ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd24i07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ175890.1| Hordeum vulgare subsp. vulgare clone 28-22A-LB flanking T-DNA insertion sequence Length = 576 Score = 392 bits (198), Expect = e-106 Identities = 243/254 (95%), Gaps = 3/254 (1%) Strand = Plus / Plus Query: 1 gtcctcaggnaacaaaagtaactactgcacaaagcataatacatattcatgattagagag 60 ||||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| || Sbjct: 283 gtcctcagg-aacaaaagtaactact-cacaaagcataat-catattcatgaccagatag 339 Query: 61 gtaatgagtagcatcaaggatctgaacataaactcttccaccaaacaatccaactagcat 120 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 340 gtaatgagtagcatcaaggatctgaacataaactcttccaccaaataatccaactagcat 399 Query: 121 caactacaaagagtaatcaacactactagcaaccttacaagtaccaatcggagtcgcgag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 caactacaaagagtaatcaacactactagcaaccttacaagtaccaatcggagtcgcgag 459 Query: 181 atggagattggttacaagtgatgaactagggtttggagatgaaatggtgctgatgaagat 240 | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 460 acggagattggttacaagtgatgaactagggtttggagatgagatggtgctgatgaagat 519 Query: 241 gttggtgatgacga 254 |||| || |||||| Sbjct: 520 gttgatggtgacga 533 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 240 tgttggtgatgacgatggcgacg 262 ||||||||||||||||||||||| Sbjct: 554 tgttggtgatgacgatggcgacg 576
>emb|AJ279072.1|HVU279072 Hordeum vulgare BARE-2 and partial BAGY-2 retrotransposons Length = 19906 Score = 373 bits (188), Expect = e-100 Identities = 233/244 (95%), Gaps = 3/244 (1%) Strand = Plus / Plus Query: 1 gtcctcaggnaacaaaagtaactactgcacaaagcataatacatattcatgattagagag 60 ||||||||| |||||||||||||||| ||||||||| ||| ||||||||||| |||||| Sbjct: 12533 gtcctcagg-aacaaaagtaactact-cacaaagcaaaat-catattcatgaccagagag 12589 Query: 61 gtaatgagtagcatcaaggatctgaacataaactcttccaccaaacaatccaactagcat 120 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 12590 gtaatgagtagcatcaaggatctgaacataaactcttccaccaagtaatccaactagcat 12649 Query: 121 caactacaaagagtaatcaacactactagcaaccttacaagtaccaatcggagtcgcgag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12650 caactacaaagagtaatcaacactactagcaaccttacaagtaccaatcggagtcgcgag 12709 Query: 181 atggagattggttacaagtgatgaactagggtttggagatgaaatggtgctgatgaagat 240 | |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 12710 acggagattggttacaagtgatgaactagggtttggagatgagatggtgttgatgaagat 12769 Query: 241 gttg 244 |||| Sbjct: 12770 gttg 12773 Score = 178 bits (90), Expect = 1e-41 Identities = 108/114 (94%) Strand = Plus / Plus Query: 242 ttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggcaggatcg 301 |||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 12806 ttggtgatgattatggcgacaatttccccctccgggagggaagtttccccagcaggatcg 12865 Query: 302 tcctgccggagctctagattggttctgctcaagttccgcctcatgggggcggcg 355 |||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 12866 tcctgccggagctctagattggttctgctcaagttccgcctcgtggtggcggcg 12919 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 394 gacgaaacccctcatatagcaaaagagggcagcaagtgggccagcagggtgcccacaag 452 |||||||||| |||||||||| ||||||| || ||| ||||| ||||||||||||||| Sbjct: 12957 gacgaaacccttcatatagcagaagaggggggctagttggccaccagggtgcccacaag 13015
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 359 bits (181), Expect = 5e-96 Identities = 229/241 (95%), Gaps = 3/241 (1%) Strand = Plus / Plus Query: 1 gtcctcaggnaacaaaagtaactactgcacaaagcataatacatattcatgattagagag 60 ||||||||| |||||||||||||||| ||||||||||||| ||||||||||| |||||| Sbjct: 87713 gtcctcagg-aacaaaagtaactact-cacaaagcataat-catattcatgaccagagag 87769 Query: 61 gtaatgagtagcatcaaggatctgaacataaactcttccaccaaacaatccaactagcat 120 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct: 87770 gtaatgagtagcatcaaggatctgaacataaaatcttccaccaaataatccaactagcat 87829 Query: 121 caactacaaagagtaatcaacactactagcaaccttacaagtaccaatcggagtcgcgag 180 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 87830 caactacaaagagtaattaacactactagcaaccttacaagtaccaatcggagttgcgag 87889 Query: 181 atggagattggttacaagtgatgaactagggtttggagatgaaatggtgctgatgaagat 240 | |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 87890 acggagattggttacaagagatgaactagggtttggagatgagatggtgctgatgaagat 87949 Query: 241 g 241 | Sbjct: 87950 g 87950 Score = 337 bits (170), Expect = 2e-89 Identities = 220/234 (94%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 11 aacaaaagtaactactgcacaaagcataatacatattcatgattagagaggtaatgagta 70 |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 78970 aacaaaagtaactact-cacaaagcataat-catattcatgaccagagaggtaatgagta 79027 Query: 71 gcatcaaggatctgaacataaactcttccaccaaacaatccaactagcatcaactacaaa 130 |||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 79028 gcataaagaatctgaacataaactcttccaccaaataatccaactagcatcaactacaaa 79087 Query: 131 gagtaatcaacactactagcaaccttacaagtaccaatcggagtcgcgagatggagattg 190 ||||||| ||||||||||||||||||||||||||||||| |||| |||||| |||||||| Sbjct: 79088 gagtaattaacactactagcaaccttacaagtaccaatcagagttgcgagacggagattg 79147 Query: 191 gttacaagtgatgaactagggtttggagatgaaatggtgctgatgaagatgttg 244 |||||||| ||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 79148 gttacaagagatgaactagggtttggagatgagatggtgatgatgaagatgttg 79201 Score = 200 bits (101), Expect = 3e-48 Identities = 122/129 (94%) Strand = Plus / Plus Query: 240 tgttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggcaggat 299 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 87967 tgttggtgatgacgatggcgacgatttccccctccgggagagaagtttccccggcaggat 88026 Query: 300 cgtcctgccggagctctagattggttctgctcaagttccgcctcatgggggcggcgaaac 359 ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| || | Sbjct: 88027 cgtcctgccggagctctagattggttctgctcaagttccgccttgtggcggcggcaaatc 88086 Query: 360 catgaaaaa 368 | ||||||| Sbjct: 88087 cttgaaaaa 88095 Score = 186 bits (94), Expect = 4e-44 Identities = 112/118 (94%) Strand = Plus / Plus Query: 240 tgttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggcaggat 299 ||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||| Sbjct: 79232 tgttggtgatgacgatggcaacgatttctccctccgggagggaagtttccccgacaggat 79291 Query: 300 cgtcctgccggagctctagattggttctgctcaagttccgcctcatgggggcggcgaa 357 |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 79292 cgtcctgccggagctctagattggttatgctcaagttccgcctcatggcagcggcgaa 79349 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 394 gacgaaacccctcatatagcaaaagagggcagcaagtgggccagcagggtgcccacaaga 453 |||||||||| || ||||||||||| ||| ||| || |||||||| ||||||||||||| Sbjct: 79383 gacgaaacccttcttatagcaaaaggggggagccagagggccagctgggtgcccacaagc 79442 Query: 454 cccc 457 |||| Sbjct: 79443 cccc 79446 Score = 40.1 bits (20), Expect = 6.4 Identities = 53/64 (82%) Strand = Plus / Plus Query: 394 gacgaaacccctcatatagcaaaagagggcagcaagtgggccagcagggtgcccacaaga 453 |||||| ||| || ||||| ||||| ||| ||| || |||||| | ||||||||||||| Sbjct: 88119 gacgaagcccttcttatagaaaaaggggggagccagagggccatctgggtgcccacaagc 88178 Query: 454 cccc 457 |||| Sbjct: 88179 cccc 88182
