ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd24i05 |
|---|---|
| Clone Library Name | barley_pub |
>PSBP_WHEAT (Q00434) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 258 Score = 181 bits (460), Expect = 6e-46 Identities = 92/94 (97%), Positives = 92/94 (97%) Frame = -2 Query: 461 YGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVA 282 YGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVA Sbjct: 166 YGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVA 225 Query: 281 DGKLYVCKAQAGDKRWFKGAKKFVENAAGSFSVA 180 DGKLYVCKAQ DKRWFKGAKKFVENAAGSFSVA Sbjct: 226 DGKLYVCKAQR-DKRWFKGAKKFVENAAGSFSVA 258
>PSBP_SPIOL (P12302) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 267 Score = 167 bits (423), Expect = 1e-41 Identities = 81/94 (86%), Positives = 86/94 (91%) Frame = -2 Query: 461 YGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVA 282 Y GKTDSEGGF+S VA+ANVLESS PVVDGKQYYSITVLTRTADGDEGGKHQ+I ATV Sbjct: 174 YFGKTDSEGGFDSGVVASANVLESSTPVVDGKQYYSITVLTRTADGDEGGKHQVIAATVK 233 Query: 281 DGKLYVCKAQAGDKRWFKGAKKFVENAAGSFSVA 180 DGKLY+CKAQAGDKRWFKGAKKFVE+A SFSVA Sbjct: 234 DGKLYICKAQAGDKRWFKGAKKFVESATSSFSVA 267
>PSBP_SOLTU (P93566) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 260 Score = 162 bits (411), Expect = 3e-40 Identities = 79/94 (84%), Positives = 86/94 (91%) Frame = -2 Query: 461 YGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVA 282 Y GKTDSEGGFES AVATAN+LE+S+ V GKQYY ++VLTRTADGDEGGKHQLITATV Sbjct: 167 YFGKTDSEGGFESGAVATANLLEASSATVGGKQYYYLSVLTRTADGDEGGKHQLITATVN 226 Query: 281 DGKLYVCKAQAGDKRWFKGAKKFVENAAGSFSVA 180 DGKLY+CKAQAGDKRWFKGAKKFVENAA SFS+A Sbjct: 227 DGKLYICKAQAGDKRWFKGAKKFVENAATSFSIA 260
>PSBP_PEA (P16059) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 259 Score = 162 bits (410), Expect = 4e-40 Identities = 76/92 (82%), Positives = 87/92 (94%) Frame = -2 Query: 455 GKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADG 276 G+TDSEGGF+++AVA AN+LESSAPV+ GKQYY+I+VLTRTADGDEGGKHQLITATV DG Sbjct: 168 GQTDSEGGFDTNAVAVANILESSAPVIGGKQYYNISVLTRTADGDEGGKHQLITATVKDG 227 Query: 275 KLYVCKAQAGDKRWFKGAKKFVENAAGSFSVA 180 KLY+CKAQAGDKRWFKGA+KFVE+ A SFSVA Sbjct: 228 KLYICKAQAGDKRWFKGARKFVEDTASSFSVA 259
>PSBP_LYCES (P29795) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 258 Score = 159 bits (403), Expect = 3e-39 Identities = 77/94 (81%), Positives = 85/94 (90%) Frame = -2 Query: 461 YGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVA 282 Y GKTDSEGGFES AVAT N+LE+S+ V GK+YY ++VLTRTADGDEGGKHQLITATV Sbjct: 165 YFGKTDSEGGFESGAVATRNLLEASSATVGGKEYYYLSVLTRTADGDEGGKHQLITATVN 224 Query: 281 DGKLYVCKAQAGDKRWFKGAKKFVENAAGSFSVA 180 DGKLY+CKAQAGDKRWFKGAKKFVENAA SFS+A Sbjct: 225 DGKLYICKAQAGDKRWFKGAKKFVENAATSFSIA 258
