>ref|XM_475731.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2757

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 385  aaccatcttcagatgcattgtcttcataatctgcttcatcca 426
            |||||||||| ||||||||||| ||| |||||||||||||||
Sbjct: 2491 aaccatcttctgatgcattgtcctcaaaatctgcttcatcca 2450



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 474  ttcacctcagcataactcagaggatctgctagttgtctcctttggttt 521
            |||||||||||||||||| ||||||||| |||||| |||  |||||||
Sbjct: 2402 ttcacctcagcataactctgaggatctgatagttggctctgttggttt 2355

>gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0483D07,
              complete sequence
          Length = 147122

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                        
Query: 385    aaccatcttcagatgcattgtcttcataatctgcttcatcca 426
              |||||||||| ||||||||||| ||| |||||||||||||||
Sbjct: 131527 aaccatcttctgatgcattgtcctcaaaatctgcttcatcca 131568



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                              
Query: 474    ttcacctcagcataactcagaggatctgctagttgtctcctttggttt 521
              |||||||||||||||||| ||||||||| |||||| |||  |||||||
Sbjct: 131616 ttcacctcagcataactctgaggatctgatagttggctctgttggttt 131663



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 122    cgtgctctacttctgccatctttt 145
              |||||||||||||||||| |||||
Sbjct: 130734 cgtgctctacttctgccacctttt 130757

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                          
Query: 385      aaccatcttcagatgcattgtcttcataatctgcttcatcca 426
                |||||||||| ||||||||||| ||| |||||||||||||||
Sbjct: 25719158 aaccatcttctgatgcattgtcctcaaaatctgcttcatcca 25719199



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                                
Query: 474      ttcacctcagcataactcagaggatctgctagttgtctcctttggttt 521
                |||||||||||||||||| ||||||||| |||||| |||  |||||||
Sbjct: 25719247 ttcacctcagcataactctgaggatctgatagttggctctgttggttt 25719294



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 122      cgtgctctacttctgccatctttt 145
                |||||||||||||||||| |||||
Sbjct: 25718365 cgtgctctacttctgccacctttt 25718388

>dbj|AK065361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013014A12, full
            insert sequence
          Length = 4008

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 385  aaccatcttcagatgcattgtcttcataatctgcttcatcca 426
            |||||||||| ||||||||||| ||| |||||||||||||||
Sbjct: 3474 aaccatcttctgatgcattgtcctcaaaatctgcttcatcca 3433



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 474  ttcacctcagcataactcagaggatctgctagttgtctcctttggttt 521
            |||||||||||||||||| ||||||||| |||||| |||  |||||||
Sbjct: 3385 ttcacctcagcataactctgaggatctgatagttggctctgttggttt 3338



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 122  cgtgctctacttctgccatctttt 145
            |||||||||||||||||| |||||
Sbjct: 3746 cgtgctctacttctgccacctttt 3723

>emb|AL805980.28| Mouse DNA sequence from clone RP23-49C8 on chromosome X, complete
            sequence
          Length = 172618

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 259  tttttgtgagagaggatctggctatt 284
            ||||||||||| ||||||||||||||
Sbjct: 2874 tttttgtgagacaggatctggctatt 2899

>gb|AF539527.1| Mus musculus strain C57BL/6 O-linked GlcNAc transferase gene, complete
             cds
          Length = 46067

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 259   tttttgtgagagaggatctggctatt 284
             ||||||||||| ||||||||||||||
Sbjct: 35432 tttttgtgagacaggatctggctatt 35457

>emb|AL356858.19| Human DNA sequence from clone RP11-357K9 on chromosome Xp11.4-21.2
             Contains the PRRG1 gene for proline-rich Gla
             (G-carboxyglutamic acid) polypetide 1, a ferritin heavy
             polypeptide-like 17 (FTHL17) pseudogene and a CpG island,
             complete sequence
          Length = 128968

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 394   cagatgcattgtcttcataat 414
             |||||||||||||||||||||
Sbjct: 54020 cagatgcattgtcttcataat 54040

>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome
          Length = 1358633

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 376    ttactatagaaccatcttcagatgc 400
              ||||||||||||||||||| |||||
Sbjct: 587921 ttactatagaaccatcttctgatgc 587945

>gb|AC007548.10| Drosophila melanogaster clone BACR48M17, complete sequence
          Length = 160022

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     gcatacaaaatacagtacat 107
              ||||||||||||||||||||
Sbjct: 106765 gcatacaaaatacagtacat 106784

>gb|BC105810.1| Homo sapiens ribosomal protein S15, mRNA (cDNA clone MGC:111130
           IMAGE:6744553), complete cds
          Length = 537

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 tgctctacttctgccatctt 143
           ||||||||||||||||||||
Sbjct: 57  tgctctacttctgccatctt 38

>ref|XM_512237.1| PREDICTED: Pan troglodytes similar to ribosomal protein S15; rat
           insulinoma gene (LOC455550), mRNA
          Length = 550

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 tgctctacttctgccatctt 143
           ||||||||||||||||||||
Sbjct: 97  tgctctacttctgccatctt 78

>ref|XM_515900.1| PREDICTED: Pan troglodytes similar to ribosomal protein S15; rat
           insulinoma gene (LOC459733), mRNA
          Length = 504

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 tgctctacttctgccatctt 143
           ||||||||||||||||||||
Sbjct: 24  tgctctacttctgccatctt 5

>gb|BC080543.1| Homo sapiens cDNA clone IMAGE:5556479, with apparent retained
           intron
          Length = 1629

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 tgctctacttctgccatctt 143
           ||||||||||||||||||||
Sbjct: 33  tgctctacttctgccatctt 14

