Clone Name | rbasd24i15 |
---|---|
Clone Library Name | barley_pub |
>dbj|AB038775.1| Hordeum vulgare mRNA for IDI2, complete cds Length = 1403 Score = 1195 bits (603), Expect = 0.0 Identities = 642/651 (98%), Gaps = 3/651 (0%) Strand = Plus / Minus Query: 1 ctttggctcacaaacactacatcctcgcaatacattctgcgtacacggctttatttttct 60 |||||| | ||||||||| |||||||||||||||| || ||||||||||||||||||||| Sbjct: 1356 ctttggataacaaacact-catcctcgcaatacat-ct-cgtacacggctttatttttct 1300 Query: 61 cacttcgaaagatcttattgttgggtgtacaacatgagcatcctatcatcaattgtgtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 cacttcgaaagatcttattgttgggtgtacaacatgagcatcctatcatcaattgtgtga 1240 Query: 121 gaaggatgttccaccacattcatgccaaacaacgctcactggagagcatcacttggcaca 180 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1239 gaaggatgttccaccgcattcatgccaaacaacgctcactggagagcatcacttggcaca 1180 Query: 181 ctcaatgaagcttttgatgtcgaaagttccatcaggatcagactttgtgatcacaccctt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1179 ctcaatgaagcttttgatgtcgaaagttccatcaggatcagactttgtgatcacaccctt 1120 Query: 241 ttctgtaatgattgcagtaattagatttgctggagtaacgtcgaaggcggggttccagac 300 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1119 ttctgtaatgattgcagtaattagatctgctggagtaacgtcgaaggcggggttccagac 1060 Query: 301 tgatatacctgacgcggcaacttgctttcctagaccaccttcagagttcaacaattcttt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1059 tgatatacctgacgcggcaacttgctttcctagaccaccttcagagttcaacaattcttt 1000 Query: 361 gggagatctttcttctatgacgatttgcttcccagatgggagggagagatcaatcgaagt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 999 gggagatctttcttctatgacgatttgcttcccagatgggagggagagatcaatcgaagt 940 Query: 421 tactggcgctgccacgtagaactgcacgccgtgatgctttgcagcaatcgagaggttgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 939 tactggcgctgccacgtagaactgcacgccgtgatgctttgcagcaatcgagaggttgta 880 Query: 481 tgtaccaattttgttggccgtgtcaccatttgcagctatacgatcagcacccacaattac 540 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 879 tgtaccaatcttgttggccgtgtcaccatttgcagctatacgatcagcacccacaattac 820 Query: 541 agcttgaacctgcccattattcatcagtgcagctgcagcagagtctgctatcaacgtggc 600 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 819 agcttgaacctgtccattattcatcagtgcagctgcagcagagtctgctatcaacgtggc 760 Query: 601 gggtattttgtcatgaactaactcaaaagctgtaagcctggaaccctggtt 651 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 759 gggtattttgtcatgaactaactcaaaagctgtaagcctggaaccctggtt 709
>dbj|AK100869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023124H10, full insert sequence Length = 1344 Score = 450 bits (227), Expect = e-123 Identities = 401/459 (87%) Strand = Plus / Minus Query: 193 tttgatgtcgaaagttccatcaggatcagactttgtgatcacacccttttctgtaatgat 252 |||||||| |||||| |||||| ||||||||||||||||||||||||||| || ||||| Sbjct: 1120 tttgatgttgaaagtctcatcagcatcagactttgtgatcacacccttttccgttatgat 1061 Query: 253 tgcagtaattagatttgctggagtaacgtcgaaggcggggttccagactgatatacctga 312 ||| ||||| |||||||| |||||||| |||||||| |||||||| || ||||||||||| Sbjct: 1060 tgcggtaatcagatttgccggagtaacatcgaaggcagggttccacaccgatatacctga 1001 Query: 313 cgcggcaacttgctttcctagaccaccttcagagttcaacaattctttgggagatctttc 372 |||||| |||||||| ||||| |||||||||||||||| ||| || |||||||| || || Sbjct: 1000 cgcggcgacttgcttacctaggccaccttcagagttcagcaactcattgggagacctctc 941 Query: 373 ttctatgacgatttgcttcccagatgggagggagagatcaatcgaagttactggcgctgc 432 ||| || || ||||||| ||||||||||||||||||||||||||||||| ||||| || Sbjct: 940 ttcgatcacaatttgctcaccagatgggagggagagatcaatcgaagttatcggcgcagc 881 Query: 433 cacgtagaactgcacgccgtgatgctttgcagcaatcgagaggttgtatgtaccaatttt 492 ||||||||| ||||| ||||||||||| |||| ||| | |||||||||||| ||||| || Sbjct: 880 cacgtagaattgcacaccgtgatgcttcgcagaaatggcgaggttgtatgtgccaatctt 821 Query: 493 gttggccgtgtcaccatttgcagctatacgatcagcacccacaattacagcttgaacctg 552 ||| || || |||||||| ||||| ||||||||||| || || ||||||||||||| Sbjct: 820 gttagcagtatcaccattggcagcgatacgatcagctccaacgattacagcttgaataca 761 Query: 553 cccattattcatcagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtc 612 ||| | ||||||||||||||||||||||| |||||||||| ||| ||||||| |||||| Sbjct: 760 cccgctcttcatcagtgcagctgcagcagaatctgctatcagcgttgcgggtactttgtc 701 Query: 613 atgaactaactcaaaagctgtaagcctggaaccctggtt 651 ||||||||||| |||||||||||||||||||||||||| Sbjct: 700 gtgaactaactcgaaagctgtaagcctggaaccctggtt 662
>dbj|AK060549.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-H07, full insert sequence Length = 1391 Score = 450 bits (227), Expect = e-123 Identities = 401/459 (87%) Strand = Plus / Minus Query: 193 tttgatgtcgaaagttccatcaggatcagactttgtgatcacacccttttctgtaatgat 252 |||||||| |||||| |||||| ||||||||||||||||||||||||||| || ||||| Sbjct: 1194 tttgatgttgaaagtctcatcagcatcagactttgtgatcacacccttttccgttatgat 1135 Query: 253 tgcagtaattagatttgctggagtaacgtcgaaggcggggttccagactgatatacctga 312 ||| ||||| |||||||| |||||||| |||||||| |||||||| || ||||||||||| Sbjct: 1134 tgcggtaatcagatttgccggagtaacatcgaaggcagggttccacaccgatatacctga 1075 Query: 313 cgcggcaacttgctttcctagaccaccttcagagttcaacaattctttgggagatctttc 372 |||||| |||||||| ||||| |||||||||||||||| ||| || |||||||| || || Sbjct: 1074 cgcggcgacttgcttacctaggccaccttcagagttcagcaactcattgggagacctctc 1015 Query: 