>PSBP3_TOBAC (Q04127) Oxygen-evolving enhancer protein 2-3, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 266 Score = 159 bits (402), Expect = 3e-39 Identities = 76/94 (80%), Positives = 84/94 (89%) Frame = -2 Query: 461 YGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVA 282 Y GKTDSEGGFESDAVA ANVLE+S V GKQYY +++LTRTADG+EGGKHQL+TATV Sbjct: 173 YSGKTDSEGGFESDAVAIANVLETSTAEVGGKQYYYLSILTRTADGNEGGKHQLVTATVN 232 Query: 281 DGKLYVCKAQAGDKRWFKGAKKFVENAAGSFSVA 180 DGKLY+CKAQAGDKRWFKGAKKFVEN A SFS+A Sbjct: 233 DGKLYICKAQAGDKRWFKGAKKFVENTATSFSLA 266
>PSBP2_TOBAC (P18212) Oxygen-evolving enhancer protein 2-2, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 265 Score = 158 bits (399), Expect = 7e-39 Identities = 77/94 (81%), Positives = 84/94 (89%) Frame = -2 Query: 461 YGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVA 282 Y GKTDSEGGFESDAVA ANVLE+S+ V GK YY ++VLTRTADG+EGGKHQLITATV Sbjct: 172 YSGKTDSEGGFESDAVAIANVLETSSAEVGGKPYYYLSVLTRTADGNEGGKHQLITATVN 231 Query: 281 DGKLYVCKAQAGDKRWFKGAKKFVENAAGSFSVA 180 DGKLY+CKAQAGDKRWFKGAKKFVEN A SFS+A Sbjct: 232 DGKLYICKAQAGDKRWFKGAKKFVENTATSFSLA 265
>PSBP_NARPS (Q40407) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 265 Score = 157 bits (397), Expect = 1e-38 Identities = 77/94 (81%), Positives = 83/94 (88%) Frame = -2 Query: 461 YGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVA 282 Y GKT SEGGFE +AV TAN+LE+S PVV GK YYSI VLTRTADGDEGGKH LITATV+ Sbjct: 172 YFGKTISEGGFEPNAVRTANILETSTPVVGGKDYYSIHVLTRTADGDEGGKHLLITATVS 231 Query: 281 DGKLYVCKAQAGDKRWFKGAKKFVENAAGSFSVA 180 DGKLY+CKAQAGDKRWFKGAKKFVE+AA SFS A Sbjct: 232 DGKLYICKAQAGDKRWFKGAKKFVESAASSFSAA 265
>PSBP1_TOBAC (Q7DM39) Oxygen-evolving enhancer protein 2-1, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 268 Score = 156 bits (395), Expect = 2e-38 Identities = 76/94 (80%), Positives = 85/94 (90%) Frame = -2 Query: 461 YGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVA 282 Y GKTDSEGGFES AVATAN+LE+S+ V GK+YY ++VLTRTADGDEGGKHQLI+ATV Sbjct: 175 YFGKTDSEGGFESGAVATANLLETSSSTVGGKEYYILSVLTRTADGDEGGKHQLISATVN 234 Query: 281 DGKLYVCKAQAGDKRWFKGAKKFVENAAGSFSVA 180 GKLY+CKAQAGDKRWFKGA+KFVENAA SFSVA Sbjct: 235 GGKLYICKAQAGDKRWFKGARKFVENAATSFSVA 268
>PSBP_CUCSA (Q9SLQ8) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (OEC23) Length = 263 Score = 155 bits (393), Expect = 4e-38 Identities = 75/94 (79%), Positives = 84/94 (89%) Frame = -2 Query: 461 YGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVA 282 Y GKT SEGGF+ DAVATAN+LE++A V+GK YY ++VLTRTADGDEGGKHQLITATV Sbjct: 170 YFGKTASEGGFDPDAVATANILEATASNVNGKDYYFVSVLTRTADGDEGGKHQLITATVN 229 Query: 281 DGKLYVCKAQAGDKRWFKGAKKFVENAAGSFSVA 180 DGKLY+CKAQAGDKRWFKGA+KFVE AA SFSVA Sbjct: 230 DGKLYICKAQAGDKRWFKGARKFVEGAASSFSVA 263
