ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd24g07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY128687.1| Lolium perenne protein phosphatase 2A regulatory A subunit mRNA, partial cds Length = 1160 Score = 484 bits (244), Expect = e-133 Identities = 418/474 (88%), Gaps = 8/474 (1%) Strand = Plus / Minus Query: 142 ggtaaattacatgtactccaaagctggact---aagaatagcttctaaagaacgtgacag 198 |||||||||||||||||||||||||||||| ||||| | ||||| || | | |||||| Sbjct: 947 ggtaaattacatgtactccaaagctggacttagaagaaaatcttctgaaca-cttgacag 889 Query: 199 cagcagcttagttagctagacatcatgatttggtcacaagcctgcagggcctggtttgca 258 ||| ||||||||| |||||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 888 tagc----tagttagcttgacatcatgatttgatcacatgcctgaagggcctggtttgca 833 Query: 259 tagtatcgtacatccacatcagggtcctcgctgagctcgacgaggcatggtttcacagtc 318 ||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 832 tagtatcttacgtccacatcagggtcctcgctgagctcaacgaggcatggtttcaccgtc 773 Query: 319 ttttcagcgacagattgatcaaggattggcacaagcgactgaagaactttcgcgacattg 378 || || ||||||||||||||||||| || |||||||| || ||||||||||| |||||| Sbjct: 772 ttctcgacgacagattgatcaaggatcggtacaagcgattgcagaactttcgcaacattg 713 Query: 379 aacttgatgttcggcactctgtccttcgatgaattgatgacaacagggagaagcttttgg 438 ||||||||||||||||| |||||||| || ||||| || ||||||||||| || ||||| Sbjct: 712 aacttgatgttcggcaccctgtcctttgacgaattaattacaacagggagcagtttttga 653 Query: 439 catgttatttctgcacccatgacaggggctagcaacgaaatggcttggaggatggtcatg 498 |||||||||||||||||||||||||| || || || || || ||||| || ||||||||| Sbjct: 652 catgttatttctgcacccatgacaggcgcaagaaatgagattgcttgcagtatggtcatg 593 Query: 499 cgatacagataatgtgggttgtttatcttctccaacacctgaggaataatatgttgcatt 558 ||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||| Sbjct: 592 cgatacagataatgtgggttgtttatcttctccaatacctgagggattatatgttgcatt 533 Query: 559 gcccactctggaccaaactcctncgccagtcgcttcaagttgtttgcggcagct 612 |||||||||||||||||||||| || | |||||||||||||| || |||||| Sbjct: 532 gcccactctggaccaaactcctctgctaagcgcttcaagttgttcgcagcagct 479
>gb|BT009473.1| Triticum aestivum clone wr1.pk0030.b10:fis, full insert mRNA sequence Length = 2604 Score = 426 bits (215), Expect = e-116 Identities = 287/307 (93%), Gaps = 3/307 (0%) Strand = Plus / Minus Query: 22 acgtgtcccgttgctcaattatacaacattaataacaacaaaaggggaacggagcccatc 81 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2403 acgtgtctcgttgctcaattatacaacattaataacaacaaaaggggaacagagcccatc 2344 Query: 82 cattatcagcatggaagtataggtcggttactgggctagaaagaactcttggactcataa 141 |||||||||||||||||||||||| | ||||||||||||||| |||||| ||||| ||| Sbjct: 2343 cattatcagcatggaagtataggtagattactgggctagaaataactctcagactcttaa 2284 Query: 142 gg-taaattacatgtactccaaagctggactaagaatagcttctaaagaac-gtgacagc 199 || ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | Sbjct: 2283 gggtaaattacatgtactccaa-gctggactaagaatagcttctaaagaaccgtgacgac 2225 Query: 200 agcagcttagttagctagacatcatgatttggtcacaagcctgcagggcctggtttgcat 259 || ||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||| Sbjct: 2224 agtagcttagttagctagacatcatgatctggtcacacgcctgaagggcctggtttgcat 2165 Query: 260 agtatcgtacatccacatcagggtcctcgctgagctcgacgaggcatggtttcacagtct 319 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 2164 agtatcgtacatccacatcagggtcctcgctcagctcgacgaggcatggcttcacagtct 2105 Query: 320 tttcagc 326 | ||||| Sbjct: 2104 tctcagc 2098 Score = 331 bits (167), Expect = 2e-87 Identities = 200/211 (94%) Strand = Plus / Minus Query: 328 acagattgatcaaggattggcacaagcgactgaagaactttcgcgacattgaacttgatg 387 |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 2003 acagattgatcaaggattggtacaagcgactgcagaactttcgcaacattgaacttgatg 1944 Query: 388 ttcggcactctgtccttcgatgaattgatgacaacagggagaagcttttggcatgttatt 447 |||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||| Sbjct: 1943 ttcggcactctgtccttcgaggaattaatgacgacagggagcagcttttggcatgttatt 1884 Query: 448 tctgcacccatgacaggggctagcaacgaaatggcttggaggatggtcatgcgatacaga 507 |||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||| Sbjct: 1883 tctgcacccatgacaggggctagcaatgagatagcttgcaggatggtcatgcgatacaga 1824 Query: 508 taatgtgggttgtttatcttctccaacacct 538 ||||||||||||||||||||||||||||||| Sbjct: 1823 taatgtgggttgtttatcttctccaacacct 1793 Score = 109 bits (55), Expect = 1e-20 Identities = 72/78 (92%) Strand = Plus / Minus Query: 535 acctgaggaataatatgttgcattgcccactctggaccaaactcctncgccagtcgcttc 594 ||||||||||| || |||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct: 1539 acctgaggaattatgtgttgcatagcccactctggaccgaactcctccgccaggcgcttc 1480 Query: 595 aagttgtttgcggcagct 612 |||||||||||||||||| Sbjct: 1479 aagttgtttgcggcagct 1462
>ref|XM_450276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2211 Score = 383 bits (193), Expect = e-103 Identities = 351/404 (86%) Strand = Plus / Minus Query: 208 agttagctagacatcatgatttggtcacaagcctgcagggcctggtttgcatagtatcgt 267 |||||||| |||||||||||||| || || ||||| |||||||||||||||||||||| | Sbjct: 1968 agttagcttgacatcatgatttgatcgcatgcctgaagggcctggtttgcatagtatctt 1909 Query: 268 acatccacatcagggtcctcgctgagctcgacgaggcatggtttcacagtcttttcagcg 327 |||||||||||||||||||| ||||| || ||||||||||||||||| |||| || | Sbjct: 1908 acatccacatcagggtcctcactgagttcaacgaggcatggtttcacgttcttctccaca 1849 Query: 328 acagattgatcaaggattggcacaagcgactgaagaactttcgcgacattgaacttgatg 387 ||||||||||||||||| || | ||| | ||| ||||| ||||| |||||||| |||||| Sbjct: 1848 acagattgatcaaggatcggtataagtgcctgcagaaccttcgcaacattgaatttgatg 1789 Query: 388 ttcggcactctgtccttcgatgaattgatgacaacagggagaagcttttggcatgttatt 447 || |||||||||||||| || ||||| || ||||||||||| |||| ||| || || ||| Sbjct: 1788 tttggcactctgtcctttgaggaattaatcacaacagggagcagctgttgacaagtgatt 1729 Query: 448 tctgcacccatgacaggggctagcaacgaaatggcttggaggatggtcatgcgatacaga 507 || ||||||||||||||||| ||||| ||||| ||||| |||||||||||||| || ||| Sbjct: 1728 tcggcacccatgacaggggccagcaatgaaatagcttgcaggatggtcatgcggtagaga 1669 Query: 508 taatgtgggttgtttatcttctccaacacctgaggaataatatgttgcattgcccactct 567 ||||| ||||||||||||||||||| ||||||||| || ||||| ||||| ||||| ||| Sbjct: 1668 taatgcgggttgtttatcttctccagcacctgagggattatatgctgcatcgcccattct 1609 Query: 568 ggaccaaactcctncgccagtcgcttcaagttgtttgcggcagc 611 ||||||||||||| || || ||||||||||||||||| ||||| Sbjct: 1608 ggaccaaactcctcagctaggcgcttcaagttgtttgcagcagc 1565
>emb|AJ243828.1|OSA243828 Oryza sativa mRNA for protein phosphatase 2A regulatory A subunit (RPA1 gene) Length = 2225 Score = 383 bits (193), Expect = e-103 Identities = 351/404 (86%) Strand = Plus / Minus Query: 208 agttagctagacatcatgatttggtcacaagcctgcagggcctggtttgcatagtatcgt 267 |||||||| |||||||||||||| || || ||||| |||||||||||||||||||||| | Sbjct: 1932 agttagcttgacatcatgatttgatcgcatgcctgaagggcctggtttgcatagtatctt 1873 Query: 268 acatccacatcagggtcctcgctgagctcgacgaggcatggtttcacagtcttttcagcg 327 |||||||||||||||||||| ||||| || ||||||||||||||||| |||| || | Sbjct: 1872 acatccacatcagggtcctcactgagttcaacgaggcatggtttcacgttcttctccaca 1813 Query: 328 acagattgatcaaggattggcacaagcgactgaagaactttcgcgacattgaacttgatg 387 ||||||||||||||||| || | ||| | ||| ||||| ||||| |||||||| |||||| Sbjct: 1812 acagattgatcaaggatcggtataagtgcctgcagaaccttcgcaacattgaatttgatg 1753 Query: 388 ttcggcactctgtccttcgatgaattgatgacaacagggagaagcttttggcatgttatt 447 || |||||||||||||| || ||||| || ||||||||||| |||| ||| || || ||| Sbjct: 1752 tttggcactctgtcctttgaggaattaatcacaacagggagcagctgttgacaagtgatt 1693 Query: 448 tctgcacccatgacaggggctagcaacgaaatggcttggaggatggtcatgcgatacaga 507 || ||||||||||||||||| ||||| ||||| ||||| |||||||||||||| || ||| Sbjct: 1692 tcggcacccatgacaggggccagcaatgaaatagcttgcaggatggtcatgcggtagaga 1633 Query: 508 taatgtgggttgtttatcttctccaacacctgaggaataatatgttgcattgcccactct 567 ||||| ||||||||||||||||||| ||||||||| || ||||| ||||| ||||| ||| Sbjct: 1632 taatgcgggttgtttatcttctccagcacctgagggattatatgctgcatcgcccattct 1573 Query: 568 ggaccaaactcctncgccagtcgcttcaagttgtttgcggcagc 611 ||||||||||||| || || ||||||||||||||||| ||||| Sbjct: 1572 ggaccaaactcctcagctaggcgcttcaagttgtttgcagcagc 1529
