Clone Name | rbasd24j03 |
---|---|
Clone Library Name | barley_pub |
>gb|AF182197.1|AF182197 Hordeum vulgare RNase S-like protein precursor (rsh1) gene, complete cds Length = 3758 Score = 692 bits (349), Expect = 0.0 Identities = 356/357 (99%), Gaps = 1/357 (0%) Strand = Plus / Minus Query: 1 acacgagcgagatgaacatctgaaaaa-ggaaagaacataattccatgcatatactagta 59 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3312 acacgagcgagatgaacatctgaaaaaaggaaagaacataattccatgcatatactagta 3253 Query: 60 cgtattaattattcattggaacgcaacccacaagacgaggcctgatcggctaccaatctg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3252 cgtattaattattcattggaacgcaacccacaagacgaggcctgatcggctaccaatctg 3193 Query: 120 cagctgtagctcagtatcccatggcggcgccggccatctcaaatgcttcggcaaaggaca 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3192 cagctgtagctcagtatcccatggcggcgccggccatctcaaatgcttcggcaaaggaca 3133 Query: 180 cggaggacgcggcctgctttagcatccacttcttgaaggggtggaagaggatctcgtcgg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3132 cggaggacgcggcctgctttagcatccacttcttgaaggggtggaagaggatctcgtcgg 3073 Query: 240 agcacgtgaacttctgcggtttcgggcactcgatgagcgttttggcgtcctcggccacgc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3072 agcacgtgaacttctgcggtttcgggcactcgatgagcgttttggcgtcctcggccacgc 3013 Query: 300 agatgaagatctggtacagctggaacttatcgaacggccctttgctacactggatca 356 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3012 agatgaagatctggtacagctggaacttatcgaacggccctttgctacactggatca 2956 Score = 216 bits (109), Expect = 4e-53 Identities = 133/141 (94%) Strand = Plus / Minus Query: 127 agctcagtatcccatggcggcgccggccatctcaaatgcttcggcaaaggacacggagga 186 ||||||||||||||||||||||||||||||||| |||||||| || ||||||| ||||| Sbjct: 3754 agctcagtatcccatggcggcgccggccatctcgaatgcttcagcgtaggacaccgagga 3695 Query: 187 cgcggcctgctttagcatccacttcttgaaggggtggaagaggatctcgtcggagcacgt 246 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 3694 cgcggactgctttagcatccacttcttgaaggggtggaagatgatctcgtcggagcacgt 3635 Query: 247 gaacttctgcggtttcgggca 267 |||||| |||||||||||||| Sbjct: 3634 gaacttttgcggtttcgggca 3614
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 83.8 bits (42), Expect = 4e-13 Identities = 131/160 (81%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 200 agcatccacttcttgaaggggtggaagaggatctcgtcggagcacgtgaac---ttctgc 256 ||||||||||||||||| |||||||||||||| |||||| ||| ||| || ||| | Sbjct: 20864227 agcatccacttcttgaaagggtggaagaggatgtcgtcgccgcaggtgtacggcttcctc 20864286 Query: 257 ggtttcgggcactcgatgagcgttttggcgtcctcggccacgcagatgaagatctggtac 316 || | |||||||| | || ||| ||||||||||| || ||||||| | | |||||||| Sbjct: 20864287 gggctggggcactccacgaacgtcttggcgtcctccgcgacgcagacgtatatctggtat 20864346 Query: 317 agctggaacttatcgaacggccctttgctacactggatca 356 ||||||||||| | |||||| || ||||| |||||||||| Sbjct: 20864347 agctggaacttgttgaacgggcccttgctgcactggatca 20864386
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 83.8 bits (42), Expect = 4e-13 Identities = 131/160 (81%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 200 agcatccacttcttgaaggggtggaagaggatctcgtcggagcacgtgaac---ttctgc 256 ||||||||||||||||| |||||||||||||| |||||| ||| ||| || ||| | Sbjct: 56453 agcatccacttcttgaaagggtggaagaggatgtcgtcgccgcaggtgtacggcttcctc 56512 Query: 257 ggtttcgggcactcgatgagcgttttggcgtcctcggccacgcagatgaagatctggtac 316 || | |||||||| | || ||| ||||||||||| || ||||||| | | |||||||| Sbjct: 56513 gggctggggcactccacgaacgtcttggcgtcctccgcgacgcagacgtatatctggtat 56572 Query: 317 agctggaacttatcgaacggccctttgctacactggatca 356 ||||||||||| | |||||| || ||||| |||||||||| Sbjct: 56573 agctggaacttgttgaacgggcccttgctgcactggatca 56612