>PSBP_FRIAG (O49080) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 264 Score = 155 bits (392), Expect = 5e-38 Identities = 73/94 (77%), Positives = 83/94 (88%) Frame = -2 Query: 461 YGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVA 282 Y GKT SEGGF+ D+VATAN+LE S PVV GKQYY+I+VLTRTADGDEGGKH +I+ATV Sbjct: 171 YSGKTASEGGFDPDSVATANILEVSTPVVGGKQYYNISVLTRTADGDEGGKHHVISATVT 230 Query: 281 DGKLYVCKAQAGDKRWFKGAKKFVENAAGSFSVA 180 DGKLY+CKAQAGDKRWFKGAKKFVE+ SF+VA Sbjct: 231 DGKLYICKAQAGDKRWFKGAKKFVESTTTSFNVA 264
>PSBP2_ARATH (O49344) Oxygen-evolving enhancer protein 2-2, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 265 Score = 151 bits (381), Expect = 9e-37 Identities = 72/94 (76%), Positives = 84/94 (89%) Frame = -2 Query: 461 YGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVA 282 Y G+T SEGGF+++AVATAN+LE+S + GK+YY ++VLTRTADGDEGGKHQLITATV Sbjct: 172 YVGETASEGGFDANAVATANILETSTQEIGGKEYYYLSVLTRTADGDEGGKHQLITATVN 231 Query: 281 DGKLYVCKAQAGDKRWFKGAKKFVENAAGSFSVA 180 GKLY+CKAQAGDKRWFKGA+KFVENAA SFSVA Sbjct: 232 GGKLYICKAQAGDKRWFKGARKFVENAATSFSVA 265
>PSBP1_ARATH (Q42029) Oxygen-evolving enhancer protein 2-1, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 263 Score = 150 bits (378), Expect = 2e-36 Identities = 73/94 (77%), Positives = 84/94 (89%) Frame = -2 Query: 461 YGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVA 282 Y G+T SEGGF+++AVATAN+LESS+ V GK YY ++VLTRTADGDEGGKHQLITATV Sbjct: 170 YFGETASEGGFDNNAVATANILESSSQEVGGKPYYYLSVLTRTADGDEGGKHQLITATVN 229 Query: 281 DGKLYVCKAQAGDKRWFKGAKKFVENAAGSFSVA 180 GKLY+CKAQAGDKRWFKGA+KFVE+AA SFSVA Sbjct: 230 GGKLYICKAQAGDKRWFKGARKFVESAATSFSVA 263
>PSBP_SINAL (P11594) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 260 Score = 145 bits (366), Expect = 5e-35 Identities = 71/94 (75%), Positives = 81/94 (86%) Frame = -2 Query: 461 YGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVA 282 Y G+T SEGGF+++AVATAN+LE++ V GK YY ++VLTRTADGDEGGKHQLITATV Sbjct: 167 YFGETASEGGFDNNAVATANILETNIQDVGGKPYYYLSVLTRTADGDEGGKHQLITATVN 226 Query: 281 DGKLYVCKAQAGDKRWFKGAKKFVENAAGSFSVA 180 GKLY+CKAQAGDKRWFKGA KFVE AA SFSVA Sbjct: 227 GGKLYICKAQAGDKRWFKGANKFVEKAATSFSVA 260
>PSBP_BRAJU (Q96334) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (Fragment) Length = 217 Score = 140 bits (353), Expect = 2e-33 Identities = 69/94 (73%), Positives = 79/94 (84%) Frame = -2 Query: 461 YGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVA 282 Y G+T EGGF+++AVATAN+LE++ V GK YY ++VLTRTAD DEGGKHQLITATV Sbjct: 124 YFGETACEGGFDNNAVATANILETNIQDVGGKPYYYLSVLTRTADEDEGGKHQLITATVN 183 Query: 281 DGKLYVCKAQAGDKRWFKGAKKFVENAAGSFSVA 180 GKLY+CKAQAGDKRWFKGA KFVE AA SFSVA Sbjct: 184 GGKLYICKAQAGDKRWFKGANKFVEKAATSFSVA 217
