Clone Name | rbasd24h03 |
---|---|
Clone Library Name | barley_pub |
>CABYR_MACFA (Q4R3X7) Calcium-binding tyrosine phosphorylation-regulated protein| Length = 487 Score = 32.0 bits (71), Expect = 1.1 Identities = 23/89 (25%), Positives = 33/89 (37%) Frame = -3 Query: 457 VMEFYRSHQQTLINTFPEGTDSTDSVESPEKFEEASTEYALPTASPFSDFVDNAKKTMIE 278 + + + Q + + EGT +E ++ E+ S E +PT S D T E Sbjct: 55 IKDLVKQFHQIKVEKWSEGTTPQKKLECLKEPEKTSVESKVPTQMEKSTDTDEDNVTRTE 114 Query: 277 MVDNITNFFQDLFHNPAEAEAGPGSSSKK 191 D T F AE G SS K Sbjct: 115 YSDKTTQFPSVYAEPGAEQTEAVGDSSSK 143
>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) (Brain-derived HLMN protein) Length = 5038 Score = 31.6 bits (70), Expect = 1.4 Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 4/94 (4%) Frame = -3 Query: 421 INTFPEGTDSTDSVESPEKFEEASTEYALPTA----SPFSDFVDNAKKTMIEMVDNITNF 254 I + PEG + SPEK E Y LPTA SP + K+ + + + Sbjct: 1768 IESDPEGFEI-----SPEKIIEVQKVYKLPTAVSLYSPTDEQSVMQKEGAQKALKSAEEM 1822 Query: 253 FQDLFHNPAEAEAGPGSSSKKHSFAEMAAGGSFM 152 ++++ H P + +A P ++ + F + G + Sbjct: 1823 YEEMMHKPHKYKAFPAANERDEVFEKEPLYGGML 1856
>AT8B3_HUMAN (O60423) Probable phospholipid-transporting ATPase IK (EC 3.6.3.1)| (ATPase class I type 8B member 3) Length = 1310 Score = 31.6 bits (70), Expect = 1.4 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 10/86 (11%) Frame = -3 Query: 268 NITNFFQDLFHNPAEAEAGPGSSSKKHSFAEMAAGGSFMALAMAVILVVLFKRA*T---- 101 ++ NFF L+ + AGP S S SFA + A +++ M VIL++ + A Sbjct: 1100 SLVNFFMTLWIS--RDTAGPASFSDHQSFAVVVALSCLLSITMEVILIIKYWTALCVATI 1157 Query: 100 ------YTASSNALRAYWALNLSKIT 41 Y + +++W +S T Sbjct: 1158 LLSLGFYAIMTTTTQSFWLFRVSPTT 1183
>MARK1_RAT (O08678) Serine/threonine-protein kinase MARK1 (EC 2.7.11.1)| (MAP/microtubule affinity-regulating kinase 1) Length = 793 Score = 30.4 bits (67), Expect = 3.1 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 3/82 (3%) Frame = -3 Query: 412 FPEGTDSTDSVESPEKFEEASTEYALPTASPFSDFVDNA---KKTMIEMVDNITNFFQDL 242 FP G+ S + + E S Y+ P ASP D A + T ++ IT+ F + Sbjct: 604 FPRGSSSRSTFHGEQLRERRSAAYSGPPASPSHDTAALAHARRGTSTGIISKITSKF--V 661 Query: 241 FHNPAEAEAGPGSSSKKHSFAE 176 +P+E EA + + + S E Sbjct: 662 RRDPSEGEASGRTDTARGSSGE 683
>NEUR2_RAT (Q64627) Sialidase-2 (EC 3.2.1.18) (Cytosolic sialidase)| (N-acetyl-alpha-neuraminidase 2) Length = 379 Score = 29.6 bits (65), Expect = 5.3 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = -2 Query: 368 EI*RGVHRICTAHCLTFLGLRGQCEEDDDRDG*QHNQLFPRPVPQPGGS*G 216 E+ G HR+ + +F+G R Q + +D Q NQ+ + V P G G Sbjct: 223 EVGTGAHRVVYLNARSFIGARVQAQSPNDGLDFQDNQVVSKLVEPPHGCHG 273
>JAG1A_BRARE (Q90Y57) Jagged-1a precursor (Jagged1a) (Jagged1)| Length = 1242 Score = 29.6 bits (65), Expect = 5.3 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 6/66 (9%) Frame = -2 Query: 209 GLIL*EAFVCGDGGWWIFHGSCHGGHPSCSVQEGM-NVYC-----KFKRSSCLLGLKSVE 48 GL L + VCG G H GGH SC Q+G YC + S CL G ++ Sbjct: 591 GLRLISSSVCGPHGRCRSHSHA-GGHFSCDCQDGFTGTYCHENINDCESSPCLSGGTCID 649 Query: 47 NNSCYE 30 + Y+ Sbjct: 650 KINAYQ 655
