ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104575.1| Zea mays PCO138774 mRNA sequence 389 e-105
2ref|NM_187347.2| Oryza sativa (japonica cultivar-group), mRNA 387 e-104
3dbj|AK070990.1| Oryza sativa (japonica cultivar-group) cDNA clon... 387 e-104
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 325 8e-86
5dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic D... 325 8e-86
6dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic D... 325 8e-86
7gb|AC124966.33| Medicago truncatula clone mth2-8i15, complete se... 76 1e-10
8ref|NM_187349.1| Oryza sativa (japonica cultivar-group), mRNA 70 7e-09
9dbj|D10660.1|IPBF1ATP Sweet potato mitochondrial F1-ATPase delta... 64 4e-07
10gb|BT014114.1| Lycopersicon esculentum clone 133218F, mRNA sequence 60 7e-06
11gb|BT018156.1| Zea mays clone EL01N0556B05.c mRNA sequence 52 0.002
12gb|L13320.1|PEAATPASE Pisum sativum F1-ATPase delta-prime subuni... 44 0.41
13ref|XM_520988.1| PREDICTED: Pan troglodytes similar to radixin (... 42 1.6
14ref|XM_522176.1| PREDICTED: Pan troglodytes similar to radixin (... 42 1.6
15ref|NM_204751.1| Gallus gallus radixin (RDX), mRNA 42 1.6
16ref|NM_002906.3| Homo sapiens radixin (RDX), mRNA 42 1.6
17emb|AJ249838.1|GGA249838 Gallus gallus mRNA for radixin (rdx gene) 42 1.6
18ref|XM_857605.1| PREDICTED: Canis familiaris similar to radixin,... 42 1.6
19ref|XM_536581.2| PREDICTED: Canis familiaris similar to radixin,... 42 1.6
20gb|BC047109.1| Homo sapiens radixin, mRNA (cDNA clone MGC:48283 ... 42 1.6
21emb|AL137751.1|HSM802383 Homo sapiens mRNA; cDNA DKFZp434I0812 (... 42 1.6
22gb|M86444.1|PIGMOESB Sus scrofa moesin B mRNA, complete cds 42 1.6
23ref|NM_001009576.1| Sus scrofa moesin B (RDX), mRNA 42 1.6
24gb|AC006210.4| Homo sapiens X BAC GS1-309P15 (Genome Systems Hum... 42 1.6
25emb|BX648536.1|HSM808684 Homo sapiens mRNA; cDNA DKFZp779D2226 (... 42 1.6
26emb|CT573324.3| CH251-10E6, complete sequence 42 1.6
27dbj|AP000901.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.6
28gb|L02320.1|HUMRADIXIN Human radixin mRNA, complete cds 42 1.6
29dbj|AB021794.1| Pyrus pyrifolia PPFRU36 mRNA for F1-ATPase, part... 42 1.6
30gb|AE006312.1| Lactococcus lactis subsp. lactis IL1403 section 7... 40 6.4
31emb|CR377226.19| Zebrafish DNA sequence from clone DKEY-120I4 in... 40 6.4
32emb|CR711892.2|CNS0GC8W Tetraodon nigroviridis full-length cDNA 40 6.4
33emb|CR717757.2|CNS0GGRN Tetraodon nigroviridis full-length cDNA 40 6.4
34emb|CR704896.2|CNS0G6UK Tetraodon nigroviridis full-length cDNA 40 6.4
35emb|CR678047.2|CNS0FM52 Tetraodon nigroviridis full-length cDNA 40 6.4
36emb|CR677999.2|CNS0FM3R Tetraodon nigroviridis full-length cDNA 40 6.4
37emb|CR671359.2|CNS0FGZP Tetraodon nigroviridis full-length cDNA 40 6.4
38emb|CR670662.2|CNS0FGGC Tetraodon nigroviridis full-length cDNA 40 6.4
39emb|CR665129.2|CNS0FC6N Tetraodon nigroviridis full-length cDNA 40 6.4
40emb|CR661561.2|CNS0F9FJ Tetraodon nigroviridis full-length cDNA 40 6.4
41emb|CR658320.2|CNS0F6XI Tetraodon nigroviridis full-length cDNA 40 6.4
42emb|CR655014.2|CNS0F4DO Tetraodon nigroviridis full-length cDNA 40 6.4
43emb|CR639459.2|CNS0ESDL Tetraodon nigroviridis full-length cDNA 40 6.4
44emb|CR638072.2|CNS0ERB2 Tetraodon nigroviridis full-length cDNA 40 6.4
45emb|CR632495.2|CNS0EN05 Tetraodon nigroviridis full-length cDNA 40 6.4
46emb|CR631144.2|CNS0ELYL Tetraodon nigroviridis full-length cDNA 40 6.4
47emb|CR632369.2|CNS0EMWN Tetraodon nigroviridis full-length cDNA 40 6.4
48emb|CR632349.2|CNS0EMW3 Tetraodon nigroviridis full-length cDNA 40 6.4
49emb|CR632195.2|CNS0EMRT Tetraodon nigroviridis full-length cDNA 40 6.4
50emb|CR631831.2|CNS0EMHP Tetraodon nigroviridis full-length cDNA 40 6.4
51emb|BX248419.4| Human DNA sequence from clone DASS-254G14 on chr... 40 6.4
52emb|AL844220.3| Human DNA sequence from clone DAQB-44E15 on chro... 40 6.4
53emb|AL662832.5| Human DNA sequence from clone XXbac-141O14 on ch... 40 6.4
54emb|AL662782.3| Human DNA sequence from clone XXbac-252N6 on chr... 40 6.4
55emb|AL080284.20|HSJ177I10 Human DNA sequence from clone RP1-177I... 40 6.4
56emb|AL023287.1|SPBC23E6 S.pombe chromosome II cosmid c23E6 40 6.4
57emb|AJ536587.1|MGL536587 Marthasterias glacialis partial mRNA fo... 40 6.4
58emb|CR388382.5| Human DNA sequence from clone DADB-23P23 on chro... 40 6.4
59emb|AL672026.11| Mouse DNA sequence from clone RP23-403O11 on ch... 40 6.4
60gb|AC073565.5| Mus musculus strain C57BL/6J chromosome 12 clone ... 40 6.4
61ref|NM_001022530.1| Schizosaccharomyces pombe 972h- hypothetical... 40 6.4
62dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
63dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
64emb|BX927189.6| Human DNA sequence from clone DAMA-83L10 on chro... 40 6.4
65gb|AC158314.5| Mus musculus chromosome 7, clone RP23-145E21, com... 40 6.4
66gb|AC079181.3|AC079181 Mus musculus strain C57BL/6J chromosome 1... 40 6.4
67dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
68dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA... 40 6.4
69dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
70dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
71dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility co... 40 6.4
72tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy ... 40 6.4
73gb|AF042275.1|AF042275 Oryza sativa anther-specific protein gene... 40 6.4
74emb|AL162511.5|CNS01RHV Human chromosome 14 DNA sequence BAC R-2... 40 6.4
75gb|AC004191.1|AC004191 Homo sapiens clone UWGC:y18c296 from 6p21... 40 6.4
76dbj|AB023053.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA... 40 6.4 
>gb|AY104575.1| Zea mays PCO138774 mRNA sequence
          Length = 1041