>PSBP_CHLRE (P11471) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) Length = 245 Score = 100 bits (249), Expect = 2e-21 Identities = 53/95 (55%), Positives = 65/95 (68%), Gaps = 2/95 (2%) Frame = -2 Query: 461 YGGKTDSEGGFESDAVATANVLESSAPV-VDGKQYYSITVLTRTADGDEGGKHQLITATV 285 Y G+T SEGGF + V+ A++L+ S GK YY +L R+ADGDEGG+HQLI ATV Sbjct: 150 YSGETQSEGGFAPNRVSAASLLDVSTTTDKKGKTYYKYELLVRSADGDEGGRHQLIGATV 209 Query: 284 -ADGKLYVCKAQAGDKRWFKGAKKFVENAAGSFSV 183 +D KLY+ K Q GDKRWFKGAKK A SF+V Sbjct: 210 GSDNKLYIIKIQIGDKRWFKGAKKEAMGAFDSFTV 244
>MTP_PIG (Q865F1) Microsomal triglyceride transfer protein large subunit| precursor Length = 894 Score = 31.6 bits (70), Expect = 1.0 Identities = 18/45 (40%), Positives = 25/45 (55%) Frame = -2 Query: 353 ITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 219 + +L R+ DGD+ QLI T+ D K+ Q G+K FKG K Sbjct: 65 VVLLWRSPDGDDD---QLIQITIKDVKVENVNQQRGEKSIFKGKK 106
>MTP_BOVIN (P55156) Microsomal triglyceride transfer protein large subunit| precursor (Fragment) Length = 887 Score = 30.8 bits (68), Expect = 1.8 Identities = 18/45 (40%), Positives = 25/45 (55%) Frame = -2 Query: 353 ITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 219 + +L R+ DGD+ +QLI T+ D L Q G+K FKG K Sbjct: 58 VALLWRSPDGDD---NQLIQITMKDVNLENVNQQRGEKSIFKGKK 99
>NUOG_PSEFL (Q9KGW3) NADH-quinone oxidoreductase chain 3 (EC 1.6.99.5) (NADH| dehydrogenase I, chain G) (NDH-1, chain G) Length = 904 Score = 30.8 bits (68), Expect = 1.8 Identities = 21/66 (31%), Positives = 31/66 (46%) Frame = -2 Query: 413 ATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRW 234 A A+ L++SAP VDG + + R AD K LI A + G + +A A + Sbjct: 456 AVAHALDASAPAVDGLDSEAAALAQRIADALLAAKRPLIIAGTSLGSKALIEAAANIAKA 515 Query: 233 FKGAKK 216 K +K Sbjct: 516 LKLREK 521
>NLAL1_ARATH (Q8VZT0) Putative H/ACA ribonucleoprotein complex subunit 1-like| protein 1 Length = 202 Score = 30.8 bits (68), Expect = 1.8 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +3 Query: 99 HACPGSVSTRCFPEEIP-LNSPIGHVYLCDTEGSCGVLDELLGALEPPLVSGLRLADVEL 275 HAC G T+ E+IP N+PI YL + + G +DE+ G + L S +++ + + Sbjct: 66 HACEGDAVTKLSQEKIPHFNAPI---YL-ENKTQIGKVDEIFGPINESLFS-IKMMEGIV 120 Query: 276 AVGDGGGDELVL 311 A GD+ + Sbjct: 121 ATSYSPGDKFFI 132
>TL30_ARATH (O49292) Thylakoid lumenal 29.8 kDa protein, chloroplast precursor| Length = 274 Score = 29.6 bits (65), Expect = 3.9 Identities = 22/73 (30%), Positives = 31/73 (42%) Frame = -2 Query: 401 VLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGA 222 VL S+ DG+ YY + H LITAT A +LY+ +W K Sbjct: 211 VLSSNVAEHDGRLYYQFELEP---------PHVLITATAAGNRLYLFSVTGNGLQW-KRH 260 Query: 221 KKFVENAAGSFSV 183 K ++ A SF + Sbjct: 261 YKDLKRIASSFRI 273