>dbj|AK069757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031G02, full insert sequence Length = 2210 Score = 383 bits (193), Expect = e-103 Identities = 351/404 (86%) Strand = Plus / Minus Query: 208 agttagctagacatcatgatttggtcacaagcctgcagggcctggtttgcatagtatcgt 267 |||||||| |||||||||||||| || || ||||| |||||||||||||||||||||| | Sbjct: 1967 agttagcttgacatcatgatttgatcgcatgcctgaagggcctggtttgcatagtatctt 1908 Query: 268 acatccacatcagggtcctcgctgagctcgacgaggcatggtttcacagtcttttcagcg 327 |||||||||||||||||||| ||||| || ||||||||||||||||| |||| || | Sbjct: 1907 acatccacatcagggtcctcactgagttcaacgaggcatggtttcacgttcttctccaca 1848 Query: 328 acagattgatcaaggattggcacaagcgactgaagaactttcgcgacattgaacttgatg 387 ||||||||||||||||| || | ||| | ||| ||||| ||||| |||||||| |||||| Sbjct: 1847 acagattgatcaaggatcggtataagtgcctgcagaaccttcgcaacattgaatttgatg 1788 Query: 388 ttcggcactctgtccttcgatgaattgatgacaacagggagaagcttttggcatgttatt 447 || |||||||||||||| || ||||| || ||||||||||| |||| ||| || || ||| Sbjct: 1787 tttggcactctgtcctttgaggaattaatcacaacagggagcagctgttgacaagtgatt 1728 Query: 448 tctgcacccatgacaggggctagcaacgaaatggcttggaggatggtcatgcgatacaga 507 || ||||||||||||||||| ||||| ||||| ||||| |||||||||||||| || ||| Sbjct: 1727 tcggcacccatgacaggggccagcaatgaaatagcttgcaggatggtcatgcggtagaga 1668 Query: 508 taatgtgggttgtttatcttctccaacacctgaggaataatatgttgcattgcccactct 567 ||||| ||||||||||||||||||| ||||||||| || ||||| ||||| ||||| ||| Sbjct: 1667 taatgcgggttgtttatcttctccagcacctgagggattatatgctgcatcgcccattct 1608 Query: 568 ggaccaaactcctncgccagtcgcttcaagttgtttgcggcagc 611 ||||||||||||| || || ||||||||||||||||| ||||| Sbjct: 1607 ggaccaaactcctcagctaggcgcttcaagttgtttgcagcagc 1564
>dbj|AK059103.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-D03, full insert sequence Length = 1448 Score = 375 bits (189), Expect = e-100 Identities = 350/404 (86%) Strand = Plus / Minus Query: 208 agttagctagacatcatgatttggtcacaagcctgcagggcctggtttgcatagtatcgt 267 |||||||| |||||||||||||| || || ||||| |||||||||||||||||||||| | Sbjct: 1288 agttagcttgacatcatgatttgatcgcatgcctgaagggcctggtttgcatagtatctt 1229 Query: 268 acatccacatcagggtcctcgctgagctcgacgaggcatggtttcacagtcttttcagcg 327 |||||||||||||||||||| ||||| || ||||||||||||||||| |||| || | Sbjct: 1228 acatccacatcagggtcctcactgagttcaacgaggcatggtttcacgttcttctccaca 1169 Query: 328 acagattgatcaaggattggcacaagcgactgaagaactttcgcgacattgaacttgatg 387 ||||||||||||||||| || | ||| | ||| ||||| ||||| |||||||| |||||| Sbjct: 1168 acagattgatcaaggatcggtataagtgcctgcagaaccttcgcaacattgaatttgatg 1109 Query: 388 ttcggcactctgtccttcgatgaattgatgacaacagggagaagcttttggcatgttatt 447 || |||||||||||||| || ||||| | ||||||||||| |||| ||| || || ||| Sbjct: 1108 tttggcactctgtcctttgaggaattaaccacaacagggagcagctgttgacaagtgatt 1049 Query: 448 tctgcacccatgacaggggctagcaacgaaatggcttggaggatggtcatgcgatacaga 507 || ||||||||||||||||| ||||| ||||| ||||| |||||||||||||| || ||| Sbjct: 1048 tcggcacccatgacaggggccagcaatgaaatagcttgcaggatggtcatgcggtagaga 989 Query: 508 taatgtgggttgtttatcttctccaacacctgaggaataatatgttgcattgcccactct 567 ||||| ||||||||||||||||||| ||||||||| || ||||| ||||| ||||| ||| Sbjct: 988 taatgcgggttgtttatcttctccagcacctgagggattatatgctgcatcgcccattct 929 Query: 568 ggaccaaactcctncgccagtcgcttcaagttgtttgcggcagc 611 ||||||||||||| || || ||||||||||||||||| ||||| Sbjct: 928 ggaccaaactcctcagctaggcgcttcaagttgtttgcagcagc 885