373 ttctatgacgatttgcttcccagatgggagggagagatcaatcgaagttactggcgctgc 432 ||| || || ||||||| ||||||||||||||||||||||||||||||| ||||| || Sbjct: 1014 ttcgatcacaatttgctcaccagatgggagggagagatcaatcgaagttatcggcgcagc 955 Query: 433 cacgtagaactgcacgccgtgatgctttgcagcaatcgagaggttgtatgtaccaatttt 492 ||||||||| ||||| ||||||||||| |||| ||| | |||||||||||| ||||| || Sbjct: 954 cacgtagaattgcacaccgtgatgcttcgcagaaatggcgaggttgtatgtgccaatctt 895 Query: 493 gttggccgtgtcaccatttgcagctatacgatcagcacccacaattacagcttgaacctg 552 ||| || || |||||||| ||||| ||||||||||| || || ||||||||||||| Sbjct: 894 gttagcagtatcaccattggcagcgatacgatcagctccaacgattacagcttgaataca 835 Query: 553 cccattattcatcagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtc 612 ||| | ||||||||||||||||||||||| |||||||||| ||| ||||||| |||||| Sbjct: 834 cccgctcttcatcagtgcagctgcagcagaatctgctatcagcgttgcgggtactttgtc 775 Query: 613 atgaactaactcaaaagctgtaagcctggaaccctggtt 651 ||||||||||| |||||||||||||||||||||||||| Sbjct: 774 gtgaactaactcgaaagctgtaagcctggaaccctggtt 736
>dbj|AK060326.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H10, full insert sequence Length = 1538 Score = 450 bits (227), Expect = e-123 Identities = 401/459 (87%) Strand = Plus / Minus Query: 193 tttgatgtcgaaagttccatcaggatcagactttgtgatcacacccttttctgtaatgat 252 |||||||| |||||| |||||| ||||||||||||||||||||||||||| || ||||| Sbjct: 1182 tttgatgttgaaagtctcatcagcatcagactttgtgatcacacccttttccgttatgat 1123 Query: 253 tgcagtaattagatttgctggagtaacgtcgaaggcggggttccagactgatatacctga 312 ||| ||||| |||||||| |||||||| |||||||| |||||||| || ||||||||||| Sbjct: 1122 tgcggtaatcagatttgccggagtaacatcgaaggcagggttccacaccgatatacctga 1063 Query: 313 cgcggcaacttgctttcctagaccaccttcagagttcaacaattctttgggagatctttc 372 |||||| |||||||| ||||| |||||||||||||||| ||| || |||||||| || || Sbjct: 1062 cgcggcgacttgcttacctaggccaccttcagagttcagcaactcattgggagacctctc 1003 Query: 373 ttctatgacgatttgcttcccagatgggagggagagatcaatcgaagttactggcgctgc 432 ||| || || ||||||| ||||||||||||||||||||||||||||||| ||||| || Sbjct: 1002 ttcgatcacaatttgctcaccagatgggagggagagatcaatcgaagttatcggcgcagc 943 Query: 433 cacgtagaactgcacgccgtgatgctttgcagcaatcgagaggttgtatgtaccaatttt 492 ||||||||| ||||| ||||||||||| |||| ||| | |||||||||||| ||||| || Sbjct: 942 cacgtagaattgcacaccgtgatgcttcgcagaaatggcgaggttgtatgtgccaatctt 883 Query: 493 gttggccgtgtcaccatttgcagctatacgatcagcacccacaattacagcttgaacctg 552 ||| || || |||||||| ||||| ||||||||||| || || ||||||||||||| Sbjct: 882 gttagcagtatcaccattggcagcgatacgatcagctccaacgattacagcttgaataca 823 Query: 553 cccattattcatcagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtc 612 ||| | ||||||||||||||||||||||| |||||||||| ||| ||||||| |||||| Sbjct: 822 cccgctcttcatcagtgcagctgcagcagaatctgctatcagcgttgcgggtactttgtc 763 Query: 613 atgaactaactcaaaagctgtaagcctggaaccctggtt 651 ||||||||||| |||||||||||||||||||||||||| Sbjct: 762 gtgaactaactcgaaagctgtaagcctggaaccctggtt 724
>gb|AY738148.1| Zea mays isopentenyl-diphosphate delta isomerase 2 mRNA, complete cds Length = 1382 Score = 418 bits (211), Expect = e-114 Identities = 397/459 (86%) Strand = Plus / Minus Query: 193 tttgatgtcgaaagttccatcaggatcagactttgtgatcacacccttttctgtaatgat 252 |||||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||| Sbjct: 1213 tttgatgtcgaaagatccatcagcatcagtttttgtgatcacacccttttctgttatgat 1154 Query: 253 tgcagtaattagatttgctggagtaacgtcgaaggcggggttccagactgatatacctga 312 |||||| || ||||||||||||||||| ||||| || |||||||||||||||||||| || Sbjct: 1153 tgcagtgatcagatttgctggagtaacatcgaaagctgggttccagactgatataccgga 1094 Query: 313 cgcggcaacttgctttcctagaccaccttcagagttcaacaattctttgggagatctttc 372 || |||||||||||||| ||||||||||||||||||| ||| || || || |||||||| Sbjct: 1093 tgcagcaacttgctttcccagaccaccttcagagttcagcaactcctttggtgatctttc 1034 Query: 373 ttctatgacgatttgcttcccagatgggagggagagatcaatcgaagttactggcgctgc 432 ||||||||| || | | |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1033 ttctatgactatctcatccccagatgggagggagagatcaatggaagttaccggcgctgc 974 Query: 433 cacgtagaactgcacgccgtgatgctttgcagcaatcgagaggttgtatgtaccaatttt 492 ||| |||| ||| |||| |||||||| || | || | |||||| ||||| ||||| || Sbjct: 973 cacatagacctggacgctatgatgcttcgcggagatggcgaggttatatgtgccaatctt 914 Query: 493 gttggccgtgtcaccatttgcagctatacgatcagcacccacaattacagcttgaacctg 552 |||||| |||||||||||||| ||||| ||||||||||| ||||| ||||| ||||| || Sbjct: 913 gttggctgtgtcaccatttgctgctattcgatcagcaccaacaatgacagcctgaacatg 854 Query: 553 cccattattcatcagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtc 612 ||| | ||||||| ||||| |||||||| |||||||||| || || |||||||| || Sbjct: 853 cccttgtttcatcaacgcagcagcagcagaatctgctatcagtgttgcaggtattttttc 794 Query: 613 atgaactaactcaaaagctgtaagcctggaaccctggtt 651 |||||||||||| ||||||||||| ||||| |||||||| Sbjct: 793 atgaactaactcgaaagctgtaagtctggatccctggtt 755