 Score =  389 bits (196), Expect = e-105
 Identities = 337/384 (87%)
 Strand = Plus / Minus

                                                                       
Query: 93  aaccagtcaatgcagcattgagcgcactgtgaacatccactccgatctgagcttccgcct 152
           |||| |||||||||||||||||||||||||||||||| || ||||||||||| || ||||
Sbjct: 719 aaccggtcaatgcagcattgagcgcactgtgaacatcgacaccgatctgagcctcagcct 660

                                                                       
Query: 153 tctttaggtcagtcgaggctgatccaagcttggcagtgaattcagcaagacctttctgga 212
           |||  |||||||| ||||| || ||||||||||||||||||||||| ||||| ||||| |
Sbjct: 659 tctccaggtcagtagaggccgaaccaagcttggcagtgaattcagcgagacccttctgaa 600

                                                                       
Query: 213 ccaagctttggtcaatctgatcaagggggacagcctcaacagccacaacatcagtaatgg 272
           | ||   | |||| |||||||| |  |||||||||||||||||||||| ||||| |||||
Sbjct: 599 caaaagctgggtcgatctgatccacagggacagcctcaacagccacaatatcagcaatgg 540

                                                                       
Query: 273 agtttgcatggatgaatgcaaagccactgctcacaaagtactttgtaacatcatttccct 332
           |||||||||||| ||| ||||| |||||||||||||||||||| || ||||| || ||||
Sbjct: 539 agtttgcatggacgaaagcaaatccactgctcacaaagtacttggtcacatcgttcccct 480

                                                                       
Query: 333 cgtgtacagacataacaccaggcttgagctctgcaattgtggaaacatggcctggcaaaa 392
           | ||||| || | |||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 479 catgtactgagagaacaccaggcttgagctctgcaatcgtggcaacatggcctggcaaaa 420

                                                                       
Query: 393 tacccatcaggccagttgtagccggtaccattaccatatcaacctccttattggtgatct 452
             |||||| | ||||||||||| ||||| |||||||| || |||||||| |||| |||||
Sbjct: 419 cgcccatctgaccagttgtagctggtacaattaccatgtccacctccttgttggcgatct 360

                                   
Query: 453 cggacttgtaggggaggacgaagt 476
           ||||||||||||||||||||||||
Sbjct: 359 cggacttgtaggggaggacgaagt 336
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>ref|NM_187347.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 935

 Score =  387 bits (195), Expect = e-104
 Identities = 339/387 (87%)
 Strand = Plus / Minus

                                                                       
Query: 90  atcaaccagtcaatgcagcattgagcgcactgtgaacatccactccgatctgagcttccg 149
           ||||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 705 atcaaccagccaaagcggcattgagcgcactgtgaacatccactccaatctgagcttcgg 646

                                                                       
Query: 150 ccttctttaggtcagtcgaggctgatccaagcttggcagtgaattcagcaagacctttct 209
           ||||||  || ||||| ||||| ||||||||||||||  ||||||| || ||||| | ||
Sbjct: 645 ccttctccagttcagttgaggccgatccaagcttggcgttgaattccgcgagaccctgct 586

                                                                       
Query: 210 ggaccaagctttggtcaatctgatcaagggggacagcctcaacagccacaacatcagtaa 269
           |||||  |  | |||| ||||| || ||||||||||||||||||||||| | |||||  |
Sbjct: 585 ggaccgcggctgggtcgatctggtccagggggacagcctcaacagccacgatatcagcga 526

                                                                       
Query: 270 tggagtttgcatggatgaatgcaaagccactgctcacaaagtactttgtaacatcatttc 329
           |||||||||||||||  ||||||||||||||||||||||||||||| || | ||| ||||
Sbjct: 525 tggagtttgcatggacaaatgcaaagccactgctcacaaagtacttggtgatatcgtttc 466

