123 bits (62), Expect = 7e-25 Identities = 107/122 (87%) Strand = Plus / Minus Query: 427 ctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgctagaga 486 ||||||||| | |||| |||| | ||||||||||| || || ||||||||||| ||||| Sbjct: 1364752 ctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagaga 1364693 Query: 487 accagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaa 546 |||||||||||||||| |||||||||||||||||| ||| ||||| |||||||| ||||| Sbjct: 1364692 accagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacggaa 1364633 Query: 547 aa 548 || Sbjct: 1364632 aa 1364631 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 155 ctgcttcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgaggagaag 214 ||||||||||||||||| || || | |||||| ||||||||||| ||||| |||||||| Sbjct: 1365219 ctgcttcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaa 1365160 Query: 215 gagtgggcagcgagcgtgacctgcatctg 243 ||||| | ||| |||||||| |||||||| Sbjct: 1365159 gagtgaggagcaagcgtgacttgcatctg 1365131 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 489 cagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaaa 547 ||||||||||||||||||| |||||||||||||||| ||||| || ||||| |||||| Sbjct: 1373223 cagagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacggaaa 1373165 Score = 58.0 bits (29), Expect = 3e-05 Identities = 98/121 (80%) Strand = Plus / Minus Query: 427 ctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgctagaga 486 |||||||||||| ||| ||| | | || || ||||||||||| ||||| || || | || Sbjct: 1402777 ctttactctcagaaagatatcctcagagtcttgccaggtgattgcagaagcagccaatga 1402718 Query: 487 accagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaa 546 | |||| || ||||||||||| ||||| |||||||||| | |||||| ||||| ||||| Sbjct: 1402717 atcagaatatctggaactgatcgtaatcggatgaatcacagaaccacttgattcacggaa 1402658 Query: 547 a 547 | Sbjct: 1402657 a 1402657 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Minus Query: 290 gggttactgaaagaattttcatcctttacattgctggacgtgagaacagtagcgtttgac 349 |||||||| ||||| || |||||| | ||||||||||| |||| |||||| || |||| Sbjct: 1364972 gggttactaaaagagttctcatccatcacattgctggatgtgataacagtggcagttgat 1364913 Query: 350 cccagcgcgtt 360 ||||| ||||| Sbjct: 1364912 cccagtgcgtt 1364902
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157453 Score = 123 bits (62), Expect = 7e-25 Identities = 107/122 (87%) Strand = Plus / Plus Query: 427 ctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgctagaga 486 ||||||||| | |||| |||| | ||||||||||| || || ||||||||||| ||||| Sbjct: 64417 ctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagaga 64476 Query: 487 accagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaa 546 |||||||||||||||| |||||||||||||||||| ||| ||||| |||||||| ||||| Sbjct: 64477 accagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacggaa 64536 Query: 547 aa 548 || Sbjct: 64537 aa 64538 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 155 ctgcttcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgaggagaag 214 ||||||||||||||||| || || | |||||| ||||||||||| ||||| |||||||| Sbjct: 63950 ctgcttcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaa 64009 Query: 215 gagtgggcagcgagcgtgacctgcatctg 243 ||||| | ||| |||||||| |||||||| Sbjct: 64010 gagtgaggagcaagcgtgacttgcatctg 64038 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 489 cagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaaa 547 ||||||||||||||||||| |||||||||||||||| ||||| || ||||| |||||| Sbjct: 55946 cagagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacggaaa 56004 Score = 58.0 bits (29), Expect = 3e-05 Identities = 98/121 (80%) Strand = Plus / Plus Query: 427 ctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgctagaga 486 |||||||||||| ||| ||| | | || || ||||||||||| ||||| || || | || Sbjct: 26392 ctttactctcagaaagatatcctcagagtcttgccaggtgattgcagaagcagccaatga 26451 Query: 487 accagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaa 546 | |||| || ||||||||||| ||||| |||||||||| | |||||| ||||| ||||| Sbjct: 26452 atcagaatatctggaactgatcgtaatcggatgaatcacagaaccacttgattcacggaa 26511 Query: 547 a 547 | Sbjct: 26512 a 26512 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 290 gggttactgaaagaattttcatcctttacattgctggacgtgagaacagtagcgtttgac 349 |||||||| ||||| || |||||| | ||||||||||| |||| |||||| || |||| Sbjct: 64197 gggttactaaaagagttctcatccatcacattgctggatgtgataacagtggcagttgat 64256 Query: 350 cccagcgcgtt 360 ||||| ||||| Sbjct: 64257 cccagtgcgtt 64267