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 341 bits (172), Expect = 1e-90 Identities = 228/244 (93%), Gaps = 2/244 (0%) Strand = Plus / Plus Query: 11 aacaaaagtaactactgcacaaagcataatacatattcatgattagagaggtaatgagta 70 |||||||||||||||| ||||||||||||| |||| ||||||| |||| ||||||||| Sbjct: 11303 aacaaaagtaactact-cacaaagcataat-cataatcatgatcagaggtgtaatgagtg 11360 Query: 71 gcatcaaggatctgaacataaactcttccaccaaacaatccaactagcatcaactacaaa 130 | ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 11361 gtatcaaggatctaaacataaactcttccaccaaataatccaactagcatcaactacaaa 11420 Query: 131 gagtaatcaacactactagcaaccttacaagtaccaatcggagtcgcgagatggagattg 190 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 11421 gagtaatcaacactactagcaaccttacaagtaccaatcggaatcgcgagacggagattg 11480 Query: 191 gttacaagtgatgaactagggtttggagatgaaatggtgctgatgaagatgttggtgatg 250 |||||||||||||||||||||||||||||| | ||||||||||||||||||||| || || Sbjct: 11481 gttacaagtgatgaactagggtttggagatcagatggtgctgatgaagatgttgatggtg 11540 Query: 251 acga 254 |||| Sbjct: 11541 acga 11544 Score = 278 bits (140), Expect = 2e-71 Identities = 221/244 (90%), Gaps = 3/244 (1%) Strand = Plus / Plus Query: 1 gtcctcaggnaacaaaagtaactactgcacaaagcataatacatattcatgattagagag 60 ||||||||| |||||||||||||||| ||||||||||||| |||| ||||||| |||| Sbjct: 12479 gtcctcagg-aacaaaagtaactact-cacaaagcataat-cataatcatgatcagaggt 12535 Query: 61 gtaatgagtagcatcaaggatctgaacataaactcttccaccaaacaatccaactagcat 120 ||||||| ||||||||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct: 12536 gtaatgaatagcatcaaggatctaaacataaactcttccaccaagtaatcgaactagcat 12595 Query: 121 caactacaaagagtaatcaacactactagcaaccttacaagtaccaatcggagtcgcgag 180 ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 12596 caactacaaggagtaatcaacactactagcaaccttctaagtaccaatcggagtcgcgag 12655 Query: 181 atggagattggttacaagtgatgaactagggtttggagatgaaatggtgctgatgaagat 240 | |||||||||||||||| |||||||||||| | |||| || |||||||||||||| || Sbjct: 12656 acggagattggttacaagagatgaactagggacttgagaggagatggtgctgatgaacat 12715 Query: 241 gttg 244 |||| Sbjct: 12716 gttg 12719 Score = 184 bits (93), Expect = 2e-43 Identities = 108/113 (95%) Strand = Plus / Plus Query: 240 tgttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggcaggat 299 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 12750 tgttggtgatgacgatggcgacgatttccccctgcgggagggaagtttccccggcaggat 12809 Query: 300 cgtcctgccggagctctagattggttctgctcaagttccgcctcatgggggcg 352 |||| ||||||||||||||||||| ||||||||||||||||||| ||| |||| Sbjct: 12810 cgtcgtgccggagctctagattggatctgctcaagttccgcctcgtggcggcg 12862 Score = 182 bits (92), Expect = 7e-43 Identities = 101/104 (97%) Strand = Plus / Plus Query: 240 tgttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggcaggat 299 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11565 tgttggtgatcatgatggcgacgatttccccctccgggagggaagtttccccggcaggat 11624 Query: 300 cgtcctgccggagctctagattggttctgctcaagttccgcctc 343 |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 11625 cgtcctgccggagctctagattggttctgctcaacttccgcctc 11668 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gtgggccagcagggtgcccacaag 452 |||||||| ||||||||||||||| Sbjct: 12931 gtgggccaccagggtgcccacaag 12954
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 305 bits (154), Expect = 7e-80 Identities = 216/234 (92%), Gaps = 2/234 (0%) Strand = Plus / Minus Query: 11 aacaaaagtaactactgcacaaagcataatacatattcatgattagagaggtaatgagta 70 |||||||||||||||| |||||| |||||| |||| ||||||| |||| ||||||| || Sbjct: 43047 aacaaaagtaactact-cacaaaacataat-cataatcatgatcagaggtgtaatgaata 42990 Query: 71 gcatcaaggatctgaacataaactcttccaccaaacaatccaactagcatcaactacaaa 130 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 42989 gcatcaaggatctgaacataaactcttccaccaaataatccaactagcatcaactacaaa 42930 Query: 131 gagtaatcaacactactagcaaccttacaagtaccaatcggagtcgcgagatggagattg 190 |||||||||||||||||||||||||||||||||||||||||||| || ||| | |||||| Sbjct: 42929 gagtaatcaacactactagcaaccttacaagtaccaatcggagttgcaagacgaagattg 42870 Query: 191 gttacaagtgatgaactagggtttggagatgaaatggtgctgatgaagatgttg 244 |||||||| |||||||||||| ||||||| || |||||| |||||||||||||| Sbjct: 42869 gttacaagagatgaactagggattggagaggagatggtgttgatgaagatgttg 42816 Score = 202 bits (102), Expect = 7e-49 Identities = 126/134 (94%) Strand = Plus / Minus Query: 240 tgttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggcaggat 299 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 42785 tgttggtgatgacgatggcgacgattcccccctccgggagggaagtttccccggcaggat 42726 Query: 300 cgtcctgccggagctctagattggttctgctcaagttccgcctcatgggggcggcgaaac 359 |||||||||||||||||||||||| ||||||||||||||||||| ||| |||| ||||| Sbjct: 42725 cgtcctgccggagctctagattggatctgctcaagttccgcctcgtggcggcgttgaaac 42666 Query: 360 catgaaaaaactcc 373 || |||||| |||| Sbjct: 42665 cacgaaaaagctcc 42652 Score = 186 bits (94), Expect = 4e-44 Identities = 142/154 (92%), Gaps = 3/154 (1%) Strand = Plus / Minus Query: 1 gtcctcaggnaacaaaagtaactactgcacaaagcataatacatattcatgattagagag 60 ||||||||| |||||||||||||||| || ||| |||||| |||| ||||||| |||| Sbjct: 37133 gtcctcagg-aacaaaagtaactact-caaaaaacataat-cataatcatgatcagaggt 37077 Query: 61 gtaatgagtagcatcaaggatctgaacataaactcttccaccaaacaatccaactagcat 120 ||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 37076 gtaatgaatagaatcaaggatctgaacataaactcttccaccaaataatccaactagcat 37017 Query: 121 caactacaaagagtaatcaacactactagcaacc 154 |||||||||||||||||||||||||||||||||| Sbjct: 37016 caactacaaagagtaatcaacactactagcaacc 36983 Score = 186 bits (94), Expect = 4e-44 Identities = 124/134 (92%) Strand = Plus / Minus Query: 240 tgttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggcaggat 299 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 36873 tgttggtgatgacgatggcgacgattcccccctccgggagggaagtttccccggcaggat 36814 Query: 300 cgtcctgccggagctctagattggttctgctcaagttccgcctcatgggggcggcgaaac 359 ||||||| |||||||||||||||| | ||||||||||||||||| ||| |||| ||||| Sbjct: 36813 cgtcctgtcggagctctagattggatgtgctcaagttccgcctcgtggctgcggagaaac 36754 Query: 360 catgaaaaaactcc 373 || |||||| |||| Sbjct: 36753 cacgaaaaagctcc 36740 Score = 107 bits (54), Expect = 3e-20 Identities = 75/82 (91%) Strand = Plus / Minus Query: 163 accaatcggagtcgcgagatggagattggttacaagtgatgaactagggtttggagatga 222 |||||||||||| |||||| | |||||||||||||| |||||||||||| ||||||| || Sbjct: 36985 accaatcggagttgcgagacgaagattggttacaagagatgaactagggattggagagga 36926 Query: 223 aatggtgctgatgaagatgttg 244 ||||||||||||||||||||| Sbjct: 36925 gatggtgctgatgaagatgttg 36904 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 241 gttggtgatgacgatggcgacgatttcccc 270 |||| |||||| |||||||||||||||||| Sbjct: 98751 gttgatgatgatgatggcgacgatttcccc 98780
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 283 bits (143), Expect = 3e-73 Identities = 211/231 (91%), Gaps = 2/231 (0%) Strand = Plus / Plus Query: 11 aacaaaagtaactactgcacaaagcataatacatattcatgattagagaggtaatgagta 70 |||||||||||||||| ||||| |||||| |||| |||||| |||| ||||||| || Sbjct: 229485 aacaaaagtaactact-cacaagacataat-cataatcatgaccagaggtgtaatgaata 229542 Query: 71 gcatcaaggatctgaacataaactcttccaccaaacaatccaactagcatcaactacaaa 130 |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 229543 gcatcaaggatctgaacataaactcttccaccaagtaatccaacaagcatcaactacaaa 229602 Query: 131 gagtaatcaacactactagcaaccttacaagtaccaatcggagtcgcgagatggagattg 190 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 229603 gagtaatcaacactactagcaaccttacaagtaccaatcggagtcgcgagatgaatattg 229662 Query: 191 gttacaagtgatgaactagggtttggagatgaaatggtgctgatgaagatg 241 ||||||| |||||||||||| ||||||| || |||||||||||||||||| Sbjct: 229663 attacaagagatgaactagggattggagaggagatggtgctgatgaagatg 229713 Score = 178 bits (90), Expect = 1e-41 Identities = 123/134 (91%) Strand = Plus / Plus Query: 240 tgttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggcaggat 299 ||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| ||| Sbjct: 229735 tgttggtgatgacgatggcgatgattcccccctccgggagggaaatttccccggcacgat 229794 Query: 300 cgtcctgccggagctctagattggttctgctcaagttccgcctcatgggggcggcgaaac 359 |||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||| Sbjct: 229795 cgtcctgccggagctctagattggatctgctcaagttccgcctagtggcggcggcgaaac 229854 Query: 360 catgaaaaaactcc 373 | |||||| |||| Sbjct: 229855 tacgaaaaacctcc 229868 Score = 40.1 bits (20), Expect = 6.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 405 tcatatagcaaaagagggcagcaagtgggccagcagggtgcccacaag 452 |||||||||||||||||| || |||||||| |||| ||||||||| Sbjct: 229897 tcatatagcaaaagaggggggctagtgggccttcaggcagcccacaag 229944
>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13, complete sequence Length = 102842 Score = 278 bits (140), Expect = 2e-71 Identities = 221/244 (90%), Gaps = 3/244 (1%) Strand = Plus / Plus Query: 1 gtcctcaggnaacaaaagtaactactgcacaaagcataatacatattcatgattagagag 60 ||||||||| |||||||||||||||| ||||| |||||| |||| | |||| || || Sbjct: 7828 gtcctcagg-aacaaaagtaactact-cacaagacataat-cataattatgactaaaggt 7884 Query: 61 gtaatgagtagcatcaaggatctgaacataaactcttccaccaaacaatccaactagcat 120 ||||||| ||||||||||||||||||||||||||||||||||| | |||||||| ||||| Sbjct: 7885 gtaatgaatagcatcaaggatctgaacataaactcttccaccagataatccaacaagcat 7944 Query: 121 caactacaaagagtaatcaacactactagcaaccttacaagtaccaatcggagtcgcgag 180 ||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||| Sbjct: 7945 caactacaaagagtaatcaacactattagcaaccttacaagtaccaatcggaattgcgag 8004 Query: 181 atggagattggttacaagtgatgaactagggtttggagatgaaatggtgctgatgaagat 240 | |||||||||||||||| |||||||||||| ||||||| || ||||||||||||||||| Sbjct: 8005 acggagattggttacaagagatgaactagggattggagaggagatggtgctgatgaagat 8064 Query: 241 gttg 244 |||| Sbjct: 8065 gttg 8068 Score = 186 bits (94), Expect = 4e-44 Identities = 124/134 (92%) Strand = Plus / Plus Query: 240 tgttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggcaggat 299 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 8099 tgttggtgatgacgatggcgacgattcccccctccgggagggaaatttccccggcaggat 8158 Query: 300 cgtcctgccggagctctagattggttctgctcaagttccgcctcatgggggcggcgaaac 359 |||| ||||||||||||||||||| |||||||||||||| || | ||| ||||||||||| Sbjct: 8159 cgtcatgccggagctctagattggatctgctcaagttcctccccgtggcggcggcgaaac 8218 Query: 360 catgaaaaaactcc 373 || |||||| |||| Sbjct: 8219 cacgaaaaagctcc 8232
