ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24j06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479194.1| Oryza sativa (japonica cultivar-group), mRNA 159 1e-35
2ref|XM_507395.1| PREDICTED Oryza sativa (japonica cultivar-group... 159 1e-35
3ref|XM_506483.2| PREDICTED Oryza sativa (japonica cultivar-group... 159 1e-35
4dbj|AK103285.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 1e-35
5dbj|AK069142.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 1e-35
6dbj|AK058506.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 3e-33
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
8dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
9dbj|AK099133.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
10dbj|AK059680.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
11gb|AE011943.1| Xanthomonas axonopodis pv. citri str. 306, secti... 44 0.52
12gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genom... 40 8.1
13gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 40 8.1
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.1
15gb|AC127315.4| Mus musculus BAC clone RP23-218F21 from chromosom... 40 8.1
16gb|BC035516.1| Homo sapiens coiled-coil domain containing 71, mR... 40 8.1
17dbj|AK094432.1| Homo sapiens cDNA FLJ37113 fis, clone BRACE2021708 40 8.1
18emb|CR610877.1| full-length cDNA clone CS0DI041YC15 of Placenta ... 40 8.1
19emb|CR608073.1| full-length cDNA clone CS0DL002YD03 of B cells (... 40 8.1
20emb|CR608045.1| full-length cDNA clone CS0DJ001YB01 of T cells (... 40 8.1
21dbj|AK022862.1| Homo sapiens cDNA FLJ12800 fis, clone NT2RP20020... 40 8.1
22ref|NM_022903.2| Homo sapiens coiled-coil domain containing 71 (... 40 8.1
23gb|AC155289.11| Mus musculus 6 BAC RP24-137B5 (Roswell Park Canc... 40 8.1
24gb|AC135506.3| Homo sapiens chromosome 3 clone RP11-694I15, comp... 40 8.1
25dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
26gb|AC115914.6| Mus musculus chromosome 8, clone RP24-487J5, comp... 40 8.1
27dbj|AK098658.1| Homo sapiens cDNA FLJ25792 fis, clone TST06958 40 8.1
28ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@)... 40 8.1
29emb|AL732559.9| Mouse DNA sequence from clone RP23-9A5 on chromo... 40 8.1
30dbj|D87003.1| Homo sapiens immunoglobulin lambda gene locus DNA,... 40 8.1
31dbj|AP000897.6| Homo sapiens genomic DNA, chromosome 18, clone:R... 40 8.1 
>ref|XM_479194.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 812

 Score =  159 bits (80), Expect = 1e-35
 Identities = 188/224 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 cgagactcaaatccacaagtaccaagatgacttgcaagtttctctccacattgcttctgc 204
           ||||| ||||||||||| || || || ||| |||| |||||||||||||||||||| |||
Sbjct: 491 cgagattcaaatccacaggtgcccaggtgatttgccagtttctctccacattgcttttgc 432

                                                                       
Query: 205 caatcttctgccaccttgacctcaggagttgtccacacgacagcccttgcttccttataa 264
           |||||||| ||| ||||||||||||  |||||| | || || ||  ||||||||||| ||
Sbjct: 431 caatcttcagccgccttgacctcagctgttgtcaagacaactgcttttgcttccttaaaa 372

                                                                       
Query: 265 tcaactgtagcagaagtaacctcgggctgactctcgagaatccgcttgacgctggcagcg 324
           ||||| || |||||||| || || || || ||||| | ||||||||| ||||| || |||
Sbjct: 371 tcaacggtggcagaagtgacttcaggttggctctccaaaatccgcttcacgctcgccgcg 312

                                                       
Query: 325 cacccgtcgcacatcatgccctgaacactgagcaagatggcctc 368
           ||||| ||||||||||| ||||| || ||||||| |||||||||
Sbjct: 311 cacccatcgcacatcatcccctggacgctgagcaggatggcctc 268
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>ref|XM_507395.1| PREDICTED Oryza sativa (japonica cultivar-group), P0524E08.111 mRNA
          Length = 877

 Score =  159 bits (80), Expect = 1e-35
 Identities = 188/224 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 cgagactcaaatccacaagtaccaagatgacttgcaagtttctctccacattgcttctgc 204
           ||||| ||||||||||| || || || ||| |||| |||||||||||||||||||| |||
Sbjct: 569 cgagattcaaatccacaggtgcccaggtgatttgccagtttctctccacattgcttttgc 510

