ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24j08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009262.1| Triticum aestivum clone wlk4.pk0022.b7:fis, full ... 297 1e-77
2dbj|AK061865.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 2e-36
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
4dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
5dbj|AK065102.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 2e-36
6dbj|AB001920.1| Oryza sativa (japonica cultivar-group) gene for ... 161 2e-36
7dbj|D73411.1|RICPHD2 Oryza sativa (japonica cultivar-group) mRNA... 161 2e-36
8dbj|AK119523.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 5e-34
9gb|AY109642.1| Zea mays CL1830_1 mRNA sequence 137 3e-29
10dbj|D73410.1|MZEPHD1 Zea mays mRNA for phospholipase D, complete... 137 3e-29
11gb|AY105267.1| Zea mays PCO139922 mRNA sequence 123 5e-25
12gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome... 64 4e-07
13dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
14gb|DQ267933.1| Cucumis melo var. inodorus phospholipase D-alpha ... 48 0.023
15dbj|AB232324.1| Arachis hypogaea plda2 gene for phospholipase D ... 46 0.089
16dbj|AB232322.1| Arachis hypogaea plda2 mRNA for phospholipase D ... 46 0.089
17gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complet... 46 0.089
18ref|NM_112443.1| Arabidopsis thaliana PLDALPHA1 (PHOSPHOLIPASE D... 44 0.35
19gb|BT014735.1| Arabidopsis thaliana At3g15730.1 mRNA sequence 44 0.35
20gb|AF428278.1|AF428278 Arabidopsis thaliana AT3g15730/MSJ11_13 m... 44 0.35
21gb|BT003026.1| Arabidopsis thaliana At3g15730/MSJ11_13 gene, com... 44 0.35
22dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 44 0.35
23emb|X56656.1|LEPHOA L.enzymogenes phoA gene for secreted alkalin... 42 1.4
24dbj|BS000229.1| Pan troglodytes chromosome 22 clone:RP43-015P20,... 42 1.4
25dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 1.4
26dbj|AP001626.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 42 1.4
27dbj|AB017602.1| Homo sapiens PDE9A gene for cGMP phosphodiestera... 42 1.4
28gb|BC032099.2| Homo sapiens pygopus homolog 2 (Drosophila), mRNA... 40 5.5
29gb|BC013725.1| Homo sapiens pygopus homolog 2 (Drosophila), mRNA... 40 5.5
30ref|XM_525221.1| PREDICTED: Pan troglodytes similar to Pygopus h... 40 5.5
31ref|XM_593770.2| PREDICTED: Bos taurus similar to Pygopus homolo... 40 5.5
32ref|NM_138300.3| Homo sapiens pygopus homolog 2 (Drosophila) (PY... 40 5.5
33gb|AC132454.3| Mus musculus BAC clone RP23-127P22 from chromosom... 40 5.5
34emb|AL451085.20| Human DNA sequence from clone RP11-307C12 on ch... 40 5.5
35emb|CR860452.1| Pongo pygmaeus mRNA; cDNA DKFZp459G041 (from clo... 40 5.5
36emb|CR624320.1| full-length cDNA clone CS0DL007YH03 of B cells (... 40 5.5
37dbj|AK095899.1| Homo sapiens cDNA FLJ38580 fis, clone HCHON20085... 40 5.5
38dbj|AK092389.1| Homo sapiens cDNA FLJ35070 fis, clone PLACE5000139 40 5.5
39dbj|AK090545.1| Homo sapiens cDNA FLJ33226 fis, clone ASTRO2001029 40 5.5
40dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 40 5.5
41gb|AF457208.1| Homo sapiens pygopus 2 (PYGO2) mRNA, complete cds 40 5.5
42gb|AF289598.1|AF289598 Homo sapiens clone pp7910 unknown mRNA 40 5.5
43gb|BC006132.1| Homo sapiens pygopus homolog 2 (Drosophila), mRNA... 40 5.5
44emb|BX908754.8| Zebrafish DNA sequence from clone DKEY-196D8 in ... 40 5.5
45gb|AY294150.1| Platyamoeba placida small subunit ribosomal RNA g... 40 5.5 
>gb|BT009262.1| Triticum aestivum clone wlk4.pk0022.b7:fis, full insert mRNA sequence
          Length = 2997