>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete sequence Length = 113510 Score = 202 bits (102), Expect = 7e-49 Identities = 126/134 (94%) Strand = Plus / Plus Query: 240 tgttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggcaggat 299 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26251 tgttggtgataacgatggcgacgatttccccctccgggagggaagtttccccggcaggat 26310 Query: 300 cgtcctgccggagctctagattggttctgctcaagttccgcctcatgggggcggcgaaac 359 |||||| | ||||||||||||||||||||||||||||||||||| ||| |||||| |||| Sbjct: 26311 cgtcctactggagctctagattggttctgctcaagttccgcctcgtggcggcggcaaaac 26370 Query: 360 catgaaaaaactcc 373 || |||||| |||| Sbjct: 26371 cacgaaaaagctcc 26384 Score = 194 bits (98), Expect = 2e-46 Identities = 140/150 (93%), Gaps = 3/150 (2%) Strand = Plus / Plus Query: 1 gtcctcaggnaacaaaagtaactactgcacaaagcataatacatattcatgattagagag 60 ||||||||| |||||||||||||||| ||||||||||||| |||| ||||||| |||| Sbjct: 26007 gtcctcagg-aacaaaagtaactact-cacaaagcataat-cataatcatgatcagaggt 26063 Query: 61 gtaatgagtagcatcaaggatctgaacataaactcttccaccaaacaatccaactagcat 120 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 26064 gtaatgagtagcatcaaggatctgaacataaactcttccaccaagtaatccaactagcat 26123 Query: 121 caactacaaagagtaatcaacactactagc 150 ||| |||||||||||||||||||||||||| Sbjct: 26124 caattacaaagagtaatcaacactactagc 26153 Score = 113 bits (57), Expect = 5e-22 Identities = 66/69 (95%) Strand = Plus / Plus Query: 176 gcgagatggagattggttacaagtgatgaactagggtttggagatgaaatggtgctgatg 235 |||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 26152 gcgagacggagattggttacaagtgatgaactagggtttggagatgagatggtgccgatg 26211 Query: 236 aagatgttg 244 ||||||||| Sbjct: 26212 aagatgttg 26220 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 241 gttggtgatgacgatggcgacgatttcccc 270 |||||||||||||||||||||||| ||||| Sbjct: 12532 gttggtgatgacgatggcgacgatctcccc 12503 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Plus Query: 392 ttgacgaaacccctcatatagcaaaagagggcagcaagtgggccagcagggtgcccacaa 451 |||||||||||| ||||||||||||||||| || ||||||| || | ||||||||| Sbjct: 26400 ttgacgaaaccctccatatagcaaaagaggggggccagtgggctagtgcgctgcccacaa 26459 Query: 452 gaccccatg 460 | ||||||| Sbjct: 26460 gcccccatg 26468
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 163 bits (82), Expect = 6e-37 Identities = 103/110 (93%) Strand = Plus / Minus Query: 187 attggttacaagtgatgaactagggtttggagatgaaatggtgctgatgaagatgttggt 246 ||||| |||||| ||||||||| ||||| ||||||| ||||||||||||||||||||||| Sbjct: 114503 attggatacaagagatgaactaaggttttgagatgagatggtgctgatgaagatgttggt 114444 Query: 247 gatgacgatggcgacgatttccccctccgggagggaagtttccccggcag 296 |||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 114443 gatgacgatggcgatgatttccccctccgggagggaagtttccctggcag 114394 Score = 111 bits (56), Expect = 2e-21 Identities = 136/156 (87%), Gaps = 5/156 (3%) Strand = Plus / Minus Query: 1 gtcctcaggnaacaaaagtaactactgcacaaagcataatacatattcatgattagagag 60 ||||||||| |||||| ||||||||| ||||||||||| | ||| ||||| || |||| | Sbjct: 993 gtcctcagg-aacaaacgtaactact-cacaaagcatatt-catgttcataatcagaggg 937 Query: 61 gtaatgagta-gcatcaaggatctgaacataaactcttccaccaaacaatccaactagca 119 ||||| |||| |||| ||||||||||||||| | ||||||||| || |||||||||| Sbjct: 936 gtaat-agtatgcataaaggatctgaacatatgattttccaccaagtaaaccaactagca 878 Query: 120 tcaactacaaagagtaatcaacactactagcaacct 155 |||||||||| ||||||||||||||||||||||||| Sbjct: 877 tcaactacaaggagtaatcaacactactagcaacct 842 Score = 93.7 bits (47), Expect = 5e-16 Identities = 131/155 (84%), Gaps = 3/155 (1%) Strand = Plus / Minus Query: 1 gtcctcaggnaacaaaagtaactactgcacaaagcataatacatattcatgattagagag 60 ||||||||| |||||||||||||||| |||||||||||| |||| ||||| || |||| | Sbjct: 114686 gtcctcagg-aacaaaagtaactact-cacaaagcataa-acatgttcataatcagaggg 114630 Query: 61 gtaatgagtagcatcaaggatctgaacataaactcttccaccaaacaatccaactagcat 120 ||| | | |||| |||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 114629 gtattaatatgcatataggatctgaacatatgatcttccatcaattgaaccaactagcat 114570 Query: 121 caactacaaagagtaatcaacactactagcaacct 155 ||||||||| ||||||| ||||||||||||||||| Sbjct: 114569 caactacaacgagtaattaacactactagcaacct 114535 Score = 89.7 bits (45), Expect = 8e-15 Identities = 96/113 (84%) Strand = Plus / Minus Query: 241 gttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggcaggatc 300 ||||||||||||||||| || |||||||||||| |||||||||| |||||||||| | Sbjct: 125842 gttggtgatgacgatggtgatgatttccccctctcggagggaagtgtccccggcagaaca 125783 Query: 301 gtcctgccggagctctagattggttctgctcaagttccgcctcatgggggcgg 353 | |||||||||| |||||||||||| | | |||||||||||||| ||||| Sbjct: 125782 gctctgccggagccctagattggttccaccaaggttccgcctcatggcggcgg 125730 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 187 attggttacaagtgatgaactagggtttggagatgaaatggtgctgatgaagatgttg 244 ||||| |||||| ||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 130300 attggatacaagagatgaactagggtttggagatgagatggtgctggtgaagatgttg 130243 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 241 gttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggcaggatc 300 ||||||||||||||||| || |||||||||||| |||||||||| |||||||||| | Sbjct: 130211 gttggtgatgacgatggtgatgatttccccctctcggagggaagtgtccccggcagaaca 130152 Query: 301 gtcctgccggagctctagattggttc 326 | |||||||||| |||||||||||| Sbjct: 130151 gctctgccggagccctagattggttc 130126 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 187 attggttacaagtgatgaactagggtttggagatgaaatggtgctgatgaagatgttg 244 ||||| |||||| ||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 810 attggatacaagagatgaactagggtttggagatgagatggtgctggtgaagatgttg 753 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 77 aggatctgaacataaactcttccaccaaacaatccaactagcatcaactacaaagagtaa 136 |||||||||||||| |||||||| || || ||||||||||||||||| || |||||| Sbjct: 126041 aggatctgaacatatgatcttccactaattaaaccaactagcatcaactataaggagtaa 125982 Query: 137 tcaacactactagcaacct 155 | ||||||||||||||||| Sbjct: 125981 ttaacactactagcaacct 125963 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 240 tgttggtgatgacgatggcgacgatttccccctccgggagggaagtttcccc 291 |||||||||||| |||| ||| ||||||||||||||||||||||||| |||| Sbjct: 211186 tgttggtgatgatgatgacgatgatttccccctccgggagggaagttccccc 211135 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 240 tgttggtgatgacgatggcgacgatttccccctccgggagggaagtttcccc 291 |||||||||||| |||| ||| ||||||||||||||||||||||||| |||| Sbjct: 58793 tgttggtgatgatgatgacgatgatttccccctccgggagggaagttccccc 58742 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 187 attggttacaagtgatgaactagggtttggagatgaaatggtgctgatgaagatgttg 244 ||||| |||||| ||||||||||||||| ||||||| || || ||||||||||||||| Sbjct: 125931 attggatacaagagatgaactagggttttgagatgatatagttctgatgaagatgttg 125874 Score = 58.0 bits (29), Expect = 3e-05 Identities = 39/41 (95%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 115 tagcatcaactacaaagagtaatcaacactactagcaacct 155 ||||||||||||||| | ||||||||||||||||||||||| Sbjct: 130371 tagcatcaactacaagg-gtaatcaacactactagcaacct 130332 Score = 56.0 bits (28), Expect = 1e-04 Identities = 102/120 (85%), Gaps = 5/120 (4%) Strand = Plus / Minus Query: 1 gtcctcaggnaacaaaagtaactactgcacaaagcataatacatattcatgattagagag 60 ||||||||| |||||| ||||||||| ||||||||||| | ||| ||||| || |||| | Sbjct: 140392 gtcctcagg-aacaaacgtaactact-cacaaagcatatt-catgttcataatcagaggg 140336 Query: 61 gtaatgagta-gcatcaaggatctgaacataaactcttccaccaaacaatccaactagca 