ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd24i17 |
|---|---|
| Clone Library Name | barley_pub |
>TSSP_HUMAN (Q9NQE7) Thymus-specific serine protease precursor (EC 3.4.-.-)| Length = 514 Score = 39.7 bits (91), Expect = 0.007 Identities = 26/99 (26%), Positives = 40/99 (40%) Frame = -2 Query: 589 VFMTNLYYGGTSIAASKIVFTNGSQDPWRHASKQKSSEGMPSYIIKCSNCGHGTDLRGCP 410 V TN YYGG + A+K++F NG DPW H + G + H D+ P Sbjct: 422 VAQTNSYYGGQTPGANKVLFVNGDTDPW-HVLSVTQALGSSESTLLIRTGSHCLDM--AP 478 Query: 409 QLPFRIEGDSSNCTSPEAVNTVRKQIVKHIDLWLSQCHE 293 + P + ++ R+ I + + WL E Sbjct: 479 ERP----------SDSPSLRLGRQNIFQQLQTWLKLAKE 507
>TSSP_MOUSE (Q9QXE5) Thymus-specific serine protease precursor (EC 3.4.-.-)| Length = 509 Score = 38.9 bits (89), Expect = 0.011 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = -2 Query: 589 VFMTNLYYGGTSIAASKIVFTNGSQDPWRHASKQKSSEGMPSYIIKCSNCGHGTDL 422 V TN YYGG S A++++F NG DPW H G+ + + H D+ Sbjct: 421 VAQTNSYYGGQSPGATQVLFVNGDTDPW-HVLSVTQDLGLSEPALLIPSASHCFDM 475
>DPP2_RAT (Q9EPB1) Dipeptidyl-peptidase 2 precursor (EC 3.4.14.2)| (Dipeptidyl-peptidase II) (DPP II) (Dipeptidyl aminopeptidase II) (Quiescent cell proline dipeptidase) (Dipeptidyl peptidase 7) Length = 500 Score = 38.1 bits (87), Expect = 0.019 Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Frame = -2 Query: 571 YYGGTSIAASKIVFTNGSQDPWRHASKQKSSEGMPSYIIKCSNCG--HGTDLRGCPQLPF 398 ++GG AAS I+F+NG DPW Q++ + + II + G H DLR Sbjct: 409 FWGGDLKAASNIIFSNGDLDPWAGGGIQRN---LSTSIIAVTIQGGAHHLDLR------- 458 Query: 397 RIEGDSSNCTSPEAVNTVRKQIVKHIDLWL--SQCHEPARA-W*G 272 +SN P +V VRK I W+ ++ +PA A W G Sbjct: 459 -----ASNSEDPPSVVEVRKLEATLIREWVAAARLKQPAEAQWPG 498
>DPP2_MOUSE (Q9ET22) Dipeptidyl-peptidase 2 precursor (EC 3.4.14.2)| (Dipeptidyl-peptidase II) (DPP II) (Dipeptidyl aminopeptidase II) (Quiescent cell proline dipeptidase) (Dipeptidyl peptidase 7) Length = 506 Score = 36.6 bits (83), Expect = 0.056 Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 3/108 (2%) Frame = -2 Query: 571 YYGGTSIAASKIVFTNGSQDPWRHASKQKSSEGMPSYIIKCSNCGHGTDLRGCPQLPFRI 392 ++GG AAS I+F+NG DPW Q S+ + H DLR Sbjct: 409 FWGGDLKAASNIIFSNGDLDPWAGGGIQ-SNLSTSVIAVTIQGGAHHLDLR--------- 458 Query: 391 EGDSSNCTSPEAVNTVRKQIVKHIDLWL--SQCHEPAR-AW*GDDDSH 257 +SN P +V VRK I W+ ++ +PA W G H Sbjct: 459 ---ASNSEDPPSVVEVRKLESTLIREWVAAARLKQPAMPRWLGPKKQH 503