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0035B18, complete sequence Length = 123425 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Minus Query: 427 ctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgctagaga 486 ||||||||| | |||| |||| | ||||||||||| || || ||||||||||| ||||| Sbjct: 79247 ctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagaga 79188 Query: 487 accagagtagctggaactgattgtaattggatgaatcatggcaccactagattc 540 |||||||||||||||| ||||||||| |||||||| ||| ||||| |||||||| Sbjct: 79187 accagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattc 79134 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 149 gtgtcgctgcttcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgag 208 |||| |||||||||||||||||| || || | |||||| ||||||||||| ||||| ||| Sbjct: 79719 gtgttgctgcttcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgag 79660 Query: 209 gagaaggagtgggcagcgagcgtgacctgcatctg 243 ||||| ||||| | ||| |||||||| |||||||| Sbjct: 79659 gagaaagagtgaggagcaagcgtgacttgcatctg 79625 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 460 ccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattggatg 519 ||||||||| |||||||| || || ||| | ||||||||||||| ||| ||||||||||| Sbjct: 110798 ccaggtgattgcagatgcagccagtgaatcggagtagctggaaccgatcgtaattggatg 110739 Query: 520 aatcatggcaccactagattcgcggaaa 547 ||||| | |||||| ||||| |||||| Sbjct: 110738 aatcacagaaccacttgattcacggaaa 110711 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 455 tcctgccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaatt 514 |||||||||||||| ||||||||||| || || || |||||||||| ||||| || | | Sbjct: 86601 tcctgccaggtgattgcagatgctgccagtaaatcaaagtagctggagctgatagtgact 86542 Query: 515 ggatgaatcatggcaccactagattcgcggaaa 547 |||||||||| | |||||| ||||| |||||| Sbjct: 86541 ggatgaatcacagaaccacttgattcacggaaa 86509 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Minus Query: 290 gggttactgaaagaattttcatcctttacattgctggacgtgagaacagt 339 |||||||| ||||| || |||||| | ||||| ||||| ||||||||||| Sbjct: 79466 gggttactaaaagagttctcatccatcacattactggatgtgagaacagt 79417
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Minus Query: 427 ctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgctagaga 486 ||||||||| | |||| |||| | ||||||||||| || || ||||||||||| ||||| Sbjct: 1460452 ctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagaga 1460393 Query: 487 accagagtagctggaactgattgtaattggatgaatcatggcaccactagattc 540 |||||||||||||||| ||||||||| |||||||| ||| ||||| |||||||| Sbjct: 1460392 accagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattc 1460339 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 149 gtgtcgctgcttcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgag 208 |||| |||||||||||||||||| || || | |||||| ||||||||||| ||||| ||| Sbjct: 1460924 gtgttgctgcttcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgag 1460865 Query: 209 gagaaggagtgggcagcgagcgtgacctgcatctg 243 ||||| ||||| | ||| |||||||| |||||||| Sbjct: 1460864 gagaaagagtgaggagcaagcgtgacttgcatctg 1460830 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 460 ccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattggatg 519 ||||||||| |||||||| || || ||| | ||||||||||||| ||| ||||||||||| Sbjct: 1492003 ccaggtgattgcagatgcagccagtgaatcggagtagctggaaccgatcgtaattggatg 1491944 Query: 520 aatcatggcaccactagattcgcggaaa 547 ||||| | |||||| ||||| |||||| Sbjct: 1491943 aatcacagaaccacttgattcacggaaa 1491916 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 455 tcctgccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaatt 514 |||||||||||||| ||||||||||| || || || |||||||||| ||||| || | | Sbjct: 1467806 tcctgccaggtgattgcagatgctgccagtaaatcaaagtagctggagctgatagtgact 1467747 Query: 515 ggatgaatcatggcaccactagattcgcggaaa 547 |||||||||| | |||||| ||||| |||||| Sbjct: 1467746 ggatgaatcacagaaccacttgattcacggaaa 1467714 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Minus Query: 290 gggttactgaaagaattttcatcctttacattgctggacgtgagaacagt 339 |||||||| ||||| || |||||| | ||||| ||||| ||||||||||| Sbjct: 1460671 gggttactaaaagagttctcatccatcacattactggatgtgagaacagt 1460622
