>ref|NM_189847.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1644

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 392  gttgccaggcattgccaacttcgcgcaatggaggtggccgctggggcctc 441
            ||||| |||||||||||||||| || ||||||||||||| ||||||||||
Sbjct: 1345 gttgcgaggcattgccaacttcacggaatggaggtggcctctggggcctc 1296



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 157  cgaggaaacccattactgccaccagaatatctgtactgcggcatcacatat 207
            |||||||| ||||| || ||||||||||||||| |||| ||||||||||||
Sbjct: 1640 cgaggaaaaccattgctaccaccagaatatctgaactgtggcatcacatat 1590

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                  
Query: 392      gttgccaggcattgccaacttcgcgcaatggaggtggccgctggggcctc 441
                ||||| |||||||||||||||| || ||||||||||||| ||||||||||
Sbjct: 25558942 gttgcgaggcattgccaacttcacggaatggaggtggcctctggggcctc 25558991



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                        
Query: 152      cctatcgaggaaacccattactgccaccagaatatctgtactgcggcatcacatat 207
                |||| |||||||| ||||| || ||||||||||||||| |||| ||||||||||||
Sbjct: 25558642 cctaccgaggaaaaccattgctaccaccagaatatctgaactgtggcatcacatat 25558697

>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0594D10
          Length = 143200

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                               
Query: 392   gttgccaggcattgccaacttcgcgcaatggaggtggccgctggggcctc 441
             ||||| |||||||||||||||| || ||||||||||||| ||||||||||
Sbjct: 12915 gttgcgaggcattgccaacttcacggaatggaggtggcctctggggcctc 12964



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                     
Query: 152   cctatcgaggaaacccattactgccaccagaatatctgtactgcggcatcacatat 207
             |||| |||||||| ||||| || ||||||||||||||| |||| ||||||||||||
Sbjct: 12615 cctaccgaggaaaaccattgctaccaccagaatatctgaactgtggcatcacatat 12670

>dbj|AP004309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0560B08
          Length = 128098

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                               
Query: 392   gttgccaggcattgccaacttcgcgcaatggaggtggccgctggggcctc 441
             ||||| |||||||||||||||| || ||||||||||||| ||||||||||
Sbjct: 96212 gttgcgaggcattgccaacttcacggaatggaggtggcctctggggcctc 96261



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                     
Query: 152   cctatcgaggaaacccattactgccaccagaatatctgtactgcggcatcacatat 207
             |||| |||||||| ||||| || ||||||||||||||| |||| ||||||||||||
Sbjct: 95912 cctaccgaggaaaaccattgctaccaccagaatatctgaactgtggcatcacatat 95967

>gb|AC113063.8| Mus musculus chromosome 15, clone RP23-261F24, complete sequence
          Length = 218490

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 354    agggtttggacatgaaattga 374
              |||||||||||||||||||||
Sbjct: 136964 agggtttggacatgaaattga 136984

>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 524    actgatcatgattgccaccga 544
              |||||||||||||||||||||
Sbjct: 607827 actgatcatgattgccaccga 607807

>emb|CR356234.11| Zebrafish DNA sequence from clone CH211-93J11 in linkage group 2,
              complete sequence
          Length = 151567

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 47     ttggaatgccctcacaaacat 67
              |||||||||||||||||||||
Sbjct: 132226 ttggaatgccctcacaaacat 132206

>emb|AL445649.15| Human DNA sequence from clone RP11-381O6 on chromosome 13, complete
              sequence
          Length = 190126

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 77     ttacagtggtctccaaccagaacca 101
              |||||| ||||||||||||||||||
Sbjct: 158951 ttacaggggtctccaaccagaacca 158975

>gb|AC163100.4| Mus musculus chromosome 15, clone RP23-404G8, complete sequence
          Length = 199486

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 354    agggtttggacatgaaattga 374
              |||||||||||||||||||||
Sbjct: 173921 agggtttggacatgaaattga 173901

>gb|AC160825.3| Xenopus tropicalis clone ISB1-168O21, complete sequence
          Length = 102150

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 119   gttcaacaatgcaattgtcat 139
             |||||||||||||||||||||
Sbjct: 73666 gttcaacaatgcaattgtcat 73646

>gb|AC157095.9| Mus musculus 6 BAC RP24-350P11 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 177800

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 179    cagaatatctgtactgcggca 199
              |||||||||||||||||||||
Sbjct: 117351 cagaatatctgtactgcggca 117331

>gb|AC164110.4| Mus musculus BAC clone RP23-307N19 from chromosome 12, complete
             sequence
          Length = 201050

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 391   tgttgccaggcattgccaac 410
             ||||||||||||||||||||
Sbjct: 21301 tgttgccaggcattgccaac 21282

>gb|AF131866.2| Mus musculus chromosome X clone CT7-271B7 map qA7.1, complete
           sequence
          Length = 110310

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 aattgttcaacaatgcaatt 134
           ||||||||||||||||||||
Sbjct: 833 aattgttcaacaatgcaatt 814