>TER_EUGGR (Q5EU90) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.44) Length = 539 Score = 29.6 bits (65), Expect = 3.9 Identities = 17/42 (40%), Positives = 24/42 (57%) Frame = +1 Query: 316 PSSPSAVLVSTVML*YCLPSTTGAELSSTLAVATASDSKPPS 441 P+SPSA +VS L C+ + A S+ A++TAS P S Sbjct: 4 PASPSAAVVSAGALCLCVATVLLATGSNPTALSTASTRSPTS 45
>PHSL_DESBA (P13065) Periplasmic [NiFeSe] hydrogenase large subunit (EC| 1.12.99.6) (NiFeSe hydrogenlyase large chain) Length = 513 Score = 28.9 bits (63), Expect = 6.7 Identities = 21/56 (37%), Positives = 26/56 (46%) Frame = -2 Query: 395 ESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFK 228 +++ P DGK SI LTR EG H I V DGK+ K G R F+ Sbjct: 2 QAATPAADGKVKISIDPLTRV----EG--HLKIEVEVKDGKVVDAKCSGGMFRGFE 51
>NUOG_ECOLI (P33602) NADH-quinone oxidoreductase chain G (EC 1.6.99.5) (NADH| dehydrogenase I, chain G) (NDH-1, chain G) (NUO7) Length = 907 Score = 28.5 bits (62), Expect = 8.7 Identities = 20/63 (31%), Positives = 29/63 (46%) Frame = -2 Query: 413 ATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRW 234 A A+ L++SAP VDG + + + G K LI + G L V +A A + Sbjct: 459 AIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLEVIQAAANVAKA 518 Query: 233 FKG 225 KG Sbjct: 519 LKG 521
>NUOG_ECO57 (Q8XCX2) NADH-quinone oxidoreductase chain 3 (EC 1.6.99.5) (NADH| dehydrogenase I, chain G) (NDH-1, chain G) Length = 907 Score = 28.5 bits (62), Expect = 8.7 Identities = 20/63 (31%), Positives = 29/63 (46%) Frame = -2 Query: 413 ATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRW 234 A A+ L++SAP VDG + + + G K LI + G L V +A A + Sbjct: 459 AIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLEVIQAAANVAKA 518 Query: 233 FKG 225 KG Sbjct: 519 LKG 521
>Y5100_ANASP (Q8YM40) Hypothetical UPF0192 protein all5100 precursor| Length = 1906 Score = 28.5 bits (62), Expect = 8.7 Identities = 25/101 (24%), Positives = 38/101 (37%), Gaps = 17/101 (16%) Frame = -2 Query: 455 GKTDSEGGFESDAVATANVLESSAPVVDGKQYYSIT------VLTRTAD----------- 327 GKTD G F + A S + + I TRT + Sbjct: 560 GKTDENGTFRVNREALQQCTAGSQNSIKSPELLVIASEKEDWAFTRTEEYSGVYGYGIDA 619 Query: 326 GDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAKKFVEN 204 G +G K + +D +LY Q+G+K WF G +++N Sbjct: 620 GWQGNKPESRGVIFSDRQLY----QSGEKAWFTGFADYLQN 656 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,921,257 Number of Sequences: 219361 Number of extensions: 1118676 Number of successful extensions: 3166 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 3063 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3159 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
