Clone Name | rbasd24j09 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009605.1| Triticum aestivum clone wre1n.pk0086.d1:fis, full insert mRNA sequence Length = 832 Score = 452 bits (228), Expect = e-124 Identities = 252/260 (96%) Strand = Plus / Minus Query: 211 gatcagcccatggcgtacttctgggtccaggccctcgcggtgtcctcatagcgggctctc 270 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 539 gatcagcccatggcgtacttctgggtccaggccctcgcggtctcctcgtagcgggctctc 480 Query: 271 tggttcttgtagagctgcgcgatctccgggacaaggggatcgtcggggttggggtctgta 330 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 479 tggttcttgtagagctgcgcgatctccgggacaagggggtcgtcggggttggggtcggtg 420 Query: 331 agcagggagctgatggagagtaggaccttggatatggtcagcgccgggctccactgctcc 390 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 419 agcagggagctgatggagagtaggaccttggatatggttagcgccgggctccactgctcc 360 Query: 391 ttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtggtacacctttgtt 450 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 359 ttgaggatgtccaggcagatgctgccgttggagttgatgttcgggtgatacacctttgtt 300 Query: 451 tggaaattcacttttggagg 470 |||||||||||||||||||| Sbjct: 299 tggaaattcacttttggagg 280 Score = 149 bits (75), Expect = 1e-32 Identities = 122/137 (89%), Gaps = 8/137 (5%) Strand = Plus / Minus Query: 1 aattcttgaaaatgttctgtcttgatacatacaggtcttcagacttcagggacggggcat 60 ||||||||||| |||| ||||||||||||||||||||||||| || | |||| Sbjct: 772 aattcttgaaa-tgttttgtcttgatacatacaggtcttcag-------gggcagggcgg 721 Query: 61 acacccaaagtttcgaaacagaaatgcaaacattacccagttttcacaactgtacacaag 120 ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 720 acacccaaagtttggaaacagaaatgcaaacattacccagttttgacaactgtacacaag 661 Query: 121 taaaaactggttcagag 137 ||||||||||||||||| Sbjct: 660 taaaaactggttcagag 644 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 148 ggcgggaaaccggcgcggcacaaaagttctcttac 182 ||||||||||||||||| |||| |||||||||||| Sbjct: 600 ggcgggaaaccggcgcgacacagaagttctcttac 566
>dbj|AK065902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047C20, full insert sequence Length = 896 Score = 258 bits (130), Expect = 1e-65 Identities = 223/254 (87%) Strand = Plus / Minus Query: 217 cccatggcgtacttctgggtccaggccctcgcggtgtcctcatagcgggctctctggttc 276 ||||| ||||| |||||||||||||||||||| || |||||||| || | |||||| || Sbjct: 605 cccattgcgtatttctgggtccaggccctcgccgtctcctcataacgtggcctctggctc 546 Query: 277 ttgtagagctgcgcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagg 336 ||||||| || |||||||| |||||||||||||| || ||||||||||| || || || Sbjct: 545 ttgtagacgtgggcgatctctgggacaaggggatcatctgggttggggtcagtgagaaga 486 Query: 337 gagctgatggagagtaggaccttggatatggtcagcgccgggctccactgctccttgagg 396 ||||||||||| || |||||||| |||||||||| || ||||||||||||||||||||| Sbjct: 485 gagctgatggataggaggacctttgatatggtcaatgctgggctccactgctccttgagg 426 Query: 397 atgtccaggcagatgctgccgttggagttgatgtttgggtggtacacctttgtttggaaa 456 ||||| ||||| ||||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 425 atgtcaaggcaaatgcttccattggagttgatgtttgggtgatacacctttgtttggaag 366 Query: 457 ttcacttttggagg 470 |||||||||||||| Sbjct: 365 ttcacttttggagg 352
>dbj|AK059627.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H11, full insert sequence Length = 899 Score = 258 bits (130), Expect = 1e-65 Identities = 223/254 (87%) Strand = Plus / Minus Query: 217 cccatggcgtacttctgggtccaggccctcgcggtgtcctcatagcgggctctctggttc 276 ||||| ||||| |||||||||||||||||||| || |||||||| || | |||||| || Sbjct: 597 cccattgcgtatttctgggtccaggccctcgccgtctcctcataacgtggcctctggctc 538 Query: 277 ttgtagagctgcgcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagg 336 ||||||| || |||||||| |||||||||||||| || ||||||||||| || || || Sbjct: 537 ttgtagacgtgggcgatctctgggacaaggggatcatctgggttggggtcagtgagaaga 478 Query: 337 gagctgatggagagtaggaccttggatatggtcagcgccgggctccactgctccttgagg 396 ||||||||||| || |||||||| |||||||||| || ||||||||||||||||||||| Sbjct: 477 gagctgatggataggaggacctttgatatggtcaatgctgggctccactgctccttgagg 418 Query: 397 atgtccaggcagatgctgccgttggagttgatgtttgggtggtacacctttgtttggaaa 456 ||||| ||||| ||||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 417 atgtcaaggcaaatgcttccattggagttgatgtttgggtgatacacctttgtttggaag 358 Query: 457 ttcacttttggagg 470 |||||||||||||| Sbjct: 357 ttcacttttggagg 344
>gb|AY105836.1| Zea mays PCO130472 mRNA sequence Length = 915 Score = 220 bits (111), Expect = 3e-54 Identities = 222/259 (85%) Strand = Plus / Minus Query: 212 atcagcccatggcgtacttctgggtccaggccctcgcggtgtcctcatagcgggctctct 271 |||||||||| |||||||||||||||||||||| || || ||||| ||||| |||| Sbjct: 660 atcagcccattgcgtacttctgggtccaggcccgtgcagtttcctcgtagcgctgcctct 601 Query: 272 ggttcttgtagagctgcgcgatctccgggacaaggggatcgtcggggttggggtctgtaa 331 |||| ||||| | || |||||||| ||||||||||| ||||| ||||||||||| || | Sbjct: 600 ggtttttgtacatgtgggcgatctcagggacaagggggtcgtccgggttggggtcggtga 541 Query: 332 gcagggagctgatggagagtaggaccttggatatggtcagcgccgggctccactgctcct 391 | || |||||||||||||| |||||||| ||||||||||| || |||||||| ||||||| Sbjct: 540 ggagcgagctgatggagaggaggacctttgatatggtcagtgcagggctccattgctcct 481 Query: 392 tgaggatgtccaggcagatgctgccgttggagttgatgtttgggtggtacacctttgttt 451 ||||||| || ||||| ||||| || || ||||||||||||||||| || || ||||||| Sbjct: 480 tgaggatatcaaggcaaatgctcccattagagttgatgtttgggtgataaacttttgttt 421 Query: 452 ggaaattcacttttggagg 470 |||| |||||||||||||| Sbjct: 420 ggaagttcacttttggagg 402
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 216 bits (109), Expect = 5e-53 Identities = 199/229 (86%) Strand = Plus / Minus Query: 217 cccatggcgtacttctgggtccaggccctcgcggtgtcctcatagcgggctctctggttc 276 ||||| ||||| |||||||||||||||||||| || |||||||| || | |||||| || Sbjct: 6896423 cccattgcgtatttctgggtccaggccctcgccgtctcctcataacgtggcctctggctc 6896364 Query: 277 ttgtagagctgcgcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagg 336 ||||||| || |||||||| |||||||||||||| || ||||||||||| || || || Sbjct: 6896363 ttgtagacgtgggcgatctctgggacaaggggatcatctgggttggggtcagtgagaaga 6896304 Query: 337 gagctgatggagagtaggaccttggatatggtcagcgccgggctccactgctccttgagg 396 ||||||||||| || |||||||| |||||||||| || ||||||||||||||||||||| Sbjct: 6896303 gagctgatggataggaggacctttgatatggtcaatgctgggctccactgctccttgagg 6896244 Query: 397 atgtccaggcagatgctgccgttggagttgatgtttgggtggtacacct 445 ||||| ||||| ||||| || |||||||||||||||||||| ||||||| Sbjct: 6896243 atgtcaaggcaaatgcttccattggagttgatgtttgggtgatacacct 6896195 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 441 cacctttgtttggaaattcacttttggagg 470 ||||||||||||||| |||||||||||||| Sbjct: 6895117 cacctttgtttggaagttcacttttggagg 6895088
>dbj|AP006156.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1043F11 Length = 167137 Score = 216 bits (109), Expect = 5e-53 Identities = 199/229 (86%) Strand = Plus / Minus Query: 217 cccatggcgtacttctgggtccaggccctcgcggtgtcctcatagcgggctctctggttc 276 ||||| ||||| |||||||||||||||||||| || |||||||| || | |||||| || Sbjct: 124318 cccattgcgtatttctgggtccaggccctcgccgtctcctcataacgtggcctctggctc 124259 Query: 277 ttgtagagctgcgcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagg 336 ||||||| || |||||||| |||||||||||||| || ||||||||||| || || || Sbjct: 124258 ttgtagacgtgggcgatctctgggacaaggggatcatctgggttggggtcagtgagaaga 124199 Query: 337 gagctgatggagagtaggaccttggatatggtcagcgccgggctccactgctccttgagg 396 ||||||||||| || |||||||| |||||||||| || ||||||||||||||||||||| Sbjct: 124198 gagctgatggataggaggacctttgatatggtcaatgctgggctccactgctccttgagg 124139 Query: 397 atgtccaggcagatgctgccgttggagttgatgtttgggtggtacacct 445 ||||| ||||| ||||| || |||||||||||||||||||| ||||||| Sbjct: 124138 atgtcaaggcaaatgcttccattggagttgatgtttgggtgatacacct 124090 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 441 cacctttgtttggaaattcacttttggagg 470 ||||||||||||||| |||||||||||||| Sbjct: 123012 cacctttgtttggaagttcacttttggagg 122983
>gb|AY109411.1| Zea mays CL25406_3 mRNA sequence Length = 1037 Score = 145 bits (73), Expect = 1e-31 Identities = 139/161 (86%) Strand = Plus / Plus Query: 286 tgcgcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatg 345 ||||| ||||| ||||| || |||||||||||||| || || || |||||||||| |||| Sbjct: 159 tgcgctatctcggggaccagaggatcgtcggggttcggatcggtcagcagggagcagatg 218 Query: 346 gagagtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccagg 405 || || || |||||||| ||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct: 219 gacagcagcaccttggagatggttagcgccgggctccactggtccttcaggatgtcaagg 278 Query: 406 cagatgctgccgttggagttgatgtttgggtggtacacctt 446 |||||||| |||||| |||||||||||| ||| ||||||| Sbjct: 279 cagatgctcccgttgctgttgatgtttggatggaacacctt 319 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 219 catggcgtacttctgggtccaggccctcgcggtgt 253 |||||||||| |||||||||||| ||||||||||| Sbjct: 92 catggcgtacctctgggtccaggtcctcgcggtgt 126
>gb|AY736121.1| Triticum aestivum ubiquitin-conjugating enzyme mRNA, complete cds Length = 460 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 289 gcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggag 348 |||||||| || || || ||||| |||||||| ||||| || |||| || | ||| || Sbjct: 381 gcgatctcgggcaccagaggatcatcggggttcgggtccgtcagcaacgaacagattgac 322 Query: 349 agtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcag 408 || |||||||| |||||||||| |||||||||||||| |||||||| ||||| ||||| Sbjct: 321 agcaggacctttgatatggtcaaagccgggctccactgttccttgagaatgtcaaggcaa 262 Query: 409 atgctgccgttggagttgatgtttgggtggtacacctt 446 |||||||||||| |||||||||||||||| ||||||| Sbjct: 261 atgctgccgttgctgttgatgtttgggtggaacacctt 224 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 215 agcccatggcgtacttctgggtccagg 241 ||||||||||||||||||| ||||||| Sbjct: 455 agcccatggcgtacttctgtgtccagg 429
>gb|AY104017.1| Zea mays PCO119482 mRNA sequence Length = 885 Score = 111 bits (56), Expect = 2e-21 Identities = 101/116 (87%) Strand = Plus / Minus Query: 292 atctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggagagt 351 |||||||||||||| || ||||| ||||||||||| || |||||||||| ||||||||| Sbjct: 505 atctccgggacaagagggtcgtccgggttggggtcggtcagcagggagcagatggagagc 446 Query: 352 aggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggca 407 |||||||| || || ||||| || |||||||||||||| ||||| ||||| ||||| Sbjct: 445 aggaccttagaaattgtcagagcagggctccactgctctttgagaatgtcaaggca 390 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 213 tcagcccatggcgtacttctgggtccag 240 ||||||||| ||||||||||| |||||| Sbjct: 584 tcagcccatcgcgtacttctgcgtccag 557
>ref|XM_463908.1| Oryza sativa (japonica cultivar-group), mRNA Length = 815 Score = 107 bits (54), Expect = 3e-20 Identities = 132/158 (83%) Strand = Plus / Minus Query: 289 gcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggag 348 ||||||||||| || || |||||||| ||||| ||||| || ||||| |||| ||| || Sbjct: 458 gcgatctccggcaccagcggatcgtccgggttcgggtccgtcagcagcgagcagatcgac 399 Query: 349 agtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcag 408 || || |||||||| ||||| || || ||||||||||| |||||||||||||| |||||| Sbjct: 398 agaagaaccttggagatggtgagagctgggctccactggtccttgaggatgtcaaggcag 339 Query: 409 atgctgccgttggagttgatgtttgggtggtacacctt 446 ||| |||| ||| ||| |||||||| ||| ||||||| Sbjct: 338 atgttgccattgctgtttatgtttggatggaacacctt 301 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 215 agcccatggcgtacttctgggtccag 240 ||||||||||||||||||| |||||| Sbjct: 532 agcccatggcgtacttctgcgtccag 507
>dbj|AK120237.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043N18, full insert sequence Length = 815 Score = 107 bits (54), Expect = 3e-20 Identities = 132/158 (83%) Strand = Plus / Minus Query: 289 gcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggag 348 ||||||||||| || || |||||||| ||||| ||||| || ||||| |||| ||| || Sbjct: 458 gcgatctccggcaccagcggatcgtccgggttcgggtccgtcagcagcgagcagatcgac 399 Query: 349 agtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcag 408 || || |||||||| ||||| || || ||||||||||| |||||||||||||| |||||| Sbjct: 398 agaagaaccttggagatggtgagagctgggctccactggtccttgaggatgtcaaggcag 339 Query: 409 atgctgccgttggagttgatgtttgggtggtacacctt 446 ||| |||| ||| ||| |||||||| ||| ||||||| Sbjct: 338 atgttgccattgctgtttatgtttggatggaacacctt 301 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 215 agcccatggcgtacttctgggtccag 240 ||||||||||||||||||| |||||| Sbjct: 532 agcccatggcgtacttctgcgtccag 507
>gb|BT016331.1| Zea mays clone Contig164 mRNA sequence Length = 860 Score = 103 bits (52), Expect = 5e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 292 atctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggagagt 351 |||||||||||||| || ||||| ||||||||||| || |||||||||| ||||||||| Sbjct: 468 atctccgggacaagagggtcgtccgggttggggtcggtcagcagggagcagatggagagc 409 Query: 352 aggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggca 407 |||||||| || || |||| || |||||||||||||| ||||| ||||| ||||| Sbjct: 408 aggaccttagaaattgtcaaagcagggctccactgctctttgagaatgtcaaggca 353 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 213 tcagcccatggcgtacttctgggtccag 240 ||||||||| ||||||||||| |||||| Sbjct: 547 tcagcccatcgcgtacttctgcgtccag 520
>gb|AF034946.1|AF034946 Zea mays ubiquitin conjugating enzyme (UBC) mRNA, complete cds Length = 781 Score = 103 bits (52), Expect = 5e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 292 atctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggagagt 351 |||||||||||||| || ||||| ||||||||||| || |||||||||| ||||||||| Sbjct: 408 atctccgggacaagagggtcgtccgggttggggtcggtcagcagggagcagatggagagc 349 Query: 352 aggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggca 407 |||||||| || || |||| || |||||||||||||| ||||| ||||| ||||| Sbjct: 348 aggaccttagaaattgtcaaagcagggctccactgctctttgagaatgtcaaggca 293 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 213 tcagcccatggcgtacttctgggtccag 240 ||||||||| ||||||||||| |||||| Sbjct: 487 tcagcccatcgcgtacttctgcgtccag 460
>ref|XM_954840.1| Neurospora crassa OR74A hypothetical protein ( (XM_016084) hypothetical protein XP_016084 [Homo sapiens] ) (NCU02289.1) partial mRNA Length = 444 Score = 101 bits (51), Expect = 2e-18 Identities = 129/155 (83%) Strand = Plus / Minus Query: 286 tgcgcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatg 345 ||||| ||||| || ||||| || ||||| |||||||| || || | || |||| |||| Sbjct: 374 tgcgcaatctcgggcacaagcgggtcgtcagggttgggatccgtcaacatcgagcagatg 315 Query: 346 gagagtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccagg 405 ||||| || |||||||| || |||| |||||| |||||||| ||| | || ||||| ||| Sbjct: 314 gagagcagaaccttggagatcgtcaacgccggactccactgatccctcagaatgtcgagg 255 Query: 406 cagatgctgccgttggagttgatgtttgggtggta 440 |||||||||||||| ||||||||||| |||||||| Sbjct: 254 cagatgctgccgttcgagttgatgttggggtggta 220
>ref|XM_331064.1| Neurospora crassa OR74A hypothetical protein ( (XM_016084) hypothetical protein XP_016084 [Homo sapiens] ) (NCU02289.1) partial mRNA Length = 444 Score = 101 bits (51), Expect = 2e-18 Identities = 129/155 (83%) Strand = Plus / Minus Query: 286 tgcgcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatg 345 ||||| ||||| || ||||| || ||||| |||||||| || || | || |||| |||| Sbjct: 374 tgcgcaatctcgggcacaagcgggtcgtcagggttgggatccgtcaacatcgagcagatg 315 Query: 346 gagagtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccagg 405 ||||| || |||||||| || |||| |||||| |||||||| ||| | || ||||| ||| Sbjct: 314 gagagcagaaccttggagatcgtcaacgccggactccactgatccctcagaatgtcgagg 255 Query: 406 cagatgctgccgttggagttgatgtttgggtggta 440 |||||||||||||| ||||||||||| |||||||| Sbjct: 254 cagatgctgccgttcgagttgatgttggggtggta 220
