>RNS1_ARATH (P42813) Ribonuclease 1 precursor (EC 3.1.27.1)|
          Length = 230

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -3

Query: 354 IQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEILFHPF 214
           ++C++      QLYQ+++CV      LIECP      C  EI F  F
Sbjct: 184 VECNRDGSGNSQLYQVYLCVDRSGSGLIECPVFPHGKCGAEIEFPSF 230

>RNS3_ARATH (P42815) Ribonuclease 3 precursor (EC 3.1.27.1)|
          Length = 222

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -3

Query: 354 IQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEILFHPF 214
           I+C+K      QLYQI++CV   A   I CP      C   + F  F
Sbjct: 176 IECNKDSSHNSQLYQIYLCVDTSASKFINCPVMPHGRCDSRVQFPKF 222

>RNLE_LYCES (P80022) Extracellular ribonuclease LE precursor (EC 3.1.27.1)|
           (RNase LE)
          Length = 230

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = -3

Query: 354 IQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEILFHPF 214
           IQC+       QLYQ++ICV     +LIECP      C   I F  F
Sbjct: 184 IQCNVDQSGNSQLYQVYICVDGSGSSLIECPIFPGGKCGTSIEFPTF 230

>RNLX_LYCES (P80196) Intracellular ribonuclease LX precursor (EC 3.1.27.1)|
           (RNase LX)
          Length = 237

 Score = 34.7 bits (78), Expect = 0.059
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 354 IQCSKGPFDKFQLYQIFICVAEDAKTLIECP-KPQKFTCSDEILFHPF 214
           I+C+       QLYQ+++CV   A   I+CP  P    C  +I F  F
Sbjct: 181 IECNVDSQGNHQLYQVYLCVDSSASKFIDCPIFPHGGKCGSKIEFPSF 228

>RNDI_DICDI (Q7M438) Ribonuclease DdI precursor (EC 3.1.27.1) (RNase DdI)|
          Length = 223

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = -3

Query: 354 IQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEILF 223
           IQCS G     QL  + +C+ +++ ++++CP  Q ++CS  + F
Sbjct: 181 IQCSSG-----QLSTVAVCIDKNSLSIMDCPDLQGWSCSGSVKF 219

>RYR1_PIG (P16960) Ryanodine receptor 1 (Skeletal muscle-type ryanodine|
            receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release
            channel)
          Length = 5035

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +3

Query: 30   KEHNSMHILVRINYSLERNPQDEA*SATNLQL*LSIPWRRRPSQMLRQRTRR 185
            K+ N M +   +  S  +NP  +      +Q+ + + W R P+  LR  TRR
Sbjct: 1568 KQKNIMPLSAAMFLSERKNPAPQCPPRLEMQMLMPVSWSRMPNHFLRVETRR 1619

>RYR1_HUMAN (P21817) Ryanodine receptor 1 (Skeletal muscle-type ryanodine|
            receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release
            channel)
          Length = 5038

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 30   KEHNSMHILVRINYSLERNPQDEA*SATNLQL*LSIPWRRRPSQMLRQRTRR 185
            K+ N M +   +  S  +NP  +      +Q+ + + W R P+  L+  TRR
Sbjct: 1567 KQKNIMPLSAAMFQSERKNPAPQCPPRLEMQMLMPVSWSRMPNHFLQVETRR 1618

>DDX41_MOUSE (Q91VN6) Probable ATP-dependent RNA helicase DDX41 (EC 3.6.1.-)|
           (DEAD box protein 41)
          Length = 622

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = -2

Query: 178 VLCRSI*DGRRRHGILSYSCRLVADQASSCGLRSNE*LIRTSICMELCSFLFQM 17
           ++C S    R+ HGIL Y CRL+ + +S         L+R ++C+   S   QM
Sbjct: 262 IICPSRELARQTHGILEYYCRLLQEDSSP--------LLRCALCIGGMSVKEQM 307