119 ||||| |||| |||| ||||||||||||||| ||||||||||| || |||||||||| Sbjct: 140335 gtaat-agtatgcataaaggatctgaacatatgatcttccaccaagtaaaccaactagca 140277 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 262 gatttccccctccgggagggaagtttccccggcaggatcgtcctgccggagctctagatt 321 ||||||||||||| ||||||||| ||||||| || | | |||||||||| ||||||| Sbjct: 700 gatttccccctcccagagggaagtgtccccggtagaacagctctgccggagcactagatt 641 Query: 322 ggttctgctcaagttccgcctcatgggggcgg 353 ||||| || | |||||||||| ||| ||||| Sbjct: 640 ggttccgccaaggttccgcctcgtggcggcgg 609 Score = 54.0 bits (27), Expect = 4e-04 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 194 acaagtgatgaactagggtttggagatgaaatggtgctgatgaagatgttg 244 ||||| ||||||||||||||| ||||||| |||||| || ||||||||||| Sbjct: 211267 acaagagatgaactagggttt-gagatgagatggtgttgttgaagatgttg 211218 Score = 54.0 bits (27), Expect = 4e-04 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 194 acaagtgatgaactagggtttggagatgaaatggtgctgatgaagatgttg 244 ||||| ||||||||||||||| ||||||| |||||| || ||||||||||| Sbjct: 58874 acaagagatgaactagggttt-gagatgagatggtgttgttgaagatgttg 58825 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 69 tagcatcaaggatctgaacataaactcttccaccaaa 105 |||||| | ||||||||||||| | |||||||||||| Sbjct: 211393 tagcataatggatctgaacatataatcttccaccaaa 211357 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 69 tagcatcaaggatctgaacataaactcttccaccaaa 105 |||||| | ||||||||||||| | |||||||||||| Sbjct: 59000 tagcataatggatctgaacatataatcttccaccaaa 58964
>emb|CR626926.1| Aegilops tauschii Length = 94421 Score = 121 bits (61), Expect = 2e-24 Identities = 146/169 (86%), Gaps = 4/169 (2%) Strand = Plus / Minus Query: 1 gtcctcaggnaacaaaagtaactactgcacaaagcataatacatattcatgattagagag 60 ||||||||| |||||| ||||||||| ||||||||||| | ||| ||||| || |||| | Sbjct: 40695 gtcctcagg-aacaaatgtaactact-cacaaagcatatt-catgttcataatcagaggg 40639 Query: 61 gtaatgagtagcatcaaggatctgaacataaactcttccaccaaacaatccaactagcat 120 ||| | | |||| ||||||||||||||| |||||||||||| || ||||||||||| Sbjct: 40638 gtattaatatgcataaaggatctgaacatatgatcttccaccaaataaaccaactagcat 40579 Query: 121 caactacaaagagtaatcaacactactagcaaccttacaagtaccaatc 169 ||||||||| |||||||||||||||||||||||| || ||||||||||| Sbjct: 40578 caactacaaggagtaatcaacactactagcaacc-tataagtaccaatc 40531 Score = 97.6 bits (49), Expect = 3e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 241 gttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggcaggatc 300 |||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| Sbjct: 40423 gttggtgatgacgatggcgatgatttccccctcccggagggaagtttccctggcaggaca 40364 Query: 301 gtcctgccggagctctagattggttctgctcaagttccgcctcatgggggcgg 353 | | ||||||| |||||||||||| || | |||||||||| ||| ||||| Sbjct: 40363 gctccaccggagccctagattggttccgccaaggttccgcctcgtggcggcgg 40311 Score = 52.0 bits (26), Expect = 0.002 Identities = 51/58 (87%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 187 attggttacaagtgatgaactagggtttggagatgaaatggtgctgatgaagatgttg 244 ||||| |||||| |||||||| ||||||| ||| || ||||||||| ||||||||||| Sbjct: 40512 attggatacaagagatgaacttgggtttg-agaggagatggtgctggtgaagatgttg 40456
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence Length = 307015 Score = 113 bits (57), Expect = 5e-22 Identities = 85/93 (91%), Gaps = 1/93 (1%) Strand = Plus / Minus Query: 77 aggatctgaacataaactcttccaccaaacaatccaactagcatcaactacaaagagtaa 136 |||||||||||||| |||||||||||| || |||||||||||||||||||| |||||| Sbjct: 204603 aggatctgaacatatgatcttccaccaaataaaccaactagcatcaactacaaggagtaa 204544 Query: 137 tcaacactactagcaaccttacaagtaccaatc 169 |||||||||||||||||| |||| ||||||||| Sbjct: 204543 tcaacactactagcaacc-tacaggtaccaatc 204512 Score = 101 bits (51), Expect = 2e-18 Identities = 72/79 (91%) Strand = Plus / Minus Query: 76 aaggatctgaacataaactcttccaccaaacaatccaactagcatcaactacaaagagta 135 ||||||||||||||| | ||||||||| | || |||||||||||||||||||| ||||| Sbjct: 206224 aaggatctgaacatataatcttccaccggataaaccaactagcatcaactacaaggagta 206165 Query: 136 atcaacactactagcaacc 154 ||||||||||||||||||| Sbjct: 206164 atcaacactactagcaacc 206146 Score = 101 bits (51), Expect = 2e-18 Identities = 147/175 (84%), Gaps = 3/175 (1%) Strand = Plus / Minus Query: 71 gcatcaaggatctgaacataaactcttccaccaaacaatccaactagcatcaactacaaa 130 |||| ||||||||||||||| | |||||||| | || |||||||||||||||||||| Sbjct: 77549 gcataaaggatctgaacatataatcttccactggataaaccaactagcatcaactacaag 77490 Query: 131 gagtaatcaacactactagcaaccttacaagtaccaatcgga-gtcgcgagatggagatt 189 |||||||||||||||||||||||| ||| ||||||||| || || |||| |||| Sbjct: 77489 gagtaatcaacactactagcaacc-cacaggtaccaatctgaggttttgagacaaagatc 77431 Query: 190 ggttacaagtgatgaactagggtttggagatgaaatggtgctgatgaagatgttg 244 || |||||| ||||||||||||||| |||| || ||||||||| |||||| |||| Sbjct: 77430 ggatacaagagatgaactagggttt-gagaggagatggtgctggtgaagacgttg 77377 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 243 tggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggcaggatcgt 302 ||||||||||||||| |||||||||||||||| ||||||| ||||||||||||| | | Sbjct: 77342 tggtgatgacgatggtgacgatttccccctcctggagggatgtttccccggcagaacagc 77283 Query: 303 cctgccggagctctagattggtt 325 | |||||||| ||||||||||| Sbjct: 77282 tccgccggagccctagattggtt 77260 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 241 gttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggcaggatc 300 |||||||||||| |||| || ||||||||||||| ||||||||||||||||||||| | Sbjct: 204404 gttggtgatgacaatggtgatgatttccccctcccggagggaagtttccccggcagaaca 204345 Query: 301 gtcctgccggagctctagattggttctgctcaagttccgcctcatgggggcgg 353 | | ||| |||| ||||||||||| ||| | |||||||||| ||| ||||| Sbjct: 204344 gctccgccagagccctagattggttttgccaaggttccgcctcgtggcggcgg 204292 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 94 tcttccaccaaacaatccaactagcatcaactacaaagagtaatcaacactactagcaac 153 |||||||||||| || |||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 63259 tcttccaccaaataaaccaacttgcatcaactacaagatgtaatcaacactactagcaac 63318 Query: 154 c 154 | Sbjct: 63319 c 63319 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 240 tgttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggc 294 |||||||||||| |||| ||| |||||||||||||||||||||||| ||||||| Sbjct: 213002 tgttggtgatgatgatgacgatgatttccccctccgggagggaagtacccccggc 213056 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 243 tggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggcag 296 ||||||||| ||||| |||||||||||||||| ||||||| |||||||| |||| Sbjct: 206022 tggtgatgatgatggtgacgatttccccctcccggagggatgtttccccagcag 205969 Score = 60.0 bits (30), Expect = 7e-06 Identities = 52/58 (89%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 187 attggttacaagtgatgaactagggtttggagatgaaatggtgctgatgaagatgttg 244 ||||| |||||| ||||||||||||||| |||| || ||||||||| ||||||||||| Sbjct: 204493 attggatacaagagatgaactagggttt-gagaggagatggtgctggtgaagatgttg 204437 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 241 gttggtgatgacgatggcgacgatttccccctccgggagggaagtt 286 |||||||||| ||||||| |||||||||||||| ||||||||||| Sbjct: 63441 gttggtgatgtcgatggcttcgatttccccctccaggagggaagtt 63486 Score = 40.1 bits (20), Expect = 6.4 Identities = 39/44 (88%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 201 atgaactagggtttggagatgaaatggtgctgatgaagatgttg 244 |||||||||||| || |||||| |||||| || ||||||||||| Sbjct: 63366 atgaactagggtctg-agatgagatggtgttggtgaagatgttg 63408
>gb|DQ386610.1| Hordeum vulgare subsp. vulgare protein kinase ABC1063 gene, complete cds Length = 7813 Score = 99.6 bits (50), Expect = 8e-18 Identities = 142/170 (83%), Gaps = 2/170 (1%) Strand = Plus / Plus Query: 76 aaggatctgaacataaactcttccaccaaacaatccaactagcatcaactacaaagagta 135 |||||||| |||||| ||||||||||| || |||||||||||||||||||| ||||| Sbjct: 265 aaggatctaaacatacgatcttccaccaagtaaaccaactagcatcaactacaaggagta 324 Query: 136 atcaacactactagcaaccttacaagtaccaatcgga-gtcgcgagatggagattggtta 194 ||||||||||||||||||| ||| ||||||||| || || || | |||| || || Sbjct: 325 atcaacactactagcaacc-cacaggtaccaatctgaggttttgaaacaaagatcggata 383 Query: 195 caagtgatgaactagggtttggagatgaaatggtgctgatgaagatgttg 244 |||| || ||||||||||| ||||| || |||||||| |||||||||||| Sbjct: 384 caagagacgaactagggttcggagaggagatggtgctaatgaagatgttg 433 Score = 93.7 bits (47), Expect = 5e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 241 gttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggcaggatc 300 ||||||||||| |||||| |||||||||||||||||||||||||||||| |||| || Sbjct: 466 gttggtgatgatgatggcttcgatttccccctccgggagggaagtttcccgagcagaata 525 Query: 301 gtcctgccggagctctagattggttct 327 | | |||||||||||||||||||||| Sbjct: 526 gctccgccggagctctagattggttct 552