>gb|AF030296.1|AF030296 Glomerella cingulata ubiquitin conjugating enzyme UBC1 (UBC1) mRNA, complete cds Length = 961 Score = 99.6 bits (50), Expect = 8e-18 Identities = 137/166 (82%) Strand = Plus / Minus Query: 275 tcttgtagagctgcgcgatctccgggacaaggggatcgtcggggttggggtctgtaagca 334 ||||||||| || |||||||| ||||| || || ||||||||||||||||| || |||| Sbjct: 590 tcttgtagacgtgtgcgatctcggggacgagcggttcgtcggggttggggtccgtcagca 531 Query: 335 gggagctgatggagagtaggaccttggatatggtcagcgccgggctccactgctccttga 394 |||| ||||||||| |||||||| || ||||||| |||||| ||| || || | Sbjct: 530 tcgagcagatggagagcaggaccttagagatggtcaacgccggagaccattggtcacgca 471 Query: 395 ggatgtccaggcagatgctgccgttggagttgatgtttgggtggta 440 |||| || | ||||||||||||||||||||||||||| |||||||| Sbjct: 470 ggatatctaagcagatgctgccgttggagttgatgttggggtggta 425
>gb|AF461687.1| Pinus pinaster putative ubiquitin mRNA, partial cds Length = 424 Score = 87.7 bits (44), Expect = 3e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 352 aggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatg 411 |||||||| || || ||||| || || |||||||| ||||||||||| |||| |||||| Sbjct: 285 aggaccttagagattgtcagtgcgggactccactgttccttgaggatatccaaacagatg 226 Query: 412 ctgccgttggagttgatgtttgggtggtacacctttgtttggaaattcacttttgg 467 || || ||||||||||||||||| || || ||||| ||||||||||| || ||||| Sbjct: 225 ctaccattggagttgatgtttggatgataaaccttggtttggaaattaacctttgg 170
>emb|AJ010592.2|GTAJ10592 Guillardia theta DNA for complete sequence of nucleomorph chromosome 2 Length = 180915 Score = 81.8 bits (41), Expect = 2e-12 Identities = 131/161 (81%) Strand = Plus / Plus Query: 289 gcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggag 348 ||||| || ||||| || || ||||| || |||||||| || || ||||||||||| ||| Sbjct: 168282 gcgatttcggggaccagtgggtcgtccggattggggtcggtgaggagggagctgatcgag 168341 Query: 349 agtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcag 408 || || || ||||| | ||||| || ||||||||||| || |||||||||||||||| Sbjct: 168342 agcagcactttggagaccgtcagggctgggctccactgatcgcggaggatgtccaggcag 168401 Query: 409 atgctgccgttggagttgatgtttgggtggtacacctttgt 449 ||||| || || |||||||| || |||||||| | |||||| Sbjct: 168402 atgcttccatttgagttgatattagggtggtagatctttgt 168442 Score = 81.8 bits (41), Expect = 2e-12 Identities = 131/161 (81%) Strand = Plus / Minus Query: 289 gcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggag 348 ||||| || ||||| || || ||||| || |||||||| || || ||||||||||| ||| Sbjct: 12634 gcgatttcggggaccagtgggtcgtccggattggggtcggtgaggagggagctgatcgag 12575 Query: 349 agtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcag 408 || || || ||||| | ||||| || ||||||||||| || |||||||||||||||| Sbjct: 12574 agcagcactttggagaccgtcagggctgggctccactgatcgcggaggatgtccaggcag 12515 Query: 409 atgctgccgttggagttgatgtttgggtggtacacctttgt 449 ||||| || || |||||||| || |||||||| | |||||| Sbjct: 12514 atgcttccatttgagttgatattagggtggtagatctttgt 12474
>gb|AF083031.2|AF083031 Guillardia theta nucleomorph chromosome 3, complete sequence Length = 174133 Score = 81.8 bits (41), Expect = 2e-12 Identities = 131/161 (81%) Strand = Plus / Plus Query: 289 gcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggag 348 ||||| || ||||| || || ||||| || |||||||| || || ||||||||||| ||| Sbjct: 161500 gcgatttcggggaccagtgggtcgtccggattggggtcggtgaggagggagctgatcgag 161559 Query: 349 agtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcag 408 || || || ||||| | ||||| || ||||||||||| || |||||||||||||||| Sbjct: 161560 agcagcactttggagaccgtcagggctgggctccactgatcgcggaggatgtccaggcag 161619 Query: 409 atgctgccgttggagttgatgtttgggtggtacacctttgt 449 ||||| || || |||||||| || |||||||| | |||||| Sbjct: 161620 atgcttccatttgagttgatattagggtggtagatctttgt 161660 Score = 81.8 bits (41), Expect = 2e-12 Identities = 131/161 (81%) Strand = Plus / Minus Query: 289 gcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggag 348 ||||| || ||||| || || ||||| || |||||||| || || ||||||||||| ||| Sbjct: 12634 gcgatttcggggaccagtgggtcgtccggattggggtcggtgaggagggagctgatcgag 12575 Query: 349 agtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcag 408 || || || ||||| | ||||| || ||||||||||| || |||||||||||||||| Sbjct: 12574 agcagcactttggagaccgtcagggctgggctccactgatcgcggaggatgtccaggcag 12515 Query: 409 atgctgccgttggagttgatgtttgggtggtacacctttgt 449 ||||| || || |||||||| || |||||||| | |||||| Sbjct: 12514 atgcttccatttgagttgatattagggtggtagatctttgt 12474
>gb|AF165818.4|AF165818 Guillardia theta nucleomorph chromosome 1, complete sequence Length = 196216 Score = 81.8 bits (41), Expect = 2e-12 Identities = 131/161 (81%) Strand = Plus / Minus Query: 289 gcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggag 348 ||||| || ||||| || || ||||| || |||||||| || || ||||||||||| ||| Sbjct: 12634 gcgatttcggggaccagtgggtcgtccggattggggtcggtgaggagggagctgatcgag 12575 Query: 349 agtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcag 408 || || || ||||| | ||||| || ||||||||||| || |||||||||||||||| Sbjct: 12574 agcagcactttggagaccgtcagggctgggctccactgatcgcggaggatgtccaggcag 12515 Query: 409 atgctgccgttggagttgatgtttgggtggtacacctttgt 449 ||||| || || |||||||| || |||||||| | |||||| Sbjct: 12514 atgcttccatttgagttgatattagggtggtagatctttgt 12474
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 79.8 bits (40), Expect = 7e-12 Identities = 79/92 (85%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| || || ||||||||||| |||||||||||||| ||||||||| || Sbjct: 1079122 accttggagatggtgagagctgggctccactggtccttgaggatgtcaaggcagatgttg 1079063 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 || ||| ||| |||||||| ||| ||||||| Sbjct: 1079062 ccattgctgtttatgtttggatggaacacctt 1079031 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 379 ctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtgg 438 |||||||||||||| | ||| || ||||| ||||| |||||| || |||||||||||| Sbjct: 9117619 ctccactgctccttcaagatatcaaggcatatgcttccgttgctattaatgtttgggtgg 9117560 Query: 439 tacacctttgt 449 |||||||||| Sbjct: 9117559 aacacctttgt 9117549 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 215 agcccatggcgtacttctgggtccag 240 ||||||||||||||||||| |||||| Sbjct: 1079369 agcccatggcgtacttctgcgtccag 1079344 Score = 40.1 bits (20), Expect = 6.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 289 gcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagc 340 ||||||||||| || || |||||||| ||||| ||||| || ||||| |||| Sbjct: 1079295 gcgatctccggcaccagcggatcgtccgggttcgggtccgtcagcagcgagc 1079244
>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1020_C02 Length = 124578 Score = 79.8 bits (40), Expect = 7e-12 Identities = 79/92 (85%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| || || ||||||||||| |||||||||||||| ||||||||| || Sbjct: 31646 accttggagatggtgagagctgggctccactggtccttgaggatgtcaaggcagatgttg 31587 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 || ||| ||| |||||||| ||| ||||||| Sbjct: 31586 ccattgctgtttatgtttggatggaacacctt 31555 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 215 agcccatggcgtacttctgggtccag 240 ||||||||||||||||||| |||||| Sbjct: 31893 agcccatggcgtacttctgcgtccag 31868 Score = 40.1 bits (20), Expect = 6.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 289 gcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagc 340 ||||||||||| || || |||||||| ||||| ||||| || ||||| |||| Sbjct: 31819 gcgatctccggcaccagcggatcgtccgggttcgggtccgtcagcagcgagc 31768
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 79.8 bits (40), Expect = 7e-12 Identities = 79/92 (85%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| || || ||||||||||| |||||||||||||| ||||||||| || Sbjct: 67830 accttggagatggtgagagctgggctccactggtccttgaggatgtcaaggcagatgttg 67771 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 || ||| ||| |||||||| ||| ||||||| Sbjct: 67770 ccattgctgtttatgtttggatggaacacctt 67739 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 215 agcccatggcgtacttctgggtccag 240 ||||||||||||||||||| |||||| Sbjct: 68077 agcccatggcgtacttctgcgtccag 68052 Score = 40.1 bits (20), Expect = 6.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 289 gcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagc 340 ||||||||||| || || |||||||| ||||| ||||| || ||||| |||| Sbjct: 68003 gcgatctccggcaccagcggatcgtccgggttcgggtccgtcagcagcgagc 67952
>ref|XM_370047.1| Magnaporthe grisea 70-15 hypothetical protein (MG06562.4) partial mRNA Length = 465 Score = 77.8 bits (39), Expect = 3e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 310 tcgtcggggttggggtctgtaagcagggagctgatggagagtaggaccttggatatggtc 369 ||||||||||||||||| ||||||| |||| ||||||||| || || || || || ||| Sbjct: 371 tcgtcggggttggggtcggtaagcatagagcagatggagagaagaactttagaaatagtc 312 Query: 370 agcgccgggctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatg 429 || ||||||||||| || || || ||||| |||||||||||||||||| |||||| Sbjct: 311 agagccgggctccattggtctcgcagaatgtcgaggcagatgctgccgttgctgttgata 252 Query: 430 tttgggtggta 440 || |||||||| Sbjct: 251 ttcgggtggta 241
>emb|BX649590.15| Zebrafish DNA sequence from clone CH211-143I6 in linkage group 9, complete sequence Length = 120653 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 324 gtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctcca 383 |||||| ||||| || | |||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 73354 gtctgtcagcagagaacagatggaaagcaggaccttggagatggtcagagccgggctcca 73413 Query: 384 ctgctccttgaggatgtccaggcagat 410 | ||||| ||||||||||||||||| Sbjct: 73414 gttatccttcaggatgtccaggcagat 73440
>ref|NM_191104.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 75.8 bits (38), Expect = 1e-10 Identities = 128/158 (81%) Strand = Plus / Minus Query: 292 atctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggagagt 351 ||||| |||||||| || ||||| ||||||||||| || ||||| |||| ||| || || Sbjct: 368 atctcagggacaagagggtcgtccgggttggggtcagtgagcagcgagcagatcgaaagc 309 Query: 352 aggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatg 411 | |||||| ||||| |||| || ||||||||||| ||||| || ||||| ||||| ||| Sbjct: 308 aagaccttagatattgtcaaagcagggctccactgttccttaagaatgtcgaggcatatg 249 Query: 412 ctgccgttggagttgatgtttgggtggtacacctttgt 449 || || ||| ||||||||||| ||| | |||||||| Sbjct: 248 cttccattgctattgatgtttggatggaagacctttgt 211 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 cccatggcgtacttctgggtccag 240 |||||||| ||||||||||||||| Sbjct: 443 cccatggcatacttctgggtccag 420
>gb|U17250.1|BCSC1 Brassica oleracea ubiquitine conjugating enzyme mRNA, partial cds Length = 607 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Minus Query: 307 ggatcgtcggggttggggtctgtaagcagggagctgatggagagtaggaccttggatatg 366 ||||| || ||||| || ||||| ||||| |||| || || || ||||||||||||||| Sbjct: 296 ggatcatcagggtttggatctgtcagcagtgagcatatcgaaagaaggaccttggatatg 237 Query: 367 gtcagcgccgggctccactgctccttgaggatgtccaggcagatgctgcc 416 || ||||| |||||||||||||| || || ||||| || ||||||||||| Sbjct: 236 gtaagcgcagggctccactgctctttcagaatgtcaagacagatgctgcc 187
>gb|U66493.1|MAU66493 Metarhizium anisopliae ubiquitin conjugating enzyme (MET-UBC1) mRNA, complete cds Length = 405 Score = 73.8 bits (37), Expect = 5e-10 Identities = 121/149 (81%) Strand = Plus / Minus Query: 292 atctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggagagt 351 ||||| || ||||| ||||| || ||||||||||| ||||||| ||| | ||||| || Sbjct: 329 atctcgggtacaagaggatcatcagggttggggtcggtaagcatggaacaaatggaaaga 270 Query: 352 aggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatg 411 || || || || ||||| || || |||||||| || || |||||||||| ||||||| Sbjct: 269 agcactttagagatggtgagagcagggctccattggtctcgcaggatgtccaagcagatg 210 Query: 412 ctgccgttggagttgatgtttgggtggta 440 ||||| ||||||||||| ||||||||||| Sbjct: 209 ctgccattggagttgatatttgggtggta 181
>gb|DQ350764.1| Ajellomyces capsulatus ubiquitin-conjugating enzyme E2-like protein (UBC1) gene, partial sequence Length = 1874 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 361 gatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctgccgttg 420 ||||| ||||| || |||||||| || || |||||||||||||||| ||||| ||||| Sbjct: 1213 gatatagtcagggcagggctccattggtctctgaggatgtccaggcaaatgctcccgttt 1154 Query: 421 gagttgatgtttgggtggta 440 |||||||||||||| ||||| Sbjct: 1153 gagttgatgtttggatggta 1134
>gb|DQ284472.1| Solanum tuberosum clone 116D11 ubiquitin-conjugating protein-like mRNA, complete cds Length = 531 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 301 acaaggggatcgtcggggttggggtctgtaagcagggagctgatggagagtaggaccttg 360 ||||| ||||| || ||||| |||||||| | ||| |||| |||||| || ||||||||| Sbjct: 281 acaagaggatcatctgggtttgggtctgtcaacagagagcagatggacagcaggaccttg 222 Query: 361 gatatggtcagcgccgggctccactgctccttgaggatgtccag 404 |||||||| | || || ||||||||||||||||| || ||||| Sbjct: 221 gatatggttaatgctggactccactgctccttgagaatatccag 178
>gb|BT016295.1| Zea mays clone Contig128 mRNA sequence Length = 788 Score = 69.9 bits (35), Expect = 7e-09 Identities = 119/147 (80%) Strand = Plus / Minus Query: 292 atctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggagagt 351 ||||| |||||||| ||||| || ||||| ||||| || ||||| |||| ||| || || Sbjct: 493 atctcagggacaagaggatcatcagggtttgggtccgtgagcagtgagcagattgacagg 434 Query: 352 aggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatg 411 || ||||| || || || | || ||||||||||| ||||| || ||||| ||||| ||| Sbjct: 433 agaacctttgagatagttaaagcagggctccactgttccttaagaatgtcaaggcaaatg 374 Query: 412 ctgccgttggagttgatgtttgggtgg 438 ||||||||| ||||||||| |||||| Sbjct: 373 ctgccgttgctgttgatgttcgggtgg 347
>gb|BC067146.1| Danio rerio ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast), mRNA (cDNA clone MGC:76906 IMAGE:6524025), complete cds Length = 1580 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 324 gtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctcca 383 |||||| ||||| || | |||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 628 gtctgtcagcagagaacagatggaaagcaggaccttggagatggtcagagccgggctcca 569 Query: 384 ctgctccttgaggatgtccaggcagat 410 | ||||| ||||| ||||||||||| Sbjct: 568 gttatccttcaggatatccaggcagat 542
>gb|BC042331.1| Danio rerio ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast), mRNA (cDNA clone MGC:55923 IMAGE:3819145), complete cds Length = 1126 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 324 gtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctcca 383 |||||| ||||| || | |||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 638 gtctgtcagcagagaacagatggaaagcaggaccttggagatggtcagagccgggctcca 579 Query: 384 ctgctccttgaggatgtccaggcagat 410 | ||||| ||||| ||||||||||| Sbjct: 578 gttatccttcaggatatccaggcagat 552