>gb|AY104678.1| Zea mays PCO081661 mRNA sequence Length = 1558 Score = 396 bits (200), Expect = e-107 Identities = 395/459 (86%), Gaps = 1/459 (0%) Strand = Plus / Minus Query: 193 tttgatgtcgaaagttccatcaggatcagactttgtgatcacacccttttctgtaatgat 252 |||||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||| Sbjct: 1212 tttgatgtcgaaagatccatcagcatcagtttttgtgatcacacccttttctgttatgat 1153 Query: 253 tgcagtaattagatttgctggagtaacgtcgaaggcggggttccagactgatatacctga 312 |||||| || ||||||||||||||||| ||||| || |||||||||||||||||||| || Sbjct: 1152 tgcagtgatcagatttgctggagtaacatcgaaagctgggttccagactgatataccgga 1093 Query: 313 cgcggcaacttgctttcctagaccaccttcagagttcaacaattctttgggagatctttc 372 || |||||||||||||| ||||||||||||||||||| ||| || || || |||||||| Sbjct: 1092 tgcagcaacttgctttcccagaccaccttcagagttcagcaactcctttggtgatctttc 1033 Query: 373 ttctatgacgatttgcttcccagatgggagggagagatcaatcgaagttactggcgctgc 432 ||||||||| || | | |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1032 ttctatgactatctcatccccagatgggagggagagatcaatggaagttaccggcgctgc 973 Query: 433 cacgtagaactgcacgccgtgatgctttgcagcaatcgagaggttgtatgtaccaatttt 492 ||| |||| ||| |||| |||| || || | || | |||||| ||||| ||||| || Sbjct: 972 cacatagacctggacgctatgat-nttcgcggagatggcgaggttatatgtgccaatctt 914 Query: 493 gttggccgtgtcaccatttgcagctatacgatcagcacccacaattacagcttgaacctg 552 |||||| |||||||||||||| ||||| ||||||||||| ||||| ||||| ||||| || Sbjct: 913 gttggctgtgtcaccatttgctgctattcgatcagcaccaacaatgacagcctgaacatg 854 Query: 553 cccattattcatcagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtc 612 ||| | ||||||| ||||| |||||||| |||||||||| || || |||||||| || Sbjct: 853 cccttgtttcatcaacgcagcagcagcagaatctgctatcagtgttgcaggtattttttc 794 Query: 613 atgaactaactcaaaagctgtaagcctggaaccctggtt 651 |||||||||||| ||||||||||| ||||| |||||||| Sbjct: 793 atgaactaactcgaaagctgtaagtctggatccctggtt 755
>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09, complete sequence Length = 135363 Score = 252 bits (127), Expect = 1e-63 Identities = 226/259 (87%) Strand = Plus / Minus Query: 237 ccttttctgtaatgattgcagtaattagatttgctggagtaacgtcgaaggcggggttcc 296 ||||||| || |||||||| ||||| |||||||| |||||||| |||||||| ||||||| Sbjct: 83715 ccttttccgttatgattgcggtaatcagatttgccggagtaacatcgaaggcagggttcc 83656 Query: 297 agactgatatacctgacgcggcaacttgctttcctagaccaccttcagagttcaacaatt 356 | || ||||||||||||||||| |||||||| ||||| |||||||||||||||| ||| | Sbjct: 83655 acaccgatatacctgacgcggcgacttgcttacctaggccaccttcagagttcagcaact 83596 Query: 357 ctttgggagatctttcttctatgacgatttgcttcccagatgggagggagagatcaatcg 416 | |||||||| || ||||| || || ||||||| ||||||||||||||||||||||||| Sbjct: 83595 cattgggagacctctcttcgatcacaatttgctcaccagatgggagggagagatcaatcg 83536 Query: 417 aagttactggcgctgccacgtagaactgcacgccgtgatgctttgcagcaatcgagaggt 476 |||||| ||||| ||||||||||| ||||| ||||||||||| |||| ||| | ||||| Sbjct: 83535 aagttatcggcgcagccacgtagaattgcacaccgtgatgcttcgcagaaatggcgaggt 83476 Query: 477 tgtatgtaccaattttgtt 495 ||||||| ||||| ||||| Sbjct: 83475 tgtatgtgccaatcttgtt 83457 Score = 145 bits (73), Expect = 2e-31 Identities = 127/145 (87%) Strand = Plus / Minus Query: 505 accatttgcagctatacgatcagcacccacaattacagcttgaacctgcccattattcat 564 |||||| ||||| ||||||||||| || || ||||||||||||| ||| | ||||| Sbjct: 83362 accattggcagcgatacgatcagctccaacgattacagcttgaatacacccgctcttcat 83303 Query: 565 cagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtcatgaactaactc 624 |||||||||||||||||| |||||||||| ||| ||||||| |||||| ||||||||||| Sbjct: 83302 cagtgcagctgcagcagaatctgctatcagcgttgcgggtactttgtcgtgaactaactc 83243 Query: 625 aaaagctgtaagcctggaaccctgg 649 |||||||||||||||||||||||| Sbjct: 83242 gaaagctgtaagcctggaaccctgg 83218 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 193 tttgatgtcgaaagttccatcaggatcagactttgtgatcacaccct 239 |||||||| |||||| |||||| ||||||||||||||||||||||| Sbjct: 83861 tttgatgttgaaagtctcatcagcatcagactttgtgatcacaccct 83815
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 252 bits (127), Expect = 1e-63 Identities = 226/259 (87%) Strand = Plus / Minus Query: 237 ccttttctgtaatgattgcagtaattagatttgctggagtaacgtcgaaggcggggttcc 296 ||||||| || |||||||| ||||| |||||||| |||||||| |||||||| ||||||| Sbjct: 6027632 ccttttccgttatgattgcggtaatcagatttgccggagtaacatcgaaggcagggttcc 6027573 Query: 297 agactgatatacctgacgcggcaacttgctttcctagaccaccttcagagttcaacaatt 356 | || ||||||||||||||||| |||||||| ||||| |||||||||||||||| ||| | Sbjct: 6027572 acaccgatatacctgacgcggcgacttgcttacctaggccaccttcagagttcagcaact 6027513 Query: 357 ctttgggagatctttcttctatgacgatttgcttcccagatgggagggagagatcaatcg 416 | |||||||| || ||||| || || ||||||| ||||||||||||||||||||||||| Sbjct: 6027512 cattgggagacctctcttcgatcacaatttgctcaccagatgggagggagagatcaatcg 6027453 Query: 417 aagttactggcgctgccacgtagaactgcacgccgtgatgctttgcagcaatcgagaggt 476 |||||| ||||| ||||||||||| ||||| ||||||||||| |||| ||| | ||||| Sbjct: 6027452 aagttatcggcgcagccacgtagaattgcacaccgtgatgcttcgcagaaatggcgaggt 6027393 Query: 477 tgtatgtaccaattttgtt 495 ||||||| ||||| ||||| Sbjct: 6027392 tgtatgtgccaatcttgtt 6027374 Score = 145 bits (73), Expect = 2e-31 Identities = 127/145 (87%) Strand = Plus / Minus Query: 505 accatttgcagctatacgatcagcacccacaattacagcttgaacctgcccattattcat 564 |||||| ||||| ||||||||||| || || ||||||||||||| ||| | ||||| Sbjct: 6027279 accattggcagcgatacgatcagctccaacgattacagcttgaatacacccgctcttcat 6027220 Query: 565 cagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtcatgaactaactc 624 |||||||||||||||||| |||||||||| ||| ||||||| |||||| ||||||||||| Sbjct: 6027219 cagtgcagctgcagcagaatctgctatcagcgttgcgggtactttgtcgtgaactaactc 6027160 Query: 625 aaaagctgtaagcctggaaccctgg 649 |||||||||||||||||||||||| Sbjct: 6027159 gaaagctgtaagcctggaaccctgg 6027135 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 193 tttgatgtcgaaagttccatcaggatcagactttgtgatcacaccct 239 |||||||| |||||| |||||| ||||||||||||||||||||||| Sbjct: 6027778 tttgatgttgaaagtctcatcagcatcagactttgtgatcacaccct 6027732