>DDX41_HUMAN (Q9UJV9) Probable ATP-dependent RNA helicase DDX41 (EC 3.6.1.-)|
           (DEAD box protein 41) (DEAD box protein abstrakt
           homolog)
          Length = 622

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = -2

Query: 178 VLCRSI*DGRRRHGILSYSCRLVADQASSCGLRSNE*LIRTSICMELCSFLFQM 17
           ++C S    R+ HGIL Y CRL+ + +S         L+R ++C+   S   QM
Sbjct: 262 IICPSRELARQTHGILEYYCRLLQEDSSP--------LLRCALCIGGMSVKEQM 307

>RYR1_RABIT (P11716) Ryanodine receptor 1 (Skeletal muscle-type ryanodine|
            receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release
            channel)
          Length = 5037

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 30   KEHNSMHILVRINYSLERNPQDEA*SATNLQL*LSIPWRRRPSQMLRQRTRR 185
            K+ N M +   +  S  +NP  +      +Q+ + + W R P+  L+  TRR
Sbjct: 1568 KQKNIMPLSAAMFLSERKNPAPQCPPRLEVQMLMPVSWSRMPNHFLQVETRR 1619

>RNMC_MOMCH (P23540) Ribonuclease MC (EC 3.1.27.1) (RNase MC)|
          Length = 191

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -3

Query: 354 IQCSKGPFDKFQ-LYQIFICVAEDAKTLIECPKPQKFTCSDEILF 223
           ++C   P  K   L Q+  C A+D  TLI+C +    TC    +F
Sbjct: 150 LRCRTDPQTKVSYLVQVVACFAQDGSTLIDCTRD---TCGANFIF 191

>RNS7_NICAL (Q40381) Ribonuclease S-7 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 7) (S7-RNase)
          Length = 218

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = -3

Query: 354 IQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQ--KFTCSDEILF 223
           + C+KG  +   L +I IC     K +I CP P+  K T S+EI F
Sbjct: 175 LSCTKGIME---LVEIGICFDSMVKNVINCPHPKTCKPTGSNEIKF 217

>RNS6_NICAL (Q40379) Ribonuclease S-6 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 6) (S6-RNase)
          Length = 215

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 354 IQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTC 241
           + C+KG     +L+ + IC    AK +I+CP P+  TC
Sbjct: 173 LSCTKGQ----ELWFVGICFDSTAKNVIDCPNPK--TC 204

>XERC_CORGL (Q8NNZ9) Tyrosine recombinase xerC|
          Length = 308

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = +2

Query: 164 ASAKDTEDAACFSIHFLKGWKRISSEHVNFCGFGHSMSVLASSATQMKIWYSWNLSNGPL 343
           A A   ED   FS+  L+ W  I+ +       G S + LA     +K + SW   NG L
Sbjct: 53  AMADTIEDIDNFSLPTLRQWLGIAVDE------GKSRATLARRTASVKAFSSWAQKNGHL 106

>RNS11_NICAL (Q7SID5) Ribonuclease S-F11 (EC 3.1.27.1) (Stylar glycoprotein F11)|
           (SF11-RNase)
          Length = 196

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = -3

Query: 354 IQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEILF 223
           I+C++      +LY+I IC   +A ++  CP+      + ++LF
Sbjct: 151 IKCAEVTKGTPELYEIGICFTPNADSMFRCPQSDTCDKTAKVLF 194

>GMIP_HUMAN (Q9P107) GEM-interacting protein (GMIP)|
          Length = 970

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = -2

Query: 301  LRGRGRQNAHRVPETAEVHVLRRDPLPPLQEVDAKAGRVLRVL 173
            LRGRG   A   PE +    LRR PLP   E+  +  R+L  L
Sbjct: 908  LRGRGPSPAAASPEGSP---LRRTPLPKHFEITQETARLLSKL 947


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,428,369
Number of Sequences: 219361
Number of extensions: 755356
Number of successful extensions: 2113
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2113
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)