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 77 aggatctgaacataaactcttccaccaaacaatccaactagcatcaactacaaagagtaa 136 ||||||| |||||| | ||||||||||| || |||||||||||||||||||| |||| Sbjct: 36695 aggatctaaacatataatcttccaccaagtaaaccaactagcatcaactacaagatgtaa 36754 Query: 137 tcaacactactagcaac 153 ||||||||||||||||| Sbjct: 36755 tcaacactactagcaac 36771 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 261 cgatttccccctccgggagggaagtttccccgg 293 |||||||||||||| |||||||||| ||||||| Sbjct: 39766 cgatttccccctcccggagggaagtatccccgg 39798 Score = 48.1 bits (24), Expect = 0.026 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 193 tacaagtgatgaactagggtttggagatgaaatggtgctgatgaagatgttg 244 |||||| ||||||||||||||| ||| ||| |||||| || ||||||||||| Sbjct: 36811 tacaagagatgaactagggttt-gaggtgagatggtgttggtgaagatgttg 36861
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 94 tcttccaccaaacaatccaactagcatcaactacaaagagtaatcaacactactagcaac 153 |||||||||||| || |||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 17778 tcttccaccaaataaaccaacttgcatcaactacaagatgtaatcaacactactagcaac 17837 Query: 154 c 154 | Sbjct: 17838 c 17838 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 240 tgttggtgatgacgatggcgacgatttccccctccgggagggaagtttcccc 291 |||||||||||| |||| ||| ||||||||||| ||||||||||||| |||| Sbjct: 239440 tgttggtgatgatgatgacgatgatttccccctacgggagggaagttccccc 239491 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 242 ttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccg 292 ||||||||| ||||||| ||||||| |||||| ||||||||||| ||||| Sbjct: 17961 ttggtgatgtcgatggcttcgatttctccctcccggagggaagttaccccg 18011 Score = 48.1 bits (24), Expect = 0.026 Identities = 79/96 (82%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 55 agagaggtaatgagtagcatcaaggatctgaacataaactcttccaccaaacaatccaac 114 |||| |||| ||| |||||| | ||||||||||||| | | |||||||||| || ||| Sbjct: 239220 agaggggtattgaatagcataatggatctgaacatataattttccaccaaataaaccata 239279 Query: 115 tagca-tcaactacaaagagtaatcaacactactag 149 ||| | |||||||||| ||||||||||||||||| Sbjct: 239280 tagtaatcaactacaagatgtaatcaacactactag 239315 Score = 46.1 bits (23), Expect = 0.10 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 193 tacaagtgatgaactagggtttggagatgaaatggtgctgatgaagatgtt 243 |||||| ||||||||||||||| ||||||| ||||| || |||||||||| Sbjct: 17877 tacaagagatgaactagggttt-gagatgagatggtcttggtgaagatgtt 17926 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 240 tgttggtgatgacgatggcgacgatttccccctccggg 277 |||||||||||| |||| ||| || ||||||||||||| Sbjct: 258558 tgttggtgatgatgatgacgatgacttccccctccggg 258595
>emb|X03042.2|TAGLU1AG Triticum aestivum Ay gene for high-molecular-weight glutenin Length = 8117 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 94 tcttccaccaaacaatccaactagcatcaactacaaagagtaatcaacactactagcaac 153 |||||||||||| || |||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 5315 tcttccaccaaataaaccaacttgcatcaactacaagatgtaatcaacactactagcaac 5374 Query: 154 c 154 | Sbjct: 5375 c 5375 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 241 gttggtgatgacgatggcgacgatttccccctccgggagggaagtt 286 |||||||||| ||||||| |||||||||||||| ||||||||||| Sbjct: 5497 gttggtgatgtcgatggcttcgatttccccctccaggagggaagtt 5542 Score = 40.1 bits (20), Expect = 6.4 Identities = 39/44 (88%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 201 atgaactagggtttggagatgaaatggtgctgatgaagatgttg 244 |||||||||||| || |||||| |||||| || ||||||||||| Sbjct: 5422 atgaactagggtctg-agatgagatggtgttggtgaagatgttg 5464
>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence Length = 142018 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 240 tgttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggc 294 |||||||||||| || | ||| ||||||||||||||||||||||||| ||||||| Sbjct: 60498 tgttggtgatgatgaggacgatgatttccccctccgggagggaagttcccccggc 60444 Score = 44.1 bits (22), Expect = 0.41 Identities = 68/82 (82%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 69 tagcatcaaggatctgaacataaactcttccaccaaacaatccaactagca-tcaactac 127 |||||| | |||||| |||||| | |||||||||||| || ||| ||| | |||||||| Sbjct: 60705 tagcataatggatctaaacatataatcttccaccaaataaaccatatagtaatcaactac 60646 Query: 128 aaagagtaatcaacactactag 149 || ||||||||||||||||| Sbjct: 60645 aagatgtaatcaacactactag 60624
>gb|AF497474.1| Aegilops tauschii leucine-rich-like protein gene, partial cds; seed globulin (Glo-2) gene, complete cds; HMW-glutenin (Glu-Dty) gene, Glu-Dty-T2 allele, complete cds; and HMW-glutenin (HMW) gene, HMW-Dtx2 allele, complete cds Length = 102842 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 81 tctgaacataaactcttccaccaaacaatccaactagcatcaactacaaagagtaatcaa 140 ||||||||| | |||||||||||| || |||||| ||||||| ||||| |||||||| Sbjct: 10720 tctgaacatttaatcttccaccaaataaaccaacttgcatcaagtacaagatgtaatcaa 10779 Query: 141 cactactagcaacc 154 |||||||||||||| Sbjct: 10780 cactactagcaacc 10793 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 241 gttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccggcaggatc 300 |||||||||| ||||||| |||||||||||||| ||||||| ||| ||||||||| ||| Sbjct: 10915 gttggtgatgtcgatggcttcgatttccccctcccggagggaggttaccccggcagaatc 10974 Query: 301 g 301 | Sbjct: 10975 g 10975
>emb|X12929.2|TAGLD12B Triticum aestivum Glu-D1-2b gene for high molecular weight glutenin subunit 10 Length = 6462 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 81 tctgaacataaactcttccaccaaacaatccaactagcatcaactacaaagagtaatcaa 140 ||||||||| | |||||||||||| || |||||| ||||||| ||||| |||||||| Sbjct: 5873 tctgaacatttaatcttccaccaaataaaccaacttgcatcaagtacaagatgtaatcaa 5932 Query: 141 cactactagcaacc 154 |||||||||||||| Sbjct: 5933 cactactagcaacc 5946
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 110 ccaactagcatcaactacaaagagtaatcaacactactagcaac 153 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 205269 ccaactagcatcaactacaagatgtaatcaacactactagcaac 205226 Score = 48.1 bits (24), Expect = 0.026 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 193 tacaagtgatgaactagggtttggagatgaaatggtgctgatgaagatgttg 244 |||||| ||||||||||||||| ||| ||| |||||| || ||||||||||| Sbjct: 205186 tacaagagatgaactagggttt-gaggtgagatggtgttggtgaagatgttg 205136
>gb|AY582538.1| Secale cereale chromosome 5 RAPD marker OPB20 sequence Length = 739 Score = 63.9 bits (32), Expect = 4e-07 Identities = 116/140 (82%), Gaps = 3/140 (2%) Strand = Plus / Minus Query: 11 aacaaaagtaactactgcacaaagcataatacatattcatgattagagaggtaatgagta 70 |||||||||||||||| ||||| |||| |||| |||||||| |||| | || ||| || Sbjct: 504 aacaaaagtaactact-cacaagtgataa-acatgttcatgatcagagggctattgaata 447 Query: 71 gcatcaaggatctgaacataaactcttccaccaaacaatccaactag-catcaactacaa 129 |||| | ||||||||||||| | |||||||||||| || ||| ||| ||||||||||| Sbjct: 446 gcataacggatctgaacatacaatcttccaccaaataaaccatatagtgatcaactacaa 387 Query: 130 agagtaatcaacactactag 149 ||||||||||||||||| Sbjct: 386 gatgtaatcaacactactag 367 Score = 44.1 bits (22), Expect = 0.41 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 194 acaagtgatgaactagggtttggagatgaaatggtgct 231 ||||| ||||||||||||||| |||| ||||||||||| Sbjct: 322 acaagagatgaactagggttt-gagaggaaatggtgct 286
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 194 acaagtgatgaactagggtttggagatgaaatggtgctgatgaagatg 241 ||||| ||||||||||||||| |||| || ||||||||| |||||||| Sbjct: 25561 acaagagatgaactagggttttgagaggagatggtgctgttgaagatg 25514 Score = 46.1 bits (23), Expect = 0.10 Identities = 84/103 (81%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 47 tcatgattagagaggtaatgagtagcatcaaggatctgaacataaactcttccaccaaac 106 ||||||| ||||||||| | | |||||| | ||||||||||| |||||||||||| Sbjct: 25706 tcatgatcagagaggtattaaatagcatattgaatctgaacatatgatcttccaccaaat 25647 Query: 107 aatccaactagcatcaactacaaagagtaatcaacactactag 149 || |||| |||||||||||||| || |||||||||||||| Sbjct: 25646 aaaccaaa-agcatcaactacaagatgttatcaacactactag 25605 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 240 tgttggtgatgacgatggcgacgatttccccctccgggagggaagtttccccg 292 |||||| |||||| ||||| ||||||||| || | ||||||||||| ||||| Sbjct: 25479 tgttggcgatgacaatggcctcgatttcccacttcaggagggaagttcccccg 25427
