>CLPX_HAEDU (Q7VP79) ATP-dependent Clp protease ATP-binding subunit clpX|
          Length = 418

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 191 VTSDELGFGDEMVLMKMLVMTMATISPSGREVSPAGSS 304
           +T D  G G +  L+K++  T+A I+P G    P G +
Sbjct: 201 ITRDVSGEGVQQALLKLIEGTVANINPQGSRKHPKGET 238

>RECO_RHILO (Q985A3) DNA repair protein recO (Recombination protein O)|
          Length = 253

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
 Frame = +2

Query: 173 VARWRLVTSDELGFGDEM--VLMKMLVMTMATISP-SGREVS-PAGSSCRSSRLVLLKFR 340
           VAR+ L+  DELGFG ++           +A +SP SGR VS  AG+  R   L L  F 
Sbjct: 131 VARFELLILDELGFGLDLSQCAATGTRQDLAYVSPKSGRAVSREAGAPWRDKMLALPAFL 190

Query: 341 LMGA 352
             G+
Sbjct: 191 QRGS 194

>ZN638_HUMAN (Q14966) Zinc finger protein 638 (Nuclear protein 220) (Zinc-finger|
            matrin-like protein) (Cutaneous T-cell
            lymphoma-associated antigen se33-1) (CTCL tumor antigen
            se33-1)
          Length = 1978

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 185  RLVTSDELGFGDEMVLMKMLVMTMATISPSGRE 283
            RLVT DE+G  +E+ L +   +T AT++  G E
Sbjct: 1679 RLVTVDEIGEVEELPLNESADITFATLNTKGNE 1711


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,650,427
Number of Sequences: 219361
Number of extensions: 987882
Number of successful extensions: 2004
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2004
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)