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 252 bits (127), Expect = 1e-63 Identities = 226/259 (87%) Strand = Plus / Minus Query: 237 ccttttctgtaatgattgcagtaattagatttgctggagtaacgtcgaaggcggggttcc 296 ||||||| || |||||||| ||||| |||||||| |||||||| |||||||| ||||||| Sbjct: 6094109 ccttttccgttatgattgcggtaatcagatttgccggagtaacatcgaaggcagggttcc 6094050 Query: 297 agactgatatacctgacgcggcaacttgctttcctagaccaccttcagagttcaacaatt 356 | || ||||||||||||||||| |||||||| ||||| |||||||||||||||| ||| | Sbjct: 6094049 acaccgatatacctgacgcggcgacttgcttacctaggccaccttcagagttcagcaact 6093990 Query: 357 ctttgggagatctttcttctatgacgatttgcttcccagatgggagggagagatcaatcg 416 | |||||||| || ||||| || || ||||||| ||||||||||||||||||||||||| Sbjct: 6093989 cattgggagacctctcttcgatcacaatttgctcaccagatgggagggagagatcaatcg 6093930 Query: 417 aagttactggcgctgccacgtagaactgcacgccgtgatgctttgcagcaatcgagaggt 476 |||||| ||||| ||||||||||| ||||| ||||||||||| |||| ||| | ||||| Sbjct: 6093929 aagttatcggcgcagccacgtagaattgcacaccgtgatgcttcgcagaaatggcgaggt 6093870 Query: 477 tgtatgtaccaattttgtt 495 ||||||| ||||| ||||| Sbjct: 6093869 tgtatgtgccaatcttgtt 6093851 Score = 145 bits (73), Expect = 2e-31 Identities = 127/145 (87%) Strand = Plus / Minus Query: 505 accatttgcagctatacgatcagcacccacaattacagcttgaacctgcccattattcat 564 |||||| ||||| ||||||||||| || || ||||||||||||| ||| | ||||| Sbjct: 6093756 accattggcagcgatacgatcagctccaacgattacagcttgaatacacccgctcttcat 6093697 Query: 565 cagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtcatgaactaactc 624 |||||||||||||||||| |||||||||| ||| ||||||| |||||| ||||||||||| Sbjct: 6093696 cagtgcagctgcagcagaatctgctatcagcgttgcgggtactttgtcgtgaactaactc 6093637 Query: 625 aaaagctgtaagcctggaaccctgg 649 |||||||||||||||||||||||| Sbjct: 6093636 gaaagctgtaagcctggaaccctgg 6093612 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 193 tttgatgtcgaaagttccatcaggatcagactttgtgatcacaccct 239 |||||||| |||||| |||||| ||||||||||||||||||||||| Sbjct: 6094255 tttgatgttgaaagtctcatcagcatcagactttgtgatcacaccct 6094209
>dbj|AB031321.1| Nicotiana tabacum cig2 mRNA, complete cds Length = 1378 Score = 71.9 bits (36), Expect = 3e-09 Identities = 123/152 (80%) Strand = Plus / Minus Query: 473 aggttgtatgtaccaattttgttggccgtgtcaccatttgcagctatacgatcagcaccc 532 |||||||| || || || || ||||| || |||||||| || |||| ||||||||| || Sbjct: 843 aggttgtaagttccgatcttattggcagtatcaccattggcggctacacgatcagctcca 784 Query: 533 acaattacagcttgaacctgcccattattcatcagtgcagctgcagcagagtctgctatc 592 ||||| ||||||| ||| | ||| |||||||| |||||||||||| || |||||||| Sbjct: 783 acaatgacagctttcacccgaccagcattcatcaatgcagctgcagctgaatctgctata 724 Query: 593 aacgtggcgggtattttgtcatgaactaactc 624 | ||||| ||||| || |||||||| ||||| Sbjct: 723 agggtggctggtatgttctcatgaaccaactc 692 Score = 44.1 bits (22), Expect = 0.57 Identities = 79/98 (80%) Strand = Plus / Minus Query: 227 gtgatcacacccttttctgtaatgattgcagtaattagatttgctggagtaacgtcgaag 286 ||||| ||||||||||| || || ||| || |||| | |||||||||||| || || || Sbjct: 1089 gtgatgacacccttttcagtgataattccactaatcaaatttgctggagtgacatcaaat 1030 Query: 287 gcggggttccagactgatatacctgacgcggcaacttg 324 || |||||||| || || ||||| || || |||||||| Sbjct: 1029 gcagggttccaaaccgaaataccagaggcagcaacttg 992
>gb|AC005970.3| Arabidopsis thaliana chromosome 2 clone T6P5 map mi310, complete sequence Length = 121160 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 560 ttcatcagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtcatgaact 619 |||||||||||||||||||| |||||||| || | || || || ||||| ||||| || Sbjct: 15174 ttcatcagtgcagctgcagctgagtctgcaatgagagttgcagggattttctcatgcacc 15115 Query: 620 aactcaaaagctgtaagcctggaaccctg 648 |||||||| ||||||||||| || ||||| Sbjct: 15114 aactcaaacgctgtaagcctcgatccctg 15086
>ref|NM_001036262.1| Arabidopsis thaliana GTP binding / translation initiation factor AT2G05830 transcript variant AT2G05830.3 mRNA, complete cds Length = 1395 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 560 ttcatcagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtcatgaact 619 |||||||||||||||||||| |||||||| || | || || || ||||| ||||| || Sbjct: 725 ttcatcagtgcagctgcagctgagtctgcaatgagagttgcagggattttctcatgcacc 666 Query: 620 aactcaaaagctgtaagcct 639 |||||||| ||||||||||| Sbjct: 665 aactcaaacgctgtaagcct 646
>ref|NM_201699.1| Arabidopsis thaliana GTP binding / translation initiation factor AT2G05830 transcript variant AT2G05830.2 mRNA, complete cds Length = 1530 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 560 ttcatcagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtcatgaact 619 |||||||||||||||||||| |||||||| || | || || || ||||| ||||| || Sbjct: 860 ttcatcagtgcagctgcagctgagtctgcaatgagagttgcagggattttctcatgcacc 801 Query: 620 aactcaaaagctgtaagcct 639 |||||||| ||||||||||| Sbjct: 800 aactcaaacgctgtaagcct 781