>ref|NM_200921.2| Danio rerio ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) (ube2e3), mRNA Length = 1580 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 324 gtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctcca 383 |||||| ||||| || | |||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 628 gtctgtcagcagagaacagatggaaagcaggaccttggagatggtcagagccgggctcca 569 Query: 384 ctgctccttgaggatgtccaggcagat 410 | ||||| ||||| ||||||||||| Sbjct: 568 gttatccttcaggatatccaggcagat 542
>ref|XM_341288.2| PREDICTED: Rattus norvegicus ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) (predicted) (Ube2e2_predicted), mRNA Length = 1170 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 324 gtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctcca 383 ||||||||| || |||| |||||| || ||||| || || |||||||| ||||| ||||| Sbjct: 510 gtctgtaagtagtgagcagatggacaggaggactttagagatggtcagggccggactcca 451 Query: 384 ctgctccttgaggatgtccaggcagat 410 | ||||||||||||||||||||||| Sbjct: 450 gttgtccttgaggatgtccaggcagat 424
>ref|XM_474269.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 307 ggatcgtcggggttggggtctgtaagcagggagctgatggagagtaggaccttggatatg 366 ||||| |||||||| ||||| || ||||| || | || || || |||||||| |||||| Sbjct: 353 ggatcatcggggttcgggtccgtcagcagtgaacaaattgacaggaggacctttgatatg 294 Query: 367 gtcagcgccgggctccactgctccttgaggatgtccaggcagatgctgcc 416 || || || || |||||||| |||||||||||||| ||||| |||||||| Sbjct: 293 gtaagtgcaggactccactgttccttgaggatgtcgaggcaaatgctgcc 244 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 215 agcccatggcgtacttctgggtccagg 241 ||||||||||||||||||| ||||||| Sbjct: 445 agcccatggcgtacttctgtgtccagg 419
>ref|NM_192451.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1125 Score = 67.9 bits (34), Expect = 3e-08 Identities = 118/146 (80%) Strand = Plus / Minus Query: 289 gcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggag 348 |||||||| ||||| || ||||| || ||||| || || || |||||||| | ||| || Sbjct: 824 gcgatctcagggaccagaggatcatcagggttcggatcagtcagcagggaacagattgac 765 Query: 349 agtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcag 408 || | |||||||| ||||| || || |||||||| || ||||| |||||||| ||||| Sbjct: 764 agcaacaccttggaaatggttagtgctgggctccattggtccttaaggatgtcaaggcaa 705 Query: 409 atgctgccgttggagttgatgtttgg 434 ||||| |||||| |||||||||||| Sbjct: 704 atgctcccgttgctgttgatgtttgg 679
>ref|XM_752036.1| Ustilago maydis 521 ubiquitin-conjugating enzyme E2-16 kDa (UM00982.1) partial mRNA Length = 444 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||||||||| || |||||||| || |||| ||||| || ||||||||| Sbjct: 305 accttggagatggtcagcgctggactccactggtctctgagaatgtcgagacagatgctg 246 Query: 415 ccgttggagttgatgtttgggtggta 440 |||||| ||||||||| || ||||| Sbjct: 245 ccgttgctgttgatgttcggatggta 220
>ref|XM_502855.1| Yarrowia lipolytica CLIB122, YALI0D15312g predicted mRNA Length = 444 Score = 67.9 bits (34), Expect = 3e-08 Identities = 109/134 (81%) Strand = Plus / Minus Query: 307 ggatcgtcggggttggggtctgtaagcagggagctgatggagagtaggaccttggatatg 366 |||||||| |||||||||||||| |||| ||||| |||||| || || |||||||| ||| Sbjct: 353 ggatcgtcagggttggggtctgtgagcatggagcagatggacagcagcaccttggagatg 294 Query: 367 gtcagcgccgggctccactgctccttgaggatgtccaggcagatgctgccgttggagttg 426 || || || || ||| | ||||||||| || ||||| |||||| ||||||| |||| Sbjct: 293 gtgagtgcgggagaccagttctccttgagaatatccagacagatggatccgttggtgttg 234 Query: 427 atgtttgggtggta 440 | ||| |||||||| Sbjct: 233 acgttggggtggta 220
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 376 gggctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttggg 435 ||||||||||| ||||| ||||| || ||||||||||| ||||| ||||||||||||| Sbjct: 17798014 gggctccactgttccttcaggatatcaaggcagatgcttccgttactgttgatgtttggg 17798073 Query: 436 tggtacacctttgt 449 ||| | |||||||| Sbjct: 17798074 tggaaaacctttgt 17798087 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 213 tcagcccatggcgtacttctgggtccaggccctcgc 248 ||||||||| || || |||||||||||| ||||||| Sbjct: 17797574 tcagcccattgcatatttctgggtccagcccctcgc 17797609
>dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0561B08 Length = 161083 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 376 gggctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttggg 435 ||||||||||| ||||| ||||| || ||||||||||| ||||| ||||||||||||| Sbjct: 3203 gggctccactgttccttcaggatatcaaggcagatgcttccgttactgttgatgtttggg 3262 Query: 436 tggtacacctttgt 449 ||| | |||||||| Sbjct: 3263 tggaaaacctttgt 3276 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 213 tcagcccatggcgtacttctgggtccaggccctcgc 248 ||||||||| || || |||||||||||| ||||||| Sbjct: 2763 tcagcccattgcatatttctgggtccagcccctcgc 2798
>dbj|AP004743.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0026G06 Length = 123129 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 376 gggctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttggg 435 ||||||||||| ||||| ||||| || ||||||||||| ||||| ||||||||||||| Sbjct: 68436 gggctccactgttccttcaggatatcaaggcagatgcttccgttactgttgatgtttggg 68495 Query: 436 tggtacacctttgt 449 ||| | |||||||| Sbjct: 68496 tggaaaacctttgt 68509 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 213 tcagcccatggcgtacttctgggtccaggccctcgc 248 ||||||||| || || |||||||||||| ||||||| Sbjct: 67996 tcagcccattgcatatttctgggtccagcccctcgc 68031
>dbj|AK119682.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-A01, full insert sequence Length = 832 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 307 ggatcgtcggggttggggtctgtaagcagggagctgatggagagtaggaccttggatatg 366 ||||| |||||||| ||||| || ||||| || | || || || |||||||| |||||| Sbjct: 508 ggatcatcggggttcgggtccgtcagcagtgaacaaattgacaggaggacctttgatatg 449 Query: 367 gtcagcgccgggctccactgctccttgaggatgtccaggcagatgctgcc 416 || || || || |||||||| |||||||||||||| ||||| |||||||| Sbjct: 448 gtaagtgcaggactccactgttccttgaggatgtcgaggcaaatgctgcc 399 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 215 agcccatggcgtacttctgggtccagg 241 ||||||||||||||||||| ||||||| Sbjct: 600 agcccatggcgtacttctgtgtccagg 574
>dbj|AK099284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023129D13, full insert sequence Length = 754 Score = 67.9 bits (34), Expect = 3e-08 Identities = 118/146 (80%) Strand = Plus / Minus Query: 289 gcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggag 348 |||||||| ||||| || ||||| || ||||| || || || |||||||| | ||| || Sbjct: 476 gcgatctcagggaccagaggatcatcagggttcggatcagtcagcagggaacagattgac 417 Query: 349 agtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcag 408 || | |||||||| ||||| || || |||||||| || ||||| |||||||| ||||| Sbjct: 416 agcaacaccttggaaatggttagtgctgggctccattggtccttaaggatgtcaaggcaa 357 Query: 409 atgctgccgttggagttgatgtttgg 434 ||||| |||||| |||||||||||| Sbjct: 356 atgctcccgttgctgttgatgtttgg 331
>dbj|AK066232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057M05, full insert sequence Length = 2141 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 376 gggctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttggg 435 ||||||||||| ||||| ||||| || ||||||||||| ||||| ||||||||||||| Sbjct: 1539 gggctccactgttccttcaggatatcaaggcagatgcttccgttactgttgatgtttggg 1480 Query: 436 tggtacacctttgt 449 ||| | |||||||| Sbjct: 1479 tggaaaacctttgt 1466 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 213 tcagcccatggcgtacttctgggtccaggccctcgc 248 ||||||||| || || |||||||||||| ||||||| Sbjct: 1979 tcagcccattgcatatttctgggtccagcccctcgc 1944
>dbj|AK063826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-A09, full insert sequence Length = 767 Score = 67.9 bits (34), Expect = 3e-08 Identities = 118/146 (80%) Strand = Plus / Minus Query: 289 gcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggag 348 |||||||| ||||| || ||||| || ||||| || || || |||||||| | ||| || Sbjct: 486 gcgatctcagggaccagaggatcatcagggttcggatcagtcagcagggaacagattgac 427 Query: 349 agtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcag 408 || | |||||||| ||||| || || |||||||| || ||||| |||||||| ||||| Sbjct: 426 agcaacaccttggaaatggttagtgctgggctccattggtccttaaggatgtcaaggcaa 367 Query: 409 atgctgccgttggagttgatgtttgg 434 ||||| |||||| |||||||||||| Sbjct: 366 atgctcccgttgctgttgatgtttgg 341
>emb|AJ867286.1| Oryza sativa (indica cultivar-group) mRNA for ubiquitin conjugating enzyme E2 (ubc4 gene) Length = 444 Score = 67.9 bits (34), Expect = 3e-08 Identities = 118/146 (80%) Strand = Plus / Minus Query: 289 gcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggag 348 |||||||| ||||| || ||||| || ||||| || || || |||||||| | ||| || Sbjct: 371 gcgatctcagggaccagaggatcatcagggttcggatcagtcagcagggaacagattgac 312 Query: 349 agtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcag 408 || | |||||||| ||||| || || |||||||| || ||||| |||||||| ||||| Sbjct: 311 agcaacaccttggaaatggttagtgctgggctccattggtccttaaggatgtcaaggcaa 252 Query: 409 atgctgccgttggagttgatgtttgg 434 ||||| |||||| |||||||||||| Sbjct: 251 atgctcccgttgctgttgatgtttgg 226
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 67.9 bits (34), Expect = 3e-08 Identities = 109/134 (81%) Strand = Plus / Plus Query: 307 ggatcgtcggggttggggtctgtaagcagggagctgatggagagtaggaccttggatatg 366 |||||||| |||||||||||||| |||| ||||| |||||| || || |||||||| ||| Sbjct: 1866541 ggatcgtcagggttggggtctgtgagcatggagcagatggacagcagcaccttggagatg 1866600 Query: 367 gtcagcgccgggctccactgctccttgaggatgtccaggcagatgctgccgttggagttg 426 || || || || ||| | ||||||||| || ||||| |||||| ||||||| |||| Sbjct: 1866601 gtgagtgcgggagaccagttctccttgagaatatccagacagatggatccgttggtgttg 1866660 Query: 427 atgtttgggtggta 440 | ||| |||||||| Sbjct: 1866661 acgttggggtggta 1866674
>gb|U15971.1|OSU15971 Oryza sativa ubiquitin conjugating enzyme (UBC) gene, complete cds Length = 2088 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 376 gggctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttggg 435 ||||||||||| ||||| ||||| || ||||||||||| ||||| ||||||||||||| Sbjct: 1559 gggctccactgttccttcaggatatcaaggcagatgcttccgttactgttgatgtttggg 1500 Query: 436 tggtacacctttgt 449 ||| | |||||||| Sbjct: 1499 tggaaaacctttgt 1486 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 213 tcagcccatggcgtacttctgggtccaggccctcgc 248 ||||||||| || || |||||||||||| ||||||| Sbjct: 1974 tcagcccattgcatatttctgggtccagcccctcgc 1939
>dbj|AB074411.1| Oryza sativa (japonica cultivar-group) mRNA for ubiquitin-conjugating enzyme OsUBC5a, complete cds Length = 731 Score = 67.9 bits (34), Expect = 3e-08 Identities = 118/146 (80%) Strand = Plus / Minus Query: 289 gcgatctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggag 348 |||||||| ||||| || ||||| || ||||| || || || |||||||| | ||| || Sbjct: 474 gcgatctcagggaccagaggatcatcagggttcggatcagtcagcagggaacagattgac 415 Query: 349 agtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcag 408 || | |||||||| ||||| || || |||||||| || ||||| |||||||| ||||| Sbjct: 414 agcaacaccttggaaatggttagtgctgggctccattggtccttaaggatgtcaaggcaa 355 Query: 409 atgctgccgttggagttgatgtttgg 434 ||||| |||||| |||||||||||| Sbjct: 354 atgctcccgttgctgttgatgtttgg 329
>emb|CR646344.2|CNS0EXOU Tetraodon nigroviridis full-length cDNA Length = 1178 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 314 cggggttggggtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcg 373 |||||||| ||| || |||||||||| |||||| || ||||||||||| ||||| || | Sbjct: 582 cggggttgcagtcggtcagcagggagcagatggacaggaggaccttggagatggtgaggg 523 Query: 374 ccgggctccactgctccttgaggatgtccaggcagat 410 | || ||||| | ||||| ||||||||||||||||| Sbjct: 522 caggactccagttgtccttcaggatgtccaggcagat 486
>emb|X73419.1|LEUBC L.esculentum mRNA for ubiquitin conjugating enzyme E2 Length = 686 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Minus Query: 313 tcggggttggggtctgtaagcagggagctgatggagagtaggaccttggatatggtcagc 372 ||||| || |||||||| ||||| || | ||| ||||| || |||||||| ||||| || Sbjct: 359 tcgggattagggtctgtcagcagagaacagatagagagcagtaccttggagatggtaagt 300 Query: 373 gccgggctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgttt 432 || ||||||||||| ||||| | ||||| ||||| |||||||| ||| |||||||| Sbjct: 299 gcagggctccactgttccttcaaaatgtcaaggcaaatgctgccattgctattgatgttc 240 Query: 433 gggtggtacacctttgt 449 |||||| | |||||||| Sbjct: 239 gggtggaaaacctttgt 223
>gb|AY083611.1| Oryza sativa elicitor and UV light related transcription factor (Elr) mRNA, complete cds Length = 576 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 352 aggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatg 411 |||||||| |||||||| || || || |||||||| |||||||||||||| ||||| ||| Sbjct: 431 aggacctttgatatggtaagtgcaggactccactgttccttgaggatgtcgaggcaaatg 372 Query: 412 ctgcc 416 ||||| Sbjct: 371 ctgcc 367
>dbj|D17786.1|RICKN6922 Oryza sativa KN69 mRNA for ubiquitin-conjugating enzyme, partial CDS Length = 311 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 352 aggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatg 411 |||||||| |||||||| || || || |||||||| |||||||||||||| ||||| ||| Sbjct: 203 aggacctttgatatggtaagtgcaggactccactgttccttgaggatgtcgaggcaaatg 144 Query: 412 ctgcc 416 ||||| Sbjct: 143 ctgcc 139
>emb|BX629356.1|CNS09SBW Tetraodon nigroviridis BAC sequence Length = 101385 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 314 cggggttggggtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcg 373 |||||||| ||| || |||||||||| |||||| || ||||||||||| ||||| || | Sbjct: 39597 cggggttgcagtcggtcagcagggagcagatggacaggaggaccttggagatggtgaggg 39538 Query: 374 ccgggctccactgctccttgaggatgtccaggcagat 410 | || ||||| | ||||| ||||||||||||||||| Sbjct: 39537 caggactccagttgtccttcaggatgtccaggcagat 39501 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 314 cggggttggggtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcg 373 |||||||| ||| || |||||||||| |||||| || ||||||||||| ||||| || | Sbjct: 32328 cggggttgcagtcggtcagcagggagcagatggacaggaggaccttggagatggtgaggg 32269 Query: 374 ccgggctccactgctccttgaggatgtccaggcagat 410 | || ||||| | ||||| ||||||||||||||||| Sbjct: 32268 caggactccagttgtccttcaggatgtccaggcagat 32232
>ref|NM_124709.2| Arabidopsis thaliana UBC10; ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G53300 (UBC10) transcript variant AT5G53300.2 mRNA, complete cds Length = 837 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| ||||| || |||||||||||||| | |||||| ||||| ||||| Sbjct: 407 accttggaaatggtgagcgcaggactccactgctccttcaagatgtcgaggcaaatgcta 348 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 |||||| ||| ||||| || ||| ||||||| Sbjct: 347 ccgttgctgttaatgttgggatggaacacctt 316
>ref|NM_180850.1| Arabidopsis thaliana UBC10; ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G53300 (UBC10) transcript variant AT5G53300.1 mRNA, complete cds Length = 856 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| ||||| || |||||||||||||| | |||||| ||||| ||||| Sbjct: 426 accttggaaatggtgagcgcaggactccactgctccttcaagatgtcgaggcaaatgcta 367 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 |||||| ||| ||||| || ||| ||||||| Sbjct: 366 ccgttgctgttaatgttgggatggaacacctt 335