>gb|BT018906.1| Zea mays clone EL01T0208F11.d mRNA sequence Length = 2095 Score = 297 bits (150), Expect = 2e-77 Identities = 341/405 (84%) Strand = Plus / Minus Query: 207 tagttagctagacatcatgatttggtcacaagcctgcagggcctggtttgcatagtatcg 266 ||||||||| |||| ||| || ||||| || |||||||| ||||||||||| ||||| | Sbjct: 1903 tagttagcttgacaccatcatctggtcgcacgcctgcagtgcctggtttgcgtagtacct 1844 Query: 267 tacatccacatcagggtcctcgctgagctcgacgaggcatggtttcacagtcttttcagc 326 ||| || || |||||||||||||||||||| |||||||| |||||||| ||||| || | Sbjct: 1843 tacgtcgacgtcagggtcctcgctgagctcaacgaggcacggtttcacggtcttctccac 1784 Query: 327 gacagattgatcaaggattggcacaagcgactgaagaactttcgcgacattgaacttgat 386 |||||||| || ||||| || ||||| ||||| || |||||||| |||||||||||||| Sbjct: 1783 cacagattggtcgaggatcggtacaagtgactgtagtactttcgcaacattgaacttgat 1724 Query: 387 gttcggcactctgtccttcgatgaattgatgacaacagggagaagcttttggcatgttat 446 ||| || || ||||||||||| ||||| ||||| || || || |||||||| || || || Sbjct: 1723 gttgggaaccctgtccttcgaagaattaatgacgactggaagcagcttttgacaggtgat 1664 Query: 447 ttctgcacccatgacaggggctagcaacgaaatggcttggaggatggtcatgcgatacag 506 ||||||||||||||||| |||||||| || || || || || || |||||||| || | Sbjct: 1663 ctctgcacccatgacaggagctagcaaggagattgcctgcagaatcgtcatgcggtataa 1604 Query: 507 ataatgtgggttgtttatcttctccaacacctgaggaataatatgttgcattgcccactc 566 ||| ||||||||||| |||||||||| ||||||||| || ||||| |||||||||||||| Sbjct: 1603 atagtgtgggttgttgatcttctccagcacctgagggattatatgctgcattgcccactc 1544 Query: 567 tggaccaaactcctncgccagtcgcttcaagttgtttgcggcagc 611 |||||||||||| | || || |||||||||||||| |||||||| Sbjct: 1543 tggaccaaactcttctgcaaggcgcttcaagttgttagcggcagc 1499
>gb|BT018352.1| Zea mays clone EL01T0403G07.c mRNA sequence Length = 830 Score = 289 bits (146), Expect = 5e-75 Identities = 340/405 (83%) Strand = Plus / Minus Query: 207 tagttagctagacatcatgatttggtcacaagcctgcagggcctggtttgcatagtatcg 266 ||||||||| |||| ||| |||||| | || ||||||| ||||||||||| ||||| | Sbjct: 613 tagttagcttgacaccatcatttgggcgcacccctgcagtgcctggtttgcgtagtacct 554 Query: 267 tacatccacatcagggtcctcgctgagctcgacgaggcatggtttcacagtcttttcagc 326 ||| || || |||||||||||||||||||| |||||||| |||||||| ||||| || | Sbjct: 553 tacgtcgacgtcagggtcctcgctgagctcaacgaggcacggtttcacggtcttctccac 494 Query: 327 gacagattgatcaaggattggcacaagcgactgaagaactttcgcgacattgaacttgat 386 |||||||| || ||||| || ||||| ||||| || |||||||| |||||||||||||| Sbjct: 493 cacagattggtcgaggatcggtacaagtgactgtagtactttcgcaacattgaacttgat 434 Query: 387 gttcggcactctgtccttcgatgaattgatgacaacagggagaagcttttggcatgttat 