>PCP_PONPY (Q5RBU7) Lysosomal Pro-X carboxypeptidase precursor (EC 3.4.16.2)| (Prolylcarboxypeptidase) (PRCP) (Proline carboxypeptidase) Length = 496 Score = 35.8 bits (81), Expect = 0.096 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 1/95 (1%) Frame = -2 Query: 568 YGGTSIAA-SKIVFTNGSQDPWRHASKQKSSEGMPSYIIKCSNCGHGTDLRGCPQLPFRI 392 YGG +I++ + IVF+NG DPW K + S H DLR Sbjct: 411 YGGKNISSHTNIVFSNGELDPWSGGGVTKDITD-TLVAVTISEGAHHLDLR--------- 460 Query: 391 EGDSSNCTSPEAVNTVRKQIVKHIDLWLSQCHEPA 287 + N P +V R V+H+ W+ ++ A Sbjct: 461 ---TKNALDPTSVLLARSLEVRHMKNWIRDFYDSA 492
>PCP_HUMAN (P42785) Lysosomal Pro-X carboxypeptidase precursor (EC 3.4.16.2)| (Prolylcarboxypeptidase) (PRCP) (Proline carboxypeptidase) (Angiotensinase C) (Lysosomal carboxypeptidase C) Length = 496 Score = 35.4 bits (80), Expect = 0.13 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 1/95 (1%) Frame = -2 Query: 568 YGGTSIAA-SKIVFTNGSQDPWRHASKQKSSEGMPSYIIKCSNCGHGTDLRGCPQLPFRI 392 YGG +I++ + IVF+NG DPW K + S H DLR Sbjct: 411 YGGKNISSHTNIVFSNGELDPWSGGGVTKDITD-TLVAVTISEGAHHLDLR--------- 460 Query: 391 EGDSSNCTSPEAVNTVRKQIVKHIDLWLSQCHEPA 287 + N P +V R V+H+ W+ ++ A Sbjct: 461 ---TKNALDPMSVLLARSLEVRHMKNWIRDFYDSA 492
>YO26_CAEEL (P34676) Putative serine protease Z688.6 precursor (EC 3.4.-.-)| Length = 507 Score = 34.7 bits (78), Expect = 0.21 Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 3/94 (3%) Frame = -2 Query: 574 LYYGGTSI-AASKIVFTNGSQDPWRHASKQKSSEGMPSYI-IKCSNCGHGTDLRGC-PQL 404 L +G TS+ +AS IVF+NG DPW S + S I + H DLRG PQ Sbjct: 418 LAFGATSLPSASNIVFSNGYLDPWSGGGYDHSDKVQGSVISVILKQGAHHYDLRGAHPQ- 476 Query: 403 PFRIEGDSSNCTSPEAVNTVRKQIVKHIDLWLSQ 302 E V VR + I W+ + Sbjct: 477 ------------DTEEVKKVRAMETQAIKKWIKE 498
>PCP_MOUSE (Q7TMR0) Lysosomal Pro-X carboxypeptidase precursor (EC 3.4.16.2)| (Prolylcarboxypeptidase) (PRCP) (Proline carboxypeptidase) Length = 491 Score = 33.9 bits (76), Expect = 0.37 Identities = 25/93 (26%), Positives = 36/93 (38%) Frame = -2 Query: 586 FMTNLYYGGTSIAASKIVFTNGSQDPWRHASKQKSSEGMPSYIIKCSNCGHGTDLRGCPQ 407 +MT +Y G + S I+F+NG DPW + I + H DLR Sbjct: 404 WMTTMYGGKNISSHSNIIFSNGELDPWSGGGVTRDITD-TLVAINIHDGAHHLDLR---- 458 Query: 406 LPFRIEGDSSNCTSPEAVNTVRKQIVKHIDLWL 308 + N P +V R VKH+ W+ Sbjct: 459 --------AHNAFDPSSVLLSRLLEVKHMKKWI 483
>YM67_CAEEL (P34528) Putative serine protease K12H4.7 precursor (EC 3.4.-.-)| Length = 510 Score = 33.5 bits (75), Expect = 0.48 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Frame = -2 Query: 580 TNLYYGGT-SIAASKIVFTNGSQDPWRHASKQKSSEGMPSYIIKCSNCGHGTDLRGCPQL 404 TN YYGG ++ +I+ NG DPW HA + +S + + H D+ G L Sbjct: 429 TNQYYGGRDNLNTDRILLPNGDIDPW-HALGKLTSSNSNIVPVVINGTAHCADMYGASSL 487 Query: 403 PFRIEGDSSNCTSPEAVNTVRKQIVKHIDLWL 308 DS T+ R++I +D WL Sbjct: 488 ------DSMYLTN------ARQRISDVLDGWL 507