>gb|DQ222513.1| Solanum tuberosum clone 117E03 ubiquitin conjugating enzyme E2-like mRNA, complete cds Length = 835 Score = 63.9 bits (32), Expect = 4e-07 Identities = 104/128 (81%) Strand = Plus / Minus Query: 322 gggtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctc 381 |||||||| ||||| || | ||| ||||| || |||||||| ||||| || || |||||| Sbjct: 383 gggtctgtcagcagagaacagatagagagcagtaccttggagatggtaagtgcagggctc 324 Query: 382 cactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtggtac 441 ||||| ||||| | ||||| ||||| |||||||| ||| |||||||| |||||| | Sbjct: 323 cactgttccttcaaaatgtctaggcatatgctgccattgctattgatgttcgggtggaaa 264 Query: 442 acctttgt 449 |||||||| Sbjct: 263 acctttgt 256
>gb|DQ207855.1| Solanum tuberosum clone 078A09 ubiquitin-conjugating enzyme 8-like mRNA, complete cds Length = 757 Score = 63.9 bits (32), Expect = 4e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 322 gggtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctc 381 ||||| || ||||| |||| ||| || || || |||||||| || || || ||||||||| Sbjct: 401 gggtccgttagcagagagcagattgacagcagcaccttggaaatcgtaagtgccgggctc 342 Query: 382 cactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtg 437 || || ||||| || ||||| ||||| |||||||| ||| ||||||||||||||| Sbjct: 341 cattgttccttcagaatgtcgaggcaaatgctgccattgctgttgatgtttgggtg 286
>gb|BT013767.1| Lycopersicon esculentum clone 132651R, mRNA sequence Length = 844 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 301 acaaggggatcgtcggggttggggtctgtaagcagggagctgatggagagtaggaccttg 360 ||||| ||||| || ||||| |||||||| | ||| |||| |||||| || ||||||||| Sbjct: 521 acaagaggatcatctgggtttgggtctgtcaacagagagcagatggacagcaggaccttg 462 Query: 361 gatatggtcagcgccgggctccactgctcctt 392 |||||||| | || || |||||||||||||| Sbjct: 461 gatatggttaatgctggactccactgctcctt 430
>emb|Z14991.1|ATUBC10 A.thaliana UBC10 mRNA for ubiquitin conjugating enzyme homolog Length = 818 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| ||||| || |||||||||||||| | |||||| ||||| ||||| Sbjct: 437 accttggaaatggtgagcgcaggactccactgctccttcaagatgtcgaggcaaatgcta 378 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 |||||| ||| ||||| || ||| ||||||| Sbjct: 377 ccgttgctgttaatgttgggatggaacacctt 346
>gb|AY113937.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC10 (At5g53300) mRNA, complete cds Length = 478 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| ||||| || |||||||||||||| | |||||| ||||| ||||| Sbjct: 305 accttggaaatggtgagcgcaggactccactgctccttcaagatgtcgaggcaaatgcta 246 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 |||||| ||| ||||| || ||| ||||||| Sbjct: 245 ccgttgctgttaatgttgggatggaacacctt 214
>gb|AF326872.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC10 (At5g53300) mRNA, complete cds Length = 768 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| ||||| || |||||||||||||| | |||||| ||||| ||||| Sbjct: 399 accttggaaatggtgagcgcaggactccactgctccttcaagatgtcgaggcaaatgcta 340 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 |||||| ||| ||||| || ||| ||||||| Sbjct: 339 ccgttgctgttaatgttgggatggaacacctt 308
>gb|AY129488.1| Arabidopsis thaliana AT5g53300/K19E1_10 mRNA, complete cds Length = 447 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| ||||| || |||||||||||||| | |||||| ||||| ||||| Sbjct: 305 accttggaaatggtgagcgcaggactccactgctccttcaagatgtcgaggcaaatgcta 246 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 |||||| ||| ||||| || ||| ||||||| Sbjct: 245 ccgttgctgttaatgttgggatggaacacctt 214
>gb|AY065059.1| Arabidopsis thaliana AT5g53300/K19E1_10 mRNA, complete cds Length = 752 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| ||||| || |||||||||||||| | |||||| ||||| ||||| Sbjct: 399 accttggaaatggtgagcgcaggactccactgctccttcaagatgtcgaggcaaatgcta 340 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 |||||| ||| ||||| || ||| ||||||| Sbjct: 339 ccgttgctgttaatgttgggatggaacacctt 308
>gb|AY039566.1| Arabidopsis thaliana AT5g53300/K19E1_10 mRNA, complete cds Length = 713 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| ||||| || |||||||||||||| | |||||| ||||| ||||| Sbjct: 403 accttggaaatggtgagcgcaggactccactgctccttcaagatgtcgaggcaaatgcta 344 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 |||||| ||| ||||| || ||| ||||||| Sbjct: 343 ccgttgctgttaatgttgggatggaacacctt 312
>gb|AF325005.2|AF325005 Arabidopsis thaliana AT5g53300 (AT5g53300/K19E1_10) mRNA, complete cds Length = 731 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| ||||| || |||||||||||||| | |||||| ||||| ||||| Sbjct: 394 accttggaaatggtgagcgcaggactccactgctccttcaagatgtcgaggcaaatgcta 335 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 |||||| ||| ||||| || ||| ||||||| Sbjct: 334 ccgttgctgttaatgttgggatggaacacctt 303
>gb|AF324718.2|AF324718 Arabidopsis thaliana AT5g53300 (AT5g53300/K19E1_10) mRNA, complete cds Length = 748 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| ||||| || |||||||||||||| | |||||| ||||| ||||| Sbjct: 395 accttggaaatggtgagcgcaggactccactgctccttcaagatgtcgaggcaaatgcta 336 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 |||||| ||| ||||| || ||| ||||||| Sbjct: 335 ccgttgctgttaatgttgggatggaacacctt 304
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| || || |||||||| || ||||| |||||||| ||||| ||||| Sbjct: 26774827 accttggaaatggttagtgctgggctccattggtccttaaggatgtcaaggcaaatgctc 26774886 Query: 415 ccgttggagttgatgtttgg 434 |||||| |||||||||||| Sbjct: 26774887 ccgttgctgttgatgtttgg 26774906 Score = 46.1 bits (23), Expect = 0.10 Identities = 77/95 (81%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 ||||| ||||| |||| || ||||||||||| ||||| || ||||| ||||| ||||| Sbjct: 34912131 accttagatattgtcaaagcagggctccactgttccttaagaatgtcgaggcatatgctt 34912072 Query: 415 ccgttggagttgatgtttgggtggtacacctttgt 449 || ||| ||||||||||| ||| | |||||||| Sbjct: 34912071 ccattgctattgatgtttggatggaagacctttgt 34912037 Score = 44.1 bits (22), Expect = 0.41 Identities = 61/74 (82%) Strand = Plus / Minus Query: 376 gggctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttggg 435 |||||||| |||||||| || ||||| ||||| ||||| || ||| ||||||||||| Sbjct: 34933602 gggctccattgctccttaagaatgtcaaggcatatgcttccattgctattgatgtttgga 34933543 Query: 436 tggtacacctttgt 449 ||| | |||||||| Sbjct: 34933542 tggaagacctttgt 34933529 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 212 atcagcccatggcgtacttctgggtccag 240 |||| |||||||| ||||||||||||||| Sbjct: 34934852 atcatcccatggcatacttctgggtccag 34934824 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 292 atctccgggacaaggggatcgtcggggttggggtctgtaagcagggagc 340 ||||| |||||||| || ||||| ||||||||||| || ||||| |||| Sbjct: 34934772 atctcagggacaagagggtcgtccgggttggggtcagtgagcagcgagc 34934724 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 292 atctccgggacaaggggatcgtcggggttggggtctgtaagcagggagc 340 ||||| |||||||| || ||||| ||||||||||| || ||||| |||| Sbjct: 34912589 atctcagggacaagagggtcgtccgggttggggtcagtgagcagcgagc 34912541 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 cccatggcgtacttctgggtccag 240 |||||||| ||||||||||||||| Sbjct: 34912664 cccatggcatacttctgggtccag 34912641
>emb|BX829864.1|CNS0A1IT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB41ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 708 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| ||||| || |||||||||||||| | |||||| ||||| ||||| Sbjct: 380 accttggaaatggtgagcgcaggactccactgctccttcaagatgtcgaggcaaatgcta 321 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 |||||| ||| ||||| || ||| ||||||| Sbjct: 320 ccgttgctgttaatgttgggatggaacacctt 289
>emb|BX833981.1|CNS0A0DI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL88ZC07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 769 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| ||||| || |||||||||||||| | |||||| ||||| ||||| Sbjct: 392 accttggaaatggtgagcgcaggactccactgctccttcaagatgtcgaggcaaatgcta 333 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 |||||| ||| ||||| || ||| ||||||| Sbjct: 332 ccgttgctgttaatgttgggatggaacacctt 301
>gb|AY086447.1| Arabidopsis thaliana clone 25162 mRNA, complete sequence Length = 743 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| ||||| || |||||||||||||| | |||||| ||||| ||||| Sbjct: 403 accttggaaatggtgagcgcaggactccactgctccttcaagatgtcgaggcaaatgcta 344 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 |||||| ||| ||||| || ||| ||||||| Sbjct: 343 ccgttgctgttaatgttgggatggaacacctt 312
>dbj|AP003291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684E06 Length = 147004 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| || || |||||||| || ||||| |||||||| ||||| ||||| Sbjct: 10476 accttggaaatggttagtgctgggctccattggtccttaaggatgtcaaggcaaatgctc 10535 Query: 415 ccgttggagttgatgtttgg 434 |||||| |||||||||||| Sbjct: 10536 ccgttgctgttgatgtttgg 10555
>dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0694A04 Length = 141476 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| || || |||||||| || ||||| |||||||| ||||| ||||| Sbjct: 121919 accttggaaatggttagtgctgggctccattggtccttaaggatgtcaaggcaaatgctc 121978 Query: 415 ccgttggagttgatgtttgg 434 |||||| |||||||||||| Sbjct: 121979 ccgttgctgttgatgtttgg 121998
>dbj|AB013388.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19E1 Length = 73428 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| ||||| || |||||||||||||| | |||||| ||||| ||||| Sbjct: 47401 accttggaaatggtgagcgcaggactccactgctccttcaagatgtcgaggcaaatgcta 47460 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 |||||| ||| ||||| || ||| ||||||| Sbjct: 47461 ccgttgctgttaatgttgggatggaacacctt 47492
>gb|DQ027024.1| Arabidopsis thaliana ubiquitinating enzyme (At5g53300) mRNA, complete cds Length = 447 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| ||||| || |||||||||||||| | |||||| ||||| ||||| Sbjct: 305 accttggaaatggtgagcgcaggactccactgctccttcaagatgtcgaggcaaatgcta 246 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 |||||| ||| ||||| || ||| ||||||| Sbjct: 245 ccgttgctgttaatgttgggatggaacacctt 214
>gb|L23762.1|TOM1KUC Lycopersicon esculentum ubiquitin carrier protein (Ubc) mRNA, complete cds Length = 825 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 301 acaaggggatcgtcggggttggggtctgtaagcagggagctgatggagagtaggaccttg 360 ||||| ||||| || ||||| |||||||| | ||| |||| |||||| || ||||||||| Sbjct: 525 acaagaggatcatctgggtttgggtctgtcaacagagagcagatggacagcaggaccttg 466 Query: 361 gatatggtcagcgccgggctccactgctcctt 392 |||||||| | || || |||||||||||||| Sbjct: 465 gatatggttaatgctggactccactgctcctt 434
>gb|L00640.1|ATHUBCC Arabidopsis thaliana ubiquitin conjugating enzyme mRNA, complete cds Length = 818 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||| ||||| ||||| || |||||||||||||| | |||||| ||||| ||||| Sbjct: 437 accttggaaatggtgagcgcaggactccactgctccttcaagatgtcgaggcaaatgcta 378 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 |||||| ||| ||||| || ||| ||||||| Sbjct: 377 ccgttgctgttaatgttgggatggaacacctt 346
>gb|BC016265.1| Mus musculus ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast), mRNA (cDNA clone MGC:28917 IMAGE:4923869), complete cds Length = 1410 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 324 gtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctcca 383 ||||||||| || |||| |||||| || ||||| || || |||||||| ||||| ||||| Sbjct: 549 gtctgtaagtagtgagcagatggacaggaggactttagagatggtcagggccggactcca 490 Query: 384 ctgctccttgaggatgtccaggcagat 410 | ||||||||||||||||| ||||| Sbjct: 489 gttgtccttgaggatgtccagacagat 463
>ref|NM_144839.1| Mus musculus ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) (Ube2e2), mRNA Length = 1410 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 324 gtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctcca 383 ||||||||| || |||| |||||| || ||||| || || |||||||| ||||| ||||| Sbjct: 549 gtctgtaagtagtgagcagatggacaggaggactttagagatggtcagggccggactcca 490 Query: 384 ctgctccttgaggatgtccaggcagat 410 | ||||||||||||||||| ||||| Sbjct: 489 gttgtccttgaggatgtccagacagat 463
>gb|AC132459.3| Mus musculus BAC clone RP23-152I2 from chromosome 14, complete sequence Length = 186486 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 324 gtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctcca 383 ||||||||| || |||| |||||| || ||||| || || |||||||| ||||| ||||| Sbjct: 147068 gtctgtaagtagtgagcagatggacaggaggactttagagatggtcagggccggactcca 147009 Query: 384 ctgctccttgaggatgtccaggcagat 410 | ||||||||||||||||| ||||| Sbjct: 147008 gttgtccttgaggatgtccagacagat 146982
>gb|AC154287.2| Mus musculus BAC clone RP24-484I9 from chromosome 14, complete sequence Length = 165637 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 324 gtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctcca 383 ||||||||| || |||| |||||| || ||||| || || |||||||| ||||| ||||| Sbjct: 39741 gtctgtaagtagtgagcagatggacaggaggactttagagatggtcagggccggactcca 39682 Query: 384 ctgctccttgaggatgtccaggcagat 410 | ||||||||||||||||| ||||| Sbjct: 39681 gttgtccttgaggatgtccagacagat 39655
>gb|AY109692.1| Zea mays CL301_1 mRNA sequence Length = 912 Score = 61.9 bits (31), Expect = 2e-06 Identities = 118/147 (80%) Strand = Plus / Minus Query: 292 atctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggagagt 351 ||||| |||||||| ||||| || ||||| ||||| || ||||| |||| ||| || || Sbjct: 492 atctcagggacaagaggatcatcagggtttgggtccgtgagcagtgagcagattgacagg 433 Query: 352 aggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatg 411 || ||||| || || || | || || |||||||| ||||| || ||||| ||||| ||| Sbjct: 432 agaacctttgagatagttaaagcaggactccactgttccttaagaatgtcaaggcaaatg 373 Query: 412 ctgccgttggagttgatgtttgggtgg 438 ||||||||| ||||||||| |||||| Sbjct: 372 ctgccgttgctgttgatgttcgggtgg 346
>ref|NM_191107.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 60.0 bits (30), Expect = 7e-06 Identities = 126/158 (79%) Strand = Plus / Minus Query: 292 atctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggagagt 351 ||||| |||||||| || ||||| ||||||||||| || ||||| |||| ||| || || Sbjct: 368 atctcagggacaagagggtcgtccgggttggggtcagtgagcagcgagcagatcgaaagc 309 Query: 352 aggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatg 411 | ||||| || || |||| || |||||||| |||||||| || ||||| ||||| ||| Sbjct: 308 aacaccttagaaattgtcaaagcagggctccattgctccttaagaatgtcaaggcatatg 249 Query: 412 ctgccgttggagttgatgtttgggtggtacacctttgt 449 || || ||| ||||||||||| ||| | |||||||| Sbjct: 248 cttccattgctattgatgtttggatggaagacctttgt 211 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 cccatggcgtacttctgggtccag 240 |||||||| ||||||||||||||| Sbjct: 443 cccatggcatacttctgggtccag 420
>ref|XM_390981.1| Gibberella zeae PH-1 chromosome 3 UBC1_COLGL Ubiquitin-conjugating enzyme E2-16 kDa (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (Colletotrichum hard-s> (FG10805.1) partial mRNA Length = 420 Score = 60.0 bits (30), Expect = 7e-06 Identities = 108/134 (80%) Strand = Plus / Minus Query: 307 ggatcgtcggggttggggtctgtaagcagggagctgatggagagtaggaccttggatatg 366 |||||||| |||||||| || || |||| |||| |||||| || || || || || ||| Sbjct: 329 ggatcgtcagggttgggatccgttagcattgagcagatggacagaagaactttagagatg 270 Query: 367 gtcagcgccgggctccactgctccttgaggatgtccaggcagatgctgccgttggagttg 426 |||| || ||||||||||| || ||| || |||| ||||||||| ||||| |||||| Sbjct: 269 gtcaaagcagggctccactggtcacggagaatatccaagcagatgcttccgttagagttg 210 Query: 427 atgtttgggtggta 440 ||||| |||||||| Sbjct: 209 atgttggggtggta 196