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 83.8 bits (42), Expect = 4e-13 Identities = 131/160 (81%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 200 agcatccacttcttgaaggggtggaagaggatctcgtcggagcacgtgaac---ttctgc 256 ||||||||||||||||| |||||||||||||| |||||| ||| ||| || ||| | Sbjct: 139256 agcatccacttcttgaaagggtggaagaggatgtcgtcgccgcaggtgtacggcttcctc 139315 Query: 257 ggtttcgggcactcgatgagcgttttggcgtcctcggccacgcagatgaagatctggtac 316 || | |||||||| | || ||| ||||||||||| || ||||||| | | |||||||| Sbjct: 139316 gggctggggcactccacgaacgtcttggcgtcctccgcgacgcagacgtatatctggtat 139375 Query: 317 agctggaacttatcgaacggccctttgctacactggatca 356 ||||||||||| | |||||| || ||||| |||||||||| Sbjct: 139376 agctggaacttgttgaacgggcccttgctgcactggatca 139415
>dbj|AK109411.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E09, full insert sequence Length = 1114 Score = 83.8 bits (42), Expect = 4e-13 Identities = 131/160 (81%), Gaps = 3/160 (1%) Strand = Plus / Minus Query: 200 agcatccacttcttgaaggggtggaagaggatctcgtcggagcacgtgaac---ttctgc 256 ||||||||||||||||| |||||||||||||| |||||| ||| ||| || ||| | Sbjct: 772 agcatccacttcttgaaagggtggaagaggatgtcgtcgccgcaggtgtacggcttcctc 713 Query: 257 ggtttcgggcactcgatgagcgttttggcgtcctcggccacgcagatgaagatctggtac 316 || | |||||||| | || ||| ||||||||||| || ||||||| | | |||||||| Sbjct: 712 gggctggggcactccacgaacgtcttggcgtcctccgcgacgcagacgtatatctggtat 653 Query: 317 agctggaacttatcgaacggccctttgctacactggatca 356 ||||||||||| | |||||| || ||||| |||||||||| Sbjct: 652 agctggaacttgttgaacgggcccttgctgcactggatca 613
>dbj|AK119171.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H08, full insert sequence Length = 1096 Score = 83.8 bits (42), Expect = 4e-13 Identities = 131/160 (81%), Gaps = 3/160 (1%) Strand = Plus / Minus Query: 200 agcatccacttcttgaaggggtggaagaggatctcgtcggagcacgtgaac---ttctgc 256 ||||||||||||||||| |||||||||||||| |||||| ||| ||| || ||| | Sbjct: 771 agcatccacttcttgaaagggtggaagaggatgtcgtcgccgcaggtgtacggcttcctc 712 Query: 257 ggtttcgggcactcgatgagcgttttggcgtcctcggccacgcagatgaagatctggtac 316 || | |||||||| | || ||| ||||||||||| || ||||||| | | |||||||| Sbjct: 711 gggctggggcactccacgaacgtcttggcgtcctccgcgacgcagacgtatatctggtat 652 Query: 317 agctggaacttatcgaacggccctttgctacactggatca 356 ||||||||||| | |||||| || ||||| |||||||||| Sbjct: 651 agctggaacttgttgaacgggcccttgctgcactggatca 612
>dbj|AK104648.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H05, full insert sequence Length = 1114 Score = 83.8 bits (42), Expect = 4e-13 Identities = 131/160 (81%), Gaps = 3/160 (1%) Strand = Plus / Minus Query: 200 agcatccacttcttgaaggggtggaagaggatctcgtcggagcacgtgaac---ttctgc 256 ||||||||||||||||| |||||||||||||| |||||| ||| ||| || ||| | Sbjct: 772 agcatccacttcttgaaagggtggaagaggatgtcgtcgccgcaggtgtacggcttcctc 713 Query: 257 ggtttcgggcactcgatgagcgttttggcgtcctcggccacgcagatgaagatctggtac 316 || | |||||||| | || ||| ||||||||||| || ||||||| | | |||||||| Sbjct: 712 gggctggggcactccacgaacgtcttggcgtcctccgcgacgcagacgtatatctggtat 653 Query: 317 agctggaacttatcgaacggccctttgctacactggatca 356 ||||||||||| | |||||| || ||||| |||||||||| Sbjct: 652 agctggaacttgttgaacgggcccttgctgcactggatca 613
>dbj|AK104456.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A10, full insert sequence Length = 1077 Score = 83.8 bits (42), Expect = 4e-13 Identities = 131/160 (81%), Gaps = 3/160 (1%) Strand = Plus / Minus Query: 200 agcatccacttcttgaaggggtggaagaggatctcgtcggagcacgtgaac---ttctgc 256 ||||||||||||||||| |||||||||||||| |||||| ||| ||| || ||| | Sbjct: 767 agcatccacttcttgaaagggtggaagaggatgtcgtcgccgcaggtgtacggcttcctc 708 Query: 257 ggtttcgggcactcgatgagcgttttggcgtcctcggccacgcagatgaagatctggtac 316 || | |||||||| | || ||| ||||||||||| || ||||||| | | |||||||| Sbjct: 707 gggctggggcactccacgaacgtcttggcgtcctccgcgacgcagacgtatatctggtat 648 Query: 317 agctggaacttatcgaacggccctttgctacactggatca 356 ||||||||||| | |||||| || ||||| |||||||||| Sbjct: 647 agctggaacttgttgaacgggcccttgctgcactggatca 608