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Minus Query: 427 ctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgctagaga 486 ||||||||| | |||| |||| | ||||||||||| || || ||||||||||| ||||| Sbjct: 1458173 ctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagaga 1458114 Query: 487 accagagtagctggaactgattgtaattggatgaatcatggcaccactagattc 540 |||||||||||||||| ||||||||| |||||||| ||| ||||| |||||||| Sbjct: 1458113 accagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattc 1458060 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 149 gtgtcgctgcttcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgag 208 |||| |||||||||||||||||| || || | |||||| ||||||||||| ||||| ||| Sbjct: 1458645 gtgttgctgcttcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgag 1458586 Query: 209 gagaaggagtgggcagcgagcgtgacctgcatctg 243 ||||| ||||| | ||| |||||||| |||||||| Sbjct: 1458585 gagaaagagtgaggagcaagcgtgacttgcatctg 1458551 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 460 ccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattggatg 519 ||||||||| |||||||| || || ||| | ||||||||||||| ||| ||||||||||| Sbjct: 1489724 ccaggtgattgcagatgcagccagtgaatcggagtagctggaaccgatcgtaattggatg 1489665 Query: 520 aatcatggcaccactagattcgcggaaa 547 ||||| | |||||| ||||| |||||| Sbjct: 1489664 aatcacagaaccacttgattcacggaaa 1489637 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 455 tcctgccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaatt 514 |||||||||||||| ||||||||||| || || || |||||||||| ||||| || | | Sbjct: 1465527 tcctgccaggtgattgcagatgctgccagtaaatcaaagtagctggagctgatagtgact 1465468 Query: 515 ggatgaatcatggcaccactagattcgcggaaa 547 |||||||||| | |||||| ||||| |||||| Sbjct: 1465467 ggatgaatcacagaaccacttgattcacggaaa 1465435 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Minus Query: 290 gggttactgaaagaattttcatcctttacattgctggacgtgagaacagt 339 |||||||| ||||| || |||||| | ||||| ||||| ||||||||||| Sbjct: 1458392 gggttactaaaagagttctcatccatcacattactggatgtgagaacagt 1458343
>gb|AF320324.1|AF320324 Hordeum vulgare arabinoxylan arabinofuranohydrolase isoenzyme AXAH-I mRNA, complete cds Length = 2068 Score = 83.8 bits (42), Expect = 6e-13 Identities = 189/238 (79%) Strand = Plus / Minus Query: 269 gtcacgggcacgaccttggttgggttactgaaagaattttcatcctttacattgctggac 328 ||||| ||||| |||||| |||||||| |||||| || || ||| ||||| || || Sbjct: 1898 gtcaccggcacaaccttgtttgggttagcgaaagagttctcgtccattacaccgccagat 1839 Query: 329 gtgagaacagtagcgtttgaccccagcgcgttgatgctagcctggagcccggacacagag 388 |||||||| || ||| | || || | ||| |||||||| |||||||||| | | | ||| Sbjct: 1838 gtgagaacggtcgcggtggatccgaacgcattgatgctgccctggagcccagtcgccgag 1779 Query: 389 attgtgaggctcacggtgtccgacccgaagttcacaatctttactctcaggaagttattc 448 || ||||||| ||||| || | |||||| ||||||||||| |||||||||||| | ||| Sbjct: 1778 atggtgaggcccacggcatctggcccgaaattcacaatcttcactctcaggaagctgttc 1719 Query: 449 ccggaatcctgccaggtgatagcagatgctgctagagaaccagagtagctggaactga 506 || ||| ||||| ||||| ||||||||||| || |||||||| |||| ||||||| Sbjct: 1718 tcgtcatcatgccacgtgatcgcagatgctgccagcaaaccagagcagcttgaactga 1661
>dbj|AK119404.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-E09, full insert sequence Length = 3254 Score = 79.8 bits (40), Expect = 9e-12 Identities = 112/136 (82%) Strand = Plus / Minus Query: 412 cccgaagttcacaatctttactctcaggaagttattcccggaatcctgccaggtgatagc 471 ||||||||| || ||||| |||||||| ||| ||||| | | || ||||||||||| || Sbjct: 1856 cccgaagtttactatcttcactctcagaaaggtattctcagcgtcttgccaggtgattgc 1797 Query: 472 agatgctgctagagaaccagagtagctggaactgattgtaattggatgaatcatggcacc 531 ||| || || | || ||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 1796 agaggcagccaataaatcagagtagctggaactgatcataattggatgaatcatagcacc 1737 Query: 532 actagattcgcggaaa 547 || ||||| |||||| Sbjct: 1736 gcttgattcacggaaa 1721 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Minus Query: 275 ggcacgaccttggttgggttactgaaagaattttcatcctttacattgctggacgtgaga 334 |||||||||||| |||| | ||| || |||||||||||| | |||||||| |||||| Sbjct: 1993 ggcacgaccttgtttggttcactaaatgaattttcatccagcaagttgctggatgtgaga 1934 Query: 335 acagt 339 ||||| Sbjct: 1933 acagt 1929
