Clone Name | rbasd24i13 |
---|---|
Clone Library Name | barley_pub |
>WRK20_ARATH (Q93WV0) Probable WRKY transcription factor 20 (WRKY DNA-binding| protein 20) Length = 557 Score = 37.4 bits (85), Expect = 0.029 Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 3/102 (2%) Frame = -3 Query: 556 TVSLDLGVGIS---PNHSDATNQMQSSGPDQMQYQMQTMGSMYGNMRHPSSMAAPAVQGN 386 T+SL+LGVGIS PNH+ +Q Q+ Q+ Q G + H S M++ N Sbjct: 461 TISLNLGVGISSDGPNHASNEHQHQN---QQLVNQTHPNGVNF-RFVHASPMSSYYASLN 516 Query: 385 SAGRMYGSREEKGNEGFTFRATPMDHSANLCYSSAGNLVMGP 260 S YG RE K NE + +++S+ + G + GP Sbjct: 517 SGMNQYGQRETK-NETQNGDISSLNNSSYPYPPNMGRVQSGP 557
>GLR31_ARATH (Q7XJL2) Glutamate receptor 3.1 precursor (Ligand-gated ion channel| 3.1) (AtGLR2) Length = 921 Score = 33.9 bits (76), Expect = 0.32 Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 4/112 (3%) Frame = +3 Query: 156 TQLRILL---KRLSLQSIVGNI*FMEL*AFADTLIPSHGPMTKFPA-LL*HRLAEWSIGV 323 ++LRIL+ KR SI+G + FME ++ GP T A +L H E ++ Sbjct: 67 SKLRILMNDAKRSGFLSIMGALQFMET-----DVVAIIGPQTSIMAHVLSHLANELTV-- 119 Query: 324 ALKVNPSLPFSSLEPYMRPAEFPCTAGAAIDDGCLMLPYIEPMVCI*YCIWS 479 P L F++L+P + P +FP A D LM E I Y WS Sbjct: 120 -----PMLSFTALDPTLSPLQFPFFVQTAPSDLFLMRAIAE---MITYYGWS 163
>GON4L_RAT (Q535K8) GON-4-like protein (Protein GON4) (GON-4 homolog)| Length = 2256 Score = 32.0 bits (71), Expect = 1.2 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = +1 Query: 373 CGQQSFLVPLALPLMMDVSCCRTSNPW 453 CG+ SF P ALP M S RTS PW Sbjct: 1069 CGEDSFESPAALPAMPSGSEARTSFPW 1095
>CNTN5_CHICK (Q90W79) Contactin-5 precursor (F11 axonin-1-related protein 2)| (FAR-2) Length = 1027 Score = 31.6 bits (70), Expect = 1.6 Identities = 21/72 (29%), Positives = 35/72 (48%) Frame = -3 Query: 502 NQMQSSGPDQMQYQMQTMGSMYGNMRHPSSMAAPAVQGNSAGRMYGSREEKGNEGFTFRA 323 N+M+ SG QYQ T +M+G++ ++ A GN +GR + + +G Sbjct: 90 NEMKDSG----QYQCLTT-NMFGSILSREAVLQFAYLGNFSGRTRSAVSVREGQGVVLMC 144 Query: 322 TPMDHSANLCYS 287 +P HS + YS Sbjct: 145 SPPLHSPEIIYS 156
>SIRT2_HUMAN (Q8IXJ6) NAD-dependent deacetylase sirtuin-2 (EC 3.5.1.-)| (SIR2-like) (SIR2-like protein 2) Length = 389 Score = 31.2 bits (69), Expect = 2.1 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = +2 Query: 161 IENLAEEIVITKHCW*YMIHGAMSICRHSHSLSWTHDQVPSTAIA*VS*MVHRCGSESKP 340 I L +E ++ H Y H + CRH + LSW +++ S V+ C S KP Sbjct: 175 IAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSE----VTPKCEDCQSLVKP 230 Query: 341 FVTF 352 + F Sbjct: 231 DIVF 234
>SIRT2_RAT (Q924Y7) NAD-dependent deacetylase sirtuin-2 (EC 3.5.1.-)| (SIR2-like protein 2) Length = 352 Score = 31.2 bits (69), Expect = 2.1 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = +2 Query: 161 IENLAEEIVITKHCW*YMIHGAMSICRHSHSLSWTHDQVPSTAIA*VS*MVHRCGSESKP 340 I L +E ++ H Y H + CRH + LSW +++ S V+ C S KP Sbjct: 138 IAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSE----VTPKCEDCQSLVKP 193 Query: 341 FVTF 352 + F Sbjct: 194 DIVF 197
>SIRT2_PONPY (Q5RBF1) NAD-dependent deacetylase sirtuin-2 (EC 3.5.1.-)| Length = 352 Score = 31.2 bits (69), Expect = 2.1 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = +2 Query: 161 IENLAEEIVITKHCW*YMIHGAMSICRHSHSLSWTHDQVPSTAIA*VS*MVHRCGSESKP 340 I L +E ++ H Y H + CRH + LSW +++ S V+ C S KP Sbjct: 138 IAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSE----VTPKCEDCQSLVKP 193 Query: 341 FVTF 352 + F Sbjct: 194 DIVF 197
>V014_FOWPV (Q9J5I7) Putative ankyrin repeat protein FPV014| Length = 437 Score = 29.6 bits (65), Expect = 6.0 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -3 Query: 193 CNDNLFSKILNCVSVTSQFSRRQVC*YKLYLG 98 C+DN +K LNC+S F RQ+ Y + G Sbjct: 351 CDDNAIAKCLNCISCEGFFIYRQLIEYTIERG 382 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,064,004 Number of Sequences: 219361 Number of extensions: 1635689 Number of successful extensions: 3813 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3725 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3812 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)