>ref|NM_126596.2| Arabidopsis thaliana GTP binding / translation initiation factor AT2G05830 transcript variant AT2G05830.1 mRNA, complete cds Length = 1510 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 560 ttcatcagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtcatgaact 619 |||||||||||||||||||| |||||||| || | || || || ||||| ||||| || Sbjct: 840 ttcatcagtgcagctgcagctgagtctgcaatgagagttgcagggattttctcatgcacc 781 Query: 620 aactcaaaagctgtaagcct 639 |||||||| ||||||||||| Sbjct: 780 aactcaaacgctgtaagcct 761
>gb|AY128839.1| Arabidopsis thaliana putative translation initiation factor eIF-2B alpha subunit (At2g05830) mRNA, complete cds Length = 1024 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 560 ttcatcagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtcatgaact 619 |||||||||||||||||||| |||||||| || | || || || ||||| ||||| || Sbjct: 578 ttcatcagtgcagctgcagctgagtctgcaatgagagttgcagggattttctcatgcacc 519 Query: 620 aactcaaaagctgtaagcct 639 |||||||| ||||||||||| Sbjct: 518 aactcaaacgctgtaagcct 499
>gb|AY099595.1| Arabidopsis thaliana putative translation initiation factor eIF-2B alpha subunit (At2g05830) mRNA, complete cds Length = 1202 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 560 ttcatcagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtcatgaact 619 |||||||||||||||||||| |||||||| || | || || || ||||| ||||| || Sbjct: 655 ttcatcagtgcagctgcagctgagtctgcaatgagagttgcagggattttctcatgcacc 596 Query: 620 aactcaaaagctgtaagcct 639 |||||||| ||||||||||| Sbjct: 595 aactcaaacgctgtaagcct 576
>emb|BX821142.1|CNS0AA41 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL19ZD03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1269 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 560 ttcatcagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtcatgaact 619 |||||||||||||||||||| |||||||| || | || || || ||||| ||||| || Sbjct: 786 ttcatcagtgcagctgcagctgagtctgcaatgagagttgcagggattttctcatgcacc 727 Query: 620 aactcaaaagctgtaagcct 639 |||||||| ||||||||||| Sbjct: 726 aactcaaacgctgtaagcct 707
>emb|BX820919.1|CNS0A8MI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH81ZD12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1253 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 560 ttcatcagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtcatgaact 619 |||||||||||||||||||| |||||||| || | || || || ||||| ||||| || Sbjct: 747 ttcatcagtgcagctgcagctgagtctgcaatgagagttgcagggattttctcatgcacc 688 Query: 620 aactcaaaagctgtaagcct 639 |||||||| ||||||||||| Sbjct: 687 aactcaaacgctgtaagcct 668
>emb|BX820068.1|CNS0A8IS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS70ZC05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1454 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 560 ttcatcagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtcatgaact 619 |||||||||||||||||||| |||||||| || | || || || ||||| ||||| || Sbjct: 860 ttcatcagtgcagctgcagctgagtctgcaatgagagttgcagggattttctcatgcacc 801 Query: 620 aactcaaaagctgtaagcct 639 |||||||| ||||||||||| Sbjct: 800 aactcaaacgctgtaagcct 781
>emb|BX819922.1|CNS0A7WE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS4ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1323 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 560 ttcatcagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtcatgaact 619 |||||||||||||||||||| |||||||| || | || || || ||||| ||||| || Sbjct: 804 ttcatcagtgcagctgcagctgagtctgcaatgagagttgcagggattttctcatgcacc 745 Query: 620 aactcaaaagctgtaagcct 639 |||||||| ||||||||||| Sbjct: 744 aactcaaacgctgtaagcct 725
>gb|AY087601.1| Arabidopsis thaliana clone 36965 mRNA, complete sequence Length = 1386 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 560 ttcatcagtgcagctgcagcagagtctgctatcaacgtggcgggtattttgtcatgaact 619 |||||||||||||||||||| |||||||| || | || || || ||||| ||||| || Sbjct: 840 ttcatcagtgcagctgcagctgagtctgcaatgagagttgcagggattttctcatgcacc 781 Query: 620 aactcaaaagctgtaagcct 639 |||||||| ||||||||||| Sbjct: 780 aactcaaacgctgtaagcct 761
>gb|AC156828.8| Medicago truncatula clone mth2-18j19, complete sequence Length = 133901 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Plus Query: 568 tgcagctgcagcagagtctgctatcaacgtggcgggtattttgtcatgaactaactcaaa 627 ||||||||||||||| ||||| || | || || |||||||||||||| || |||||| | Sbjct: 30521 tgcagctgcagcagaatctgcaataagagttgctggtattttgtcatgtaccaactcata 30580 Query: 628 agctgtaagcctggaaccctg 648 || ||||| ||||| ||||| Sbjct: 30581 ggcagtaagtctggatccctg 30601 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Plus Query: 346 gttcaacaattctttgggagatctttcttctatgacgatttg 387 ||||||||| || ||||||||||| ||||| ||||| ||||| Sbjct: 30204 gttcaacaactccttgggagatctctcttcaatgacaatttg 30245
>emb|BX819929.1|CNS0A8I4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS4ZH10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 601 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 560 ttcatcagtgcagctgcagcagagtctgc 588 |||||||||||||||||||| |||||||| Sbjct: 53 ttcatcagtgcagctgcagctgagtctgc 25
>gb|AC124440.3| Mus musculus BAC clone RP24-176E5 from chromosome 3, complete sequence Length = 173198 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 472 gaggttgtatgtaccaattttg 493 |||||||||||||||||||||| Sbjct: 140840 gaggttgtatgtaccaattttg 140861
