>ref|NM_186999.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1689

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 67/79 (84%), Gaps = 3/79 (3%)
 Strand = Plus / Minus

                                                                        
Query: 178  agaagaaggctcggcttccgtagaacaccttgggagatttctcctgcgcacccccggccg 237
            ||||||| || |||||||||||||| || ||||||||||||||| ||   || |||||| 
Sbjct: 1488 agaagaaagcacggcttccgtagaatactttgggagatttctccggc---ccaccggcca 1432

                               
Query: 238  tcngtttcttcgccgccgc 256
            || | ||||||||||||||
Sbjct: 1431 tcggcttcttcgccgccgc 1413

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 67/79 (84%), Gaps = 3/79 (3%)
 Strand = Plus / Minus

                                                                            
Query: 178      agaagaaggctcggcttccgtagaacaccttgggagatttctcctgcgcacccccggccg 237
                ||||||| || |||||||||||||| || ||||||||||||||| ||   || |||||| 
Sbjct: 23694884 agaagaaagcacggcttccgtagaatactttgggagatttctccggc---ccaccggcca 23694828

                                   
Query: 238      tcngtttcttcgccgccgc 256
                || | ||||||||||||||
Sbjct: 23694827 tcggcttcttcgccgccgc 23694809

>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1060_D03
          Length = 102178

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 67/79 (84%), Gaps = 3/79 (3%)
 Strand = Plus / Minus

                                                                         
Query: 178   agaagaaggctcggcttccgtagaacaccttgggagatttctcctgcgcacccccggccg 237
             ||||||| || |||||||||||||| || ||||||||||||||| ||   || |||||| 
Sbjct: 39498 agaagaaagcacggcttccgtagaatactttgggagatttctccggc---ccaccggcca 39442

                                
Query: 238   tcngtttcttcgccgccgc 256
             || | ||||||||||||||
Sbjct: 39441 tcggcttcttcgccgccgc 39423

>dbj|AK071269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088L08, full
            insert sequence
          Length = 1690

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 67/79 (84%), Gaps = 3/79 (3%)
 Strand = Plus / Minus

                                                                        
Query: 178  agaagaaggctcggcttccgtagaacaccttgggagatttctcctgcgcacccccggccg 237
            ||||||| || |||||||||||||| || ||||||||||||||| ||   || |||||| 
Sbjct: 1489 agaagaaagcacggcttccgtagaatactttgggagatttctccggc---ccaccggcca 1433

                               
Query: 238  tcngtttcttcgccgccgc 256
            || | ||||||||||||||
Sbjct: 1432 tcggcttcttcgccgccgc 1414

>gb|AY104945.1| Zea mays PCO113923 mRNA sequence
          Length = 1032

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 178 agaagaaggctcggcttccgtagaacaccttgggaga 214
           ||||||| || ||||| ||||||||||||||||||||
Sbjct: 728 agaagaacgcccggctgccgtagaacaccttgggaga 692

>ref|NM_189780.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1191

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 178  agaagaaggctcggcttccgtagaacacc 206
            ||||||| |||| ||||||||||||||||
Sbjct: 1189 agaagaaagctctgcttccgtagaacacc 1161

>gb|AY596584.1| Saccharum officinarum clone SCCCRZ1003F10, complete sequence
          Length = 2010

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 178 agaagaaggctcggcttccgtagaacaccttgggaga 214
           ||||||| || ||||| || |||||||||||||||||
Sbjct: 313 agaagaacgcccggctgccatagaacaccttgggaga 349

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 178      agaagaaggctcggcttccgtagaacacc 206
                ||||||| |||| ||||||||||||||||
Sbjct: 41993661 agaagaaagctctgcttccgtagaacacc 41993689

>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431G06
          Length = 140466

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 178   agaagaaggctcggcttccgtagaacacc 206
             ||||||| |||| ||||||||||||||||
Sbjct: 95738 agaagaaagctctgcttccgtagaacacc 95766

>dbj|AK058479.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C08, full
            insert sequence
          Length = 1686

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 178  agaagaaggctcggcttccgtagaacacc 206
            ||||||| |||| ||||||||||||||||
Sbjct: 1285 agaagaaagctctgcttccgtagaacacc 1257

>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 55     acgaagcctaaataaaacaac 75
              |||||||||||||||||||||
Sbjct: 736398 acgaagcctaaataaaacaac 736378

>ref|NM_129360.2| Arabidopsis thaliana CAC3; acetyl-CoA carboxylase AT2G38040 (CAC3)
            transcript variant AT2G38040.1 mRNA, complete cds
          Length = 2937