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 240 tgttggtgatgacgatggcgacgatttccccctccgggagggaagtt 286 ||||||||||||||||||| |||||||| ||||| |||||||||| Sbjct: 41904 tgttggtgatgacgatggcttcgatttccttctccgagagggaagtt 41858
>gb|AC015450.5|AC015450 Arabidopsis thaliana chromosome 1 BAC F14G6 genomic sequence, complete sequence Length = 100806 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 224 atggtgctgatgaagatgttggtgatgacgatg 256 |||||| ||||||||| |||||||||||||||| Sbjct: 25404 atggtgatgatgaagaagttggtgatgacgatg 25436
>gb|AC012394.3|AC012394 Arabidopsis thaliana chromosome 1 BAC F15M4 genomic sequence, complete sequence Length = 94487 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 224 atggtgctgatgaagatgttggtgatgacgatg 256 |||||| ||||||||| |||||||||||||||| Sbjct: 16359 atggtgatgatgaagaagttggtgatgacgatg 16327
>emb|AL358949.16| Human DNA sequence from clone RP11-302K6 on chromosome 10 Contains part of the gene for VPS10 domain receptor protein SORCS 3 (SORCS3), complete sequence Length = 166563 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 31 aaagcataatacatattcatgatt 54 |||||||||||||||||||||||| Sbjct: 113384 aaagcataatacatattcatgatt 113361
>ref|XM_453670.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D13618g predicted mRNA Length = 1593 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 234 tgaagatgttggtgatgacgatg 256 ||||||||||||||||||||||| Sbjct: 282 tgaagatgttggtgatgacgatg 304
>gb|AC091134.7| Homo sapiens chromosome 17, clone RP11-646F1, complete sequence Length = 156583 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 411 agcaaaagagggcagcaagtggg 433 ||||||||||||||||||||||| Sbjct: 87926 agcaaaagagggcagcaagtggg 87904
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 234 tgaagatgttggtgatgacgatg 256 ||||||||||||||||||||||| Sbjct: 1175388 tgaagatgttggtgatgacgatg 1175366
>gb|AC008756.9| Homo sapiens chromosome 16 clone CTD-3028M10, complete sequence Length = 173527 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 231 tgatgaagatgttggtgatgacgatgg 257 ||||||||||||||||||||| ||||| Sbjct: 58033 tgatgaagatgttggtgatgatgatgg 58059
>gb|AC131055.10| Homo sapiens chromosome 17, clone RP11-846F4, complete sequence Length = 187223 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 411 agcaaaagagggcagcaagtggg 433 ||||||||||||||||||||||| Sbjct: 103726 agcaaaagagggcagcaagtggg 103704
>gb|AC107940.13| Homo sapiens chromosome 17, clone RP11-158C19, complete sequence Length = 164186 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 411 agcaaaagagggcagcaagtggg 433 ||||||||||||||||||||||| Sbjct: 144142 agcaaaagagggcagcaagtggg 144164
>gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece Length = 120562 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 241 gttggtgatgacgatggcgacgatttcccc 270 |||||||||||||| | ||||||||||||| Sbjct: 100963 gttggtgatgacgacgacgacgatttcccc 100934
>gb|AC127434.1| Mus musculus BAC clone RP23-189J11 from 19, complete sequence Length = 199422 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 33 agcataatacatattcatgatt 54 |||||||||||||||||||||| Sbjct: 166982 agcataatacatattcatgatt 167003
>emb|BX936346.4| Human DNA sequence from clone WI2-88778H2 on chromosome X Contains the 5' end of the FLNA gene for filamin A, alpha (actin binding protein 280), two artifact genes, the EMD gene for emerin (Emery-Dreifuss muscular dystrophy), a TEC gene, the 5' end of the RPL10 gene for ribosomal protein L10 and four CpG islands, complete sequence Length = 40233 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 412 gcaaaagagggcagcaagtgggccag 437 ||||||||||| |||||||||||||| Sbjct: 21701 gcaaaagaggggagcaagtgggccag 21676
>emb|AL353150.25| Human DNA sequence from clone RP11-82L18 on chromosome 9 Contains the 3' end of a novel gene (SHC3) and a novel gene, complete sequence Length = 113051 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 tggtgatgacgatggcgacgat 264 |||||||||||||||||||||| Sbjct: 32714 tggtgatgacgatggcgacgat 32693
>gb|AC105515.5| Rattus norvegicus 14 BAC CH230-13H11 (Children's Hospital Oakland Research Institute) complete sequence Length = 221805 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 224 atggtgctgatgaagatgttggtgatgacgatgg 257 |||||| |||||| |||| ||||||||||||||| Sbjct: 40974 atggtgatgatgatgatgatggtgatgacgatgg 41007
>emb|AL138698.15| Human DNA sequence from clone RP11-393H6 on chromosome 13q21.33-22.3 Contains part of the DACH gene for dachshund homolog (Drosophila) (DACH1 FLJ10138), a H3 histone family pseudogene and a ribosomal protein L21 (RPL21) pseudogene, complete sequence Length = 102371 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 aactagggtttggagatgaaat 225 |||||||||||||||||||||| Sbjct: 49688 aactagggtttggagatgaaat 49709
>gb|AC012417.13| Homo sapiens chromosome 18, clone RP11-408H20, complete sequence Length = 181552 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 224 atggtgctgatgaagatgttggtgatgacgatgg 257 ||||||||||||| |||| ||||||||| ||||| Sbjct: 38964 atggtgctgatgatgatgctggtgatgatgatgg 38997
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 tggtgatgacgatggcgacgat 264 |||||||||||||||||||||| Sbjct: 775945 tggtgatgacgatggcgacgat 775924
>gb|AC160960.5| Mus musculus BAC clone RP24-230O19 from chromosome 13, complete sequence Length = 152915 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 231 tgatgaagatgttggtgatgacgatg 256 ||||||||||| |||||||||||||| Sbjct: 139440 tgatgaagatgatggtgatgacgatg 139415
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete sequence; splicing factor SF2-like protein (SF2) and universal stress protein (USP1) genes and Hv receptor-kinase-like pseudogene, complete cds; and retrotransposons Sandra6 and Sandra7, complete sequence Length = 82293 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 241 gttggtgatgacgatggcgacgatttcccc 270 |||| ||||||||||||| ||||||||||| Sbjct: 2292 gttgatgatgacgatggccacgatttcccc 2321
>gb|AF293358.1|AF293358 Homo sapiens desmocollin 1 (DSC1) gene, complete cds, alternatively spliced Length = 33297 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 224 atggtgctgatgaagatgttggtgatgacgatgg 257 ||||||||||||| |||| ||||||||| ||||| Sbjct: 12365 atggtgctgatgatgatgctggtgatgatgatgg 12398
>gb|AC007428.5|AC007428 Homo sapiens, clone RP11-69A1, complete sequence Length = 156180 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 aactagggtttggagatgaaat 225 |||||||||||||||||||||| Sbjct: 24934 aactagggtttggagatgaaat 24955
>gb|AC154266.2| Mus musculus BAC clone RP24-321J24 from 13, complete sequence Length = 183555 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 231 tgatgaagatgttggtgatgacgatg 256 ||||||||||| |||||||||||||| Sbjct: 39040 tgatgaagatgatggtgatgacgatg 39015
>gb|L44140.1|HUMFLNG6PD Homo sapiens chromosome X region from filamin (FLN) gene to glucose-6-phosphate dehydrogenase (G6PD) gene, complete cds's Length = 219447 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 412 gcaaaagagggcagcaagtgggccag 437 ||||||||||| |||||||||||||| Sbjct: 51332 gcaaaagaggggagcaagtgggccag 51307
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 241 gttggtgatgacgatggcgacgattt 266 |||| ||||||||||||||||||||| Sbjct: 46997 gttgatgatgacgatggcgacgattt 47022
>dbj|D64111.1|HUMSTA Homo sapiens DNA for emerin, complete cds Length = 1762 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 412 gcaaaagagggcagcaagtgggccag 437 ||||||||||| |||||||||||||| Sbjct: 1389 gcaaaagaggggagcaagtgggccag 1364
>gb|AC005771.1|AC005771 Homo sapiens chromosome 17, clone hRPK.1058_G_23, complete sequence Length = 190434 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 37 taatacatattcatgattagag 58 |||||||||||||||||||||| Sbjct: 133185 taatacatattcatgattagag 133164