>dbj|AK104390.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-H04, full insert sequence Length = 1085 Score = 83.8 bits (42), Expect = 4e-13 Identities = 131/160 (81%), Gaps = 3/160 (1%) Strand = Plus / Minus Query: 200 agcatccacttcttgaaggggtggaagaggatctcgtcggagcacgtgaac---ttctgc 256 ||||||||||||||||| |||||||||||||| |||||| ||| ||| || ||| | Sbjct: 772 agcatccacttcttgaaagggtggaagaggatgtcgtcgccgcaggtgtacggcttcctc 713 Query: 257 ggtttcgggcactcgatgagcgttttggcgtcctcggccacgcagatgaagatctggtac 316 || | |||||||| | || ||| ||||||||||| || ||||||| | | |||||||| Sbjct: 712 gggctggggcactccacgaacgtcttggcgtcctccgcgacgcagacgtatatctggtat 653 Query: 317 agctggaacttatcgaacggccctttgctacactggatca 356 ||||||||||| | |||||| || ||||| |||||||||| Sbjct: 652 agctggaacttgttgaacgggcccttgctgcactggatca 613
>dbj|AK104263.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D05, full insert sequence Length = 1114 Score = 83.8 bits (42), Expect = 4e-13 Identities = 131/160 (81%), Gaps = 3/160 (1%) Strand = Plus / Minus Query: 200 agcatccacttcttgaaggggtggaagaggatctcgtcggagcacgtgaac---ttctgc 256 ||||||||||||||||| |||||||||||||| |||||| ||| ||| || ||| | Sbjct: 772 agcatccacttcttgaaagggtggaagaggatgtcgtcgccgcaggtgtacggcttcctc 713 Query: 257 ggtttcgggcactcgatgagcgttttggcgtcctcggccacgcagatgaagatctggtac 316 || | |||||||| | || ||| ||||||||||| || ||||||| | | |||||||| Sbjct: 712 gggctggggcactccacgaacgtcttggcgtcctccgcgacgcagacgtatatctggtat 653 Query: 317 agctggaacttatcgaacggccctttgctacactggatca 356 ||||||||||| | |||||| || ||||| |||||||||| Sbjct: 652 agctggaacttgttgaacgggcccttgctgcactggatca 613
>dbj|AK104261.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-B09, full insert sequence Length = 1140 Score = 83.8 bits (42), Expect = 4e-13 Identities = 131/160 (81%), Gaps = 3/160 (1%) Strand = Plus / Minus Query: 200 agcatccacttcttgaaggggtggaagaggatctcgtcggagcacgtgaac---ttctgc 256 ||||||||||||||||| |||||||||||||| |||||| ||| ||| || ||| | Sbjct: 772 agcatccacttcttgaaagggtggaagaggatgtcgtcgccgcaggtgtacggcttcctc 713 Query: 257 ggtttcgggcactcgatgagcgttttggcgtcctcggccacgcagatgaagatctggtac 316 || | |||||||| | || ||| ||||||||||| || ||||||| | | |||||||| Sbjct: 712 gggctggggcactccacgaacgtcttggcgtcctccgcgacgcagacgtatatctggtat 653 Query: 317 agctggaacttatcgaacggccctttgctacactggatca 356 ||||||||||| | |||||| || ||||| |||||||||| Sbjct: 652 agctggaacttgttgaacgggcccttgctgcactggatca 613
>dbj|AK104237.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H08, full insert sequence Length = 1173 Score = 83.8 bits (42), Expect = 4e-13 Identities = 131/160 (81%), Gaps = 3/160 (1%) Strand = Plus / Minus Query: 200 agcatccacttcttgaaggggtggaagaggatctcgtcggagcacgtgaac---ttctgc 256 ||||||||||||||||| |||||||||||||| |||||| ||| ||| || ||| | Sbjct: 772 agcatccacttcttgaaagggtggaagaggatgtcgtcgccgcaggtgtacggcttcctc 713 Query: 257 ggtttcgggcactcgatgagcgttttggcgtcctcggccacgcagatgaagatctggtac 316 || | |||||||| | || ||| ||||||||||| || ||||||| | | |||||||| Sbjct: 712 gggctggggcactccacgaacgtcttggcgtcctccgcgacgcagacgtatatctggtat 653 Query: 317 agctggaacttatcgaacggccctttgctacactggatca 356 ||||||||||| | |||||| || ||||| |||||||||| Sbjct: 652 agctggaacttgttgaacgggcccttgctgcactggatca 613
