>RIMB2_MOUSE (Q80U40) RIM-binding protein 2 (RIM-BP2)|
          Length = 1072

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
 Frame = -3

Query: 379 QTSNSPGNDEGNQILPEGMHAVGRG-TSPSWENVVQSDLGLPASSTYQFGAQYQQSSEYQ 203
           + S SPG   G+ + P  MH+ G G  SPS   ++    G P S+T       + +    
Sbjct: 638 EQSRSPGPAHGHMLEPPDMHSAGPGRRSPSPSRILPQPQGAPVSTTVAKAMAREAAQRVA 697

Query: 202 PPGGLDSSNLQLQISASKRFLLVSED 125
               L+  +L L+ S+  ++    E+
Sbjct: 698 ESNRLEKRSLFLEQSSVGQYTNSDEE 723

>HIS82_PSEAE (Q9HZ68) Histidinol-phosphate aminotransferase 2 (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase 2)
          Length = 369

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 22/65 (33%), Positives = 26/65 (40%)
 Frame = -3

Query: 433 VPSLDFATNTEAADVQGNQTSNSPGNDEGNQILPEGMHAVGRGTSPSWENVVQSDLGLPA 254
           V SL  A    A D       +   ND G   L +G HA+G    PS  N +  DL   A
Sbjct: 260 VNSLALAAACAALDDHDYLAQSRRLNDSGMAQLEDGFHALGLSWIPSKGNFIAVDLARDA 319

Query: 253 SSTYQ 239
              YQ
Sbjct: 320 GPVYQ 324

>RIMB2_RAT (Q9JIR1) RIM-binding protein 2 (RIM-BP2)|
          Length = 1049

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = -3

Query: 379 QTSNSPGNDEGNQILPEGMHAVGRG-TSPSWENVVQSDLGLPASSTYQFGAQYQQSSEYQ 203
           + S  PG   G+ + P  MH+ G G  SPS   ++    G P S+T       + +    
Sbjct: 619 EQSRPPGPAHGHMLEPPDMHSTGPGRRSPSPSRILPQPQGAPVSTTVAKAMAREAAQRVA 678

Query: 202 PPGGLDSSNLQLQISAS 152
               L+  +L L+ S++
Sbjct: 679 ETSKLEKRSLFLEQSSA 695

>LRCH4_MOUSE (Q921G6) Leucine-rich repeats and calponin homology|
           domain-containing protein 4
          Length = 680

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = -3

Query: 379 QTSNSPGNDEGNQILPEGMHAVGRGTS-PSWENVVQSDLGLPASSTYQFGAQYQQSSEYQ 203
           Q S   G+   + +L  G+ A G G S PS +       G P SST Q G    Q +   
Sbjct: 420 QQSGGWGSPRKDSVLKRGIRAAGAGASAPSTQATCN---GPPKSSTTQLGVSGGQGAPTP 476

Query: 202 PPGGLD 185
           PP   D
Sbjct: 477 PPTSQD 482

>PHOG_EMENI (Q05534) Probable phosphate-non-repressible acid phosphatase|
           precursor (EC 3.1.3.2)
          Length = 330

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 13/124 (10%)
 Frame = -3

Query: 409 NTEAADVQGNQTSNSPG-NDEGNQIL----PE-GMHAVGRGTSPSWENVVQSDLGLPASS 248
           N +AA    N T  SP   D+   ++    PE   + V + + P+W     S L  P ++
Sbjct: 209 NAQAAAASNNLTRTSPSLTDKAKTVVKSSSPETSSNRVPQQSPPNWALATNSTLPPPTTT 268

Query: 247 TYQFGAQYQQSS-EYQPPGGLDSSNLQLQ-ISASKRFLLVSEDCV-----DSPSYDFIPR 89
           T    + Y QSS E+  P  +++  L    I+A     L+ +D +     DS S+     
Sbjct: 269 TLPHSSVYSQSSPEFSRP--VEAHRLTTSAIAAPINLSLLDDDSLNLSNCDSRSHTSFSN 326

Query: 88  DEVV 77
           D VV
Sbjct: 327 DLVV 330

>MED16_YEAST (P32259) RNA polymerase II mediator complex subunit 16 (Global|
           transcriptional regulator SIN4) (YGP1 expression
           regulatory protein 1) (Transcriptional silencing factor
           3) (SWI4 suppressor protein 5) (SNF1 suppressor protein
           4)
          Length = 974

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 10/132 (7%)
 Frame = -3

Query: 376 TSNSPGNDEGNQILPEGMHAVGRGT---SPSWENVV---QSDLGLPASSTYQFGAQYQQS 215
           T+  P +DEG+ +  E +H V + +    PS E +V     D        Y+  A  Q S
Sbjct: 339 TTLDPTDDEGHVLKLENLHVVSKSSIEKDPSPEILVLYNVCDTSKSLVKRYRL-APTQLS 397

Query: 214 SEY----QPPGGLDSSNLQLQISASKRFLLVSEDCVDSPSYDFIPRDEVVNGINTLSAHD 47
           +EY    +P   +D +N   QI  S+R+ L     +       +   E+ +   +    D
Sbjct: 398 AEYLVILKPDLNIDRNNSTNQIFQSRRYNLRRHSDIVLDKKVTLITSEMFDAFVSFYFED 457

Query: 46  SSLQSCLXPDWQ 11
            +++S    DW+
Sbjct: 458 GTIESYNQNDWK 469


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,023,972
Number of Sequences: 219361
Number of extensions: 1881224
Number of successful extensions: 4687
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4682
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)