 Score =  297 bits (150), Expect = 1e-77
 Identities = 165/170 (97%)
 Strand = Plus / Minus

                                                                        
Query: 242  atctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccgg 301
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2571 atctatgtggtgaggatggggggaaggtagtccgacttggcgccgaggatgcgggcccgg 2512

                                                                        
Query: 302  gtgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacacca 361
            ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| || 
Sbjct: 2511 gtgtcggggaagaactccatgcccggcagctccgtcaccacgccgtcgctggcgacgccg 2452

                                                              
Query: 362  atggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgct 411
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2451 atggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgct 2402



 Score =  168 bits (85), Expect = 9e-39
 Identities = 100/105 (95%)
 Strand = Plus / Minus

                                                                        
Query: 94   tagtcactaccgcgtttctcaaccatgcacaccactgcgcttattaactgtcccacaact 153
            |||||||||||| | ||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 2712 tagtcactaccgtggttctcaaccatgcacaccactgcgcttattaacagtcccgcaact 2653

                                                         
Query: 154  ataacaacctgctattttctgaaacacaagttctgaatcaccaaa 198
            |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2652 ataacagcctgctattttctgaaacacaagttctgaatcaccaaa 2608



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/48 (91%), Gaps = 1/48 (2%)
 Strand = Plus / Minus

                                                            
Query: 1    tttataattaaacagnaatacaaacatcagnaaaccgtgtaaagtatc 48
            |||||||||||||||  ||||||||| ||| |||||||||||||||||
Sbjct: 2770 tttataattaaacagtgatacaaacagcag-aaaccgtgtaaagtatc 2724
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>dbj|AK061865.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-H06, full
           insert sequence
          Length = 1084

 Score =  161 bits (81), Expect = 2e-36
 Identities = 147/169 (86%)
 Strand = Plus / Minus

                                                                       
Query: 243 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 302
           |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 769 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 710

                                                                       
Query: 303 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 362
           |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| ||||
Sbjct: 709 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 650

                                                            
Query: 363 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgct 411
           |||||||||| || |||||||| |||||||||||||  |||||||||||
Sbjct: 649 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgct 601
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  161 bits (81), Expect = 2e-36
 Identities = 147/169 (86%)
 Strand = Plus / Plus

                                                                           
Query: 243     tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 302
               |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 3723982 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 3724041

                                                                           
Query: 303     tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 362
               |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| ||||
Sbjct: 3724042 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 3724101

                                                                
Query: 363     tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgct 411
               |||||||||| || |||||||| |||||||||||||  |||||||||||
Sbjct: 3724102 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgct 3724150
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>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0583G08
          Length = 135295

 Score =  161 bits (81), Expect = 2e-36
 Identities = 147/169 (86%)
 Strand = Plus / Plus

                                                                          
Query: 243    tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 302
              |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 132462 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 132521

                                                                          
Query: 303    tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 362
              |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| ||||
Sbjct: 132522 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 132581

                                                               
Query: 363    tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgct 411
              |||||||||| || |||||||| |||||||||||||  |||||||||||
Sbjct: 132582 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgct 132630
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>dbj|AK065102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N03, full
            insert sequence
          Length = 2851

 Score =  161 bits (81), Expect = 2e-36
 Identities = 147/169 (86%)
 Strand = Plus / Minus

                                                                        
Query: 243  tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 302
            |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 2553 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 2494

                                                                        
Query: 303  tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 362
            |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| ||||
Sbjct: 2493 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 2434

                                                             
Query: 363  tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgct 411
            |||||||||| || |||||||| |||||||||||||  |||||||||||
Sbjct: 2433 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgct 2385
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>dbj|AB001920.1| Oryza sativa (japonica cultivar-group) gene for phospholipase D,
            complete cds
          Length = 5871

 Score =  161 bits (81), Expect = 2e-36
 Identities = 147/169 (86%)
 Strand = Plus / Minus

                                                                        
Query: 243  tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 302
            |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 5333 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 5274