>ref|XM_445894.1| Candida glabrata CBS138, CAGL0E04752g partial mRNA Length = 444 Score = 60.0 bits (30), Expect = 7e-06 Identities = 108/134 (80%) Strand = Plus / Minus Query: 307 ggatcgtcggggttggggtctgtaagcagggagctgatggagagtaggaccttggatatg 366 |||||||| ||||||| |||||| |||| ||||| |||||| || |||||||| || | Sbjct: 353 ggatcgtctgggttggcgtctgtcagcaaggagcagatggaaagcaggaccttagaaagt 294 Query: 367 gtcagcgccgggctccactgctccttgaggatgtccaggcagatgctgccgttggagttg 426 || || || || |||||| ||||| ||||| ||||| |||||| | ||||| | |||| Sbjct: 293 gttagagctggagaccactggtccttcaggatatccagacagatgttaccgttagcgttg 234 Query: 427 atgtttgggtggta 440 || ||||||||||| Sbjct: 233 atatttgggtggta 220
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 60.0 bits (30), Expect = 7e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 307 ggatcgtcggggttggggtctgtaagcagggagctgatggagagtaggaccttggatatg 366 |||||||| ||||||| |||||| |||| ||||| |||||| || |||||||| || | Sbjct: 456056 ggatcgtctgggttggcgtctgtcagcaaggagcagatggaaagcaggaccttagaaagt 456115 Query: 367 gtcagcgccgggctccactgctccttgaggatgtccaggcagatgctgccgttggagttg 426 || || || || |||||| ||||| ||||| ||||| |||||| | ||||| | |||| Sbjct: 456116 gttagagctggagaccactggtccttcaggatatccagacagatgttaccgttagcgttg 456175 Query: 427 atgtttgggtggta 440 || ||||||||||| Sbjct: 456176 atatttgggtggta 456189 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 426 gatgtttgggtggtacacctt 446 ||||||||||||||||||||| Sbjct: 61862 gatgtttgggtggtacacctt 61882
>gb|AY952317.1| Triticum aestivum cultivar 7269-10 immature spike ubiquitin-conjugating enzyme 2 mRNA, complete cds Length = 853 Score = 60.0 bits (30), Expect = 7e-06 Identities = 99/122 (81%) Strand = Plus / Minus Query: 292 atctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggagagt 351 ||||| || ||||||||||| || |||||||| || || |||||||| | ||| ||||| Sbjct: 508 atctcgggaacaaggggatcatccgggttgggatcggtcagcagggaacagatagagagc 449 Query: 352 aggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatg 411 | |||||| || || |||| || ||||||||||||||||| || || || ||||| ||| Sbjct: 448 aagaccttagagatcgtcaaagcagggctccactgctccttaagaatatcaaggcatatg 389 Query: 412 ct 413 || Sbjct: 388 ct 387 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 cccatggcgtacttctgggtccag 240 ||||||||||||||||| |||||| Sbjct: 583 cccatggcgtacttctgcgtccag 560
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 ||||| |||||||| || || || |||||||| |||||||||||||| ||||| |||||| Sbjct: 33810 acctttgatatggtaagtgcaggactccactgttccttgaggatgtcgaggcaaatgctg 33869 Query: 415 cc 416 || Sbjct: 33870 cc 33871 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 215 agcccatggcgtacttctgggtccagg 241 ||||||||||||||||||| ||||||| Sbjct: 33589 agcccatggcgtacttctgtgtccagg 33615
>dbj|AB236861.1| Epichloe festucae noxB, ubc1 genes for NADPH oxidase, hypothetical protein, complete cds Length = 8374 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 301 acaaggggatcgtcggggttggggtctgtaagcagggagctgatggagag 350 ||||| || |||||||||||||||||||| |||| ||||| ||||||||| Sbjct: 2708 acaagagggtcgtcggggttggggtctgtgagcatggagcagatggagag 2659 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 405 gcagatgctgccgttggagttgatgtttgggtggta 440 |||||| |||||||||||||||||||| |||||||| Sbjct: 2533 gcagatactgccgttggagttgatgttggggtggta 2498
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 ||||| |||||||| || || || |||||||| |||||||||||||| ||||| |||||| Sbjct: 34122428 acctttgatatggtaagtgcaggactccactgttccttgaggatgtcgaggcaaatgctg 34122487 Query: 415 cc 416 || Sbjct: 34122488 cc 34122489 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 215 agcccatggcgtacttctgggtccagg 241 ||||||||||||||||||| ||||||| Sbjct: 34122207 agcccatggcgtacttctgtgtccagg 34122233
>dbj|AK104783.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D03, full insert sequence Length = 1071 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 ||||| |||||||| || || || |||||||| |||||||||||||| ||||| |||||| Sbjct: 618 acctttgatatggtaagtgcaggactccactgttccttgaggatgtcgaggcaaatgctg 559 Query: 415 cc 416 || Sbjct: 558 cc 557 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 215 agcccatggcgtacttctgggtccagg 241 ||||||||||||||||||| ||||||| Sbjct: 839 agcccatggcgtacttctgtgtccagg 813
>dbj|AK060954.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-G05, full insert sequence Length = 1071 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 ||||| |||||||| || || || |||||||| |||||||||||||| ||||| |||||| Sbjct: 618 acctttgatatggtaagtgcaggactccactgttccttgaggatgtcgaggcaaatgctg 559 Query: 415 cc 416 || Sbjct: 558 cc 557 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 215 agcccatggcgtacttctgggtccagg 241 ||||||||||||||||||| ||||||| Sbjct: 839 agcccatggcgtacttctgtgtccagg 813
>gb|AY104144.1| Zea mays PCO100898 mRNA sequence Length = 831 Score = 60.0 bits (30), Expect = 7e-06 Identities = 90/110 (81%) Strand = Plus / Minus Query: 292 atctccgggacaaggggatcgtcggggttggggtctgtaagcagggagctgatggagagt 351 ||||| |||||||| |||||||| |||||||| || |||||||| |||| ||| || || Sbjct: 501 atctcagggacaagaggatcgtctgggttgggatcagtaagcagcgagcagatagaaagc 442 Query: 352 aggaccttggatatggtcagcgccgggctccactgctccttgaggatgtc 401 | ||||| || || |||| || ||||||||||||||||| || ||||| Sbjct: 441 aaaaccttagagattgtcaaagcagggctccactgctccttaagaatgtc 392
>emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0811B10, complete sequence Length = 99356 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 ||||| |||||||| || || || |||||||| |||||||||||||| ||||| |||||| Sbjct: 39518 acctttgatatggtaagtgcaggactccactgttccttgaggatgtcgaggcaaatgctg 39577 Query: 415 cc 416 || Sbjct: 39578 cc 39579 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 215 agcccatggcgtacttctgggtccagg 241 ||||||||||||||||||| ||||||| Sbjct: 39297 agcccatggcgtacttctgtgtccagg 39323
>ref|XM_655273.1| Aspergillus nidulans FGSC A4 ubiquitin-conjugating enzyme E2-16 kDa (AN2761.2), mRNA Length = 444 Score = 58.0 bits (29), Expect = 3e-05 Identities = 101/125 (80%) Strand = Plus / Minus Query: 316 gggttggggtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgcc 375 |||||||| ||||| |||| ||||| || ||||| || || ||||| || |||| || Sbjct: 344 gggttgggatctgtgagcatggagcatatcgagagcagcactttggagattgtcaaggct 285 Query: 376 gggctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttggg 435 || |||||||| || ||| ||||| |||||||| |||||||||||||||||||| || Sbjct: 284 ggactccactggtctcggagaatgtcaaggcagatactgccgttggagttgatgttcgga 225 Query: 436 tggta 440 ||||| Sbjct: 224 tggta 220
>gb|AY486137.1| Capsicum annuum ubiquitin-conjugating protein mRNA, complete cds Length = 578 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 307 ggatcgtcggggttggggtctgtaagcagggagctgatggagagtaggaccttggatatg 366 ||||| |||||||| ||||| || | ||| |||| |||||| || |||||||| |||||| Sbjct: 285 ggatcatcggggtttgggtccgtcaacagagagcagatggacagcaggaccttcgatatg 226 Query: 367 gtcagcgccgggctccactgctccttgag 395 || | || || ||||||||||||||||| Sbjct: 225 gttaatgctggactccactgctccttgag 197
>ref|NM_179131.1| Arabidopsis thaliana UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT4G27960 (UBC9) transcript variant AT4G27960.1 mRNA, complete cds Length = 686 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 379 ctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtgg 438 |||||||||||||| | |||||| ||||||||||| || ||| ||| |||||||| ||| Sbjct: 360 ctccactgctccttcaagatgtcgaggcagatgcttccattgctgttaatgtttggatgg 301 Query: 439 tacacctt 446 ||||||| Sbjct: 300 aacacctt 293 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 213 tcagcccatggcgtacttctgggtccagg 241 |||||||||||| ||||| |||||||||| Sbjct: 526 tcagcccatggcatacttttgggtccagg 498
>ref|NM_118934.1| Arabidopsis thaliana UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT4G27960 (UBC9) transcript variant AT4G27960.2 mRNA, complete cds Length = 896 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 379 ctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtgg 438 |||||||||||||| | |||||| ||||||||||| || ||| ||| |||||||| ||| Sbjct: 498 ctccactgctccttcaagatgtcgaggcagatgcttccattgctgttaatgtttggatgg 439 Query: 439 tacacctt 446 ||||||| Sbjct: 438 aacacctt 431 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 213 tcagcccatggcgtacttctgggtccagg 241 |||||||||||| ||||| |||||||||| Sbjct: 664 tcagcccatggcatacttttgggtccagg 636
>ref|XM_464900.1| Oryza sativa (japonica cultivar-group), mRNA Length = 728 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 346 gagagtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccagg 405 |||||||| ||||| || || |||| || || |||||||||||||| | ||| || ||| Sbjct: 349 gagagtagcacctttgaaatagtcaatgcaggactccactgctccttcaagatatcaagg 290 Query: 406 cagatgctgccgttggagttgatgtttgggtggtacacctttgt 449 || ||||| |||||| || |||||||||||| |||||||||| Sbjct: 289 catatgcttccgttgctattaatgtttgggtggaacacctttgt 246
>gb|AF424641.1| Phytophthora infestans clone MY-03-C-08 ubiquitin-conjugating enzyme mRNA, complete cds Length = 691 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 316 gggttggggtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgcc 375 ||||||| ||| || ||||| |||| ||| || || || ||||| || || |||| ||| Sbjct: 388 gggttggcgtccgtgagcagtgagcagatcgacagcagcaccttcgagatagtcaacgca 329 Query: 376 gggctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtt 431 ||||||||||| || || | ||| ||||||||||||| |||||||| |||||||| Sbjct: 328 gggctccactgatcttttaagatatccaggcagatgccgccgttggcattgatgtt 273
>gb|AY142644.1| Arabidopsis thaliana E2 ubiquitin-conjugating enzyme 9 (UBC9) (At4g27960) mRNA, complete cds Length = 478 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 379 ctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtgg 438 |||||||||||||| | |||||| ||||||||||| || ||| ||| |||||||| ||| Sbjct: 281 ctccactgctccttcaagatgtcgaggcagatgcttccattgctgttaatgtttggatgg 222 Query: 439 tacacctt 446 ||||||| Sbjct: 221 aacacctt 214 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 213 tcagcccatggcgtacttctgggtccagg 241 |||||||||||| ||||| |||||||||| Sbjct: 447 tcagcccatggcatacttttgggtccagg 419
>emb|Z14990.1|ATUBC9 A.thaliana UBC9 mRNA for ubiquitin conjugating enzyme homolog Length = 687 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 379 ctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtgg 438 |||||||||||||| | |||||| ||||||||||| || ||| ||| |||||||| ||| Sbjct: 331 ctccactgctccttcaagatgtcgaggcagatgcttccattgctgttaatgtttggatgg 272 Query: 439 tacacctt 446 ||||||| Sbjct: 271 aacacctt 264 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 213 tcagcccatggcgtacttctgggtccagg 241 |||||||||||| ||||| |||||||||| Sbjct: 497 tcagcccatggcatacttttgggtccagg 469
>gb|AY080741.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC9 (At4g27960) mRNA, complete cds Length = 688 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 379 ctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtgg 438 |||||||||||||| | |||||| ||||||||||| || ||| ||| |||||||| ||| Sbjct: 357 ctccactgctccttcaagatgtcgaggcagatgcttccattgctgttaatgtttggatgg 298 Query: 439 tacacctt 446 ||||||| Sbjct: 297 aacacctt 290 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 213 tcagcccatggcgtacttctgggtccagg 241 |||||||||||| ||||| |||||||||| Sbjct: 523 tcagcccatggcatacttttgggtccagg 495
>emb|X72626.1|ATUCEE2B A.thaliana UbcAT4b mRNA for ubiquitin conjugating enzyme E2 Length = 643 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 379 ctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtgg 438 |||||||||||||| | |||||| ||||||||||| || ||| ||| |||||||| ||| Sbjct: 315 ctccactgctccttcaagatgtcgaggcagatgcttccattgctgttaatgtttggatgg 256 Query: 439 tacacctt 446 ||||||| Sbjct: 255 aacacctt 248 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 213 tcagcccatggcgtacttctgggtccagg 241 |||||||||||| ||||| |||||||||| Sbjct: 481 tcagcccatggcatacttttgggtccagg 453
>emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 68 Length = 199749 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 379 ctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtgg 438 |||||||||||||| | |||||| ||||||||||| || ||| ||| |||||||| ||| Sbjct: 31807 ctccactgctccttcaagatgtcgaggcagatgcttccattgctgttaatgtttggatgg 31866 Query: 439 tacacctt 446 ||||||| Sbjct: 31867 aacacctt 31874 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 213 tcagcccatggcgtacttctgggtccagg 241 |||||||||||| ||||| |||||||||| Sbjct: 31548 tcagcccatggcatacttttgggtccagg 31576
>emb|AL035524.1|ATT13J8 Arabidopsis thaliana DNA chromosome 4, BAC clone T13J8 (ESSAII project) Length = 83693 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 379 ctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtgg 438 |||||||||||||| | |||||| ||||||||||| || ||| ||| |||||||| ||| Sbjct: 26671 ctccactgctccttcaagatgtcgaggcagatgcttccattgctgttaatgtttggatgg 26730 Query: 439 tacacctt 446 ||||||| Sbjct: 26731 aacacctt 26738 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 213 tcagcccatggcgtacttctgggtccagg 241 |||||||||||| ||||| |||||||||| Sbjct: 26412 tcagcccatggcatacttttgggtccagg 26440
>gb|AF325019.2|AF325019 Arabidopsis thaliana AT4g27960 (AT4g27960/T13J8_70) mRNA, complete cds Length = 896 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 379 ctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtgg 438 |||||||||||||| | |||||| ||||||||||| || ||| ||| |||||||| ||| Sbjct: 498 ctccactgctccttcaagatgtcgaggcagatgcttccattgctgttaatgtttggatgg 439 Query: 439 tacacctt 446 ||||||| Sbjct: 438 aacacctt 431 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 213 tcagcccatggcgtacttctgggtccagg 241 |||||||||||| ||||| |||||||||| Sbjct: 664 tcagcccatggcatacttttgggtccagg 636
>emb|AL115009.1|CNS01C2X Botrytis cinerea strain T4 cDNA library Length = 686 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 406 cagatgctgccgttggagttgatgtttgggtg 437 |||||||| ||||||||||||||||||||||| Sbjct: 268 cagatgcttccgttggagttgatgtttgggtg 237
>emb|AL111648.1|CNS019HK Botrytis cinerea strain T4 cDNA library Length = 636 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 406 cagatgctgccgttggagttgatgtttgggtg 437 |||||||| ||||||||||||||||||||||| Sbjct: 244 cagatgcttccgttggagttgatgtttgggtg 213
>gb|AF001948.1|AF001948 Pinus resinosa putative ubiquitin conjugating enzyme mRNA, complete cds Length = 632 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 379 ctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtgg 438 |||||||||||||| |||||||| || |||||||| ||||| ||||| | ||||| ||| Sbjct: 281 ctccactgctccttcaggatgtcaagacagatgctaccgttagagttcacatttggatgg 222 Query: 439 tacacctt 446 || ||||| Sbjct: 221 taaacctt 214
>dbj|AK121248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101B08, full insert sequence Length = 729 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 346 gagagtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccagg 405 |||||||| ||||| || || |||| || || |||||||||||||| | ||| || ||| Sbjct: 349 gagagtagcacctttgaaatagtcaatgcaggactccactgctccttcaagatatcaagg 290 Query: 406 cagatgctgccgttggagttgatgtttgggtggtacacctttgt 449 || ||||| |||||| || |||||||||||| |||||||||| Sbjct: 289 catatgcttccgttgctattaatgtttgggtggaacacctttgt 246