                                                                       
Query: 205 caatcttctgccaccttgacctcaggagttgtccacacgacagcccttgcttccttataa 264
           |||||||| ||| ||||||||||||  |||||| | || || ||  ||||||||||| ||
Sbjct: 509 caatcttcagccgccttgacctcagctgttgtcaagacaactgcttttgcttccttaaaa 450

                                                                       
Query: 265 tcaactgtagcagaagtaacctcgggctgactctcgagaatccgcttgacgctggcagcg 324
           ||||| || |||||||| || || || || ||||| | ||||||||| ||||| || |||
Sbjct: 449 tcaacggtggcagaagtgacttcaggttggctctccaaaatccgcttcacgctcgccgcg 390

                                                       
Query: 325 cacccgtcgcacatcatgccctgaacactgagcaagatggcctc 368
           ||||| ||||||||||| ||||| || ||||||| |||||||||
Sbjct: 389 cacccatcgcacatcatcccctggacgctgagcaggatggcctc 346
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>ref|XM_506483.2| PREDICTED Oryza sativa (japonica cultivar-group), P0524E08.111 mRNA
          Length = 1077

 Score =  159 bits (80), Expect = 1e-35
 Identities = 188/224 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 cgagactcaaatccacaagtaccaagatgacttgcaagtttctctccacattgcttctgc 204
           ||||| ||||||||||| || || || ||| |||| |||||||||||||||||||| |||
Sbjct: 597 cgagattcaaatccacaggtgcccaggtgatttgccagtttctctccacattgcttttgc 538

                                                                       
Query: 205 caatcttctgccaccttgacctcaggagttgtccacacgacagcccttgcttccttataa 264
           |||||||| ||| ||||||||||||  |||||| | || || ||  ||||||||||| ||
Sbjct: 537 caatcttcagccgccttgacctcagctgttgtcaagacaactgcttttgcttccttaaaa 478

                                                                       
Query: 265 tcaactgtagcagaagtaacctcgggctgactctcgagaatccgcttgacgctggcagcg 324
           ||||| || |||||||| || || || || ||||| | ||||||||| ||||| || |||
Sbjct: 477 tcaacggtggcagaagtgacttcaggttggctctccaaaatccgcttcacgctcgccgcg 418

                                                       
Query: 325 cacccgtcgcacatcatgccctgaacactgagcaagatggcctc 368
           ||||| ||||||||||| ||||| || ||||||| |||||||||
Sbjct: 417 cacccatcgcacatcatcccctggacgctgagcaggatggcctc 374
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>dbj|AK103285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124M20, full
           insert sequence
          Length = 812

 Score =  159 bits (80), Expect = 1e-35
 Identities = 188/224 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 cgagactcaaatccacaagtaccaagatgacttgcaagtttctctccacattgcttctgc 204
           ||||| ||||||||||| || || || ||| |||| |||||||||||||||||||| |||
Sbjct: 491 cgagattcaaatccacaggtgcccaggtgatttgccagtttctctccacattgcttttgc 432

                                                                       
Query: 205 caatcttctgccaccttgacctcaggagttgtccacacgacagcccttgcttccttataa 264
           |||||||| ||| ||||||||||||  |||||| | || || ||  ||||||||||| ||
Sbjct: 431 caatcttcagccgccttgacctcagctgttgtcaagacaactgcttttgcttccttaaaa 372

                                                                       
Query: 265 tcaactgtagcagaagtaacctcgggctgactctcgagaatccgcttgacgctggcagcg 324
           ||||| || |||||||| || || || || ||||| | ||||||||| ||||| || |||
Sbjct: 371 tcaacggtggcagaagtgacttcaggttggctctccaaaatccgcttcacgctcgccgcg 312

                                                       
Query: 325 cacccgtcgcacatcatgccctgaacactgagcaagatggcctc 368
           ||||| ||||||||||| ||||| || ||||||| |||||||||
Sbjct: 311 cacccatcgcacatcatcccctggacgctgagcaggatggcctc 268
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>dbj|AK069142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008N22, full
           insert sequence
          Length = 1077