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 428 gctgccacgtagaactgcacgccgtg 453 ||||||||||||||| |||||||||| Sbjct: 460011 gctgccacgtagaacggcacgccgtg 459986
>gb|AC105966.11| Mus musculus chromosome 3, clone RP23-403H2, complete sequence Length = 201376 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 ctgtaatgattgcagtaatta 263 ||||||||||||||||||||| Sbjct: 10962 ctgtaatgattgcagtaatta 10942
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 482 gtaccaattttgttggccgtgtcaccatt 510 |||||||| |||||||| ||||||||||| Sbjct: 743327 gtaccaatcttgttggcggtgtcaccatt 743299
>gb|AY724483.1| Rattus norvegicus clone UI-R-FJ0-cpv-a-07-0-UI unknown mRNA Length = 3046 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cacacccttttctgtaatgat 252 ||||||||||||||||||||| Sbjct: 1477 cacacccttttctgtaatgat 1457
>gb|BC003422.1| Mus musculus 3-oxoacid CoA transferase 1, mRNA (cDNA clone MGC:6772 IMAGE:2598824), complete cds Length = 1823 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cacacccttttctgtaatgat 252 ||||||||||||||||||||| Sbjct: 1473 cacacccttttctgtaatgat 1453
>ref|NM_024188.3| Mus musculus 3-oxoacid CoA transferase 1 (Oxct1), mRNA Length = 1920 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cacacccttttctgtaatgat 252 ||||||||||||||||||||| Sbjct: 1449 cacacccttttctgtaatgat 1429
>ref|XM_453746.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D15455g predicted mRNA Length = 1224 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 482 gtaccaattttgttggccgtgtcaccatt 510 |||||||| || ||||||||||||||||| Sbjct: 866 gtaccaatcttattggccgtgtcaccatt 838
>gb|AC161183.10| Mus musculus chromosome 3, clone RP23-172P6, complete sequence Length = 222012 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 ctgtaatgattgcagtaatta 263 ||||||||||||||||||||| Sbjct: 83440 ctgtaatgattgcagtaatta 83460
>ref|XM_809956.1| Trypanosoma cruzi strain CL Brener phosphatidylinositol-4-phosphate 5-kinase-like (Tc00.1047053506957.140) partial mRNA Length = 3042 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 tcacttcgaaagatcttattg 80 ||||||||||||||||||||| Sbjct: 1309 tcacttcgaaagatcttattg 1329
>ref|XM_572885.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNI02750) partial mRNA Length = 1351 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 482 gtaccaattttgttggccgtgtcaccatt 510 |||||||| |||||||| ||||||||||| Sbjct: 941 gtaccaatcttgttggcggtgtcaccatt 913
>ref|XM_784702.1| PREDICTED: Strongylocentrotus purpuratus similar to Folylpolyglutamate synthase, mitochondrial precursor (Folylpoly-gamma-glutamate synthetase) (FPGS) (Tetrahydrofolylpolyglutamate synthase) (LOC584857), mRNA Length = 1648 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 tcactggagagcatcacttggcaca 180 ||||||||||||||| ||||||||| Sbjct: 695 tcactggagagcatcgcttggcaca 719
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 482 gtaccaattttgttggccgtgtcaccatt 510 |||||||| || ||||||||||||||||| Sbjct: 1310512 gtaccaatcttattggccgtgtcaccatt 1310484
>ref|NM_170551.1| Drosophila melanogaster CG11334-RA, transcript variant A (CG11334), mRNA Length = 1514 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 482 gtaccaattttgttggccgtgtcaccatt 510 |||||||| |||||||||||||| ||||| Sbjct: 1034 gtaccaatcttgttggccgtgtcgccatt 1006
>ref|NM_143611.2| Drosophila melanogaster CG11334-RB, transcript variant B (CG11334), mRNA Length = 1428 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 482 gtaccaattttgttggccgtgtcaccatt 510 |||||||| |||||||||||||| ||||| Sbjct: 948 gtaccaatcttgttggccgtgtcgccatt 920
>dbj|AK146158.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730024K23 product:3-oxoacid CoA transferase, full insert sequence Length = 3237 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cacacccttttctgtaatgat 252 ||||||||||||||||||||| Sbjct: 1527 cacacccttttctgtaatgat 1507
>dbj|AK151695.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830034F01 product:3-oxoacid CoA transferase, full insert sequence Length = 1831 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cacacccttttctgtaatgat 252 ||||||||||||||||||||| Sbjct: 1499 cacacccttttctgtaatgat 1479
>dbj|AK151662.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830032O11 product:3-oxoacid CoA transferase, full insert sequence Length = 3219 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cacacccttttctgtaatgat 252 ||||||||||||||||||||| Sbjct: 1508 cacacccttttctgtaatgat 1488
>dbj|AK167681.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:I530028F18 product:3-oxoacid CoA transferase, full insert sequence Length = 1930 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cacacccttttctgtaatgat 252 ||||||||||||||||||||| Sbjct: 1599 cacacccttttctgtaatgat 1579
>gb|AY060664.1| Drosophila melanogaster GH08894 full length cDNA Length = 1455 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 482 gtaccaattttgttggccgtgtcaccatt 510 |||||||| |||||||||||||| ||||| Sbjct: 948 gtaccaatcttgttggccgtgtcgccatt 920
>dbj|AK078086.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330439J10 product:3-oxoacid CoA transferase, full insert sequence Length = 2099 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cacacccttttctgtaatgat 252 ||||||||||||||||||||| Sbjct: 1767 cacacccttttctgtaatgat 1747