                                                                       
Query: 330 cctcgtgtacagacataacaccaggcttgagctctgcaattgtggaaacatggcctggca 389
           |||||||||| || | ||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 465 cctcgtgtaccgagagaacaccaggcttgagctctgcgattgtggaaacgtggcctggca 406

                                                                       
Query: 390 aaatacccatcaggccagttgtagccggtaccattaccatatcaacctccttattggtga 449
           ||| ||||||| | |||||||| || ||||| |||||||| ||||||||||| |||| ||
Sbjct: 405 aaacacccatctgaccagttgttgctggtacaattaccatgtcaacctccttgttggcga 346

                                      
Query: 450 tctcggacttgtaggggaggacgaagt 476
           |||||||||||||||||||||||||||
Sbjct: 345 tctcggacttgtaggggaggacgaagt 319



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 19  tgagtttgcaggcttcaactcacattctaaagatgtagatg 59
           ||||||||||  ||||| ||||||||||||| ||| |||||
Sbjct: 784 tgagtttgcaaacttcagctcacattctaaaaatgaagatg 744
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>dbj|AK070990.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078O13, full
           insert sequence
          Length = 935

 Score =  387 bits (195), Expect = e-104
 Identities = 339/387 (87%)
 Strand = Plus / Minus

                                                                       
Query: 90  atcaaccagtcaatgcagcattgagcgcactgtgaacatccactccgatctgagcttccg 149
           ||||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 705 atcaaccagccaaagcggcattgagcgcactgtgaacatccactccaatctgagcttcgg 646

                                                                       
Query: 150 ccttctttaggtcagtcgaggctgatccaagcttggcagtgaattcagcaagacctttct 209
           ||||||  || ||||| ||||| ||||||||||||||  ||||||| || ||||| | ||
Sbjct: 645 ccttctccagttcagttgaggccgatccaagcttggcgttgaattccgcgagaccctgct 586

                                                                       
Query: 210 ggaccaagctttggtcaatctgatcaagggggacagcctcaacagccacaacatcagtaa 269
           |||||  |  | |||| ||||| || ||||||||||||||||||||||| | |||||  |
Sbjct: 585 ggaccgcggctgggtcgatctggtccagggggacagcctcaacagccacgatatcagcga 526

                                                                       
Query: 270 tggagtttgcatggatgaatgcaaagccactgctcacaaagtactttgtaacatcatttc 329
           |||||||||||||||  ||||||||||||||||||||||||||||| || | ||| ||||
Sbjct: 525 tggagtttgcatggacaaatgcaaagccactgctcacaaagtacttggtgatatcgtttc 466

                                                                       
Query: 330 cctcgtgtacagacataacaccaggcttgagctctgcaattgtggaaacatggcctggca 389
           |||||||||| || | ||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 465 cctcgtgtaccgagagaacaccaggcttgagctctgcgattgtggaaacgtggcctggca 406

                                                                       
Query: 390 aaatacccatcaggccagttgtagccggtaccattaccatatcaacctccttattggtga 449
           ||| ||||||| | |||||||| || ||||| |||||||| ||||||||||| |||| ||
Sbjct: 405 aaacacccatctgaccagttgttgctggtacaattaccatgtcaacctccttgttggcga 346

                                      
Query: 450 tctcggacttgtaggggaggacgaagt 476
           |||||||||||||||||||||||||||
Sbjct: 345 tctcggacttgtaggggaggacgaagt 319



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 19  tgagtttgcaggcttcaactcacattctaaagatgtagatg 59
           ||||||||||  ||||| ||||||||||||| ||| |||||
Sbjct: 784 tgagtttgcaaacttcagctcacattctaaaaatgaagatg 744
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  325 bits (164), Expect = 8e-86
 Identities = 302/348 (86%)
 Strand = Plus / Plus

                                                                            
Query: 90       atcaaccagtcaatgcagcattgagcgcactgtgaacatccactccgatctgagcttccg 149
                ||||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 18479198 atcaaccagccaaagcggcattgagcgcactgtgaacatccactccaatctgagcttcgg 18479257

                                                                            
Query: 150      ccttctttaggtcagtcgaggctgatccaagcttggcagtgaattcagcaagacctttct 209
                ||||||  || ||||| ||||| ||||||||||||||  ||||||| || ||||| | ||
Sbjct: 18479258 ccttctccagttcagttgaggccgatccaagcttggcgttgaattccgcgagaccctgct 18479317

                                                                            
Query: 210      ggaccaagctttggtcaatctgatcaagggggacagcctcaacagccacaacatcagtaa 269
                |||||  |  | |||| ||||| || ||||||||||||||||||||||| | |||||  |
Sbjct: 18479318 ggaccgcggctgggtcgatctggtccagggggacagcctcaacagccacgatatcagcga 18479377

                                                                            
Query: 270      tggagtttgcatggatgaatgcaaagccactgctcacaaagtactttgtaacatcatttc 329
                |||||||||||||||  ||||||||||||||||||||||||||||| || | ||| ||||
Sbjct: 18479378 tggagtttgcatggacaaatgcaaagccactgctcacaaagtacttggtgatatcgtttc 18479437

                                                                            
Query: 330      cctcgtgtacagacataacaccaggcttgagctctgcaattgtggaaacatggcctggca 389
                |||||||||| || | ||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 18479438 cctcgtgtaccgagagaacaccaggcttgagctctgcgattgtggaaacgtggcctggca 18479497

                                                                
Query: 390      aaatacccatcaggccagttgtagccggtaccattaccatatcaacct 437
                ||| ||||||| | |||||||| || ||||| |||||||| |||||||
Sbjct: 18479498 aaacacccatctgaccagttgttgctggtacaattaccatgtcaacct 18479545