 Score =  159 bits (80), Expect = 1e-35
 Identities = 188/224 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 cgagactcaaatccacaagtaccaagatgacttgcaagtttctctccacattgcttctgc 204
           ||||| ||||||||||| || || || ||| |||| |||||||||||||||||||| |||
Sbjct: 597 cgagattcaaatccacaggtgcccaggtgatttgccagtttctctccacattgcttttgc 538

                                                                       
Query: 205 caatcttctgccaccttgacctcaggagttgtccacacgacagcccttgcttccttataa 264
           |||||||| ||| ||||||||||||  |||||| | || || ||  ||||||||||| ||
Sbjct: 537 caatcttcagccgccttgacctcagctgttgtcaagacaactgcttttgcttccttaaaa 478

                                                                       
Query: 265 tcaactgtagcagaagtaacctcgggctgactctcgagaatccgcttgacgctggcagcg 324
           ||||| || |||||||| || || || || ||||| | ||||||||| ||||| || |||
Sbjct: 477 tcaacggtggcagaagtgacttcaggttggctctccaaaatccgcttcacgctcgccgcg 418

                                                       
Query: 325 cacccgtcgcacatcatgccctgaacactgagcaagatggcctc 368
           ||||| ||||||||||| ||||| || ||||||| |||||||||
Sbjct: 417 cacccatcgcacatcatcccctggacgctgagcaggatggcctc 374
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>dbj|AK058506.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G01, full
           insert sequence
          Length = 877

 Score =  151 bits (76), Expect = 3e-33
 Identities = 187/224 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 cgagactcaaatccacaagtaccaagatgacttgcaagtttctctccacattgcttctgc 204
           ||||| ||||||||||| || || || ||| |||| |||||||||||||||||||| |||
Sbjct: 569 cgagattcaaatccacaggtgcccaggtgatttgccagtttctctccacattgcttttgc 510

                                                                       
Query: 205 caatcttctgccaccttgacctcaggagttgtccacacgacagcccttgcttccttataa 264
           |||||||| ||| ||||| ||||||  |||||| | || || ||  ||||||||||| ||
Sbjct: 509 caatcttcagccgccttggcctcagctgttgtcaagacaactgcttttgcttccttaaaa 450

                                                                       
Query: 265 tcaactgtagcagaagtaacctcgggctgactctcgagaatccgcttgacgctggcagcg 324
           ||||| || |||||||| || || || || ||||| | ||||||||| ||||| || |||
Sbjct: 449 tcaacggtggcagaagtgacttcaggttggctctccaaaatccgcttcacgctcgccgcg 390

                                                       
Query: 325 cacccgtcgcacatcatgccctgaacactgagcaagatggcctc 368
           ||||| ||||||||||| ||||| || ||||||| |||||||||
Sbjct: 389 cacccatcgcacatcatcccctggacgctgagcaggatggcctc 346
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  107 bits (54), Expect = 4e-20
 Identities = 126/150 (84%)
 Strand = Plus / Minus

                                                                            
Query: 132      tttaccttgtggacgagactcaaatccacaagtaccaagatgacttgcaagtttctctcc 191
                |||||||||  | ||||| ||||||||||| || || || ||| |||| |||||||||||
Sbjct: 25738194 tttaccttgaaggcgagattcaaatccacaggtgcccaggtgatttgccagtttctctcc 25738135

                                                                            
Query: 192      acattgcttctgccaatcttctgccaccttgacctcaggagttgtccacacgacagccct 251
                ||||||||| ||||||||||| ||| ||||||||||||  |||||| | || || ||  |
Sbjct: 25738134 acattgcttttgccaatcttcagccgccttgacctcagctgttgtcaagacaactgcttt 25738075

                                              
Query: 252      tgcttccttataatcaactgtagcagaagt 281
                |||||||||| ||||||| || ||||||||
Sbjct: 25738074 tgcttccttaaaatcaacggtggcagaagt 25738045



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                             
Query: 303      aatccgcttgacgctggcagcgcacccgtcgcacatcatgccctg 347
                ||||||||| ||||| || |||||||| ||||||||||| |||||
Sbjct: 25737317 aatccgcttcacgctcgccgcgcacccatcgcacatcatcccctg 25737273
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>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0524E08
          Length = 154696

 Score =  107 bits (54), Expect = 4e-20
 Identities = 126/150 (84%)
 Strand = Plus / Minus