>dbj|AK010029.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310063M03 product:3-oxoacid CoA transferase, full insert sequence Length = 1866 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cacacccttttctgtaatgat 252 ||||||||||||||||||||| Sbjct: 152 cacacccttttctgtaatgat 132
>dbj|AK009027.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2300004E12 product:3-oxoacid CoA transferase, full insert sequence Length = 1558 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cacacccttttctgtaatgat 252 ||||||||||||||||||||| Sbjct: 1549 cacacccttttctgtaatgat 1529
>dbj|AK011354.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610008O03 product:3-oxoacid CoA transferase, full insert sequence Length = 1920 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cacacccttttctgtaatgat 252 ||||||||||||||||||||| Sbjct: 1449 cacacccttttctgtaatgat 1429
>gb|AC009349.6|AC009349 Drosophila melanogaster, chromosome 3R, region 100C-100C, BAC clone BACR10O09, complete sequence Length = 165555 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 482 gtaccaattttgttggccgtgtcaccatt 510 |||||||| |||||||||||||| ||||| Sbjct: 23498 gtaccaatcttgttggccgtgtcgccatt 23526
>gb|AC008287.4|AC008287 Drosophila melanogaster, chromosome 3R, region 100C-100C, BAC clone BACR02G16, complete sequence Length = 177480 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 482 gtaccaattttgttggccgtgtcaccatt 510 |||||||| |||||||||||||| ||||| Sbjct: 113428 gtaccaatcttgttggccgtgtcgccatt 113456
>gb|AF287134.1| Ochromonas danica mitochondrial DNA, complete genome Length = 41035 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 571 agctgcagcagagtctgctat 591 ||||||||||||||||||||| Sbjct: 34476 agctgcagcagagtctgctat 34496
>ref|XM_577990.1| PREDICTED: Rattus norvegicus similar to ENSANGP00000010498 (LOC502508), mRNA Length = 711 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cacacccttttctgtaatgat 252 ||||||||||||||||||||| Sbjct: 117 cacacccttttctgtaatgat 97
>gb|AE003778.3| Drosophila melanogaster chromosome 3R, section 116 of 118 of the complete sequence Length = 225974 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 482 gtaccaattttgttggccgtgtcaccatt 510 |||||||| |||||||||||||| ||||| Sbjct: 95695 gtaccaatcttgttggccgtgtcgccatt 95723
>dbj|AB085609.1| Mus musculus mRNA for Scot, complete cds Length = 1852 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cacacccttttctgtaatgat 252 ||||||||||||||||||||| Sbjct: 1511 cacacccttttctgtaatgat 1491
>gb|U54635.1|ODU54635 Ochromonas danica NADH dehydrogenase (nad4L) gene, mitochondrial gene encoding mitochondrial protein, complete cds Length = 332 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 571 agctgcagcagagtctgctat 591 ||||||||||||||||||||| Sbjct: 219 agctgcagcagagtctgctat 239
>gb|AC134402.9| Mus musculus chromosome 5, clone RP24-301D19, complete sequence Length = 199834 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tccaccacattcatgccaaa 149 |||||||||||||||||||| Sbjct: 163581 tccaccacattcatgccaaa 163562
>ref|XM_424985.1| PREDICTED: Gallus gallus similar to stomatin (EPB72)-like 2; stomatin-like protein 2; stomatin-like 2 (LOC427411), mRNA Length = 962 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 581 gagtctgctatcaacgtggc 600 |||||||||||||||||||| Sbjct: 346 gagtctgctatcaacgtggc 365
>ref|XM_877675.1| PREDICTED: Bos taurus similar to solute carrier family 39 (zinc transporter), member 9, transcript variant 5 (LOC539399), mRNA Length = 1984 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 tttgggagatctttcttcta 377 |||||||||||||||||||| Sbjct: 1764 tttgggagatctttcttcta 1745
>ref|XM_877629.1| PREDICTED: Bos taurus similar to solute carrier family 39 (zinc transporter), member 9, transcript variant 4 (LOC539399), mRNA Length = 1837 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 tttgggagatctttcttcta 377 |||||||||||||||||||| Sbjct: 1617 tttgggagatctttcttcta 1598
>ref|XM_877584.1| PREDICTED: Bos taurus similar to solute carrier family 39 (zinc transporter), member 9, transcript variant 3 (LOC539399), mRNA Length = 2107 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 tttgggagatctttcttcta 377 |||||||||||||||||||| Sbjct: 1887 tttgggagatctttcttcta 1868
>ref|XM_586888.2| PREDICTED: Bos taurus similar to solute carrier family 39 (zinc transporter), member 9, transcript variant 1 (LOC539399), mRNA Length = 2053 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 tttgggagatctttcttcta 377 |||||||||||||||||||| Sbjct: 1833 tttgggagatctttcttcta 1814
>gb|AC100755.8| Homo sapiens chromosome 15, clone RP11-262J5, complete sequence Length = 174177 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 tttctgtaatgattgcagtaatta 263 |||||||||||||||||| ||||| Sbjct: 20005 tttctgtaatgattgcagaaatta 20028
>gb|AC005296.2| Homo sapiens X BAC GS1-214D18 (Genome Systems Human BAC Library) complete sequence Length = 191503 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 ttccaccacattcatgccaa 148 |||||||||||||||||||| Sbjct: 37185 ttccaccacattcatgccaa 37204