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                           
Query: 434      acctccttattggtgatctcggacttgtaggggaggacgaagt 476
                |||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 18487418 acctccttgttggcgatctcggacttgtaggggaggacgaagt 18487460



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                           
Query: 434      acctccttattggtgatctcggacttgtaggggaggacgaagt 476
                |||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 18481143 acctccttgttggcgatctcggacttgtaggggaggacgaagt 18481185



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 19       tgagtttgcaggcttcaactcacattctaaagatgtagatg 59
                ||||||||||  ||||| ||||||||||||| ||| |||||
Sbjct: 18479119 tgagtttgcaaacttcagctcacattctaaaaatgaagatg 18479159
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>dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1457_D07
          Length = 103688

 Score =  325 bits (164), Expect = 8e-86
 Identities = 302/348 (86%)
 Strand = Plus / Plus

                                                                        
Query: 90   atcaaccagtcaatgcagcattgagcgcactgtgaacatccactccgatctgagcttccg 149
            ||||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 7954 atcaaccagccaaagcggcattgagcgcactgtgaacatccactccaatctgagcttcgg 8013

                                                                        
Query: 150  ccttctttaggtcagtcgaggctgatccaagcttggcagtgaattcagcaagacctttct 209
            ||||||  || ||||| ||||| ||||||||||||||  ||||||| || ||||| | ||
Sbjct: 8014 ccttctccagttcagttgaggccgatccaagcttggcgttgaattccgcgagaccctgct 8073

                                                                        
Query: 210  ggaccaagctttggtcaatctgatcaagggggacagcctcaacagccacaacatcagtaa 269
            |||||  |  | |||| ||||| || ||||||||||||||||||||||| | |||||  |
Sbjct: 8074 ggaccgcggctgggtcgatctggtccagggggacagcctcaacagccacgatatcagcga 8133

                                                                        
Query: 270  tggagtttgcatggatgaatgcaaagccactgctcacaaagtactttgtaacatcatttc 329
            |||||||||||||||  ||||||||||||||||||||||||||||| || | ||| ||||
Sbjct: 8134 tggagtttgcatggacaaatgcaaagccactgctcacaaagtacttggtgatatcgtttc 8193

                                                                        
Query: 330  cctcgtgtacagacataacaccaggcttgagctctgcaattgtggaaacatggcctggca 389
            |||||||||| || | ||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 8194 cctcgtgtaccgagagaacaccaggcttgagctctgcgattgtggaaacgtggcctggca 8253

                                                            
Query: 390  aaatacccatcaggccagttgtagccggtaccattaccatatcaacct 437
            ||| ||||||| | |||||||| || ||||| |||||||| |||||||
Sbjct: 8254 aaacacccatctgaccagttgttgctggtacaattaccatgtcaacct 8301



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                        
Query: 434   acctccttattggtgatctcggacttgtaggggaggacgaagt 476
             |||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 16174 acctccttgttggcgatctcggacttgtaggggaggacgaagt 16216



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                       
Query: 434  acctccttattggtgatctcggacttgtaggggaggacgaagt 476
            |||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 9899 acctccttgttggcgatctcggacttgtaggggaggacgaagt 9941



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 19   tgagtttgcaggcttcaactcacattctaaagatgtagatg 59
            ||||||||||  ||||| ||||||||||||| ||| |||||
Sbjct: 7875 tgagtttgcaaacttcagctcacattctaaaaatgaagatg 7915
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>dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_B11
          Length = 102824

 Score =  325 bits (164), Expect = 8e-86
 Identities = 302/348 (86%)
 Strand = Plus / Plus

                                                                         
Query: 90    atcaaccagtcaatgcagcattgagcgcactgtgaacatccactccgatctgagcttccg 149
             ||||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 71046 atcaaccagccaaagcggcattgagcgcactgtgaacatccactccaatctgagcttcgg 71105

                                                                         
Query: 150   ccttctttaggtcagtcgaggctgatccaagcttggcagtgaattcagcaagacctttct 209
             ||||||  || ||||| ||||| ||||||||||||||  ||||||| || ||||| | ||
Sbjct: 71106 ccttctccagttcagttgaggccgatccaagcttggcgttgaattccgcgagaccctgct 71165

                                                                         
Query: 210   ggaccaagctttggtcaatctgatcaagggggacagcctcaacagccacaacatcagtaa 269
             |||||  |  | |||| ||||| || ||||||||||||||||||||||| | |||||  |
Sbjct: 71166 ggaccgcggctgggtcgatctggtccagggggacagcctcaacagccacgatatcagcga 71225

                                                                         
Query: 270   tggagtttgcatggatgaatgcaaagccactgctcacaaagtactttgtaacatcatttc 329
             |||||||||||||||  ||||||||||||||||||||||||||||| || | ||| ||||
Sbjct: 71226 tggagtttgcatggacaaatgcaaagccactgctcacaaagtacttggtgatatcgtttc 71285

                                                                         
Query: 330   cctcgtgtacagacataacaccaggcttgagctctgcaattgtggaaacatggcctggca 389
             |||||||||| || | ||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 71286 cctcgtgtaccgagagaacaccaggcttgagctctgcgattgtggaaacgtggcctggca 71345

                                                             
Query: 390   aaatacccatcaggccagttgtagccggtaccattaccatatcaacct 437
             ||| ||||||| | |||||||| || ||||| |||||||| |||||||
Sbjct: 71346 aaacacccatctgaccagttgttgctggtacaattaccatgtcaacct 71393