>gb|DQ027023.1| Arabidopsis thaliana ubiquitinating enzyme (At4g27960) mRNA, complete cds Length = 537 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 379 ctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtgg 438 |||||||||||||| | |||||| ||||||||||| || ||| ||| |||||||| ||| Sbjct: 371 ctccactgctccttcaagatgtcgaggcagatgcttccattgctgttaatgtttggatgg 312 Query: 439 tacacctt 446 ||||||| Sbjct: 311 aacacctt 304 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 213 tcagcccatggcgtacttctgggtccagg 241 |||||||||||| ||||| |||||||||| Sbjct: 537 tcagcccatggcatacttttgggtccagg 509
>gb|L00639.1|ATHUBCB Arabidopsis thaliana ubiquitin conjugating enzyme mRNA, complete cds Length = 658 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 379 ctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtgg 438 |||||||||||||| | |||||| ||||||||||| || ||| ||| |||||||| ||| Sbjct: 331 ctccactgctccttcaagatgtcgaggcagatgcttccattgctgttaatgtttggatgg 272 Query: 439 tacacctt 446 ||||||| Sbjct: 271 aacacctt 264 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 213 tcagcccatggcgtacttctgggtccagg 241 |||||||||||| ||||| |||||||||| Sbjct: 497 tcagcccatggcatacttttgggtccagg 469
>dbj|AB074412.1| Oryza sativa (japonica cultivar-group) mRNA for ubiquitin-conjugating enzyme OsUBC5b, complete cds Length = 574 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 346 gagagtaggaccttggatatggtcagcgccgggctccactgctccttgaggatgtccagg 405 |||||||| ||||| || || |||| || || |||||||||||||| | ||| || ||| Sbjct: 345 gagagtagcacctttgaaatagtcaatgcaggactccactgctccttcaagatatcaagg 286 Query: 406 cagatgctgccgttggagttgatgtttgggtggtacacctttgt 449 || ||||| |||||| || |||||||||||| |||||||||| Sbjct: 285 catatgcttccgttgctattaatgtttgggtggaacacctttgt 242
>ref|NM_111704.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT3G08700 mRNA, complete cds Length = 450 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 397 atgtccaggcagatgctgccgttggagttgatgtttgggtggtacacctttgtttggaaa 456 ||||| ||||| ||||| || ||| || ||||||||||||||||||||| || | |||| Sbjct: 266 atgtcaaggcaaatgcttcctttgctgtcgatgtttgggtggtacaccttagtcttgaaa 207 Query: 457 ttcacttttgg 467 ||||| ||||| Sbjct: 206 ttcacctttgg 196
>gb|BC076483.1| Danio rerio zgc:92467, mRNA (cDNA clone MGC:92467 IMAGE:7043653), complete cds Length = 1420 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 324 gtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctcca 383 |||||| || || |||| |||||| || || ||||||||||||||||| || || ||||| Sbjct: 540 gtctgtgagtagagagcagatggacagcagcaccttggatatggtcagagcaggactcca 481 Query: 384 ctgctccttgaggatgtccaggcagat 410 | ||||| ||||||||||| ||||| Sbjct: 480 gttgtccttcaggatgtccagacagat 454
>ref|NM_001003494.1| Danio rerio zgc:92467 (zgc:92467), mRNA Length = 1420 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 324 gtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctcca 383 |||||| || || |||| |||||| || || ||||||||||||||||| || || ||||| Sbjct: 540 gtctgtgagtagagagcagatggacagcagcaccttggatatggtcagagcaggactcca 481 Query: 384 ctgctccttgaggatgtccaggcagat 410 | ||||| ||||||||||| ||||| Sbjct: 480 gttgtccttcaggatgtccagacagat 454
>dbj|AK157092.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830201E13 product:unclassifiable, full insert sequence Length = 3085 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 324 gtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctcca 383 ||||||| | || |||| |||||| || ||||| || || |||||||| ||||| ||||| Sbjct: 1793 gtctgtaggtagtgagcagatggacaggaggactttagagatggtcagggccggactcca 1852 Query: 384 ctgctccttgaggatgtccaggcagat 410 | ||||||||||||||||| ||||| Sbjct: 1853 gttgtccttgaggatgtccagacagat 1879
>gb|BT024821.1| Arabidopsis thaliana At3g08700 gene, complete cds Length = 450 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 397 atgtccaggcagatgctgccgttggagttgatgtttgggtggtacacctttgtttggaaa 456 ||||| ||||| ||||| || ||| || ||||||||||||||||||||| || | |||| Sbjct: 266 atgtcaaggcaaatgcttcctttgctgtcgatgtttgggtggtacaccttagtcttgaaa 207 Query: 457 ttcacttttgg 467 ||||| ||||| Sbjct: 206 ttcacctttgg 196
>gb|AF154650.1| Nicotiana tabacum clone PR35 mRNA sequence Length = 671 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 ||||||||||| || || || ||||||||||| ||||| | ||||| ||||| ||||| Sbjct: 332 accttggatattgtgagtgcggggctccactgttccttcaaaatgtcgaggcaaatgcta 273 Query: 415 ccgttggagttgatgtttgggtg 437 || ||| ||||||||||||||| Sbjct: 272 ccattgctgttgatgtttgggtg 250
>dbj|AP005777.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0026F09 Length = 124371 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 379 ctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtgg 438 |||||||||||||| | ||| || ||||| ||||| |||||| || |||||||||||| Sbjct: 20382 ctccactgctccttcaagatatcaaggcatatgcttccgttgctattaatgtttgggtgg 20323 Query: 439 tacacctttgt 449 |||||||||| Sbjct: 20322 aacacctttgt 20312
>gb|DQ027026.1| Arabidopsis thaliana ubiquitinating enzyme (At3g08700) mRNA, complete cds Length = 450 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 397 atgtccaggcagatgctgccgttggagttgatgtttgggtggtacacctttgtttggaaa 456 ||||| ||||| ||||| || ||| || ||||||||||||||||||||| || | |||| Sbjct: 266 atgtcaaggcaaatgcttcctttgctgtcgatgtttgggtggtacaccttagtcttgaaa 207 Query: 457 ttcacttttgg 467 ||||| ||||| Sbjct: 206 ttcacctttgg 196
>ref|XM_838144.1| Leishmania major strain Friedlin ubiquitin-conjugating enzyme E2 (LMJ_1061) partial mRNA Length = 447 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 367 gtcagcgccgggctccactgctccttgaggatgtccaggcagatgctgccgttggagttg 426 ||||||||||| |||||| |||||||| || || |||||||||| ||||||| ||| Sbjct: 296 gtcagcgccggtgaccactggtccttgagaatatcaaggcagatgccgccgttgttgttt 237 Query: 427 atgtttgggtggta 440 ||||| |||||||| Sbjct: 236 atgttcgggtggta 223
>emb|AL445678.2|LMFL7845 Leishmania major Friedlin chromosome 35 cosmid L7845 Length = 29811 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 367 gtcagcgccgggctccactgctccttgaggatgtccaggcagatgctgccgttggagttg 426 ||||||||||| |||||| |||||||| || || |||||||||| ||||||| ||| Sbjct: 17994 gtcagcgccggtgaccactggtccttgagaatatcaaggcagatgccgccgttgttgttt 18053 Query: 427 atgtttgggtggta 440 ||||| |||||||| Sbjct: 18054 atgttcgggtggta 18067
>gb|AF532622.1| Glycine max ubiquitin-conjugation enzyme gene, complete cds Length = 929 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 212 atcagcccatggcgtacttctgggtccag 240 ||||||||||||| ||||||||||||||| Sbjct: 631 atcagcccatggcatacttctgggtccag 603
>ref|NM_026785.1| Mus musculus ubiquitin-conjugating enzyme E2C (Ube2c), mRNA Length = 932 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 388 tccttgaggatgtccaggcagatgctgcc 416 |||||||||||||||||||||||| |||| Sbjct: 411 tccttgaggatgtccaggcagatgttgcc 383
>ref|XR_003047.1| PREDICTED: Mus musculus similar to microtubule-associated protein 7 (LOC670612), mRNA Length = 1284 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 388 tccttgaggatgtccaggcagatgctgcc 416 |||||||||||||||||||||||| |||| Sbjct: 486 tccttgaggatgtccaggcagatgttgcc 458
>ref|XR_002255.1| PREDICTED: Mus musculus similar to microtubule-associated protein 7 (LOC668805), mRNA Length = 1284 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 388 tccttgaggatgtccaggcagatgctgcc 416 |||||||||||||||||||||||| |||| Sbjct: 486 tccttgaggatgtccaggcagatgttgcc 458
>gb|BC085107.1| Mus musculus cDNA clone IMAGE:30468972, **** WARNING: chimeric clone **** Length = 2181 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 388 tccttgaggatgtccaggcagatgctgcc 416 |||||||||||||||||||||||| |||| Sbjct: 413 tccttgaggatgtccaggcagatgttgcc 385
>gb|AC068909.31| Mus musculus BAC Clone 407f20 RPCI-23, complete sequence Length = 196383 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 388 tccttgaggatgtccaggcagatgctgcc 416 |||||||||||||||||||||||| |||| Sbjct: 124694 tccttgaggatgtccaggcagatgttgcc 124722
>gb|AC151284.3| Mus musculus BAC clone RP23-391C14 from chromosome 17, complete sequence Length = 202363 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 388 tccttgaggatgtccaggcagatgctgcc 416 |||||||||||||||||||||||| |||| Sbjct: 18761 tccttgaggatgtccaggcagatgttgcc 18789
>dbj|AK136186.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420472K05 product:ubiquitin-conjugating enzyme E2C, full insert sequence Length = 657 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 388 tccttgaggatgtccaggcagatgctgcc 416 |||||||||||||||||||||||| |||| Sbjct: 411 tccttgaggatgtccaggcagatgttgcc 383
>dbj|AK160740.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110002M17 product:ubiquitin-conjugating enzyme E2C, full insert sequence Length = 932 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 388 tccttgaggatgtccaggcagatgctgcc 416 |||||||||||||||||||||||| |||| Sbjct: 442 tccttgaggatgtccaggcagatgttgcc 414
>dbj|AK003722.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110015A16 product:ubiquitin-conjugating enzyme E2C, full insert sequence Length = 932 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 388 tccttgaggatgtccaggcagatgctgcc 416 |||||||||||||||||||||||| |||| Sbjct: 411 tccttgaggatgtccaggcagatgttgcc 383
>dbj|AK090188.1| Mus musculus 14 days embryo lung cDNA, RIKEN full-length enriched library, clone:G630014K06 product:unclassifiable, full insert sequence Length = 2151 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 388 tccttgaggatgtccaggcagatgctgcc 416 |||||||||||||||||||||||| |||| Sbjct: 1599 tccttgaggatgtccaggcagatgttgcc 1627
>gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BAC F17O14 genomic sequence, complete sequence Length = 90721 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Minus Query: 397 atgtccaggcagatgctgccgttggagttgatgtttgggtggtacacctttgtttggaaa 456 ||||| ||||| ||||| || ||| || ||||||||||||||||||||| || | |||| Sbjct: 55170 atgtcaaggcaaatgcttcctttgctgtcgatgtttgggtggtacaccttagtcttgaaa 55111 Query: 457 ttcac 461 ||||| Sbjct: 55110 ttcac 55106
>ref|XM_573359.1| PREDICTED: Rattus norvegicus similar to ubiquitin-conjugating enzyme E2C isoform 3 (LOC363877), mRNA Length = 494 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 388 tccttgaggatgtccaggcagatgctgcc 416 |||||||||||||||||||||||| |||| Sbjct: 274 tccttgaggatgtccaggcagatgttgcc 246
>ref|XM_215924.2| PREDICTED: Rattus norvegicus ubiquitin-conjugating enzyme E2C (predicted) (Ube2c_predicted), mRNA Length = 725 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 388 tccttgaggatgtccaggcagatgctgcc 416 |||||||||||||||||||||||| |||| Sbjct: 377 tccttgaggatgtccaggcagatgttgcc 349
>gb|AC151264.2| Mus musculus BAC clone RP24-347M6 from 17, complete sequence Length = 153677 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 388 tccttgaggatgtccaggcagatgctgcc 416 |||||||||||||||||||||||| |||| Sbjct: 92919 tccttgaggatgtccaggcagatgttgcc 92947
>gb|AF161722.1|AF161722 Magnaporthe grisea ubiquitin-conjugating protein (Ubc1) gene, complete cds Length = 2239 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 310 tcgtcggggttggggtctgtaagcagggagctgatggagag 350 ||||||||||||||||| ||||||| |||| ||||||||| Sbjct: 1253 tcgtcggggttggggtcggtaagcatagagcagatggagag 1213 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Minus Query: 397 atgtccaggcagatgctgccgttggagttgatgtttgggtggta 440 ||||| |||||||||||||||||| |||||| || |||||||| Sbjct: 1063 atgtcgaggcagatgctgccgttgctgttgatattcgggtggta 1020
>emb|AL591127.12| Mouse DNA sequence from clone RP23-370H21 on chromosome 2, complete sequence Length = 125816 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 388 tccttgaggatgtccaggcagatgctgcc 416 |||||||||||||||||||||||| |||| Sbjct: 90088 tccttgaggatgtccaggcagatgttgcc 90060
>emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 262797 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 379 ctccactgctccttgaggatgtccaggcagatg 411 |||||||| ||||| |||||||||||||||||| Sbjct: 129955 ctccactggtccttcaggatgtccaggcagatg 129923
>gb|AC068908.21| Mus musculus BAC Clone 389o18 RPCI-23, complete sequence Length = 198576 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 388 tccttgaggatgtccaggcagatgctgcc 416 |||||||||||||||||||||||| |||| Sbjct: 57319 tccttgaggatgtccaggcagatgttgcc 57347
>dbj|AP004929.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT06J16, TM0083, complete sequence Length = 120016 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggca 407 ||||||||||| || || |||||||||||||| || ||||| ||||| ||||| Sbjct: 111466 accttggatattgtgagggccgggctccactggtctttgagaatgtcaaggca 111414
>ref|NM_124997.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G56150 transcript variant AT5G56150.2 mRNA, complete cds Length = 744 Score = 48.1 bits (24), Expect = 0.026 Identities = 75/92 (81%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||||| ||| || || |||||||||||||| || || ||||| || ||||| || Sbjct: 383 accttggatacggtaagtgcagggctccactgctctttcagaatgtcaagacagatactt 324 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 || || ||||||||||||||| || ||||| Sbjct: 323 ccattactgttgatgtttgggtgataaacctt 292
>ref|NM_180867.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G56150 transcript variant AT5G56150.1 mRNA, complete cds Length = 751 Score = 48.1 bits (24), Expect = 0.026 Identities = 75/92 (81%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||||| ||| || || |||||||||||||| || || ||||| || ||||| || Sbjct: 390 accttggatacggtaagtgcagggctccactgctctttcagaatgtcaagacagatactt 331 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 || || ||||||||||||||| || ||||| Sbjct: 330 ccattactgttgatgtttgggtgataaacctt 299
>gb|AY389716.1| Hyacinthus orientalis ubiquitin-conjugating enzyme 9 mRNA, partial cds Length = 650 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 217 cccatggcgtacttctgggtccag 240 |||||||||||||||||||||||| Sbjct: 420 cccatggcgtacttctgggtccag 397
>emb|X92663.1|DMUBCD2 D.melanogaster mRNA for ubiquitin-conjugating enzyme UbcD2 Length = 1222 Score = 48.1 bits (24), Expect = 0.026 Identities = 69/84 (82%) Strand = Plus / Minus Query: 324 gtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctcca 383 |||||| |||||||||| || || || | |||||| ||||||||||||||||| ||| Sbjct: 882 gtctgtgagcagggagcaaattgacagcaagacctttgatatggtcagcgccggcgacca 823 Query: 384 ctgctccttgaggatgtccaggca 407 | |||||||| ||||||||||| Sbjct: 822 gttgtccttgagtatgtccaggca 799
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 397 atgtccaggcagatgctgccgttggagttgatgtttgggtggta 440 |||||||| ||||| ||||| || ||||||||||| |||||||| Sbjct: 204568 atgtccagacagatactgccatttgagttgatgttggggtggta 204611 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 310 tcgtcggggttggggtctgtaagca 334 ||||| ||||||||||||||||||| Sbjct: 204426 tcgtctgggttggggtctgtaagca 204450