>dbj|AK061442.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-C07, full insert sequence Length = 1151 Score = 83.8 bits (42), Expect = 4e-13 Identities = 131/160 (81%), Gaps = 3/160 (1%) Strand = Plus / Minus Query: 200 agcatccacttcttgaaggggtggaagaggatctcgtcggagcacgtgaac---ttctgc 256 ||||||||||||||||| |||||||||||||| |||||| ||| ||| || ||| | Sbjct: 772 agcatccacttcttgaaagggtggaagaggatgtcgtcgccgcaggtgtacggcttcctc 713 Query: 257 ggtttcgggcactcgatgagcgttttggcgtcctcggccacgcagatgaagatctggtac 316 || | |||||||| | || ||| ||||||||||| || ||||||| | | |||||||| Sbjct: 712 gggctggggcactccacgaacgtcttggcgtcctccgcgacgcagacgtatatctggtat 653 Query: 317 agctggaacttatcgaacggccctttgctacactggatca 356 ||||||||||| | |||||| || ||||| |||||||||| Sbjct: 652 agctggaacttgttgaacgggcccttgctgcactggatca 613
>dbj|AK060036.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A10, full insert sequence Length = 1127 Score = 83.8 bits (42), Expect = 4e-13 Identities = 131/160 (81%), Gaps = 3/160 (1%) Strand = Plus / Minus Query: 200 agcatccacttcttgaaggggtggaagaggatctcgtcggagcacgtgaac---ttctgc 256 ||||||||||||||||| |||||||||||||| |||||| ||| ||| || ||| | Sbjct: 748 agcatccacttcttgaaagggtggaagaggatgtcgtcgccgcaggtgtacggcttcctc 689 Query: 257 ggtttcgggcactcgatgagcgttttggcgtcctcggccacgcagatgaagatctggtac 316 || | |||||||| | || ||| ||||||||||| || ||||||| | | |||||||| Sbjct: 688 gggctggggcactccacgaacgtcttggcgtcctccgcgacgcagacgtatatctggtat 629 Query: 317 agctggaacttatcgaacggccctttgctacactggatca 356 ||||||||||| | |||||| || ||||| |||||||||| Sbjct: 628 agctggaacttgttgaacgggcccttgctgcactggatca 589
>dbj|AK059757.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-D06, full insert sequence Length = 1173 Score = 83.8 bits (42), Expect = 4e-13 Identities = 131/160 (81%), Gaps = 3/160 (1%) Strand = Plus / Minus Query: 200 agcatccacttcttgaaggggtggaagaggatctcgtcggagcacgtgaac---ttctgc 256 ||||||||||||||||| |||||||||||||| |||||| ||| ||| || ||| | Sbjct: 772 agcatccacttcttgaaagggtggaagaggatgtcgtcgccgcaggtgtacggcttcctc 713 Query: 257 ggtttcgggcactcgatgagcgttttggcgtcctcggccacgcagatgaagatctggtac 316 || | |||||||| | || ||| ||||||||||| || ||||||| | | |||||||| Sbjct: 712 gggctggggcactccacgaacgtcttggcgtcctccgcgacgcagacgtatatctggtat 653 Query: 317 agctggaacttatcgaacggccctttgctacactggatca 356 ||||||||||| | |||||| || ||||| |||||||||| Sbjct: 652 agctggaacttgttgaacgggcccttgctgcactggatca 613
>gb|AY104404.1| Zea mays PCO098786 mRNA sequence Length = 1018 Score = 83.8 bits (42), Expect = 4e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 193 ctgctttagcatccacttcttgaaggggtggaagaggatctcgtcggagcacgtgaactt 252 |||||| ||||||||||||||||||||||||||||||||||| | |||||| ||| ||| Sbjct: 729 ctgcttgagcatccacttcttgaaggggtggaagaggatctccttggagcaggtgtactg 670 Query: 253 ctgcgg 258 |||||| Sbjct: 669 ctgcgg 664
>gb|U66241.1|ZMU66241 Zea mays S-like RNase (kin1) mRNA, complete cds Length = 988 Score = 83.8 bits (42), Expect = 4e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 193 ctgctttagcatccacttcttgaaggggtggaagaggatctcgtcggagcacgtgaactt 252 |||||| ||||||||||||||||||||||||||||||||||| | |||||| ||| ||| Sbjct: 717 ctgcttgagcatccacttcttgaaggggtggaagaggatctccttggagcaggtgtactg 658 Query: 253 ctgcgg 258 |||||| Sbjct: 657 ctgcgg 652
>ref|NM_191917.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 552 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 gcttcggcaaaggacacgga 183 |||||||||||||||||||| Sbjct: 31 gcttcggcaaaggacacgga 50
>gb|AC016781.6| Oryza sativa (japonica cultivar-group) clone OSJNBa0084C09, complete sequence Length = 151269 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ctgctttagcatccacttct 212 |||||||||||||||||||| Sbjct: 122012 ctgctttagcatccacttct 122031