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 182  gaaggctcggcttccgtaga 201
            ||||||||||||||||||||
Sbjct: 1667 gaaggctcggcttccgtaga 1648

>ref|NM_179960.1| Arabidopsis thaliana CAC3; acetyl-CoA carboxylase AT2G38040 (CAC3)
            transcript variant AT2G38040.2 mRNA, complete cds
          Length = 2945

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 182  gaaggctcggcttccgtaga 201
            ||||||||||||||||||||
Sbjct: 1667 gaaggctcggcttccgtaga 1648

>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete
              sequence
          Length = 1194300

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 63     taaataaaacaacagcatgagaaa 86
              ||||||| ||||||||||||||||
Sbjct: 108745 taaataatacaacagcatgagaaa 108768

>gb|AF056970.1| Arabidopsis thaliana carboxyltransferase alpha subunit (CAC3) gene,
            nuclear gene encoding chloroplast protein, complete cds
          Length = 6280

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 182  gaaggctcggcttccgtaga 201
            ||||||||||||||||||||
Sbjct: 4577 gaaggctcggcttccgtaga 4558

>gb|AF056969.1| Arabidopsis thaliana carboxyltransferase alpha subunit (CAC3) mRNA,
            nuclear gene encoding chloroplast protein, complete cds
          Length = 2852

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 182  gaaggctcggcttccgtaga 201
            ||||||||||||||||||||
Sbjct: 1623 gaaggctcggcttccgtaga 1604

>gb|AC125173.3| Mus musculus BAC clone RP24-492I6 from chromosome 19, complete sequence
          Length = 149795

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 57    gaagcctaaataaaacaacagcat 80
             ||||||||| ||||||||||||||
Sbjct: 26231 gaagcctaattaaaacaacagcat 26254

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 175     cttagaagaaggctcggcttccgtagaa 202
               ||||||||||||||| |||||| |||||
Sbjct: 4863004 cttagaagaaggctctgcttccatagaa 4863031

>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16,
              complete sequence
          Length = 159092

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 175    cttagaagaaggctcggcttccgtagaa 202
              ||||||||||||||| |||||| |||||
Sbjct: 132543 cttagaagaaggctctgcttccatagaa 132516

>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome
          Length = 2839318

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 179     gaagaaggctcggcttccgt 198
               ||||||||||||||||||||
Sbjct: 1826359 gaagaaggctcggcttccgt 1826340

>dbj|AK221200.1| Arabidopsis thaliana mRNA for carboxyltransferase alpha subunit,
            complete cds, clone: RAFL23-06-A22
          Length = 2943

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 182  gaaggctcggcttccgtaga 201
            ||||||||||||||||||||
Sbjct: 1692 gaaggctcggcttccgtaga 1673

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 175     cttagaagaaggctcggcttccgtagaa 202
               ||||||||||||||| |||||| |||||
Sbjct: 4862219 cttagaagaaggctctgcttccatagaa 4862246

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 247     tcgccgccgcgctcgagtcg 266
               ||||||||||||||||||||
Sbjct: 3393525 tcgccgccgcgctcgagtcg 3393544

>gb|AC007661.2|AC007661 Arabidopsis thaliana chromosome II section 205 of 255 of the complete
             sequence. Sequence from clones F13M22, T8P21, F16M14
          Length = 95612

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   gaaggctcggcttccgtaga 201
             ||||||||||||||||||||
Sbjct: 82953 gaaggctcggcttccgtaga 82934

>emb|AL954187.5| Zebrafish DNA sequence from clone CH211-69P5 in linkage group 15,
              complete sequence
          Length = 185137

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    tcagctgagactgatgactg 135
              ||||||||||||||||||||
Sbjct: 101422 tcagctgagactgatgactg 101441

>dbj|AK073045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033007C02, full
            insert sequence
          Length = 1557

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 175  cttagaagaaggctcggcttccgtagaa 202
            ||||||||||||||| |||||| |||||
Sbjct: 1373 cttagaagaaggctctgcttccatagaa 1346

>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence
          Length = 412348

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 247    tcgccgccgcgctcgagtcggtgc 270
              |||||||||||| |||||||||||
Sbjct: 164960 tcgccgccgcgcccgagtcggtgc 164983


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,389,638
Number of Sequences: 3902068
Number of extensions: 2389638
Number of successful extensions: 43742
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43454
Number of HSP's gapped (non-prelim): 284
length of query: 281
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 259
effective length of database: 17,147,199,772
effective search space: 4441124740948
effective search space used: 4441124740948
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)