>MARK1_HUMAN (Q9P0L2) Serine/threonine-protein kinase MARK1 (EC 2.7.11.1)| (MAP/microtubule affinity-regulating kinase 1) Length = 795 Score = 29.3 bits (64), Expect = 6.9 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 3/82 (3%) Frame = -3 Query: 412 FPEGTDSTDSVESPEKFEEASTEYALPTASPFSD---FVDNAKKTMIEMVDNITNFFQDL 242 FP G+ S + + E S Y P ASP + F + T ++ IT+ F + Sbjct: 604 FPRGSSSRSTFHGEQLRERRSVAYNGPPASPSHETGAFAHARRGTSTGIISKITSKF--V 661 Query: 241 FHNPAEAEAGPGSSSKKHSFAE 176 +P+E EA + + + + E Sbjct: 662 RRDPSEGEASGRTDTSRSTSGE 683
>TYRP2_CHICK (O93505) L-dopachrome tautomerase precursor (EC 5.3.3.12) (DT)| (DCT) (L-dopachrome delta-isomerase) (Tyrosinase-related protein 2) (TRP-2) (TRP2) Length = 521 Score = 29.3 bits (64), Expect = 6.9 Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 3/36 (8%) Frame = -3 Query: 211 PGSSSKKHSFAEMAA---GGSFMALAMAVILVVLFK 113 PGS + ++A M GG+ +ALA+ V+L+VLF+ Sbjct: 461 PGSLEESQAWAAMVGSTIGGALIALAVLVLLLVLFQ 496
>KEL1_YEAST (P38853) Kelch repeat-containing protein 1| Length = 1164 Score = 28.9 bits (63), Expect = 9.0 Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 11/110 (10%) Frame = -3 Query: 469 KNERVMEFYRSHQQTLINTFPEGTDSTDSVESPEKFEEASTEYALPTASPFSDFVDNAKK 290 +NER+ + H + +IN + S+ S K A++ + ++S S +N +K Sbjct: 907 ENERLKNESKQHNEDIINNVANYSSQLGSLISHWKENRANSSFLESSSSLISVSDENGEK 966 Query: 289 TMIE-----------MVDNITNFFQDLFHNPAEAEAGPGSSSKKHSFAEM 173 T+ E +++ +TN DL E S ++ +M Sbjct: 967 TVGEPYGDQSRHHRVVINKLTNRLDDLLERSQELTISKEKLSSEYHALKM 1016
>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3530 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Frame = +1 Query: 136 PPWQEP*KIHQPPSPQTNAS*RMSP--VQPQLPP 231 PPW P H PP+PQ + + P V P++PP Sbjct: 702 PPWAAP--AHVPPAPQASGWAFVEPPAVSPEVPP 733
>MAC1_SCHPO (Q10268) Membrane-anchored protein 1 precursor| Length = 756 Score = 28.9 bits (63), Expect = 9.0 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%) Frame = -3 Query: 454 MEFYRSHQQTLINTFPEGTDS----TDSVESPEKFEEASTEYALPTASPFSDFVDNAKKT 287 +E YR+ Q I++ EGTDS ++ S + E TA PF+ NA T Sbjct: 343 LEPYRNRQAGSISS--EGTDSRFFDVENQVSVAQTPSVKPEMFPKTARPFAAIHANASST 400 Query: 286 MIEMVDNITN 257 + +NIT+ Sbjct: 401 QLRNTENITH 410 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,734,818 Number of Sequences: 219361 Number of extensions: 1592424 Number of successful extensions: 4650 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 4480 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4647 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3985467738 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)