>dbj|AK103721.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138B08, full insert sequence Length = 2783 Score = 79.8 bits (40), Expect = 9e-12 Identities = 112/136 (82%) Strand = Plus / Minus Query: 412 cccgaagttcacaatctttactctcaggaagttattcccggaatcctgccaggtgatagc 471 ||||||||| || ||||| |||||||| ||| ||||| | | || ||||||||||| || Sbjct: 2047 cccgaagtttactatcttcactctcagaaaggtattctcagcgtcttgccaggtgattgc 1988 Query: 472 agatgctgctagagaaccagagtagctggaactgattgtaattggatgaatcatggcacc 531 ||| || || | || ||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 1987 agaggcagccaataaatcagagtagctggaactgatcataattggatgaatcatagcacc 1928 Query: 532 actagattcgcggaaa 547 || ||||| |||||| Sbjct: 1927 gcttgattcacggaaa 1912 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Minus Query: 275 ggcacgaccttggttgggttactgaaagaattttcatcctttacattgctggacgtgaga 334 |||||||||||| |||| | ||| || |||||||||||| | |||||||| |||||| Sbjct: 2184 ggcacgaccttgtttggttcactaaatgaattttcatccagcaagttgctggatgtgaga 2125 Query: 335 acagt 339 ||||| Sbjct: 2124 acagt 2120
>gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019B24, complete sequence Length = 162385 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 460 ccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattggatg 519 ||||||||| |||||||| || || ||| | ||||||||||||| ||| ||||||||||| Sbjct: 6539 ccaggtgattgcagatgcagccagtgaatcggagtagctggaaccgatcgtaattggatg 6480 Query: 520 aatcatggcaccactagattcgcggaaa 547 ||||| | |||||| ||||| |||||| Sbjct: 6479 aatcacagaaccacttgattcacggaaa 6452
>dbj|AK102526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096C04, full insert sequence Length = 2409 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 460 ccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattggatg 519 ||||||||| |||||||| || || ||| | ||||||||||||| ||| ||||||||||| Sbjct: 1886 ccaggtgattgcagatgcagccagtgaatcggagtagctggaaccgatcgtaattggatg 1827 Query: 520 aatcatggcaccactagattcgcggaaa 547 ||||| | |||||| ||||| |||||| Sbjct: 1826 aatcacagaaccacttgattcacggaaa 1799
>dbj|AK062199.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-G03, full insert sequence Length = 1396 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 460 ccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattggatg 519 ||||||||| |||||||| || || ||| | ||||||||||||| ||| ||||||||||| Sbjct: 873 ccaggtgattgcagatgcagccagtgaatcggagtagctggaaccgatcgtaattggatg 814 Query: 520 aatcatggcaccactagattcgcggaaa 547 ||||| | |||||| ||||| |||||| Sbjct: 813 aatcacagaaccacttgattcacggaaa 786
>dbj|AK099668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067L10, full insert sequence Length = 2367 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 455 tcctgccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaatt 514 |||||||||||||| ||||||||||| || || || |||||||||| ||||| || | | Sbjct: 1897 tcctgccaggtgattgcagatgctgccagtaaatcaaagtagctggagctgatagtgact 1838 Query: 515 ggatgaatcatggcaccactagattcgcggaaa 547 |||||||||| | |||||| ||||| |||||| Sbjct: 1837 ggatgaatcacagaaccacttgattcacggaaa 1805
>gb|AC097655.2| Homo sapiens BAC clone RP11-284H12 from 4, complete sequence Length = 77111 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 453 aatcctgccaggtgatagcaga 474 |||||||||||||||||||||| Sbjct: 13170 aatcctgccaggtgatagcaga 13149
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.49 Identities = 73/90 (81%) Strand = Plus / Minus Query: 458 tgccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattgga 517 ||||||||||| |||||||| || | | | ||||||||| |||||||| |||| ||| Sbjct: 15689042 tgccaggtgattgcagatgcagccaacgcatcagagtagccagaactgatcataatcgga 15688983 Query: 518 tgaatcatggcaccactagattcgcggaaa 547 ||||||| | |||||| ||||| |||||| Sbjct: 15688982 tgaatcacagaaccacttgattcacggaaa 15688953 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ttggttgggttactgaaaga 303 |||||||||||||||||||| Sbjct: 3063442 ttggttgggttactgaaaga 3063461
>dbj|AP005514.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0035A24 Length = 176446 Score = 44.1 bits (22), Expect = 0.49 Identities = 73/90 (81%) Strand = Plus / Minus Query: 458 tgccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattgga 517 ||||||||||| |||||||| || | | | ||||||||| |||||||| |||| ||| Sbjct: 97729 tgccaggtgattgcagatgcagccaacgcatcagagtagccagaactgatcataatcgga 97670 Query: 518 tgaatcatggcaccactagattcgcggaaa 547 ||||||| | |||||| ||||| |||||| Sbjct: 97669 tgaatcacagaaccacttgattcacggaaa 97640