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                        
Query: 434   acctccttattggtgatctcggacttgtaggggaggacgaagt 476
             |||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 79266 acctccttgttggcgatctcggacttgtaggggaggacgaagt 79308



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                        
Query: 434   acctccttattggtgatctcggacttgtaggggaggacgaagt 476
             |||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 72991 acctccttgttggcgatctcggacttgtaggggaggacgaagt 73033



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 19    tgagtttgcaggcttcaactcacattctaaagatgtagatg 59
             ||||||||||  ||||| ||||||||||||| ||| |||||
Sbjct: 70967 tgagtttgcaaacttcagctcacattctaaaaatgaagatg 71007
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>gb|AC124966.33| Medicago truncatula clone mth2-8i15, complete sequence
          Length = 121141

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 134/166 (80%)
 Strand = Plus / Minus

                                                                         
Query: 272   gagtttgcatggatgaatgcaaagccactgctcacaaagtactttgtaacatcatttccc 331
             ||||||||||||| ||| || ||||||||||| ||||| ||||| ||   |||||| || 
Sbjct: 89926 gagtttgcatggacgaaagcgaagccactgcttacaaaatacttggtcgaatcattccct 89867

                                                                         
Query: 332   tcgtgtacagacataacaccaggcttgagctctgcaattgtggaaacatggcctggcaaa 391
             || ||||||  ||| || ||||| || | |||||||||||| |||||||| ||||| |  
Sbjct: 89866 tcttgtacaatcatgaccccaggtttcaactctgcaattgttgaaacatgtcctgggagg 89807

                                                           
Query: 392   atacccatcaggccagttgtagccggtaccattaccatatcaacct 437
             ||||||||| |||| ||||| || || |  ||||||| ||||||||
Sbjct: 89806 atacccatctggcctgttgtggctgggattattaccagatcaacct 89761
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>ref|NM_187349.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 327

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                      
Query: 434 acctccttattggtgatctcggacttgtaggggaggacgaagt 476
           |||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 281 acctccttgttggcgatctcggacttgtaggggaggacgaagt 239
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>dbj|D10660.1|IPBF1ATP Sweet potato mitochondrial F1-ATPase delta subunit mRNA, complete
           cds
          Length = 936

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 83/100 (83%)
 Strand = Plus / Minus

                                                                       
Query: 275 tttgcatggatgaatgcaaagccactgctcacaaagtactttgtaacatcatttccctcg 334
           |||||||||||||| || ||||| |  ||||||||||| || |  |||||||| || |||
Sbjct: 507 tttgcatggatgaaagcgaagccgccactcacaaagtatttggacacatcattaccttcg 448

                                                   
Query: 335 tgtacagacataacaccaggcttgagctctgcaattgtgg 374
           || || ||||| ||||||||||| ||||| ||||| ||||
Sbjct: 447 tgaaccgacatgacaccaggcttcagctcagcaatcgtgg 408
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>gb|BT014114.1| Lycopersicon esculentum clone 133218F, mRNA sequence
          Length = 937

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                       
Query: 287 aatgcaaagccactgctcacaaagtactttgtaacatcatttccctcgtgtacagacata 346
           |||||||| ||||  ||||||||||||||  | |||||||| |||||||| || || | |
Sbjct: 506 aatgcaaatccaccactcacaaagtacttgttcacatcattgccctcgtgaactgataaa 447

                                     
Query: 347 acaccaggcttgagctctgcaattgt 372
           | ||||||||| ||||| ||||||||
Sbjct: 446 ataccaggcttcagctcagcaattgt 421
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>gb|BT018156.1| Zea mays clone EL01N0556B05.c mRNA sequence
          Length = 429

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                       
Query: 100 caatgcagcattgagcgcactgtgaacatccactccgatctgagcttccgccttctttag 159
           ||||||||||||| | |||||| ||||||| |||||||| || || || |||||||  ||
Sbjct: 116 caatgcagcattgggggcactgggaacatcgactccgatttgggcctcagccttctccag 57

                                                 
Query: 160 gtcagtcgaggctgatccaagcttggcagtgaattcag 197
           |||| |  ||||  | |||||||||| || ||||||||
Sbjct: 56  gtcattaaaggccaaaccaagcttgggagggaattcag 19
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>gb|L13320.1|PEAATPASE Pisum sativum F1-ATPase delta-prime subunit gene, complete cds
          Length = 3009

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                        
Query: 242  acagcctcaacagccacaacatcagtaatggagtttgcatggatgaatgcaaagccactg 301
            |||||||| ||||| | || ||||| ||  |||||||| |||||||||   |||||||||
Sbjct: 2666 acagcctctacagcaataatatcagcaacagagtttgcgtggatgaatcggaagccactg 2607

                          
Query: 302  ctcacaaagtactt 315
            || ||||| |||||
Sbjct: 2606 cttacaaaatactt 2593
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>ref|XM_520988.1| PREDICTED: Pan troglodytes similar to radixin (LOC465550), mRNA
          Length = 649

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 181 cttggcagtgaattcagcaag 201
           |||||||||||||||||||||
Sbjct: 286 cttggcagtgaattcagcaag 266
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>ref|XM_522176.1| PREDICTED: Pan troglodytes similar to radixin (LOC466776), mRNA
          Length = 1788

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 181  cttggcagtgaattcagcaag 201
            |||||||||||||||||||||
Sbjct: 1317 cttggcagtgaattcagcaag 1297
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>ref|NM_204751.1| Gallus gallus radixin (RDX), mRNA
          Length = 2179