                                                                        
Query: 303  tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 362
            |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| ||||
Sbjct: 5273 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 5214

                                                             
Query: 363  tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgct 411
            |||||||||| || |||||||| |||||||||||||  |||||||||||
Sbjct: 5213 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgct 5165
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>dbj|D73411.1|RICPHD2 Oryza sativa (japonica cultivar-group) mRNA for phospholipase D,
            complete cds
          Length = 2990

 Score =  161 bits (81), Expect = 2e-36
 Identities = 147/169 (86%)
 Strand = Plus / Minus

                                                                        
Query: 243  tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 302
            |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 2621 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 2562

                                                                        
Query: 303  tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 362
            |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| ||||
Sbjct: 2561 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 2502

                                                             
Query: 363  tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgct 411
            |||||||||| || |||||||| |||||||||||||  |||||||||||
Sbjct: 2501 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgct 2453
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>dbj|AK119523.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E03, full
            insert sequence
          Length = 2831

 Score =  153 bits (77), Expect = 5e-34
 Identities = 146/169 (86%)
 Strand = Plus / Minus

                                                                        
Query: 243  tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 302
            |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 2559 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 2500

                                                                        
Query: 303  tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 362
            |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||| | ||||
Sbjct: 2499 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcggcgccaa 2440

                                                             
Query: 363  tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgct 411
            |||||||||| || |||||||| |||||||||||||  |||||||||||
Sbjct: 2439 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgct 2391
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>gb|AY109642.1| Zea mays CL1830_1 mRNA sequence
          Length = 2876

 Score =  137 bits (69), Expect = 3e-29
 Identities = 144/169 (85%)
 Strand = Plus / Minus

                                                                        
Query: 243  tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 302
            ||||||||||||||||||| || ||||| ||||||||| | ||||||| |||||| ||||
Sbjct: 2546 tctatgtggtgaggatgggcgggaggtaatccgacttgttcccgaggacgcgggcgcggg 2487

                                                                        
Query: 303  tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 362
            |||||||||||  |||||| || |||||||| || ||   |||||||   | |||||| |
Sbjct: 2486 tgtcggggaagttctccatcccgggcagctcggtaacgctgccgtcggcagtgacaccga 2427

                                                             
Query: 363  tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgct 411
            | |||||||| || |||||||| ||||||||||||||||||||||||||
Sbjct: 2426 tcgggtagctgaggaggtggcccgggaggtcctgctccaggtcgtcgct 2378
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>dbj|D73410.1|MZEPHD1 Zea mays mRNA for phospholipase D, complete cds
          Length = 2793

 Score =  137 bits (69), Expect = 3e-29
 Identities = 144/169 (85%)
 Strand = Plus / Minus

                                                                        
Query: 243  tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 302
            ||||||||||||||||||| || ||||| ||||||||| | ||||||| |||||| ||||
Sbjct: 2546 tctatgtggtgaggatgggcgggaggtaatccgacttgttcccgaggacgcgggcgcggg 2487

                                                                        
Query: 303  tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 362
            |||||||||||  |||||| || |||||||| || ||   |||||||   | |||||| |
Sbjct: 2486 tgtcggggaagttctccatcccgggcagctcggtaacgctgccgtcggcagtgacaccga 2427

                                                             
Query: 363  tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgct 411
            | |||||||| || |||||||| ||||||||||||||||||||||||||
Sbjct: 2426 tcgggtagctgaggaggtggcccgggaggtcctgctccaggtcgtcgct 2378
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>gb|AY105267.1| Zea mays PCO139922 mRNA sequence
          Length = 541

 Score =  123 bits (62), Expect = 5e-25
 Identities = 137/162 (84%)
 Strand = Plus / Plus

                                                                       
Query: 244 ctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccgggt 303
           |||||||||||||||||| || ||||| ||||||||| ||||||||| |||||| |||||
Sbjct: 353 ctatgtggtgaggatgggcgggaggtaatccgacttgttgccgaggacgcgggcacgggt 412

                                                                       
Query: 304 gtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaat 363
           ||| ||||||  |||||| || |||||||| || ||   |||||||   | |||||| ||
Sbjct: 413 gtcagggaagttctccatcccgggcagctcagtaacggtgccgtcggcagtgacaccgat 472