>gb|AC122403.3| Mus musculus BAC clone RP24-112A10 from chromosome 16, complete sequence Length = 169481 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 aaaggaaagaacataattcc 44 |||||||||||||||||||| Sbjct: 99893 aaaggaaagaacataattcc 99874
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ctgctttagcatccacttct 212 |||||||||||||||||||| Sbjct: 20203928 ctgctttagcatccacttct 20203947
>gb|AC147677.4| Canis Familiaris, clone XX-25A1, complete sequence Length = 154021 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 agatgaacatctgaaaaagg 29 |||||||||||||||||||| Sbjct: 95615 agatgaacatctgaaaaagg 95596
>gb|AC124196.4| Mus musculus BAC clone RP23-296L12 from chromosome 13, complete sequence Length = 193553 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tgaaaaaggaaagaacataa 40 |||||||||||||||||||| Sbjct: 88477 tgaaaaaggaaagaacataa 88458
>emb|AL596219.2| Human DNA sequence from clone RP11-659P12 on chromosome 6, complete sequence Length = 85151 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 aaaaggaaagaacataattccatg 47 ||||||||||||||| |||||||| Sbjct: 28992 aaaaggaaagaacatgattccatg 28969
>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03, complete sequence Length = 179798 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 atgcatatactagtacgtat 64 |||||||||||||||||||| Sbjct: 158901 atgcatatactagtacgtat 158882
>ref|XM_662573.1| Cryptosporidium hominis TU502 20k cyclophilin (Chro.20441), partial mRNA Length = 519 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ccctttgctacactggatca 356 |||||||||||||||||||| Sbjct: 155 ccctttgctacactggatca 174
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 atgcatatactagtacgtat 64 |||||||||||||||||||| Sbjct: 30891380 atgcatatactagtacgtat 30891361
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ctgctttagcatccacttct 212 |||||||||||||||||||| Sbjct: 20196955 ctgctttagcatccacttct 20196974
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gcttcggcaaaggacacgga 183 |||||||||||||||||||| Sbjct: 27239188 gcttcggcaaaggacacgga 27239169
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0063G05 Length = 182681 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gcttcggcaaaggacacgga 183 |||||||||||||||||||| Sbjct: 19705 gcttcggcaaaggacacgga 19686
>dbj|AK102689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102P10, full insert sequence Length = 1168 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 gcttcggcaaaggacacgga 183 |||||||||||||||||||| Sbjct: 117 gcttcggcaaaggacacgga 136
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 ctcggccacgcagatgaagatctg 312 ||||||||||| |||||||||||| Sbjct: 1851044 ctcggccacgcggatgaagatctg 1851067
>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete sequence Length = 134586 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 atgcatatactagtacgtat 64 |||||||||||||||||||| Sbjct: 67971 atgcatatactagtacgtat 67952
>emb|AL935155.13| Mouse DNA sequence from clone RP23-334M3 on chromosome 2, complete sequence Length = 123205 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tattaattattcattggaac 81 |||||||||||||||||||| Sbjct: 105496 tattaattattcattggaac 105477 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,977,641 Number of Sequences: 3902068 Number of extensions: 2977641 Number of successful extensions: 56444 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56239 Number of HSP's gapped (non-prelim): 204 length of query: 356 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 334 effective length of database: 17,147,199,772 effective search space: 5727164723848 effective search space used: 5727164723848 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)