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 181  cttggcagtgaattcagcaag 201
            |||||||||||||||||||||
Sbjct: 1517 cttggcagtgaattcagcaag 1497
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>ref|NM_002906.3| Homo sapiens radixin (RDX), mRNA
          Length = 4498

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 181  cttggcagtgaattcagcaag 201
            |||||||||||||||||||||
Sbjct: 1591 cttggcagtgaattcagcaag 1571
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>emb|AJ249838.1|GGA249838 Gallus gallus mRNA for radixin (rdx gene)
          Length = 2179

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 181  cttggcagtgaattcagcaag 201
            |||||||||||||||||||||
Sbjct: 1517 cttggcagtgaattcagcaag 1497
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>ref|XM_857605.1| PREDICTED: Canis familiaris similar to radixin, transcript variant 6
            (LOC479446), mRNA
          Length = 2006

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 181  cttggcagtgaattcagcaag 201
            |||||||||||||||||||||
Sbjct: 1421 cttggcagtgaattcagcaag 1401
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>ref|XM_536581.2| PREDICTED: Canis familiaris similar to radixin, transcript variant 1
            (LOC479446), mRNA
          Length = 2065

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 181  cttggcagtgaattcagcaag 201
            |||||||||||||||||||||
Sbjct: 1364 cttggcagtgaattcagcaag 1344
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>gb|BC047109.1| Homo sapiens radixin, mRNA (cDNA clone MGC:48283 IMAGE:5284438),
            complete cds
          Length = 4412

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 181  cttggcagtgaattcagcaag 201
            |||||||||||||||||||||
Sbjct: 1491 cttggcagtgaattcagcaag 1471
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>emb|AL137751.1|HSM802383 Homo sapiens mRNA; cDNA DKFZp434I0812 (from clone DKFZp434I0812);
           partial cds
          Length = 3658

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 181 cttggcagtgaattcagcaag 201
           |||||||||||||||||||||
Sbjct: 748 cttggcagtgaattcagcaag 728
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>gb|M86444.1|PIGMOESB Sus scrofa moesin B mRNA, complete cds
          Length = 2320

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 181  cttggcagtgaattcagcaag 201
            |||||||||||||||||||||
Sbjct: 1491 cttggcagtgaattcagcaag 1471
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>ref|NM_001009576.1| Sus scrofa moesin B (RDX), mRNA
          Length = 2320

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 181  cttggcagtgaattcagcaag 201
            |||||||||||||||||||||
Sbjct: 1491 cttggcagtgaattcagcaag 1471
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>gb|AC006210.4| Homo sapiens X BAC GS1-309P15 (Genome Systems Human BAC Library) complete
              sequence
          Length = 185638

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 181    cttggcagtgaattcagcaag 201
              |||||||||||||||||||||
Sbjct: 102685 cttggcagtgaattcagcaag 102665
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>emb|BX648536.1|HSM808684 Homo sapiens mRNA; cDNA DKFZp779D2226 (from clone DKFZp779D2226)
          Length = 3215

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 181 cttggcagtgaattcagcaag 201
           |||||||||||||||||||||
Sbjct: 307 cttggcagtgaattcagcaag 287
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>emb|CT573324.3| CH251-10E6, complete sequence
          Length = 169419

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   cttggcagtgaattcagcaag 201
             |||||||||||||||||||||
Sbjct: 98882 cttggcagtgaattcagcaag 98862
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>dbj|AP000901.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-686G14, complete
             sequence
          Length = 205903

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 181   cttggcagtgaattcagcaag 201
             |||||||||||||||||||||
Sbjct: 87936 cttggcagtgaattcagcaag 87956
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>gb|L02320.1|HUMRADIXIN Human radixin mRNA, complete cds
          Length = 2022

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 181  cttggcagtgaattcagcaag 201
            |||||||||||||||||||||
Sbjct: 1311 cttggcagtgaattcagcaag 1291
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>dbj|AB021794.1| Pyrus pyrifolia PPFRU36 mRNA for F1-ATPase, partial cds
          Length = 435

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 60/73 (82%)
 Strand = Plus / Minus

                                                                       
Query: 231 gatcaagggggacagcctcaacagccacaacatcagtaatggagtttgcatggatgaatg 290
           ||||||| ||||||||||| ||||| |  |  || | ||| ||||| || ||||||||||
Sbjct: 91  gatcaagagggacagcctctacagcaattatgtctgcaatagagttcgcgtggatgaatg 32

                        
Query: 291 caaagccactgct 303
           |||| ||||||||
Sbjct: 31  caaaaccactgct 19
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>gb|AE006312.1| Lactococcus lactis subsp. lactis IL1403 section 74 of 218 of the
            complete genome
          Length = 10348

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 95   ccagtcaatgcagcattgag 114
            ||||||||||||||||||||
Sbjct: 5936 ccagtcaatgcagcattgag 5955
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>emb|CR377226.19| Zebrafish DNA sequence from clone DKEY-120I4 in linkage group 8,
             complete sequence
          Length = 173122

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   ttggtcaatctgatcaaggg 239
             ||||||||||||||||||||
Sbjct: 26475 ttggtcaatctgatcaaggg 26456
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>emb|CR711892.2|CNS0GC8W Tetraodon nigroviridis full-length cDNA
          Length = 721

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 372 ccactgctcacaaagtactt 353
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>emb|CR717757.2|CNS0GGRN Tetraodon nigroviridis full-length cDNA
          Length = 681

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 363 ccactgctcacaaagtactt 344
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>emb|CR704896.2|CNS0G6UK Tetraodon nigroviridis full-length cDNA
          Length = 1001