>gb|AC100754.8| Homo sapiens chromosome 15, clone RP11-262I11, complete sequence Length = 118732 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 240 tttctgtaatgattgcagtaatta 263 |||||||||||||||||| ||||| Sbjct: 22996 tttctgtaatgattgcagaaatta 22973
>ref|XM_747148.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g05830) partial mRNA Length = 1164 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 479 tatgtaccaattttgttggccgtgtcaccatt 510 |||||||| ||||||||||| ||||| ||||| Sbjct: 815 tatgtacctattttgttggctgtgtctccatt 784
>gb|AC126410.12| Mus musculus chromosome 5, clone RP23-368H6, complete sequence Length = 187058 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 tccaccacattcatgccaaa 149 |||||||||||||||||||| Sbjct: 94574 tccaccacattcatgccaaa 94593
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 cttgctttcctagaccaccttcag 344 |||||||| ||||||||||||||| Sbjct: 2784997 cttgcttttctagaccaccttcag 2784974
>emb|AL357057.19| Human DNA sequence from clone RP11-802N13 on chromosome 6 Contains part of the CLIC5 gene for chloride intracellular channel 5, complete sequence Length = 58133 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 ctttgggagatctttcttct 376 |||||||||||||||||||| Sbjct: 44604 ctttgggagatctttcttct 44623
>gb|AC100756.4| Homo sapiens chromosome 18, clone RP11-529J17, complete sequence Length = 173833 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 tttctgtaatgattgcagtaatta 263 |||||||||||||||||| ||||| Sbjct: 20006 tttctgtaatgattgcagaaatta 20029
>gb|AC069302.4| Homo sapiens BAC clone RP11-322J23 from 4, complete sequence Length = 178780 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 ttttctgtaatgattgcagtaatt 262 |||||||||||||||| ||||||| Sbjct: 3647 ttttctgtaatgattgtagtaatt 3670
>emb|CR386500.1| Gallus gallus finished cDNA, clone ChEST333h21 Length = 1243 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 581 gagtctgctatcaacgtggc 600 |||||||||||||||||||| Sbjct: 630 gagtctgctatcaacgtggc 649
>emb|CR385785.1| Gallus gallus finished cDNA, clone ChEST68h19 Length = 986 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 581 gagtctgctatcaacgtggc 600 |||||||||||||||||||| Sbjct: 373 gagtctgctatcaacgtggc 392
>emb|BX932823.1| Gallus gallus finished cDNA, clone ChEST268c7 Length = 1288 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 581 gagtctgctatcaacgtggc 600 |||||||||||||||||||| Sbjct: 674 gagtctgctatcaacgtggc 693
>gb|AC109338.17| Homo sapiens chromosome 15, clone RP11-228G18, complete sequence Length = 141868 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 tttctgtaatgattgcagtaatta 263 |||||||||||||||||| ||||| Sbjct: 10112 tttctgtaatgattgcagaaatta 10135
>dbj|BS000028.1| Pan troglodytes chromosome 22 clone:PTB-087F19, map 22, complete sequences Length = 223409 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 ttccaccacattcatgccaa 148 |||||||||||||||||||| Sbjct: 31185 ttccaccacattcatgccaa 31204
>emb|BX005121.8| Zebrafish DNA sequence from clone DKEY-5E16 in linkage group 20, complete sequence Length = 211231 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 tgtaatgattgcagtaatta 263 |||||||||||||||||||| Sbjct: 5613 tgtaatgattgcagtaatta 5632
>gb|AC008042.10|AC008042 Homo sapiens 3q25-26 BAC CITB-159N23 (California Institute of Technology BAC Library) complete sequence Length = 121041 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 tggagagcatcacttggcac 179 |||||||||||||||||||| Sbjct: 9124 tggagagcatcacttggcac 9105
>dbj|AP001667.1| Homo sapiens genomic DNA, chromosome 21q, section 11/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 ttccaccacattcatgccaa 148 |||||||||||||||||||| Sbjct: 127302 ttccaccacattcatgccaa 127321
>gb|AC037193.4| Homo sapiens chromosome 3 clone RP11-334L22 map 3p, complete sequence Length = 182261 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 tggagagcatcacttggcac 179 |||||||||||||||||||| Sbjct: 116120 tggagagcatcacttggcac 116139
>gb|AC066583.5| Homo sapiens chromosome 3 clone RP11-203C4 map 3p, complete sequence Length = 160785 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 tggagagcatcacttggcac 179 |||||||||||||||||||| Sbjct: 123811 tggagagcatcacttggcac 123830
>gb|AC073446.16| Homo sapiens chromosome 15, clone RP11-757E13, complete sequence Length = 185123 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 240 tttctgtaatgattgcagtaatta 263 |||||||||||||||||| ||||| Sbjct: 140779 tttctgtaatgattgcagaaatta 140756
>dbj|AP000962.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B821P16, LL56-APP region, complete sequence Length = 185300 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 ttccaccacattcatgccaa 148 |||||||||||||||||||| Sbjct: 58846 ttccaccacattcatgccaa 58865 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,769,638 Number of Sequences: 3902068 Number of extensions: 5769638 Number of successful extensions: 97240 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96960 Number of HSP's gapped (non-prelim): 267 length of query: 651 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 628 effective length of database: 17,143,297,704 effective search space: 10765990958112 effective search space used: 10765990958112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)