                                                     
Query: 364 ggggtagctcagcaggtggccggggaggtcctgctccaggtc 405
            |||||||| || |||||||| ||||||||||||||||||||
Sbjct: 473 cgggtagctgaggaggtggcccgggaggtcctgctccaggtc 514
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>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10,
             complete sequence
          Length = 156772

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 104/128 (81%)
 Strand = Plus / Plus

                                                                         
Query: 266   aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaactccatgcca 325
             |||||||| || |||| ||| ||||| || ||| ||||||| ||||||||||||| ||| 
Sbjct: 83490 aggtagtcggatttggcgccaaggatccgcgcctgggtgtccgggaagaactccacgccg 83549

                                                                         
Query: 326   ggcagctccgtcaccacgccgtcgttggcgacaccaatggggtagctcagcaggtggccg 385
             || |||| ||| |    |||||||  |||||| || | ||||||| | ||||||||||||
Sbjct: 83550 gggagctgcgtgatggtgccgtcgccggcgacgccgacggggtaggtgagcaggtggccg 83609

                     
Query: 386   gggaggtc 393
             ||||||||
Sbjct: 83610 gggaggtc 83617
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 104/128 (81%)
 Strand = Plus / Plus

                                                                           
Query: 266     aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaactccatgcca 325
               |||||||| || |||| ||| ||||| || ||| ||||||| ||||||||||||| ||| 
Sbjct: 4197011 aggtagtcggatttggcgccaaggatccgcgcctgggtgtccgggaagaactccacgccg 4197070

                                                                           
Query: 326     ggcagctccgtcaccacgccgtcgttggcgacaccaatggggtagctcagcaggtggccg 385
               || |||| ||| |    |||||||  |||||| || | ||||||| | ||||||||||||
Sbjct: 4197071 gggagctgcgtgatggtgccgtcgccggcgacgccgacggggtaggtgagcaggtggccg 4197130

                       
Query: 386     gggaggtc 393
               ||||||||
Sbjct: 4197131 gggaggtc 4197138
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>gb|DQ267933.1| Cucumis melo var. inodorus phospholipase D-alpha (PLDa1) mRNA,
            complete cds
          Length = 2877

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 251  gtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccgggtgtcgggg 310
            ||||||||||| || |||||||| || ||||| ||||| || || ||   ||||||||||
Sbjct: 2527 gtgaggatgggagggaggtagtcggatttggtaccgagtatacgagctttggtgtcgggg 2468

                    
Query: 311  aagaactc 318
            ||||||||
Sbjct: 2467 aagaactc 2460
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>dbj|AB232324.1| Arachis hypogaea plda2 gene for phospholipase D alpha 2, complete cds
          Length = 3913

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 359  ccaatggggtagctcagcaggtggccggggaggtc 393
            |||| |||||||| ||| |||||||||||||||||
Sbjct: 3578 ccaacggggtagcgcagaaggtggccggggaggtc 3544
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>dbj|AB232322.1| Arachis hypogaea plda2 mRNA for phospholipase D alpha 2, complete cds
          Length = 2724

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 359  ccaatggggtagctcagcaggtggccggggaggtc 393
            |||| |||||||| ||| |||||||||||||||||
Sbjct: 2363 ccaacggggtagcgcagaaggtggccggggaggtc 2329
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>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence
          Length = 209156

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 245   tatgtggtgaggatggggggaag 267
             |||||||||||||||||||||||
Sbjct: 92801 tatgtggtgaggatggggggaag 92779
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>ref|NM_112443.1| Arabidopsis thaliana PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1);
            phospholipase D AT3G15730 (PLDALPHA1) mRNA, complete cds
          Length = 2795

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 266  aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 315
            |||||||| || |||||||||||||| ||||||   ||||| ||||||||
Sbjct: 2502 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 2453
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>gb|BT014735.1| Arabidopsis thaliana At3g15730.1 mRNA sequence
          Length = 718

