Clone Name | rbasd24j04 |
---|---|
Clone Library Name | barley_pub |
>PFA4_KLULA (Q6CUB5) Palmitoyltransferase PFA4 (EC 2.3.1.-) (Protein fatty| acyltransferase 4) Length = 377 Score = 32.3 bits (72), Expect = 1.0 Identities = 17/58 (29%), Positives = 23/58 (39%) Frame = +3 Query: 249 EWWKDHCTLIRWRFPKIARHAPASRSCIRVFENHCRVWT*N*SAVHMMLPGIANFAQW 422 E W ++C R P+ A H C+ ++HC WT N H P F W Sbjct: 74 EEWHNYCKKCRVYKPERAHHCKTCNQCVLAMDHHC-PWTLN-CVGHSNFPHFMRFLFW 129
>PFA4_ASHGO (Q75CB4) Palmitoyltransferase PFA4 (EC 2.3.1.-) (Protein fatty| acyltransferase 4) Length = 375 Score = 31.2 bits (69), Expect = 2.3 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +3 Query: 255 WKDHCTLIRWRFPKIARHAPASRSCIRVFENHCRVWT*N*SAVHMMLP 398 W+++CT P+ H C+ V ++HC WT N + + P Sbjct: 76 WQNYCTKCETYKPERTHHCKRCNQCVLVMDHHC-PWTMNCLGLQYLAP 122
>1A110_ARATH (Q9LQ10) Probable aminotransferase ACS10 (EC 2.6.1.-)| Length = 557 Score = 30.0 bits (66), Expect = 5.1 Identities = 23/68 (33%), Positives = 29/68 (42%) Frame = -1 Query: 343 SNTRMQLRLAGACLAILGNLHLINVQWSFHHSTRRKLYTAVIQMGHM*CRSTDILVAVMG 164 S + + CLA GN L+ S + K T V + H+ CRS D M Sbjct: 242 SGASSAIEILSFCLADSGNAFLVPTPCSPGYDRDVKWRTGV-DIIHVPCRSADNFNMSMV 300 Query: 163 FLDRAVYQ 140 LDRA YQ Sbjct: 301 VLDRAFYQ 308
>EFR1_CALJA (P61553) ERV-FRD provirus ancestral Env polyprotein precursor| (Envelope polyprotein) (Syncytin-2) [Contains: Surface protein (SU); Transmembrane protein (TM)] Length = 538 Score = 30.0 bits (66), Expect = 5.1 Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 2/99 (2%) Frame = +3 Query: 6 YSWASLLFSLVRVSWNALTNIHVNYSGLQPEPVISNQLFNNA--IVI**TALSRKPITAT 179 Y W L L+R++ + L+ + ++ ++ EP I +F N I I ++ K T Sbjct: 76 YQWDPNLKGLIRLANSLLSKVKQDFPDIRKEPPIFGPIFTNVNLIGIAPICVTAKRKDGT 135 Query: 180 RISVLRHHICPIWMTAVYSLRRVEWWKDHCTLIRWRFPK 296 + L +C + +T + + + + + + RFPK Sbjct: 136 NVGTLPSTVCNVTLTVDPNQQTYQKYAHNQFHHQPRFPK 174
>CLTR2_MOUSE (Q920A1) Cysteinyl leukotriene receptor 2 (CysLTR2)| Length = 309 Score = 29.3 bits (64), Expect = 8.7 Identities = 18/64 (28%), Positives = 29/64 (45%) Frame = +3 Query: 150 ALSRKPITATRISVLRHHICPIWMTAVYSLRRVEWWKDHCTLIRWRFPKIARHAPASRSC 329 A RK +T I+++ +C + A+ +L V W KD C + + I A+ SC Sbjct: 224 AAHRKALTTIVIAMITFLLCFLPYHALRTLHLVTWDKDSCGDVLHKATVITLTMAAANSC 283 Query: 330 IRVF 341 F Sbjct: 284 FNPF 287 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,853,807 Number of Sequences: 219361 Number of extensions: 2252589 Number of successful extensions: 5436 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 5215 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5428 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)