>ref|NM_164943.1| Drosophila melanogaster Ubiquitin conjugating enzyme 2 CG6720-RB, transcript variant B (UbcD2), mRNA Length = 1350 Score = 48.1 bits (24), Expect = 0.026 Identities = 69/84 (82%) Strand = Plus / Minus Query: 324 gtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctcca 383 |||||| |||||||||| || || || | |||||| ||||||||||||||||| ||| Sbjct: 686 gtctgtgagcagggagcaaattgacagcaagacctttgatatggtcagcgccggcgacca 627 Query: 384 ctgctccttgaggatgtccaggca 407 | |||||||| ||||||||||| Sbjct: 626 gttgtccttgagtatgtccaggca 603
>gb|AY094899.1| Drosophila melanogaster RE74673 full insert cDNA Length = 1644 Score = 48.1 bits (24), Expect = 0.026 Identities = 69/84 (82%) Strand = Plus / Minus Query: 324 gtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctcca 383 |||||| |||||||||| || || || | |||||| ||||||||||||||||| ||| Sbjct: 962 gtctgtgagcagggagcaaattgacagcaagacctttgatatggtcagcgccggcgacca 903 Query: 384 ctgctccttgaggatgtccaggca 407 | |||||||| ||||||||||| Sbjct: 902 gttgtccttgagtatgtccaggca 879
>gb|AY081511.1| Arabidopsis thaliana ubiquitin-conjugating enzyme-like protein (MDA7.21) mRNA, complete cds Length = 479 Score = 48.1 bits (24), Expect = 0.026 Identities = 75/92 (81%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||||| ||| || || |||||||||||||| || || ||||| || ||||| || Sbjct: 305 accttggatacggtaagtgcagggctccactgctctttcagaatgtcaagacagatactt 246 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 || || ||||||||||||||| || ||||| Sbjct: 245 ccattactgttgatgtttgggtgataaacctt 214
>ref|NM_057789.3| Drosophila melanogaster Ubiquitin conjugating enzyme 2 CG6720-RA, transcript variant A (UbcD2), mRNA Length = 1625 Score = 48.1 bits (24), Expect = 0.026 Identities = 69/84 (82%) Strand = Plus / Minus Query: 324 gtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctcca 383 |||||| |||||||||| || || || | |||||| ||||||||||||||||| ||| Sbjct: 961 gtctgtgagcagggagcaaattgacagcaagacctttgatatggtcagcgccggcgacca 902 Query: 384 ctgctccttgaggatgtccaggca 407 | |||||||| ||||||||||| Sbjct: 901 gttgtccttgagtatgtccaggca 878
>gb|DQ118120.1|DQ118119S2 Lupinus albus ubiquitin conjugating enzyme E2 mRNA, partial cds Length = 202 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 213 tcagcccatggcgtacttctgggtccag 240 |||||||||||| ||||||||||||||| Sbjct: 61 tcagcccatggcatacttctgggtccag 34
>gb|AY059806.1| Arabidopsis thaliana ubiquitin-conjugating enzyme-like protein (MDA7.21) mRNA, complete cds Length = 717 Score = 48.1 bits (24), Expect = 0.026 Identities = 75/92 (81%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||||| ||| || || |||||||||||||| || || ||||| || ||||| || Sbjct: 384 accttggatacggtaagtgcagggctccactgctctttcagaatgtcaagacagatactt 325 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 || || ||||||||||||||| || ||||| Sbjct: 324 ccattactgttgatgtttgggtgataaacctt 293
>gb|AC007147.8|AC007147 Drosophila melanogaster, chromosome 2L, region 32A-, BAC clone BACR19N18, complete sequence Length = 196248 Score = 48.1 bits (24), Expect = 0.026 Identities = 69/84 (82%) Strand = Plus / Minus Query: 324 gtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctcca 383 |||||| |||||||||| || || || | |||||| ||||||||||||||||| ||| Sbjct: 151283 gtctgtgagcagggagcaaattgacagcaagacctttgatatggtcagcgccggcgacca 151224 Query: 384 ctgctccttgaggatgtccaggca 407 | |||||||| ||||||||||| Sbjct: 151223 gttgtccttgagtatgtccaggca 151200
>emb|BX833149.1|CNS09Z3U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL36ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 707 Score = 48.1 bits (24), Expect = 0.026 Identities = 75/92 (81%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||||| ||| || || |||||||||||||| || || ||||| || ||||| || Sbjct: 373 accttggatacggtaagtgcagggctccactgctctttcagaatgtcaagacagatactt 314 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 || || ||||||||||||||| || ||||| Sbjct: 313 ccattactgttgatgtttgggtgataaacctt 282
>gb|AY084220.1| Arabidopsis thaliana clone 10022 mRNA, complete sequence Length = 750 Score = 48.1 bits (24), Expect = 0.026 Identities = 75/92 (81%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||||| ||| || || |||||||||||||| || || ||||| || ||||| || Sbjct: 390 accttggatacggtaagtgcagggctccactgctctttcagaatgtcaagacagatactt 331 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 || || ||||||||||||||| || ||||| Sbjct: 330 ccattactgttgatgtttgggtgataaacctt 299
>dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDA7 Length = 82033 Score = 48.1 bits (24), Expect = 0.026 Identities = 75/92 (81%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||||| ||| || || |||||||||||||| || || ||||| || ||||| || Sbjct: 64690 accttggatacggtaagtgcagggctccactgctctttcagaatgtcaagacagatactt 64631 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 || || ||||||||||||||| || ||||| Sbjct: 64630 ccattactgttgatgtttgggtgataaacctt 64599
>emb|Z14993.1|ATUBC12 A.thaliana UBC12 gene Length = 1010 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Minus Query: 379 ctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtgg 438 |||||||||||||| | |||||| ||||| ||||| |||||| ||| ||||| || ||| Sbjct: 755 ctccactgctccttcaagatgtcgaggcaaatgctaccgttgctgttaatgttgggatgg 696 Query: 439 tacacctt 446 ||||||| Sbjct: 695 aacacctt 688
>gb|AE003629.2| Drosophila melanogaster chromosome 2L, section 38 of 83 of the complete sequence Length = 261176 Score = 48.1 bits (24), Expect = 0.026 Identities = 69/84 (82%) Strand = Plus / Plus Query: 324 gtctgtaagcagggagctgatggagagtaggaccttggatatggtcagcgccgggctcca 383 |||||| |||||||||| || || || | |||||| ||||||||||||||||| ||| Sbjct: 259474 gtctgtgagcagggagcaaattgacagcaagacctttgatatggtcagcgccggcgacca 259533 Query: 384 ctgctccttgaggatgtccaggca 407 | |||||||| ||||||||||| Sbjct: 259534 gttgtccttgagtatgtccaggca 259557
>gb|DQ027043.1| Arabidopsis thaliana ubiquitinating enzyme (At5g56150) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.026 Identities = 75/92 (81%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 |||||||||| ||| || || |||||||||||||| || || ||||| || ||||| || Sbjct: 305 accttggatacggtaagtgcagggctccactgctctttcagaatgtcaagacagatactt 246 Query: 415 ccgttggagttgatgtttgggtggtacacctt 446 || || ||||||||||||||| || ||||| Sbjct: 245 ccattactgttgatgtttgggtgataaacctt 214
>gb|L00642.1|ATHUBCE Arabidopsis thaliana ubiquitin conjugating enzyme gene, exons 1-4 Length = 1010 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Minus Query: 379 ctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttgggtgg 438 |||||||||||||| | |||||| ||||| ||||| |||||| ||| ||||| || ||| Sbjct: 755 ctccactgctccttcaagatgtcgaggcaaatgctaccgttgctgttaatgttgggatgg 696 Query: 439 tacacctt 446 ||||||| Sbjct: 695 aacacctt 688
>ref|XM_749910.1| Aspergillus fumigatus Af293 ubiquitin conjugating enzyme UbcD (Afu3g06030) partial mRNA Length = 444 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 394 aggatgtccaggcagatgctgccgttggagttgatgtttgggtggta 440 |||||||| || ||||| ||||| || ||||||||||| |||||||| Sbjct: 266 aggatgtcaagacagatactgccattcgagttgatgttggggtggta 220
>gb|AC149067.3| Mus musculus BAC clone RP23-56C20 from chromosome 7, complete sequence Length = 267610 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 390 cttgaggatgtccaggcagatgctgcc 416 ||||||||||||||| ||||||||||| Sbjct: 143792 cttgaggatgtccagtcagatgctgcc 143766
>dbj|AP003446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1529_G03 Length = 100635 Score = 46.1 bits (23), Expect = 0.10 Identities = 77/95 (81%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggatgtccaggcagatgctg 414 ||||| ||||| |||| || ||||||||||| ||||| || ||||| ||||| ||||| Sbjct: 41495 accttagatattgtcaaagcagggctccactgttccttaagaatgtcgaggcatatgctt 41436 Query: 415 ccgttggagttgatgtttgggtggtacacctttgt 449 || ||| ||||||||||| ||| | |||||||| Sbjct: 41435 ccattgctattgatgtttggatggaagacctttgt 41401 Score = 44.1 bits (22), Expect = 0.41 Identities = 61/74 (82%) Strand = Plus / Minus Query: 376 gggctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatgtttggg 435 |||||||| |||||||| || ||||| ||||| ||||| || ||| ||||||||||| Sbjct: 62966 gggctccattgctccttaagaatgtcaaggcatatgcttccattgctattgatgtttgga 62907 Query: 436 tggtacacctttgt 449 ||| | |||||||| Sbjct: 62906 tggaagacctttgt 62893 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 212 atcagcccatggcgtacttctgggtccag 240 |||| |||||||| ||||||||||||||| Sbjct: 64216 atcatcccatggcatacttctgggtccag 64188 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 292 atctccgggacaaggggatcgtcggggttggggtctgtaagcagggagc 340 ||||| |||||||| || ||||| ||||||||||| || ||||| |||| Sbjct: 64136 atctcagggacaagagggtcgtccgggttggggtcagtgagcagcgagc 64088 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 292 atctccgggacaaggggatcgtcggggttggggtctgtaagcagggagc 340 ||||| |||||||| || ||||| ||||||||||| || ||||| |||| Sbjct: 41953 atctcagggacaagagggtcgtccgggttggggtcagtgagcagcgagc 41905 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 cccatggcgtacttctgggtccag 240 |||||||| ||||||||||||||| Sbjct: 42028 cccatggcatacttctgggtccag 42005
>gb|AC159405.1| Trypanosoma brucei chromosome 8 clone RPCI93-11J15, complete sequence Length = 164873 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 378 gctccactgctccttgaggatgtccaggca 407 |||||||| ||||||||||||||| ||||| Sbjct: 92540 gctccacttctccttgaggatgtcgaggca 92569
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 378 gctccactgctccttgaggatgtccaggca 407 |||||||| ||||||||||||||| ||||| Sbjct: 1778650 gctccacttctccttgaggatgtcgaggca 1778621
>ref|XM_589208.2| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2D 4 (putative) (LOC511801), mRNA Length = 621 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 394 aggatgtccaggcagatgctgccgttggagttgatgtt 431 |||||||| |||||||||||||| ||| ||||||||| Sbjct: 350 aggatgtcaaggcagatgctgccattgctgttgatgtt 313
>ref|XM_818403.1| Trypanosoma brucei TREU927 clone RPCI93-11J15 ubiquitin-conjugating enzyme E2 (Tb927.8.6090) partial mRNA Length = 468 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 378 gctccactgctccttgaggatgtccaggca 407 |||||||| ||||||||||||||| ||||| Sbjct: 300 gctccacttctccttgaggatgtcgaggca 271
>ref|XM_505047.1| Yarrowia lipolytica CLIB122, YALI0F05764g predicted mRNA Length = 537 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 388 tccttgaggatgtccaggcagatgctgccg 417 |||||||| ||||||||||||||| ||||| Sbjct: 362 tccttgagaatgtccaggcagatgttgccg 333
>dbj|AB226249.1| Aspergillus oryzae cDNA, contig sequence: AoEST3108 Length = 1024 Score = 44.1 bits (22), Expect = 0.41 Identities = 97/122 (79%) Strand = Plus / Minus Query: 310 tcgtcggggttggggtctgtaagcagggagctgatggagagtaggaccttggatatggtc 369 ||||| ||||||||||||||||||| || | |||||| || || || || || || || Sbjct: 512 tcgtctgggttggggtctgtaagcatcgaacagatggacagcagcactttagagattgtg 453 Query: 370 agcgccgggctccactgctccttgaggatgtccaggcagatgctgccgttggagttgatg 429 || || |||||||| || || | || |||||||| ||||| ||||| || ||||||||| Sbjct: 452 agagcagggctccattggtctctaagaatgtccagacagatactgccatttgagttgatg 393 Query: 430 tt 431 || Sbjct: 392 tt 391
>gb|BC109525.1| Bos taurus cDNA clone MGC:134000 IMAGE:8054286, complete cds Length = 1432 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 394 aggatgtccaggcagatgctgccgttggagttgatgtt 431 |||||||| |||||||||||||| ||| ||||||||| Sbjct: 358 aggatgtcaaggcagatgctgccattgctgttgatgtt 321
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 388 tccttgaggatgtccaggcagatgctgccg 417 |||||||| ||||||||||||||| ||||| Sbjct: 855817 tccttgagaatgtccaggcagatgttgccg 855846
>gb|DQ241834.1| Solanum tuberosum clone 180C02 ubiquitin conjugating enzyme-like mRNA, complete cds Length = 1163 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 370 agcgccgggctccactgctccttgaggatgtccaggca 407 ||||| ||||||||||| ||||| |||||||| ||||| Sbjct: 381 agcgctgggctccactggtccttcaggatgtctaggca 344
>gb|DQ284494.1| Solanum tuberosum clone 063D04 ubiquitin-conjugating protein-like mRNA, complete cds Length = 808 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 370 agcgccgggctccactgctccttgaggatgtccaggca 407 ||||| ||||||||||| ||||| |||||||| ||||| Sbjct: 383 agcgctgggctccactggtccttcaggatgtctaggca 346
>gb|AY702916.1|AY702915S2 Pisum sativum ubiquitin conjugating enzyme E2 mRNA, partial cds Length = 197 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 212 atcagcccatggcgtacttctgggtccag 240 ||||||||||||| |||||||| |||||| Sbjct: 65 atcagcccatggcatacttctgagtccag 37
>gb|AY547312.1| Homo sapiens endothelin receptor type B (EDNRB) gene, complete cds Length = 83105 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 386 gctccttgaggatgtccaggcagat 410 |||||||||||| |||||||||||| Sbjct: 61954 gctccttgaggaagtccaggcagat 61930
>ref|XM_445717.1| Candida glabrata CBS138, CAGL0E00671g partial mRNA Length = 642 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 426 gatgtttgggtggtacacctt 446 ||||||||||||||||||||| Sbjct: 240 gatgtttgggtggtacacctt 220
>emb|AL357117.20| Human DNA sequence from clone RP11-436I24 on chromosome 6 Contains part of the gene for a novel protein (contains KIAA0680), a novel gene and a CpG island, complete sequence Length = 139627 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 aaaaactggttcagagaagct 142 ||||||||||||||||||||| Sbjct: 86413 aaaaactggttcagagaagct 86393
>emb|AL139002.18| Human DNA sequence from clone RP11-318G21 on chromosome 13q22.2-31.1 Contains the EDNRB gene for endothelin receptor type B, three novel genes and a CpG island, complete sequence Length = 183337 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 gctccttgaggatgtccaggcagat 410 |||||||||||| |||||||||||| Sbjct: 89205 gctccttgaggaagtccaggcagat 89229
>gb|AF424651.1| Phytophthora infestans clone MY-07-B-10 ubiquitin-conjugating enzyme mRNA, complete cds Length = 595 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 388 tccttgaggatgtccaggcagatgc 412 |||||||||||||| |||||||||| Sbjct: 311 tccttgaggatgtcgaggcagatgc 287
>emb|BX890604.9| Human DNA sequence from clone RP11-706O15 on chromosome X, complete sequence Length = 192469 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 342 gatggagagtaggaccttgga 362 ||||||||||||||||||||| Sbjct: 165936 gatggagagtaggaccttgga 165916
>ref|XM_776268.1| PREDICTED: Strongylocentrotus purpuratus similar to Ubiquitin-conjugating enzyme E2-17 kDa (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (Effete protein) (LOC575905), mRNA Length = 992 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 392 tgaggatgtccaggcagatgctgccgttggagttgatgtttgggtggta 440 |||||||||| | |||||||||||| ||| |||||| ||||| ||||| Sbjct: 327 tgaggatgtctaagcagatgctgccattgctgttgatatttggatggta 279
>emb|AL589879.21| Mouse DNA sequence from clone RP23-38E20 on chromosome 13 Contains the genes for H2b histone family member A, two H2a, two H4 and an H2b histone family member, a serine/threonine protein kinase pseudogene, a novel pseudogene, a novel gene (4930500C15Rik), the gene for a novel KRAB box and C2H2 Zinc Finger containing protein, a ribosomal protein L21 (RPL21) pseudogene, a TU mitochondrial translation elongation factor (tufa) pseudogene, the 5' end of the gene for a novel protein similar to nuclear envelope pore membrane protein POM121 and four CpG islands, complete sequence Length = 182817 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 cagttttcacaactgtacacaagta 122 ||||||||||||||||||| ||||| Sbjct: 21285 cagttttcacaactgtacataagta 21261