>gb|BC064908.1| Homo sapiens ribosomal protein S15, mRNA (cDNA clone MGC:70657
           IMAGE:6053159), complete cds
          Length = 539

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 tgctctacttctgccatctt 143
           ||||||||||||||||||||
Sbjct: 23  tgctctacttctgccatctt 4

>gb|AC079277.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-65N7, complete
              sequence
          Length = 190328

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      tcttgagttacaagcatgca 28
              ||||||||||||||||||||
Sbjct: 185253 tcttgagttacaagcatgca 185272

>ref|NM_001018.3| Homo sapiens ribosomal protein S15 (RPS15), mRNA
          Length = 531

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 tgctctacttctgccatctt 143
           ||||||||||||||||||||
Sbjct: 79  tgctctacttctgccatctt 60

>gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, complete sequence
          Length = 192584

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 381   atagaaccatcttcagatgc 400
             ||||||||||||||||||||
Sbjct: 90805 atagaaccatcttcagatgc 90824

>emb|AL355472.19| Human DNA sequence from clone RP5-827C21 on chromosome 1 Contains a
             ribosomal protein S15 (RPS15) pseudogene, three novel
             genes (LOC388753), the 3' end of the TARBP1 gene for TAR
             (HIV) RNA binding protein 1 and a CpG island, complete
             sequence
          Length = 92628

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   tgctctacttctgccatctt 143
             ||||||||||||||||||||
Sbjct: 29411 tgctctacttctgccatctt 29430

>emb|CR937046.1|PT147K15 Pan troglodytes chromosome 11 BAC PTB-147K15, complete sequence
          Length = 197298

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    tgctctacttctgccatctt 143
              ||||||||||||||||||||
Sbjct: 185702 tgctctacttctgccatctt 185683

>emb|CR857922.1| Pongo pygmaeus mRNA; cDNA DKFZp469I158 (from clone DKFZp469I158)
          Length = 677

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 tgctctacttctgccatctt 143
           ||||||||||||||||||||
Sbjct: 40  tgctctacttctgccatctt 21

>dbj|AK095817.1| Homo sapiens cDNA FLJ38498 fis, clone FELNG2000241
          Length = 1613

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 221 atcccttggttttgatttgg 240
           ||||||||||||||||||||
Sbjct: 752 atcccttggttttgatttgg 733

>gb|AC068765.16| Homo sapiens 3 BAC RP11-115H18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 151482

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    ttggagttcataatattcct 349
              ||||||||||||||||||||
Sbjct: 104649 ttggagttcataatattcct 104668

>ref|XM_940289.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S15 (RIG
           protein), transcript variant 3 (LOC401019), mRNA
          Length = 534

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 tgctctacttctgccatctt 143
           ||||||||||||||||||||
Sbjct: 47  tgctctacttctgccatctt 28

>ref|XM_376154.3| PREDICTED: Homo sapiens similar to 40S ribosomal protein S15 (RIG
           protein), transcript variant 1 (LOC401019), mRNA
          Length = 534

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 tgctctacttctgccatctt 143
           ||||||||||||||||||||
Sbjct: 47  tgctctacttctgccatctt 28

>ref|XM_939370.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S15 (RIG
           protein) (LOC650283), mRNA
          Length = 512

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 tgctctacttctgccatctt 143
           ||||||||||||||||||||
Sbjct: 41  tgctctacttctgccatctt 22

>ref|XM_496442.2| PREDICTED: Homo sapiens similar to 40S ribosomal protein S15 (RIG
           protein) (LOC440733), mRNA
          Length = 514

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 tgctctacttctgccatctt 143
           ||||||||||||||||||||
Sbjct: 41  tgctctacttctgccatctt 22

>gb|AC092057.2| Homo sapiens chromosome 3 clone RP11-554O1, complete sequence
          Length = 166527

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    tgctctacttctgccatctt 143
              ||||||||||||||||||||
Sbjct: 143639 tgctctacttctgccatctt 143658

>emb|BX323882.7| Zebrafish DNA sequence from clone DKEYP-123G3 in linkage group 12,
             complete sequence
          Length = 127667

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 514   tttggtttaatgtgatcagc 533
             ||||||||||||||||||||
Sbjct: 22461 tttggtttaatgtgatcagc 22442

>gb|AC007969.3| Homo sapiens BAC clone RP11-471A5 from 2, complete sequence
          Length = 162760

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   tgctctacttctgccatctt 143
             ||||||||||||||||||||
Sbjct: 54115 tgctctacttctgccatctt 54096

>gb|AE002665.5| Drosophila melanogaster chromosome 3L, section 83 of 83 of the complete
              sequence
          Length = 491220

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     gcatacaaaatacagtacat 107
              ||||||||||||||||||||
Sbjct: 151047 gcatacaaaatacagtacat 151028

>dbj|AP000646.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-75A1, complete
             sequences
          Length = 125291

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   atcccttggttttgatttgg 240
             ||||||||||||||||||||
Sbjct: 92580 atcccttggttttgatttgg 92561

>dbj|AP000826.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-709H4, complete
             sequence
          Length = 167660

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   atcccttggttttgatttgg 240
             ||||||||||||||||||||
Sbjct: 31501 atcccttggttttgatttgg 31482

>gb|J02984.1|HUMIDB Human insulinoma rig-analog mRNA encoding DNA-binding protein,
           complete cds
          Length = 498

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 tgctctacttctgccatctt 143
           ||||||||||||||||||||
Sbjct: 46  tgctctacttctgccatctt 27


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,090,332
Number of Sequences: 3902068
Number of extensions: 5090332
Number of successful extensions: 86741
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86650
Number of HSP's gapped (non-prelim): 91
length of query: 541
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 518
effective length of database: 17,143,297,704
effective search space: 8880228210672
effective search space used: 8880228210672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)