>AMDM_SCHPO (P50998) AMP deaminase (EC 3.5.4.6) (Myoadenylate deaminase)|
          Length = 846

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +2

Query: 113 VDQPSIPELPLAYQLTLTTERETHKTEATSQPKVHPKTMEL*HVLEEISKMHGTGE 280
           +D+ ++P + LAY+  LT  +E        QP  HP   +L  ++ +   M GT +
Sbjct: 738 IDRTNVPIIRLAYR-ALTLTQEIALVNKHVQPSKHPSNHDLEELIHKYDAMTGTSD 792

>ZIMP7_HUMAN (Q8NF64) PIAS-like protein Zimp7|
          Length = 920

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 19/56 (33%), Positives = 24/56 (42%)
 Frame = +3

Query: 300 AESIPEPPPLLCAKDLSKRSLSPSKGFFFIARFVLDSDSAPAGHSQGKIHPNTQAL 467
           AE  P PPP+    D+    L+  K     +   L S  APAGH     +P T  L
Sbjct: 772 AEFTPGPPPISYQSDIPSSLLTSEK-----STACLPSQMAPAGHLDPTHNPGTPGL 822

>YGJ3_YEAST (P53148) Hypothetical 104.8 kDa protein in PAN2-NUP145 intergenic|
            region
          Length = 917

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
 Frame = +3

Query: 132  LSFHLHTSSPLXXXXXXXXXXXXASQKFTLKRWNYSMSLKKYLKCMALGKYSRTEEAESI 311
            +S+HL T   L            ++  F +K+W   +   K LK +   K ++TEE E+ 
Sbjct: 781  MSYHLFTML-LKNVEAEHQDSMLSNLFFAMKKWRPLLKYIKLLKLLFPVKITQTEEEEA- 838

Query: 312  PEPPPLLCAKDLSKRSLSPSKGFFFIARFVLDSDS--APAGHSQGKIHPNTQ 461
                 LL  KD  +R+      FF++   V  +    +  G    K+H +TQ
Sbjct: 839  -----LLQFKDYDRRN---KTAFFYVISLVSFAQGVFSENGQIPMKVHISTQ 882

>MSH6_HUMAN (P52701) DNA mismatch repair protein MSH6 (MutS-alpha 160 kDa|
           subunit) (G/T mismatch binding protein) (GTBP) (GTMBP)
           (p160)
          Length = 1360

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
 Frame = +2

Query: 26  TATPDIIWQIAFKRSCLILDLYQNLWTAPVDQPSIPELPLAYQL--TLTTERETHKTEAT 199
           +A P+I+  +      L  D  + L  A  D+PS PE     ++  T  T++     E  
Sbjct: 167 SAKPEILRAMQRADEALNKDKIKRLELAVCDEPSEPEEEEEMEVGTTYVTDKSEEDNEIE 226

Query: 200 SQPKVHPKTMEL*HVLEEISKMHGTGEIQPD 292
           S+ +V PKT        +I K     + + D
Sbjct: 227 SEEEVQPKTQGSRRSSRQIKKRRVISDSESD 257


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,914,475
Number of Sequences: 219361
Number of extensions: 1518209
Number of successful extensions: 3802
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3801
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)