>DPP2_HUMAN (Q9UHL4) Dipeptidyl-peptidase 2 precursor (EC 3.4.14.2)| (Dipeptidyl-peptidase II) (DPP II) (Dipeptidyl aminopeptidase II) (Quiescent cell proline dipeptidase) (Dipeptidyl peptidase 7) Length = 492 Score = 32.3 bits (72), Expect = 1.1 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = -2 Query: 571 YYGGTSIAASKIVFTNGSQDPW 506 ++GG AAS I+F+NG+ DPW Sbjct: 399 FWGGDLRAASNIIFSNGNLDPW 420
>PCP1_CAEEL (P34610) Putative serine protease pcp-1 precursor (EC 3.4.-.-)| Length = 565 Score = 32.3 bits (72), Expect = 1.1 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 2/89 (2%) Frame = -2 Query: 568 YGGTSIAASKIVFTNGSQDPWRHASKQ--KSSEGMPSYIIKCSNCGHGTDLRGCPQLPFR 395 YG +S ++ T G DPW + +++ Y+++ H DLR Sbjct: 433 YGYDLSGSSNLILTQGHLDPWSGGGYKVDQNNAARGIYVLEIPGSAHHLDLR-------- 484 Query: 394 IEGDSSNCTSPEAVNTVRKQIVKHIDLWL 308 N P V R QI++ + W+ Sbjct: 485 ----QPNTCDPNTVTNARFQIIQILKCWV 509
>YM9I_CAEEL (P90893) Putative serine protease F56F10.1 precursor (EC 3.4.-.-)| Length = 540 Score = 30.8 bits (68), Expect = 3.1 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 5/50 (10%) Frame = -2 Query: 571 YYGGTSIA-ASKIVFTNGSQDPWRHA----SKQKSSEGMPSYIIKCSNCG 437 YYGG A+ +V NGS DPW HA KS +P I ++CG Sbjct: 433 YYGGADFYNATNVVLPNGSLDPW-HALGTYGTIKSQSLLPYLINGTAHCG 481
>MYST3_HUMAN (Q92794) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Runt-related transcription factor-binding protein 2) (Monocytic leukemia zinc finger protein) (Zinc finger protei Length = 2004 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = -2 Query: 496 SKQKSSEGMPSYIIKCSNCG---HGTDLRGCPQLPFRIEGDSSNCTSPEAVNTVRKQ 335 +K+++ E P +I C++CG H + L+ P+L R++ C + ++ R Q Sbjct: 215 TKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQ 271
>GIL1_ENTHI (P32022) Galactose-inhibitable lectin 170 kDa subunit| Length = 1276 Score = 30.4 bits (67), Expect = 4.0 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = -1 Query: 380 FKLHVPRSGEHSKEADRQAHRPVAIT 303 +KLH+P+S E KEAD++A+ IT Sbjct: 878 YKLHLPQSEEFMKEADKEAYCTYEIT 903
>MYST3_MOUSE (Q8BZ21) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Monocytic leukemia zinc finger protein) (Monocytic leukemia zinc finger homolog) Length = 2003 Score = 30.4 bits (67), Expect = 4.0 Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = -2 Query: 496 SKQKSSEGMPSYIIKCSNCG---HGTDLRGCPQLPFRIEGDSSNCTSPEAVNTVRKQ 335 +K+++ E P ++ C++CG H + L+ P+L R++ C + ++ R Q Sbjct: 215 TKEQNREKQPEELVSCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQ 271
>SL17_ENTHI (P23502) 170 kDa surface lectin precursor| Length = 1285 Score = 30.4 bits (67), Expect = 4.0 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = -1 Query: 380 FKLHVPRSGEHSKEADRQAHRPVAIT 303 +KLH+P+S E KEAD++A+ IT Sbjct: 886 YKLHLPQSEEFMKEADKEAYCTYEIT 911
>MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 4) (Histone acetyltransferase MOZ2) (Monocytic leukemia zinc finger protein-related factor) (Histone acetyltransferas Length = 2073 Score = 30.0 bits (66), Expect = 5.3 Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Frame = -2 Query: 496 SKQKSSEGMPSYIIKCSNCG---HGTDLRGCPQLPFRIEGDSSNCTSPEAVNTVRKQ 335 +K+ + E P ++ C++CG H + L+ CP+L ++ C + + R Q Sbjct: 222 TKESNREKKPEELLSCADCGSSGHPSCLKFCPELTTNVKALRWQCIECKTCSACRVQ 278
>MYST4_MOUSE (Q8BRB7) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 4) (Querkopf protein) Length = 1872 Score = 30.0 bits (66), Expect = 5.3 Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Frame = -2 Query: 496 SKQKSSEGMPSYIIKCSNCG---HGTDLRGCPQLPFRIEGDSSNCTSPEAVNTVRKQ 335 +K+ + E P ++ C++CG H + L+ CP+L ++ C + + R Q Sbjct: 223 TKESNREKKPEELLSCADCGSSGHPSCLKFCPELTANVKALRWQCIECKTCSACRVQ 279
>MYST4_MACFA (Q8WML3) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 4) Length = 1784 Score = 30.0 bits (66), Expect = 5.3 Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Frame = -2 Query: 496 SKQKSSEGMPSYIIKCSNCG---HGTDLRGCPQLPFRIEGDSSNCTSPEAVNTVRKQ 335 +K+ + E P ++ C++CG H + L+ CP+L ++ C + + R Q Sbjct: 222 TKESNREKKPEELLSCADCGSSGHPSCLKFCPELTTNVKALRWQCIECKTCSACRVQ 278
>MYST3_RAT (Q5TKR9) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Monocytic leukemia zinc finger protein) (Monocytic leukemia zinc finger homolog) Length = 1998 Score = 29.6 bits (65), Expect = 6.9 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Frame = -2 Query: 496 SKQKSSEGMPSYIIKCSNCG---HGTDLRGCPQLPFRIEGDSSNCTSPEAVNTVRKQ 335 +K+++ E P +I C++CG H + L+ P+L R+ C + ++ R Q Sbjct: 215 TKEQNREKKPEDLISCADCGNSGHPSCLKFSPELTVRVRALRWQCIECKTCSSCRDQ 271
>INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR) (CD220| antigen) [Contains: Insulin receptor alpha subunit; Insulin receptor beta subunit] Length = 1382 Score = 29.6 bits (65), Expect = 6.9 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +1 Query: 334 SASLLCSPLLGTCSLKSHLQS*KEAGDILSNQCHVRSCYI 453 S++LLC+P LG C HL ++ D +++ +R C + Sbjct: 323 SSNLLCTPCLGPCPKVCHLLEGEKTIDSVTSAQELRGCTV 362 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,888,136 Number of Sequences: 219361 Number of extensions: 1820804 Number of successful extensions: 4516 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 4333 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4510 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