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 266 aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 315
           |||||||| || |||||||||||||| ||||||   ||||| ||||||||
Sbjct: 696 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 647
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>gb|AF428278.1|AF428278 Arabidopsis thaliana AT3g15730/MSJ11_13 mRNA, complete cds
          Length = 1886

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 266  aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 315
            |||||||| || |||||||||||||| ||||||   ||||| ||||||||
Sbjct: 1597 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 1548
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>gb|BT003026.1| Arabidopsis thaliana At3g15730/MSJ11_13 gene, complete cds
          Length = 1572

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 266  aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 315
            |||||||| || |||||||||||||| ||||||   ||||| ||||||||
Sbjct: 1550 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 1501
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>dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSJ11
          Length = 81370

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 266   aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 315
             |||||||| || |||||||||||||| ||||||   ||||| ||||||||
Sbjct: 42804 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 42755
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>emb|X56656.1|LEPHOA L.enzymogenes phoA gene for secreted alkaline phosphatase
          Length = 2292

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 337  caccacgccgtcgttggcgac 357
            |||||||||||||||||||||
Sbjct: 1948 caccacgccgtcgttggcgac 1928
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>dbj|BS000229.1| Pan troglodytes chromosome 22 clone:RP43-015P20, map 22, complete
             sequences
          Length = 179285

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 311   aagaactccatgccaggcagc 331
             |||||||||||||||||||||
Sbjct: 53521 aagaactccatgccaggcagc 53541
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>dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, section 91/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 311    aagaactccatgccaggcagc 331
              |||||||||||||||||||||
Sbjct: 146957 aagaactccatgccaggcagc 146977
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>dbj|AP001626.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1559F8, MX1-D21S171
             region, complete sequence
          Length = 145762

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 311   aagaactccatgccaggcagc 331
             |||||||||||||||||||||
Sbjct: 78005 aagaactccatgccaggcagc 78025
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>dbj|AB017602.1| Homo sapiens PDE9A gene for cGMP phosphodiesterase, complete cds
          Length = 125000

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 311  aagaactccatgccaggcagc 331
            |||||||||||||||||||||
Sbjct: 1390 aagaactccatgccaggcagc 1410
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>gb|BC032099.2| Homo sapiens pygopus homolog 2 (Drosophila), mRNA (cDNA clone
           MGC:20502 IMAGE:4126360), complete cds
          Length = 3190

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 gtggtgaggatggggggaag 267
           ||||||||||||||||||||
Sbjct: 936 gtggtgaggatggggggaag 955
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>gb|BC013725.1| Homo sapiens pygopus homolog 2 (Drosophila), mRNA (cDNA clone
           IMAGE:3859726), partial cds
          Length = 2508

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 gtggtgaggatggggggaag 267
           ||||||||||||||||||||
Sbjct: 246 gtggtgaggatggggggaag 265
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>ref|XM_525221.1| PREDICTED: Pan troglodytes similar to Pygopus homolog 2
           (LOC469836), mRNA
          Length = 1083

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 gtggtgaggatggggggaag 267
           ||||||||||||||||||||
Sbjct: 626 gtggtgaggatggggggaag 645
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>ref|XM_593770.2| PREDICTED: Bos taurus similar to Pygopus homolog 2 (LOC540401), mRNA
          Length = 1773

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 248  gtggtgaggatggggggaag 267
            ||||||||||||||||||||
Sbjct: 1106 gtggtgaggatggggggaag 1125
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>ref|NM_138300.3| Homo sapiens pygopus homolog 2 (Drosophila) (PYGO2), mRNA
          Length = 3227

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 gtggtgaggatggggggaag 267
           ||||||||||||||||||||
Sbjct: 970 gtggtgaggatggggggaag 989
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>gb|AC132454.3| Mus musculus BAC clone RP23-127P22 from chromosome 19, complete sequence
          Length = 225152