                                                                         
Query: 132   tttaccttgtggacgagactcaaatccacaagtaccaagatgacttgcaagtttctctcc 191
             |||||||||  | ||||| ||||||||||| || || || ||| |||| |||||||||||
Sbjct: 55356 tttaccttgaaggcgagattcaaatccacaggtgcccaggtgatttgccagtttctctcc 55297

                                                                         
Query: 192   acattgcttctgccaatcttctgccaccttgacctcaggagttgtccacacgacagccct 251
             ||||||||| ||||||||||| ||| ||||||||||||  |||||| | || || ||  |
Sbjct: 55296 acattgcttttgccaatcttcagccgccttgacctcagctgttgtcaagacaactgcttt 55237

                                           
Query: 252   tgcttccttataatcaactgtagcagaagt 281
             |||||||||| ||||||| || ||||||||
Sbjct: 55236 tgcttccttaaaatcaacggtggcagaagt 55207



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                          
Query: 303   aatccgcttgacgctggcagcgcacccgtcgcacatcatgccctg 347
             ||||||||| ||||| || |||||||| ||||||||||| |||||
Sbjct: 54479 aatccgcttcacgctcgccgcgcacccatcgcacatcatcccctg 54435
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>dbj|AK099133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049J05, full
           insert sequence
          Length = 922

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                       
Query: 226 tcaggagttgtccacacgacagcccttgcttccttataatcaactgtagcagaagtaacc 285
           ||||| |||||||||||| ||||| ||  || || | | || ||||| ||||||||||||
Sbjct: 507 tcaggtgttgtccacacggcagccgtttttttctcaaagtcgactgtggcagaagtaacc 448

                                                    
Query: 286 tcgggctgactctcgagaatccgcttgacgctggcagcgca 326
           || ||||| ||||||||||||||||| ||||| || |||||
Sbjct: 447 tcaggctggctctcgagaatccgcttcacgctcgcggcgca 407
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>dbj|AK059680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-H07, full
           insert sequence
          Length = 978

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                       
Query: 226 tcaggagttgtccacacgacagcccttgcttccttataatcaactgtagcagaagtaacc 285
           ||||| |||||||||||| ||||| ||  || || | | || ||||| ||||||||||||
Sbjct: 534 tcaggtgttgtccacacggcagccgtttttttctcaaagtcgactgtggcagaagtaacc 475

                                                    
Query: 286 tcgggctgactctcgagaatccgcttgacgctggcagcgca 326
           || ||||| ||||||||||||||||| ||||| || |||||
Sbjct: 474 tcaggctggctctcgagaatccgcttcacgctcgcggcgca 434
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>gb|AE011943.1| Xanthomonas axonopodis pv. citri str. 306,  section 321 of 469 of the
            complete genome
          Length = 10029

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 397  gccgccgctgcggcggtgaccg 418
            ||||||||||||||||||||||
Sbjct: 8815 gccgccgctgcggcggtgaccg 8836
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>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete
             sequence
          Length = 137709

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 295   ctctcgagaatccgcttgacgctggcagcgca 326
             ||||||||||||||||| ||||| || |||||
Sbjct: 17561 ctctcgagaatccgcttcacgctcgcggcgca 17530
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>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 399     cgccgctgcggcggtgaccg 418
               ||||||||||||||||||||
Sbjct: 1618368 cgccgctgcggcggtgaccg 1618349
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 295      ctctcgagaatccgcttgacgctggcagcgca 326
                ||||||||||||||||| ||||| || |||||
Sbjct: 15319787 ctctcgagaatccgcttcacgctcgcggcgca 15319818
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>gb|AC127315.4| Mus musculus BAC clone RP23-218F21 from chromosome 8, complete sequence
          Length = 207577

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 232    gttgtccacacgacagccct 251
              ||||||||||||||||||||
Sbjct: 112594 gttgtccacacgacagccct 112575
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>gb|BC035516.1| Homo sapiens coiled-coil domain containing 71, mRNA (cDNA clone
           MGC:34190 IMAGE:5229681), complete cds
          Length = 1820

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 428 cgccgccgcggggacgcaagacgc 451
           ||||||||||||||| ||||||||
Sbjct: 52  cgccgccgcggggacccaagacgc 29
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>dbj|AK094432.1| Homo sapiens cDNA FLJ37113 fis, clone BRACE2021708
          Length = 2596