>gb|AC108138.6| Homo sapiens chromosome 18, clone RP11-235B21, complete sequence Length = 57830 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 224 atggtgctgatgaagatgttggtgatgacgatgg 257 ||||||||||||| |||| ||||||||| ||||| Sbjct: 57475 atggtgctgatgatgatgctggtgatgatgatgg 57508 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 224 atggtgctgatgaagatgttggtgatgacgatg 256 ||||||||||||| |||| ||||||||| |||| Sbjct: 57727 atggtgctgatgatgatgctggtgatgatgatg 57759
>emb|X86810.1|HSEDMDGEN Homo sapiens EDMD gene Length = 3339 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 412 gcaaaagagggcagcaagtgggccag 437 ||||||||||| |||||||||||||| Sbjct: 2224 gcaaaagaggggagcaagtgggccag 2199
>ref|XM_629528.1| Dictyostelium discoideum TFIID subunit (DDB0231041), partial mRNA Length = 9015 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 gatgaagatgttggtgatgacgatg 256 ||||||||||||| ||||||||||| Sbjct: 8447 gatgaagatgttgatgatgacgatg 8423
>gb|AC120388.11| Mus musculus chromosome 9, clone RP24-300P2, complete sequence Length = 157596 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 atggtgctgatgaagatgttggtga 248 |||||||||||||||||| |||||| Sbjct: 18607 atggtgctgatgaagatgatggtga 18631
>gb|AC131725.2| Mus musculus BAC clone RP23-129H16 from chromosome 5, complete sequence Length = 203437 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 tgatgaagatgttggtgatga 251 ||||||||||||||||||||| Sbjct: 131104 tgatgaagatgttggtgatga 131084
>gb|AC124374.5| Mus musculus BAC clone RP24-567K8 from chromosome 5, complete sequence Length = 181395 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 tgatgaagatgttggtgatga 251 ||||||||||||||||||||| Sbjct: 56141 tgatgaagatgttggtgatga 56161
>ref|XM_750405.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g11660) partial mRNA Length = 2754 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 tggtgatgacgatggcgacga 263 ||||||||||||||||||||| Sbjct: 2469 tggtgatgacgatggcgacga 2489
>emb|AL035468.3|HS424E5 Human DNA sequence from clone RP3-424E5 on chromosome 6q13-14.3, complete sequence Length = 93805 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 129 aagagtaatcaacactactagcaac 153 ||||| ||||||||||||||||||| Sbjct: 74915 aagagaaatcaacactactagcaac 74891
>emb|BX572608.1| Rhodopseudomonas palustris CGA009 complete genome; segment 16/16 Length = 227214 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 tggtgatgacgatggcgacga 263 ||||||||||||||||||||| Sbjct: 130899 tggtgatgacgatggcgacga 130919
>emb|AL731694.12| Mouse DNA sequence from clone RP23-138G17 on chromosome 11 Contains a novel pseudogene, complete sequence Length = 131697 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 tgctgatgaagatgttggtga 248 ||||||||||||||||||||| Sbjct: 106589 tgctgatgaagatgttggtga 106569
>gb|AC161570.6| Mus musculus chromosome 5, clone RP23-36O9, complete sequence Length = 228402 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 tgatgaagatgttggtgatga 251 ||||||||||||||||||||| Sbjct: 75534 tgatgaagatgttggtgatga 75514
>gb|AC099058.2| Homo sapiens chromosome 3 clone RP11-714G12, complete sequence Length = 196623 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 224 atggtgctgatgaagatgttggtgatgac 252 |||||| |||||| ||||||||||||||| Sbjct: 48551 atggtgatgatgatgatgttggtgatgac 48523
>gb|DQ380786.1| Drupadia theda clone DTH075 microsatellite sequence Length = 405 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 229 gctgatgaagatgttggtgatgacgatgg 257 |||||||| |||||||||||||| ||||| Sbjct: 99 gctgatgatgatgttggtgatgatgatgg 71
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 240 tgttggtgatgacgatggcgacgat 264 ||||||||||||||| ||||||||| Sbjct: 1953038 tgttggtgatgacgaaggcgacgat 1953062 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 240 tgttggtgatgacgatggcgacgat 264 ||||||||||||||| ||||||||| Sbjct: 364501 tgttggtgatgacgaaggcgacgat 364525
>emb|BX649347.3| Zebrafish DNA sequence from clone DKEY-14K9 in linkage group 4, complete sequence Length = 110100 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 acaaagcataatacatattca 49 ||||||||||||||||||||| Sbjct: 69475 acaaagcataatacatattca 69455
>ref|XM_633890.1| Dictyostelium discoideum hypothetical protein (DDB0191443), partial mRNA Length = 2487 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 225 tggtgctgatgaagatgttggtgatgacgatg 256 ||||| ||||||||||| ||||||||| |||| Sbjct: 1191 tggtgttgatgaagatgatggtgatgatgatg 1160
>gb|AC132617.4| Mus musculus BAC clone RP23-230A6 from chromosome 12, complete sequence Length = 239046 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 224 atggtgctgatgaagatgttggtgatga 251 |||||| ||||||||||| ||||||||| Sbjct: 140676 atggtggtgatgaagatgatggtgatga 140703
>gb|AC011761.15| Drosophila melanogaster clone BACH50G05, complete sequence Length = 108727 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 agcaaaagagggcagcaagt 430 |||||||||||||||||||| Sbjct: 7582 agcaaaagagggcagcaagt 7563
>ref|XM_607623.2| PREDICTED: Bos taurus similar to Mitogen-activated protein kinase 4 (Extracellular signal-regulated kinase 4) (ERK-4) (LOC529183), mRNA Length = 1767 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ggtgctgatgaagatgttgg 245 |||||||||||||||||||| Sbjct: 477 ggtgctgatgaagatgttgg 458
>ref|XM_380252.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00076.1) partial mRNA Length = 1431 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 gtgctgatgaagatgttggt 246 |||||||||||||||||||| Sbjct: 758 gtgctgatgaagatgttggt 739
>gb|AC131103.4| Mus musculus BAC clone RP23-213K14 from chromosome 19, complete sequence Length = 210370 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aaagcataatacatattcat 50 |||||||||||||||||||| Sbjct: 25381 aaagcataatacatattcat 25400
>ref|XM_809221.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507709.120) partial mRNA Length = 4065 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 233 atgaagatgttggtgatgacgatggcga 260 |||| |||| |||||||||||||||||| Sbjct: 350 atgatgatgatggtgatgacgatggcga 377
>gb|AC123921.3| Mus musculus BAC clone RP24-180J14 from chromosome 8, complete sequence Length = 183936 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 tgatgaagatgttggtgatgacga 254 ||||||||||| |||||||||||| Sbjct: 119082 tgatgaagatgatggtgatgacga 119105
>gb|AC009171.6| Homo sapiens chromosome 16 clone RP11-95P2, complete sequence Length = 175022 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 223 aatggtgctgatgaagatgttggtgatgacga 254 ||||||| |||||| |||| |||||||||||| Sbjct: 87208 aatggtggtgatgatgatgatggtgatgacga 87239
>gb|AY395687.1| Escherichia coli strain BEN2908 pathogenicity island AGI-1, complete sequence Length = 29505 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 gcagcaagtgggccagcagg 441 |||||||||||||||||||| Sbjct: 22404 gcagcaagtgggccagcagg 22385
>gb|AC011899.5| Homo sapiens BAC clone RP11-452C13 from 7, complete sequence Length = 214229 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 atggtgctgatgaagatgttggtgatga 251 |||||| ||||||||||| ||||||||| Sbjct: 146221 atggtggtgatgaagatgatggtgatga 146194 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 atggtgctgatgaagatgttggtgatga 251 |||||| ||||||||||| ||||||||| Sbjct: 145942 atggtggtgatgaagatgatggtgatga 145915
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 gcagcaagtgggccagcagg 441 |||||||||||||||||||| Sbjct: 250044 gcagcaagtgggccagcagg 250063
>emb|AL583807.20| Human DNA sequence from clone RP11-105C7 on chromosome 9 Contains the 5' end of the LAMC3 gene for laminin gamma 3 and a CpG island, complete sequence Length = 92607 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 atggtgctgatgaagatgttggtgatga 251 ||||||||||||| |||| ||||||||| Sbjct: 4228 atggtgctgatgatgatgatggtgatga 4201
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 tggtgctgatgaagatgttg 244 |||||||||||||||||||| Sbjct: 1640660 tggtgctgatgaagatgttg 1640641
>emb|AL139254.23| Human DNA sequence from clone RP4-749H3 on chromosome 1p35.1-36 Contains a novel gene (LOC339505), complete sequence Length = 120455 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 atggtgctgatgaagatgttggtgatga 251 |||||| |||||| |||||||||||||| Sbjct: 103873 atggtggtgatgatgatgttggtgatga 103846
>gb|AC110418.7| Homo sapiens 3 BAC RP11-711F20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 148914 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gattggttctgctcaagttc 337 |||||||||||||||||||| Sbjct: 146599 gattggttctgctcaagttc 146618