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 355 ccactgctcacaaagtactt 336
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>emb|CR678047.2|CNS0FM52 Tetraodon nigroviridis full-length cDNA
          Length = 680

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 333 ccactgctcacaaagtactt 314
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>emb|CR677999.2|CNS0FM3R Tetraodon nigroviridis full-length cDNA
          Length = 689

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 343 ccactgctcacaaagtactt 324
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>emb|CR671359.2|CNS0FGZP Tetraodon nigroviridis full-length cDNA
          Length = 675

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 333 ccactgctcacaaagtactt 314
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>emb|CR670662.2|CNS0FGGC Tetraodon nigroviridis full-length cDNA
          Length = 706

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 365 ccactgctcacaaagtactt 346
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>emb|CR665129.2|CNS0FC6N Tetraodon nigroviridis full-length cDNA
          Length = 696

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 347 ccactgctcacaaagtactt 328
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>emb|CR661561.2|CNS0F9FJ Tetraodon nigroviridis full-length cDNA
          Length = 671

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 347 ccactgctcacaaagtactt 328
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>emb|CR658320.2|CNS0F6XI Tetraodon nigroviridis full-length cDNA
          Length = 691

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 345 ccactgctcacaaagtactt 326
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>emb|CR655014.2|CNS0F4DO Tetraodon nigroviridis full-length cDNA
          Length = 711

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 364 ccactgctcacaaagtactt 345
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>emb|CR639459.2|CNS0ESDL Tetraodon nigroviridis full-length cDNA
          Length = 724

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 377 ccactgctcacaaagtactt 358
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>emb|CR638072.2|CNS0ERB2 Tetraodon nigroviridis full-length cDNA
          Length = 729

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 380 ccactgctcacaaagtactt 361
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>emb|CR632495.2|CNS0EN05 Tetraodon nigroviridis full-length cDNA
          Length = 712

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 363 ccactgctcacaaagtactt 344
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>emb|CR631144.2|CNS0ELYL Tetraodon nigroviridis full-length cDNA
          Length = 712

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 363 ccactgctcacaaagtactt 344
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>emb|CR632369.2|CNS0EMWN Tetraodon nigroviridis full-length cDNA
          Length = 712

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 363 ccactgctcacaaagtactt 344
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>emb|CR632349.2|CNS0EMW3 Tetraodon nigroviridis full-length cDNA
          Length = 710

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 363 ccactgctcacaaagtactt 344
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>emb|CR632195.2|CNS0EMRT Tetraodon nigroviridis full-length cDNA
          Length = 711

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 363 ccactgctcacaaagtactt 344
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>emb|CR631831.2|CNS0EMHP Tetraodon nigroviridis full-length cDNA
          Length = 702

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccactgctcacaaagtactt 315
           ||||||||||||||||||||
Sbjct: 352 ccactgctcacaaagtactt 333
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>emb|BX248419.4| Human DNA sequence from clone DASS-254G14 on chromosome 6, complete
             sequence
          Length = 122321

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    aaaagaacatcaaaatgtaa 79
             ||||||||||||||||||||
Sbjct: 81150 aaaagaacatcaaaatgtaa 81131
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>emb|AL844220.3| Human DNA sequence from clone DAQB-44E15 on chromosome 6 Contains the
             TRIM10 gene for tripartite motif-containing 10, the TRIM15
             gene for tripartite motif-containing 15, the TRIM26 gene
             for tripartite motif-containing 26, the PAIP1P1 pseudogene
             for poly(A) binding protein interacting protein 1
             pseudogene 1, the HCG17 gene for HLA complex group 17, the
             TRIM26P pseudogene for tripartite motif-containing 26, the
             HLA-L pseudogene for major histocompatibility complex,
             class I, L, the 3' end of the HCG18 gene for HLA complex
             group 18 and 3 CpG islands, complete sequence
          Length = 152298

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    aaaagaacatcaaaatgtaa 79
             ||||||||||||||||||||
Sbjct: 97570 aaaagaacatcaaaatgtaa 97551
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>emb|AL662832.5| Human DNA sequence from clone XXbac-141O14 on chromosome 6 contains the
             5' end of the TRIM26 gene for tripartite motif containing
             26, two putative novel transcript, a  tripartite motif
             containing 26 (TRIM26) pseudogene, a MHC class 1
             pseudogene, the TRIM39 gene for tripartite motif
             containing 39, the RPP21 gene for ribonuclease p subunit
             and four CpG islands, complete sequence
          Length = 161348

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    aaaagaacatcaaaatgtaa 79
             ||||||||||||||||||||
Sbjct: 57065 aaaagaacatcaaaatgtaa 57046
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>emb|AL662782.3| Human DNA sequence from clone XXbac-252N6 on chromosome 6 contains a
             putative novel transcript, a tripartite motif containing
             26 (TRIM26) pseudogene, a MHC class 1 pseudogene and two
             CpG islands, complete sequence
          Length = 62456

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    aaaagaacatcaaaatgtaa 79
             ||||||||||||||||||||
Sbjct: 40354 aaaagaacatcaaaatgtaa 40335
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>emb|AL080284.20|HSJ177I10 Human DNA sequence from clone RP1-177I10 on chromosome 6q16.1-16.3
              Contains a novel gene, complete sequence
          Length = 160750

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     gaacatcaaaatgtaagatg 83
              ||||||||||||||||||||
Sbjct: 130820 gaacatcaaaatgtaagatg 130801
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>emb|AL023287.1|SPBC23E6 S.pombe chromosome II cosmid c23E6
          Length = 34486