>gb|AC004895.2| Homo sapiens PAC clone RP4-810E6 from 7, complete sequence Length = 152927 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 gagtgctttatcaagatataa 71 ||||||||||||||||||||| Sbjct: 148206 gagtgctttatcaagatataa 148186
>gb|AC157365.5| Mus musculus chromosome 8, clone RP23-113A2, complete sequence Length = 193347 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 462 aggtgatagcagatgctgctagaga 486 |||||| |||||||||||||||||| Sbjct: 898 aggtgacagcagatgctgctagaga 874
>gb|AC139357.27| Mus musculus chromosome 8, clone RP24-335I20, complete sequence Length = 183851 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 462 aggtgatagcagatgctgctagaga 486 |||||| |||||||||||||||||| Sbjct: 59923 aggtgacagcagatgctgctagaga 59899
>gb|AC132941.21| Mus musculus chromosome 18, clone RP23-163E22, complete sequence Length = 182073 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 acactgtacagtgagtgctttatc 62 |||||| ||||||||||||||||| Sbjct: 80588 acactgcacagtgagtgctttatc 80565
>gb|AC164619.5| Mus musculus BAC clone RP23-82L19 from chromosome 18, complete sequence Length = 216368 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ccaggtgatagcagatgctg 479 |||||||||||||||||||| Sbjct: 61123 ccaggtgatagcagatgctg 61142
>gb|AC133579.10| Mus musculus chromosome 7, clone RP23-222I22, complete sequence Length = 197206 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 ccaggtgatagcagatgctg 479 |||||||||||||||||||| Sbjct: 101214 ccaggtgatagcagatgctg 101195
>gb|AC119839.8| Mus musculus chromosome 1, clone RP24-170N13, complete sequence Length = 165405 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 ccaggtgatagcagatgctg 479 |||||||||||||||||||| Sbjct: 78783 ccaggtgatagcagatgctg 78764
>gb|AC161236.6| Mus musculus chromosome 3, clone RP23-403O4, complete sequence Length = 206652 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ccaggtgatagcagatgctg 479 |||||||||||||||||||| Sbjct: 62481 ccaggtgatagcagatgctg 62500
>gb|AC115300.4| Mus musculus BAC clone RP24-74P1 from chromosome 10, complete sequence Length = 199750 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 ccaggtgatagcagatgctg 479 |||||||||||||||||||| Sbjct: 175749 ccaggtgatagcagatgctg 175730
>gb|AC113974.9| Mus musculus chromosome 18, clone RP23-140D3, complete sequence Length = 270111 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ccaggtgatagcagatgctg 479 |||||||||||||||||||| Sbjct: 250073 ccaggtgatagcagatgctg 250092
>gb|AF110089.2| Sepioteuthis lessoniana strain C 16S ribosomal RNA gene, partial sequence Length = 422 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 275 acaatctttactctaaggaagtta 252
>gb|AY131035.1| Sepioteuthis lessoniana isolate ha29 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131034.1| Sepioteuthis lessoniana isolate ha28 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131033.1| Sepioteuthis lessoniana isolate ha27 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131032.1| Sepioteuthis lessoniana isolate ha26 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131031.1| Sepioteuthis lessoniana isolate ha25 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131030.1| Sepioteuthis lessoniana isolate ha24 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131029.1| Sepioteuthis lessoniana isolate ha23 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131028.1| Sepioteuthis lessoniana isolate ha22 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131027.1| Sepioteuthis lessoniana isolate ha21 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131026.1| Sepioteuthis lessoniana isolate ha20 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 476 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 289 acaatctttactctaaggaagtta 266
>gb|AY131025.1| Sepioteuthis lessoniana isolate ha19 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 476 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 289 acaatctttactctaaggaagtta 266
>gb|AY131024.1| Sepioteuthis lessoniana isolate ha18 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 476 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 289 acaatctttactctaaggaagtta 266