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 465  ggaagagaaggaaacggagg 484
            ||||||||||||||||||||
Sbjct: 1681 ggaagagaaggaaacggagg 1700
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>emb|CR610877.1| full-length cDNA clone CS0DI041YC15 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1743

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 428 cgccgccgcggggacgcaagacgc 451
           ||||||||||||||| ||||||||
Sbjct: 43  cgccgccgcggggacccaagacgc 20
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>emb|CR608073.1| full-length cDNA clone CS0DL002YD03 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1761

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 428 cgccgccgcggggacgcaagacgc 451
           ||||||||||||||| ||||||||
Sbjct: 61  cgccgccgcggggacccaagacgc 38
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>emb|CR608045.1| full-length cDNA clone CS0DJ001YB01 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1718

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 428 cgccgccgcggggacgcaagacgc 451
           ||||||||||||||| ||||||||
Sbjct: 33  cgccgccgcggggacccaagacgc 10
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>dbj|AK022862.1| Homo sapiens cDNA FLJ12800 fis, clone NT2RP2002079, weakly similar
           to HISTONE H1, GONADAL
          Length = 1782

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 428 cgccgccgcggggacgcaagacgc 451
           ||||||||||||||| ||||||||
Sbjct: 54  cgccgccgcggggacccaagacgc 31
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>ref|NM_022903.2| Homo sapiens coiled-coil domain containing 71 (CCDC71), mRNA
          Length = 1820

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 428 cgccgccgcggggacgcaagacgc 451
           ||||||||||||||| ||||||||
Sbjct: 52  cgccgccgcggggacccaagacgc 29
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>gb|AC155289.11| Mus musculus 6 BAC RP24-137B5 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 133835

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   tctctccacattgcttctgc 204
             ||||||||||||||||||||
Sbjct: 81318 tctctccacattgcttctgc 81299
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>gb|AC135506.3| Homo sapiens chromosome 3 clone RP11-694I15, complete sequence
          Length = 174363

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 428   cgccgccgcggggacgcaagacgc 451
             ||||||||||||||| ||||||||
Sbjct: 96571 cgccgccgcggggacccaagacgc 96594
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 295      ctctcgagaatccgcttgacgctggcagcgca 326
                ||||||||||||||||| ||||| || |||||
Sbjct: 15314321 ctctcgagaatccgcttcacgctcgcggcgca 15314352
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>gb|AC115914.6| Mus musculus chromosome 8, clone RP24-487J5, complete sequence
          Length = 163170

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 232    gttgtccacacgacagccct 251
              ||||||||||||||||||||
Sbjct: 152029 gttgtccacacgacagccct 152010
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>dbj|AK098658.1| Homo sapiens cDNA FLJ25792 fis, clone TST06958
          Length = 1657

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 428 cgccgccgcggggacgcaagacgc 451
           ||||||||||||||| ||||||||
Sbjct: 78  cgccgccgcggggacccaagacgc 55
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>ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@) on chromosome 22
          Length = 909203

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 465    ggaagagaaggaaacggagg 484
              ||||||||||||||||||||
Sbjct: 244018 ggaagagaaggaaacggagg 243999
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>emb|AL732559.9| Mouse DNA sequence from clone RP23-9A5 on chromosome 2, complete sequence
          Length = 167364

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    ctcaagcaatttatttacct 138
              ||||||||||||||||||||
Sbjct: 125908 ctcaagcaatttatttacct 125889
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>dbj|D87003.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:2H8
          Length = 43742

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 465  ggaagagaaggaaacggagg 484
            ||||||||||||||||||||
Sbjct: 4385 ggaagagaaggaaacggagg 4366
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>dbj|AP000897.6| Homo sapiens genomic DNA, chromosome 18, clone:RP11-678G15, complete
             sequence
          Length = 187987

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   actcaaatccacaagtacca 168
             ||||||||||||||||||||
Sbjct: 84894 actcaaatccacaagtacca 84875


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,010,946
Number of Sequences: 3902068
Number of extensions: 4010946
Number of successful extensions: 79298
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79170
Number of HSP's gapped (non-prelim): 123
length of query: 596
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 573
effective length of database: 17,143,297,704
effective search space: 9823109584392
effective search space used: 9823109584392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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