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   acagcctcaacagccacaacatca 265
             |||||||||||||| |||||||||
Sbjct: 27489 acagcctcaacagcaacaacatca 27512
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>emb|AJ536587.1|MGL536587 Marthasterias glacialis partial mRNA for extracellular
           signal-regulated protein kinase (erk gene)
          Length = 1247

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 268 aatggagtttgcatggatga 287
           ||||||||||||||||||||
Sbjct: 363 aatggagtttgcatggatga 344
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>emb|CR388382.5| Human DNA sequence from clone DADB-23P23 on chromosome 6, complete
             sequence
          Length = 109067

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    aaaagaacatcaaaatgtaa 79
             ||||||||||||||||||||
Sbjct: 85364 aaaagaacatcaaaatgtaa 85345
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>emb|AL672026.11| Mouse DNA sequence from clone RP23-403O11 on chromosome X, complete
              sequence
          Length = 200566

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 66     acatcaaaatgtaagatgtctgtc 89
              |||||||||||||| |||||||||
Sbjct: 109326 acatcaaaatgtaatatgtctgtc 109303



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 66    acatcaaaatgtaagatgtctgtc 89
             |||||||||||||| |||||||||
Sbjct: 72192 acatcaaaatgtaatatgtctgtc 72215
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>gb|AC073565.5| Mus musculus strain C57BL/6J chromosome 12 clone RP23-70F21, complete
             sequence
          Length = 180673

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   ttcagcaagacctttctgga 212
             ||||||||||||||||||||
Sbjct: 15829 ttcagcaagacctttctgga 15810
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>ref|NM_001022530.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC23E6.09),
           partial mRNA
          Length = 3309

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 242 acagcctcaacagccacaacatca 265
           |||||||||||||| |||||||||
Sbjct: 528 acagcctcaacagcaacaacatca 551
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 56       gatgaaaagaacatcaaaat 75
                ||||||||||||||||||||
Sbjct: 18401920 gatgaaaagaacatcaaaat 18401901
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 255      ccacaacatcagtaatggag 274
                ||||||||||||||||||||
Sbjct: 29804305 ccacaacatcagtaatggag 29804324
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>emb|BX927189.6| Human DNA sequence from clone DAMA-83L10 on chromosome 6, complete
             sequence
          Length = 124330

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    aaaagaacatcaaaatgtaa 79
             ||||||||||||||||||||
Sbjct: 52579 aaaagaacatcaaaatgtaa 52560
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>gb|AC158314.5| Mus musculus chromosome 7, clone RP23-145E21, complete sequence
          Length = 185668

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     taaagatgtagatgaaaaga 65
              ||||||||||||||||||||
Sbjct: 119117 taaagatgtagatgaaaaga 119098
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>gb|AC079181.3|AC079181 Mus musculus strain C57BL/6J chromosome 12 clone RP23-197F8, complete
              sequence
          Length = 209058

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    ttcagcaagacctttctgga 212
              ||||||||||||||||||||
Sbjct: 197558 ttcagcaagacctttctgga 197539
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>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0683B11
          Length = 155955

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   ccacaacatcagtaatggag 274
             ||||||||||||||||||||
Sbjct: 48400 ccacaacatcagtaatggag 48419
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>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region
          Length = 2229817

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 60      aaaagaacatcaaaatgtaa 79
               ||||||||||||||||||||
Sbjct: 1695625 aaaagaacatcaaaatgtaa 1695644
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>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0463G11
          Length = 154188

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     gatgaaaagaacatcaaaat 75
              ||||||||||||||||||||
Sbjct: 116656 gatgaaaagaacatcaaaat 116637
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>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0463D04
          Length = 145828

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    gatgaaaagaacatcaaaat 75
             ||||||||||||||||||||
Sbjct: 63794 gatgaaaagaacatcaaaat 63775
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>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region
          Length = 1750601

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 60      aaaagaacatcaaaatgtaa 79
               ||||||||||||||||||||
Sbjct: 1238090 aaaagaacatcaaaatgtaa 1238109
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>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region
               locus, strain C57BL/6
          Length = 2500000

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 193     ttcagcaagacctttctgga 212
               ||||||||||||||||||||
Sbjct: 1200456 ttcagcaagacctttctgga 1200437
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>gb|AF042275.1|AF042275 Oryza sativa anther-specific protein gene, complete cds
          Length = 2757

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  gatgaaaagaacatcaaaat 75
           ||||||||||||||||||||
Sbjct: 664 gatgaaaagaacatcaaaat 645
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>emb|AL162511.5|CNS01RHV Human chromosome 14 DNA sequence BAC R-259K15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 165126

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   catcagtaatggagtttgca 280
             ||||||||||||||||||||
Sbjct: 88178 catcagtaatggagtttgca 88197
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>gb|AC004191.1|AC004191 Homo sapiens clone UWGC:y18c296 from 6p21, complete sequence
          Length = 45601

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    aaaagaacatcaaaatgtaa 79
             ||||||||||||||||||||
Sbjct: 21938 aaaagaacatcaaaatgtaa 21957
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>dbj|AB023053.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region,
            clone:53L9, complete sequence
          Length = 14868

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   aaaagaacatcaaaatgtaa 79
            ||||||||||||||||||||
Sbjct: 3910 aaaagaacatcaaaatgtaa 3929


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,882,475
Number of Sequences: 3902068
Number of extensions: 3882475
Number of successful extensions: 76886
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76677
Number of HSP's gapped (non-prelim): 203
length of query: 477
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 455
effective length of database: 17,147,199,772
effective search space: 7801975896260
effective search space used: 7801975896260
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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