>gb|AY131023.1| Sepioteuthis lessoniana isolate ha17 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 476 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 289 acaatctttactctaaggaagtta 266
>gb|AY131022.1| Sepioteuthis lessoniana isolate ha16 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 476 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 289 acaatctttactctaaggaagtta 266
>gb|AY131021.1| Sepioteuthis lessoniana isolate ha15 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131020.1| Sepioteuthis lessoniana isolate ha14 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131019.1| Sepioteuthis lessoniana isolate ha13 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131018.1| Sepioteuthis lessoniana isolate ha12 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131017.1| Sepioteuthis lessoniana isolate ha11 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131016.1| Sepioteuthis lessoniana isolate ha10 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131015.1| Sepioteuthis lessoniana isolate ha9 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131014.1| Sepioteuthis lessoniana isolate ha8 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131013.1| Sepioteuthis lessoniana isolate ha7 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131012.1| Sepioteuthis lessoniana isolate ha6 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131011.1| Sepioteuthis lessoniana isolate ha5 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131010.1| Sepioteuthis lessoniana isolate ha4 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131009.1| Sepioteuthis lessoniana isolate ha3 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131008.1| Sepioteuthis lessoniana isolate ha2 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131007.1| Sepioteuthis lessoniana isolate ha1 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AC164650.3| Mus musculus BAC clone RP23-47A4 from chromosome 1, complete sequence Length = 200598 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 caggtgatagcagatgctgc 480 |||||||||||||||||||| Sbjct: 123844 caggtgatagcagatgctgc 123825
>emb|AL590522.7| Mouse DNA sequence from clone RP23-117C5 on chromosome 13 Contains the Prlpc2, Prlpe and Prlpf genes for prolactin-like proteins C2 (1600019F10RIK, Prlpc beta), E (Prlpg) and F (Plp-f), and genes 1600032B14RIK, 1600017L04RIK (3830403L08RIK) and 1600014J19RIK for novel proteins similar to prolactin, complete sequence Length = 211776 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ccaggtgatagcagatgctg 479 |||||||||||||||||||| Sbjct: 52366 ccaggtgatagcagatgctg 52385
>emb|CR450728.8| Zebrafish DNA sequence from clone DKEY-204K18 in linkage group 8, complete sequence Length = 193025 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ctcctccatttccatatcac 108 |||||||||||||||||||| Sbjct: 141619 ctcctccatttccatatcac 141638
>gb|AC109806.12| Mus musculus chromosome 1, clone RP23-310C14, complete sequence Length = 198227 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 caggtgatagcagatgctgc 480 |||||||||||||||||||| Sbjct: 134013 caggtgatagcagatgctgc 134032
>dbj|AB240154.1| Sepioteuthis lessoniana mitochondrial DNA, complete genome Length = 16631 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 12794 acaatctttactctaaggaagtta 12817
>gb|AC149217.4| Mus musculus BAC clone RP24-147O12 from chromosome 7, complete sequence Length = 205466 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ccaggtgatagcagatgctg 479 |||||||||||||||||||| Sbjct: 24753 ccaggtgatagcagatgctg 24772
>gb|AC104697.2| Homo sapiens BAC clone RP11-454B3 from 2, complete sequence Length = 159797 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 aatcctgccaggtgatagca 472 |||||||||||||||||||| Sbjct: 104260 aatcctgccaggtgatagca 104279
>gb|AC133942.3| Mus musculus BAC clone RP23-472J11 from chromosome 7, complete sequence Length = 186014 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 caggtgatagcagatgctgc 480 |||||||||||||||||||| Sbjct: 66327 caggtgatagcagatgctgc 66346
>dbj|AP005896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0032C09 Length = 127263 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ttggttgggttactgaaaga 303 |||||||||||||||||||| Sbjct: 109553 ttggttgggttactgaaaga 109572