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 169    tttctgaaacacaagttctg 188
              ||||||||||||||||||||
Sbjct: 136964 tttctgaaacacaagttctg 136945
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>emb|AL451085.20| Human DNA sequence from clone RP11-307C12 on chromosome 1 Contains the
             PMVK gene for phosphomevalonate kinase, the PBXIP1 gene
             for pre-B-cell leukemia transcription factor interacting
             protein 1, the gene for pygopus 2 (PYGO2), the  SHC1 gene
             for SHC (Src homology 2 domain containing) transforming
             protein 1, the CKS1B gene for CDC28 protein kinase
             regulatory subunit 1B, the gene for FAD-synthetase
             (PP591), the LENEP gene for lens epithelial protein, the
             ZFP67 gene for zinc finger protein 67 homolog (mouse), the
             gene for a novel protein (FLJ32934), a novel gene, the
             gene for a novel protein (FLJ32785) the 5' end of the
             ADAM15 gene for a disintegrin and metalloproteinase domain
             15 (metargidin), and two CpG islands, complete sequence
          Length = 182166

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   gtggtgaggatggggggaag 267
             ||||||||||||||||||||
Sbjct: 87674 gtggtgaggatggggggaag 87655
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>emb|CR860452.1| Pongo pygmaeus mRNA; cDNA DKFZp459G041 (from clone DKFZp459G041)
          Length = 3222

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 248  gtggtgaggatggggggaag 267
            ||||||||||||||||||||
Sbjct: 993  gtggtgaggatggggggaag 1012
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>emb|CR624320.1| full-length cDNA clone CS0DL007YH03 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 2734

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 gtggtgaggatggggggaag 267
           ||||||||||||||||||||
Sbjct: 540 gtggtgaggatggggggaag 559
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>dbj|AK095899.1| Homo sapiens cDNA FLJ38580 fis, clone HCHON2008582, highly similar
           to FERRITIN HEAVY CHAIN
          Length = 2034

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 gtggtgaggatggggggaag 267
           ||||||||||||||||||||
Sbjct: 810 gtggtgaggatggggggaag 829
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>dbj|AK092389.1| Homo sapiens cDNA FLJ35070 fis, clone PLACE5000139
          Length = 3128

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 gtggtgaggatggggggaag 267
           ||||||||||||||||||||
Sbjct: 919 gtggtgaggatggggggaag 938
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>dbj|AK090545.1| Homo sapiens cDNA FLJ33226 fis, clone ASTRO2001029
          Length = 2497

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 gtggtgaggatggggggaag 267
           ||||||||||||||||||||
Sbjct: 288 gtggtgaggatggggggaag 307
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>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 40      taaagtatccaagtctcatattac 63
               |||| |||||||||||||||||||
Sbjct: 2285010 taaactatccaagtctcatattac 2284987
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>gb|AF457208.1| Homo sapiens pygopus 2 (PYGO2) mRNA, complete cds
          Length = 1221

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 gtggtgaggatggggggaag 267
           ||||||||||||||||||||
Sbjct: 764 gtggtgaggatggggggaag 783
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>gb|AF289598.1|AF289598 Homo sapiens clone pp7910 unknown mRNA
          Length = 2977

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 gtggtgaggatggggggaag 267
           ||||||||||||||||||||
Sbjct: 720 gtggtgaggatggggggaag 739
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>gb|BC006132.1| Homo sapiens pygopus homolog 2 (Drosophila), mRNA (cDNA clone
           MGC:13050 IMAGE:3627860), complete cds
          Length = 3193

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 gtggtgaggatggggggaag 267
           ||||||||||||||||||||
Sbjct: 936 gtggtgaggatggggggaag 955
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>emb|BX908754.8| Zebrafish DNA sequence from clone DKEY-196D8 in linkage group 18,
             complete sequence
          Length = 94961

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 152   ctataacaacctgctattttctga 175
             |||||||| |||||||||||||||
Sbjct: 39144 ctataacaccctgctattttctga 39167
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>gb|AY294150.1| Platyamoeba placida small subunit ribosomal RNA gene, partial
           sequence
          Length = 1893

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgaatcaccaaaggaaccac 206
           ||||||||||||||||||||
Sbjct: 238 tgaatcaccaaaggaaccac 219


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,990,729
Number of Sequences: 3902068
Number of extensions: 2990729
Number of successful extensions: 64689
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 64595
Number of HSP's gapped (non-prelim): 88
length of query: 411
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 389
effective length of database: 17,147,199,772
effective search space: 6670260711308
effective search space used: 6670260711308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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