>gb|AC046142.28| Homo sapiens 3 BAC RP11-550P14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187927 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 tgctgatgaagatgttggtgatga 251 |||||||||||||| ||||||||| Sbjct: 147478 tgctgatgaagatgatggtgatga 147455
>gb|AC073493.27| Homo sapiens Xp BAC RP11-631N21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 211422 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 224 atggtgctgatgaagatgttggtgatga 251 |||||| |||||| |||||||||||||| Sbjct: 178346 atggtggtgatgatgatgttggtgatga 178373
>emb|X73901.1|DBPMA1 D.bioculata mRNA for plasma-membrane ATPase Length = 4624 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 tgatgaagatgttggtgatg 250 |||||||||||||||||||| Sbjct: 2237 tgatgaagatgttggtgatg 2218
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 gtgatgacgatggcgacgat 264 |||||||||||||||||||| Sbjct: 114513 gtgatgacgatggcgacgat 114532
>gb|AC116903.3| Homo sapiens chromosome 15, clone RP11-152L20, complete sequence Length = 159893 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 tgctgatgaagatgttggtgatga 251 |||||||||||||| ||||||||| Sbjct: 4544 tgctgatgaagatgatggtgatga 4521
>gb|AC123983.8| Pan troglodytes clone rp43-42n4, complete sequence Length = 187806 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 tgctgatgaagatgttggtgatga 251 |||||||||||||| ||||||||| Sbjct: 80490 tgctgatgaagatgatggtgatga 80467
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 gttggtgatgacgatggcgacgat 264 |||| ||||||||||||||||||| Sbjct: 919567 gttgatgatgacgatggcgacgat 919544
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 224 atggtgctgatgaagatgttggtgatga 251 |||||| |||||||||||||| |||||| Sbjct: 194791 atggtggtgatgaagatgttgttgatga 194818
>gb|AY254474.1| Dictyostelium discoideum frizzled protein (frzA) gene, complete cds Length = 3334 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 225 tggtgctgatgaagatgttggtgatgacgatg 256 ||||| ||||||||||| ||||||||| |||| Sbjct: 1701 tggtgttgatgaagatgatggtgatgatgatg 1670
>ref|NG_001165.1| Homo sapiens nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 5 (NPM1P5) on chromosome 15 Length = 1015 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 tgctgatgaagatgttggtgatga 251 |||||||||||||| ||||||||| Sbjct: 671 tgctgatgaagatgatggtgatga 694
>gb|AC010917.16|AC010917 Drosophila melanogaster, chromosome X, region 19E-19E, BAC clone BACR28L06, complete sequence Length = 174820 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 agcaaaagagggcagcaagt 430 |||||||||||||||||||| Sbjct: 36160 agcaaaagagggcagcaagt 36179
>gb|AC171128.2| Helobdella robusta clone CH306-1A10, complete sequence Length = 76716 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 225 tggtgctgatgaagatgttggtgatgacgatg 256 ||||| |||||| |||||||||||||| |||| Sbjct: 5959 tggtgatgatgatgatgttggtgatgatgatg 5990
>gb|AC139844.11| Mus musculus chromosome 15, clone RP23-342B21, complete sequence Length = 192176 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 225 tggtgctgatgaagatgttggtgatgacgatg 256 ||||| |||||| |||| |||||||||||||| Sbjct: 93355 tggtggtgatgatgatgatggtgatgacgatg 93324
>gb|AC073149.5| Homo sapiens BAC clone RP11-803F15 from 2, complete sequence Length = 99685 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atgagtagcatcaaggatct 83 |||||||||||||||||||| Sbjct: 35806 atgagtagcatcaaggatct 35787
>gb|AC116162.5| Homo sapiens chromosome 15, clone RP11-268L17, complete sequence Length = 160580 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 tgctgatgaagatgttggtgatga 251 |||||||||||||| ||||||||| Sbjct: 109177 tgctgatgaagatgatggtgatga 109154
>gb|AF175507.1|AF175507 Eucalyptus camaldulensis outward-rectifying potassium channel KCO1 mRNA, complete cds Length = 1445 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 aaaccatgaaaaaactcctc 375 |||||||||||||||||||| Sbjct: 1314 aaaccatgaaaaaactcctc 1295
>emb|AL713977.13| Mouse DNA sequence from clone RP23-303A21 on chromosome X, complete sequence Length = 159014 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 aacataaactcttccaccaa 104 |||||||||||||||||||| Sbjct: 72568 aacataaactcttccaccaa 72549
>gb|AC009716.22| Homo sapiens chromosome 18, clone RP11-504I13, complete sequence Length = 211981 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 234 tgaagatgttggtgatgacgatgg 257 |||||||| ||||||||||||||| Sbjct: 141138 tgaagatggtggtgatgacgatgg 141115
>ref|NM_208671.1| Eremothecium gossypii ACL086Cp (ACL086C), mRNA Length = 3624 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 atggtgctgatgaagatgttggtgatga 251 |||||| |||||||||||||| |||||| Sbjct: 1569 atggtggtgatgaagatgttgttgatga 1542
>gb|AC155268.1| Mus musculus BAC clone RP23-204K22 from 16, complete sequence Length = 218381 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 225 tggtgctgatgaagatgttggtgatgacgatg 256 ||||| |||||| |||| |||||||||||||| Sbjct: 53665 tggtggtgatgatgatgatggtgatgacgatg 53696
>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00 Length = 1457619 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 gaaaccatgaaaaaactcctcctt 378 ||||||||||||||||| |||||| Sbjct: 229507 gaaaccatgaaaaaactactcctt 229530
>emb|AL929520.17| Zebrafish DNA sequence from clone CH211-134D13 in linkage group 3, complete sequence Length = 160253 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 tgctgatgaagatgttggtgatga 251 ||||||||||||||||| |||||| Sbjct: 109679 tgctgatgaagatgttgatgatga 109702
>gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 of 74 of the complete sequence Length = 300051 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 agcaaaagagggcagcaagt 430 |||||||||||||||||||| Sbjct: 97396 agcaaaagagggcagcaagt 97415
>gb|AC108421.8| Mus musculus chromosome 19, clone RP23-433N7, complete sequence Length = 190980 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aaagcataatacatattcat 50 |||||||||||||||||||| Sbjct: 132693 aaagcataatacatattcat 132712
>dbj|AP005401.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-60H9, complete sequence Length = 75877 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 225 tggtgctgatgaagatgttggtgatgac 252 ||||| ||||||||||| |||||||||| Sbjct: 40205 tggtgatgatgaagatgatggtgatgac 40232
>dbj|AP003967.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-183G19, complete sequence Length = 172883 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 225 tggtgctgatgaagatgttggtgatgac 252 ||||| ||||||||||| |||||||||| Sbjct: 17715 tggtgatgatgaagatgatggtgatgac 17742
>dbj|AP006687.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT41F23, TM0382, complete sequence Length = 99748 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cacaaagcataatacatattcatg 51 ||||||||||||||||||| |||| Sbjct: 90200 cacaaagcataatacatatccatg 90223
>emb|AL807384.5| Mouse DNA sequence from clone RP23-18F9 on chromosome 2, complete sequence Length = 218815 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 225 tggtgctgatgaagatgttggtgatgacgatg 256 ||||| ||||||||||| ||||||||| |||| Sbjct: 35171 tggtgatgatgaagatgatggtgatgatgatg 35140
>gb|L15318.1|HUMNUCPHOD Homo sapiens (clone NG5-4) processed pseudogene of nucleophosmin/B23 sequence Length = 1189 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 tgctgatgaagatgttggtgatga 251 |||||||||||||| ||||||||| Sbjct: 845 tgctgatgaagatgatggtgatga 868
>emb|AL672188.6| Mouse DNA sequence from clone RP23-53B2 on chromosome X, complete sequence Length = 150121 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 aactacaaagagtaatcaacacta 145 |||||||||||||||| ||||||| Sbjct: 54498 aactacaaagagtaattaacacta 54475 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,716,823 Number of Sequences: 3902068 Number of extensions: 3716823 Number of successful extensions: 74711 Number of sequences better than 10.0: 110 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74233 Number of HSP's gapped (non-prelim): 448 length of query: 474 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 452 effective length of database: 17,147,199,772 effective search space: 7750534296944 effective search space used: 7750534296944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