>dbj|BS000127.1| Pan troglodytes chromosome 22 clone:PTB-099K02, map 22, complete sequences Length = 191424 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tttcttacactgtacagtga 52 |||||||||||||||||||| Sbjct: 164688 tttcttacactgtacagtga 164707
>dbj|AP001731.1| Homo sapiens genomic DNA, chromosome 21q, section 75/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tttcttacactgtacagtga 52 |||||||||||||||||||| Sbjct: 150153 tttcttacactgtacagtga 150172
>dbj|AP003083.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-179B7, complete sequence Length = 161488 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tttcatcctttacattgctg 325 |||||||||||||||||||| Sbjct: 142221 tttcatcctttacattgctg 142202
>emb|AJ001649.1|SLAJ1649 Sepioteuthis lessoniana 16S rRNA gene Length = 505 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 330 acaatctttactctaaggaagtta 307
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 acgtgtcactaacgccgtgt 152 |||||||||||||||||||| Sbjct: 3140757 acgtgtcactaacgccgtgt 3140738
>gb|AC151997.2| Mus musculus BAC clone RP23-138O21 from 8, complete sequence Length = 201556 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ccaggtgatagcagatgctg 479 |||||||||||||||||||| Sbjct: 82668 ccaggtgatagcagatgctg 82687
>gb|AC124759.4| Mus musculus BAC clone RP23-132N7 from 1, complete sequence Length = 200104 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 caggtgatagcagatgctgc 480 |||||||||||||||||||| Sbjct: 78849 caggtgatagcagatgctgc 78830
>gb|AC110375.4| Mus musculus BAC clone RP23-409L20 from 18, complete sequence Length = 191505 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ccaggtgatagcagatgctg 479 |||||||||||||||||||| Sbjct: 119610 ccaggtgatagcagatgctg 119629
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 acgtgtcactaacgccgtgt 152 |||||||||||||||||||| Sbjct: 3069488 acgtgtcactaacgccgtgt 3069469
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 acgtgtcactaacgccgtgt 152 |||||||||||||||||||| Sbjct: 2227282 acgtgtcactaacgccgtgt 2227263
>gb|L02053.1|OMMGSHTR1 Ommastrephes sloani glutathione transferase gene, exon 1 Length = 3800 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 agctggaactgattgtaatt 514 |||||||||||||||||||| Sbjct: 1839 agctggaactgattgtaatt 1858
>emb|X79571.1|MISLLRR S.lessoniana mitochondria lrRNA gene Length = 474 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 acaatctttactctcaggaagtta 445 |||||||||||||| ||||||||| Sbjct: 298 acaatctttactctaaggaagtta 275
>emb|AL845283.4| Mouse DNA sequence from clone RP23-151F21 on chromosome 2, complete sequence Length = 178403 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 caggtgatagcagatgctgc 480 |||||||||||||||||||| Sbjct: 74487 caggtgatagcagatgctgc 74506
>dbj|AP000162.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone D47-S479, segment 14/16, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tttcttacactgtacagtga 52 |||||||||||||||||||| Sbjct: 36570 tttcttacactgtacagtga 36589
>dbj|AP000020.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 11/13 Length = 100000 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tttcttacactgtacagtga 52 |||||||||||||||||||| Sbjct: 70966 tttcttacactgtacagtga 70985
>dbj|AP001438.1| Homo sapiens genomic DNA, chromosome 21q22.2, clone:T695, LB7T-ERG region, complete sequence Length = 17829 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tttcttacactgtacagtga 52 |||||||||||||||||||| Sbjct: 4110 tttcttacactgtacagtga 4129
>dbj|AP001434.1| Homo sapiens genomic DNA, chromosome 21q22.2, clone:T2079, LB7T-ERG region, complete sequence Length = 74817 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tttcttacactgtacagtga 52 |||||||||||||||||||| Sbjct: 71621 tttcttacactgtacagtga 71640 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,501,540 Number of Sequences: 3902068 Number of extensions: 4501540 Number of successful extensions: 135722 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 135303 Number of HSP's gapped (non-prelim): 417 length of query: 561 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 538 effective length of database: 17,143,297,704 effective search space: 9223094164752 effective search space used: 9223094164752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)