>emb|AJ005348.1|CAA005348 Cicer arietinum mRNA for ubiquitin conjugating enzyme Length = 384 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 212 atcagcccatggcgtacttctgggtccag 240 ||||||||||||| |||||||| |||||| Sbjct: 187 atcagcccatggcatacttctgagtccag 159 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 355 accttggatatggtcagcgccgggctccactgctccttgaggat 398 ||||| || ||||| ||||| ||||||||||| ||||| ||||| Sbjct: 44 accttagagatggtaagcgcagggctccactgttccttcaggat 1
>gb|AC084471.1|AC084471 Caenorhabditis briggsae cosmid CB048J20, complete sequence Length = 95539 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 acccaaagtttcgaaacagaa 83 ||||||||||||||||||||| Sbjct: 66094 acccaaagtttcgaaacagaa 66114
>gb|AY082009.1| Gossypium thurberi ubiquitin-conjugating enzyme E2 gene, complete cds Length = 2016 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 212 atcagcccatggcgtacttctgggtccag 240 |||| |||||||| ||||||||||||||| Sbjct: 1859 atcatcccatggcatacttctgggtccag 1831
>gb|AY082008.1| Gossypium arboreum ubiquitin-conjugating enzyme E2 gene, complete cds Length = 1985 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 212 atcagcccatggcgtacttctgggtccag 240 |||| |||||||| ||||||||||||||| Sbjct: 1867 atcatcccatggcatacttctgggtccag 1839
>gb|AY082005.1| Gossypium hirsutum ubiquitin-conjugating enzyme E2 (UBC2) mRNA, complete cds Length = 850 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 212 atcagcccatggcgtacttctgggtccag 240 |||| |||||||| ||||||||||||||| Sbjct: 616 atcatcccatggcatacttctgggtccag 588
>gb|AY082007.1| Gossypium hirsutum ubiquitin-conjugating enzyme E2 (UBC2) gene, complete cds Length = 1953 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 212 atcagcccatggcgtacttctgggtccag 240 |||| |||||||| ||||||||||||||| Sbjct: 1796 atcatcccatggcatacttctgggtccag 1768
>gb|AY082006.1| Gossypium hirsutum ubiquitin-conjugating enzyme E2 (UBC1) gene, complete cds Length = 1982 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 212 atcagcccatggcgtacttctgggtccag 240 |||| |||||||| ||||||||||||||| Sbjct: 1864 atcatcccatggcatacttctgggtccag 1836
>gb|AY082004.1| Gossypium hirsutum ubiquitin-conjugating enzyme E2 (UBC1) mRNA, complete cds Length = 773 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 212 atcagcccatggcgtacttctgggtccag 240 |||| |||||||| ||||||||||||||| Sbjct: 637 atcatcccatggcatacttctgggtccag 609
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 aggcgggaaaccggcgcggca 167 ||||||||||||||||||||| Sbjct: 1776273 aggcgggaaaccggcgcggca 1776293
>ref|XM_575764.1| PREDICTED: Rattus norvegicus similar to Ubiquitin-conjugating enzyme E2 C (Ubiquitin-protein ligase C) (Ubiquitin carrier protein C) (UbcH10) (LOC366307), mRNA Length = 615 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 388 tccttgaggatgtccaggcagatgctgcc 416 |||||||||||||||| ||||||| |||| Sbjct: 392 tccttgaggatgtccatgcagatgttgcc 364
>dbj|AK058360.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-F04, full insert sequence Length = 355 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 212 atcagcccatggcgtacttctgggtccag 240 |||| |||||||| ||||||||||||||| Sbjct: 148 atcatcccatggcatacttctgggtccag 120 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 292 atctccgggacaaggggatcgtcggggttggggtctgtaagcagggagc 340 ||||| |||||||| || ||||| ||||||||||| || ||||| |||| Sbjct: 68 atctcagggacaagagggtcgtccgggttggggtcagtgagcagcgagc 20
>gb|L29077.1|PEAUBC4 Pisum sativum ubiquitin conjugating enzyme (UBC4), complete cds Length = 909 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 212 atcagcccatggcgtacttctgggtccag 240 ||||||||||||| |||||||| |||||| Sbjct: 619 atcagcccatggcatacttctgagtccag 591
>gb|AC164602.7| Mus musculus chromosome 1, clone RP24-364G11, complete sequence Length = 205889 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ttgtttggaaattcactttt 465 |||||||||||||||||||| Sbjct: 119375 ttgtttggaaattcactttt 119356
>gb|AC162163.2| Mus musculus chromosome 1, clone RP23-258N15, complete sequence Length = 176915 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 ttgtttggaaattcactttt 465 |||||||||||||||||||| Sbjct: 175937 ttgtttggaaattcactttt 175956
>ref|XM_952067.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein B24H17.130 [imported] - Neurospora crassa OR74A ) (NCU01737.1) partial mRNA Length = 3198 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tagcgggctctctggttctt 278 |||||||||||||||||||| Sbjct: 1179 tagcgggctctctggttctt 1160
>ref|XM_328175.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein B24H17.130 [imported] - Neurospora crassa OR74A ) (NCU01737.1) partial mRNA Length = 3198 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tagcgggctctctggttctt 278 |||||||||||||||||||| Sbjct: 1179 tagcgggctctctggttctt 1160
>gb|AY597045.1| Oncorhynchus mykiss ubiquitin-conjugating enzyme E2D 2 isoform 1 mRNA, complete cds Length = 1535 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 tccaggcagatgctgccgtt 419 |||||||||||||||||||| Sbjct: 545 tccaggcagatgctgccgtt 526
>gb|AF427371.1| Uncultured organism clone N59MC.13SM putative xylanase gene, partial cds Length = 288 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gggacaaggggatcgtcggg 317 |||||||||||||||||||| Sbjct: 274 gggacaaggggatcgtcggg 255
>gb|AF427375.1| Uncultured organism clone N59MC.4SM putative xylanase gene, partial cds Length = 288 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gggacaaggggatcgtcggg 317 |||||||||||||||||||| Sbjct: 274 gggacaaggggatcgtcggg 255
>ref|XM_001003835.1| PREDICTED: Mus musculus RIKEN cDNA 2210015D19 gene, transcript variant 3 (2210015D19Rik), mRNA Length = 1854 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 394 aggatgtccaggcagatgctgccgttggagttgatgtttgggtg 437 |||||||||||||| |||||||| ||| |||||| || ||||| Sbjct: 251 aggatgtccaggcaaatgctgccattgctgttgatattagggtg 208
>ref|XM_001003819.1| PREDICTED: Mus musculus RIKEN cDNA 2210015D19 gene, transcript variant 1 (2210015D19Rik), mRNA Length = 430 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 394 aggatgtccaggcagatgctgccgttggagttgatgtttgggtg 437 |||||||||||||| |||||||| ||| |||||| || ||||| Sbjct: 194 aggatgtccaggcaaatgctgccattgctgttgatattagggtg 151
>ref|XM_900750.2| PREDICTED: Mus musculus RIKEN cDNA 2210015D19 gene, transcript variant 5 (2210015D19Rik), mRNA Length = 1854 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 394 aggatgtccaggcagatgctgccgttggagttgatgtttgggtg 437 |||||||||||||| |||||||| ||| |||||| || ||||| Sbjct: 251 aggatgtccaggcaaatgctgccattgctgttgatattagggtg 208
>ref|XM_893272.2| PREDICTED: Mus musculus RIKEN cDNA 2210015D19 gene, transcript variant 2 (2210015D19Rik), mRNA Length = 430 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 394 aggatgtccaggcagatgctgccgttggagttgatgtttgggtg 437 |||||||||||||| |||||||| ||| |||||| || ||||| Sbjct: 194 aggatgtccaggcaaatgctgccattgctgttgatattagggtg 151
>ref|XM_543022.2| PREDICTED: Canis familiaris similar to ubiquitin-conjugating enzyme E2C isoform 3, transcript variant 1 (LOC485898), mRNA Length = 592 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 tccttgaggatgtccaggcagatg 411 ||||| |||||||||||||||||| Sbjct: 411 tccttcaggatgtccaggcagatg 388
>ref|XM_861325.1| PREDICTED: Canis familiaris similar to ubiquitin-conjugating enzyme E2C isoform 3, transcript variant 2 (LOC485898), mRNA Length = 453 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 tccttgaggatgtccaggcagatg 411 ||||| |||||||||||||||||| Sbjct: 272 tccttcaggatgtccaggcagatg 249
>emb|CT025632.2| Pan troglodytes chromosome X clone PTB-029A18 map Xq28, complete sequence Length = 144091 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gaaaatgttctgtcttgata 27 |||||||||||||||||||| Sbjct: 95804 gaaaatgttctgtcttgata 95823
>ref|XM_387053.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06877.1) partial mRNA Length = 477 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 403 aggcagatgctgccgttggagttgatgt 430 ||||||||| |||||||||||| ||||| Sbjct: 293 aggcagatgatgccgttggagtagatgt 266
>ref|XM_538446.2| PREDICTED: Canis familiaris similar to ubiquitin-conjugating enzyme E2C (LOC481325), mRNA Length = 1299 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 tccttgaggatgtccaggcagatg 411 ||||| |||||||||||||||||| Sbjct: 1118 tccttcaggatgtccaggcagatg 1095
>gb|BC094935.1| Mus musculus cDNA clone IMAGE:30074732 Length = 1813 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 394 aggatgtccaggcagatgctgccgttggagttgatgtttgggtg 437 |||||||||||||| |||||||| ||| |||||| || ||||| Sbjct: 194 aggatgtccaggcaaatgctgccattgctgttgatattagggtg 151
>emb|X82938.1|LEUBC1 L.esculentum mRNA for ubiquitin conjugating enzyme Length = 923 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 376 gggctccactgctccttgaggatgtccaggca 407 ||||||||||| ||||| |||||||| ||||| Sbjct: 352 gggctccactggtccttcaggatgtctaggca 321
>emb|AL627069.10| Mouse DNA sequence from clone RP23-385C16 on chromosome 11 Contains the Mrps24 gene for mitochondrial ribosomal protein S24, a novel gene, a ubiquitin-conjugating enzyme E2D (Ube2d) pseudogene, the Dbnl gene for drebrin-like, the Pgam2 gene for phosphoglycerate mutase 2, a pseudogene similar to part of H+ transporting mitochondrial F0 complex ATP synthase subunit F Atp5j, the Polm gene for polymerase (DNA directed) mu, the Aebp1 gene for AE binding protein 1, the Pold2 gene for polymerase (DNA directed) delta 2 regulatory subunit, novel gene (1600028I17Rik) and seven CpG islands, complete sequence Length = 195129 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 394 aggatgtccaggcagatgctgccgttggagttgatgtttgggtg 437 |||||||||||||| |||||||| ||| |||||| || ||||| Sbjct: 85365 aggatgtccaggcaaatgctgccattgctgttgatattagggtg 85322
>emb|AL356815.1|NCB24H17 Neurospora crassa DNA linkage group II BAC clone B24H17 Length = 82972 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tagcgggctctctggttctt 278 |||||||||||||||||||| Sbjct: 40188 tagcgggctctctggttctt 40169
>gb|AC112169.2| Homo sapiens chromosome 5 clone CTD-2016H11, complete sequence Length = 168329 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgaaaatgttctgtcttgat 26 |||||||||||||||||||| Sbjct: 10525 tgaaaatgttctgtcttgat 10544
>gb|AC104984.14| Homo sapiens chromosome 17, clone RP11-354P11, complete sequence Length = 175136 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 ttgaaaatgttctgtcttgataca 29 ||||||||||||||| |||||||| Sbjct: 87749 ttgaaaatgttctgtattgataca 87726
>gb|AC008421.6| Homo sapiens chromosome 5 clone CTC-298E16, complete sequence Length = 97895 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgaaaatgttctgtcttgat 26 |||||||||||||||||||| Sbjct: 91071 tgaaaatgttctgtcttgat 91090
>dbj|AK009198.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310007D07 product:hypothetical Ubiquitin-conjugating enzymes containing protein, full insert sequence Length = 593 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 394 aggatgtccaggcagatgctgccgttggagttgatgtttgggtg 437 |||||||||||||| |||||||| ||| |||||| || ||||| Sbjct: 244 aggatgtccaggcaaatgctgccattgctgttgatattagggtg 201
>dbj|AK008730.1| Mus musculus adult male stomach cDNA, RIKEN full-length enriched library, clone:2210015D19 product:UBIQUITIN CONJUGATING ENZYME (FRAGMENT) homolog [Strongyloides stercoralis], full insert sequence Length = 981 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 394 aggatgtccaggcagatgctgccgttggagttgatgtttgggtg 437 |||||||||||||| |||||||| ||| |||||| || ||||| Sbjct: 217 aggatgtccaggcaaatgctgccattgctgttgatattagggtg 174
>dbj|AK005556.1| Mus musculus adult female placenta cDNA, RIKEN full-length enriched library, clone:1600028I17 product:unclassifiable, full insert sequence Length = 1840 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 394 aggatgtccaggcagatgctgccgttggagttgatgtttgggtg 437 |||||||||||||| |||||||| ||| |||||| || ||||| Sbjct: 486 aggatgtccaggcaaatgctgccattgctgttgatattagggtg 443
>gb|BC052911.1| Mus musculus RIKEN cDNA 2210015D19 gene, mRNA (cDNA clone IMAGE:30075836) Length = 1825 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 394 aggatgtccaggcagatgctgccgttggagttgatgtttgggtg 437 |||||||||||||| |||||||| ||| |||||| || ||||| Sbjct: 206 aggatgtccaggcaaatgctgccattgctgttgatattagggtg 163
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ggctctctggttcttgtaga 283 |||||||||||||||||||| Sbjct: 26759799 ggctctctggttcttgtaga 26759818
>gb|AC087255.1|AC087255 Caenorhabditis briggsae cosmid CB021H06, complete sequence Length = 110191 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgaaaatgttctgtcttgat 26 |||||||||||||||||||| Sbjct: 48112 tgaaaatgttctgtcttgat 48131
>gb|AC005539.1| Homo sapiens BAC clone RP11-335J18 from 2, complete sequence Length = 209613 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ttgaaaatgttctgtcttga 25 |||||||||||||||||||| Sbjct: 99484 ttgaaaatgttctgtcttga 99465
>ref|XM_580007.1| PREDICTED: Rattus norvegicus LOC499726 (LOC499726), mRNA Length = 2778 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 taaaaactggttcagagaag 140 |||||||||||||||||||| Sbjct: 1871 taaaaactggttcagagaag 1890
>gb|AF274573.4| Homo sapiens chromosome X clone RP11-316K19, RP11-316M19, RP4-687A5 map q28, complete sequence Length = 189436 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gaaaatgttctgtcttgata 27 |||||||||||||||||||| Sbjct: 116734 gaaaatgttctgtcttgata 116753
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ggctctctggttcttgtaga 283 |||||||||||||||||||| Sbjct: 106656 ggctctctggttcttgtaga 106675
>dbj|AP003832.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1458_B07 Length = 99415 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ggctctctggttcttgtaga 283 |||||||||||||||||||| Sbjct: 5973 ggctctctggttcttgtaga 5992
>dbj|AP000756.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-720D4, complete sequence Length = 170977 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgaaaatgttctgtcttgat 26 |||||||||||||||||||| Sbjct: 19036 tgaaaatgttctgtcttgat 19055
>emb|AL845273.7| Mouse DNA sequence from clone RP23-334D15 on chromosome 2, complete sequence Length = 158861 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 aaatgcaaacattacccagt 101 |||||||||||||||||||| Sbjct: 5749 aaatgcaaacattacccagt 5768 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,960,445 Number of Sequences: 3902068 Number of extensions: 3960445 Number of successful extensions: 84196 Number of sequences better than 10.0: 234 Number of HSP's better than 10.0 without gapping: 235 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 83547 Number of HSP's gapped (non-prelim): 633 length of query: 470 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 448 effective length of database: 17,147,199,772 effective search space: 7681945497856 effective search space used: 7681945497856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)