>gb|AC124212.2| Mus musculus chromosome X clone CT7-532E7 map qA7.1, complete sequence
          Length = 109783

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   aattgttcaacaatgcaatt 134
             ||||||||||||||||||||
Sbjct: 84794 aattgttcaacaatgcaatt 84775

>gb|AC134596.3| Mus musculus BAC clone RP23-435C1 from chromosome 12, complete sequence
          Length = 193068

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 391   tgttgccaggcattgccaac 410
             ||||||||||||||||||||
Sbjct: 86918 tgttgccaggcattgccaac 86937

>emb|AL591503.9| Human DNA sequence from clone RP11-571E6 on chromosome Xp11.22-11.3
             Contains a nicolin 1 (NICN1) pseudogene, a novel gene, the
             5'end of the ZNF157 gene for zinc finger protein 157
             (HZF22) and a UBX domain containing 2 (UBXD2) pseudogene,
             complete sequence
          Length = 152659

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    tccacgtcaattacagtggt 86
             ||||||||||||||||||||
Sbjct: 46595 tccacgtcaattacagtggt 46576

>emb|Z70678.1|SCXV55KB S.cerevisiae chromosome XV DNA, 54.7 kb region
          Length = 54719

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 115   aattgttcaacaatgcaattgtca 138
             |||||||||| |||||||||||||
Sbjct: 43122 aattgttcaaaaatgcaattgtca 43145

>gb|J02706.1|YSCTIMP1A Saccharomyces cerevisiae thymidylate synthase (TIMP1) gene, complete
            cds
          Length = 1813

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 115  aattgttcaacaatgcaattgtca 138
            |||||||||| |||||||||||||
Sbjct: 1799 aattgttcaaaaatgcaattgtca 1776

>emb|BX914216.14| Zebrafish DNA sequence from clone RP71-25N17 in linkage group 18,
             complete sequence
          Length = 72914

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   aattgtcatctgataaactg 150
             ||||||||||||||||||||
Sbjct: 20603 aattgtcatctgataaactg 20584

>gb|AC092630.3| Homo sapiens BAC clone RP11-321C18 from 2, complete sequence
          Length = 185947

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    accagaaccagtgatcagta 111
             ||||||||||||||||||||
Sbjct: 34761 accagaaccagtgatcagta 34742

>gb|AC026358.36| Homo sapiens 12 BAC RP11-522N14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 146128

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   tgcaattgtcatctgataaa 147
             ||||||||||||||||||||
Sbjct: 34230 tgcaattgtcatctgataaa 34249

>gb|AF500299.1| Python curtus endogenous retrovirus Gag-Pro-Pol protein gene, partial
            cds
          Length = 2829

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 245  agttgaatggtggaaagacc 264
            ||||||||||||||||||||
Sbjct: 1861 agttgaatggtggaaagacc 1842

>gb|AF500296.1| Python molurus endogenous retrovirus Gag-Pro-Pol protein and Env
            genes, complete cds
          Length = 7050

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 245  agttgaatggtggaaagacc 264
            ||||||||||||||||||||
Sbjct: 3200 agttgaatggtggaaagacc 3181

>emb|BX908395.15| Zebrafish DNA sequence from clone DKEY-242H9 in linkage group 18,
             complete sequence
          Length = 130348

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   aattgtcatctgataaactg 150
             ||||||||||||||||||||
Sbjct: 60119 aattgtcatctgataaactg 60138

>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 317     cagccggagctgcattcggg 336
               ||||||||||||||||||||
Sbjct: 1833831 cagccggagctgcattcggg 1833850

>emb|Z74981.1|SCYOR073W S.cerevisiae chromosome XV reading frame ORF YOR073w
          Length = 4858

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 115  aattgttcaacaatgcaattgtca 138
            |||||||||| |||||||||||||
Sbjct: 4474 aattgttcaaaaatgcaattgtca 4497

>gb|AC122448.3| Mus musculus BAC clone RP24-243B16 from 15, complete sequence
          Length = 159923

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 521    caaactgatcatgattgcca 540
              ||||||||||||||||||||
Sbjct: 156644 caaactgatcatgattgcca 156663

>emb|AL807816.7| Mouse DNA sequence from clone RP23-13H12 on chromosome X, complete
             sequence
          Length = 193219

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   aattgttcaacaatgcaatt 134
             ||||||||||||||||||||
Sbjct: 20074 aattgttcaacaatgcaatt 20055

>dbj|AP000350.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1125A3
          Length = 162328

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 482   aagcctgcgggtaagaagctgaac 505
             ||||||||||| ||||||||||||
Sbjct: 43799 aagcctgcggggaagaagctgaac 43822


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,984,078
Number of Sequences: 3902068
Number of extensions: 4984078
Number of successful extensions: 80200
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80072
Number of HSP's gapped (non-prelim): 128
length of query: 586
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 563
effective length of database: 17,143,297,704
effective search space: 9651676607352
effective search space used: 9651676607352
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)