446 ||| || || ||||||||||| ||||| ||||| || || || |||||||| || || || Sbjct: 433 gttgggaaccctgtccttcgaagaattaatgacgactggaagcagcttttgacaggtgat 374 Query: 447 ttctgcacccatgacaggggctagcaacgaaatggcttggaggatggtcatgcgatacag 506 ||||||||||||||||| |||||||| || || || || || || |||||||| || | Sbjct: 373 ctctgcacccatgacaggagctagcaaggagattgcctgcagaatcgtcatgcggtataa 314 Query: 507 ataatgtgggttgtttatcttctccaacacctgaggaataatatgttgcattgcccactc 566 ||| ||||||||||| |||||||||| ||||||||| || ||||| |||||||||||||| Sbjct: 313 atagtgtgggttgttgatcttctccagcacctgagggattatatgctgcattgcccactc 254 Query: 567 tggaccaaactcctncgccagtcgcttcaagttgtttgcggcagc 611 |||||||||||| | || || |||||||||||||| |||||||| Sbjct: 253 tggaccaaactcttctgcaaggcgcttcaagttgttagcggcagc 209
>gb|BT016817.1| Zea mays clone Contig650 mRNA sequence Length = 1853 Score = 289 bits (146), Expect = 5e-75 Identities = 340/405 (83%) Strand = Plus / Minus Query: 207 tagttagctagacatcatgatttggtcacaagcctgcagggcctggtttgcatagtatcg 266 ||||||||| |||| ||| || ||||| || |||||||| ||||||||||| ||||| | Sbjct: 1610 tagttagcttgacaccatcatctggtcgcacgcctgcagtgcctggtttgcgtagtacct 1551 Query: 267 tacatccacatcagggtcctcgctgagctcgacgaggcatggtttcacagtcttttcagc 326 ||| || || |||||||||||||||||||| |||||| | |||||||| ||||| || | Sbjct: 1550 tacgtcgacgtcagggtcctcgctgagctcaacgagggacggtttcacggtcttctccac 1491 Query: 327 gacagattgatcaaggattggcacaagcgactgaagaactttcgcgacattgaacttgat 386 |||||||| || ||||| || ||||| ||||| || |||||||| |||||||||||||| Sbjct: 1490 cacagattggtcgaggatcggtacaagtgactgtagtactttcgcaacattgaacttgat 1431 Query: 387 gttcggcactctgtccttcgatgaattgatgacaacagggagaagcttttggcatgttat 446 ||| || || ||||||||||| ||||| ||||| || || || |||||||| || || || Sbjct: 1430 gttgggaaccctgtccttcgaagaattaatgacgactggaagcagcttttgacaggtgat 1371 Query: 447 ttctgcacccatgacaggggctagcaacgaaatggcttggaggatggtcatgcgatacag 506 ||||||||||||||||| |||||||| || || || || || || |||||||| || | Sbjct: 1370 ctctgcacccatgacaggagctagcaaggagattgcctgcagaatcgtcatgcggtataa 1311 Query: 507 ataatgtgggttgtttatcttctccaacacctgaggaataatatgttgcattgcccactc 566 ||| ||||||||||| |||||||||| ||||||||| || ||||| |||||||||||||| Sbjct: 1310 atagtgtgggttgttgatcttctccagcacctgagggattatatgctgcattgcccactc 1251 Query: 567 tggaccaaactcctncgccagtcgcttcaagttgtttgcggcagc 611 |||||||||||| | || || |||||||||||||| |||||||| Sbjct: 1250 tggaccaaactcttctgcaaggcgcttcaagttgttagcggcagc 1206
>gb|BT016833.1| Zea mays clone Contig666 mRNA sequence Length = 1277 Score = 281 bits (142), Expect = 1e-72 Identities = 339/405 (83%) Strand = Plus / Minus Query: 207 tagttagctagacatcatgatttggtcacaagcctgcagggcctggtttgcatagtatcg 266 ||||||||| |||| ||| |||||||| || |||||||| |||||||| || ||||| | Sbjct: 1138 tagttagctcgacaccatcatttggtcgcacgcctgcagcgcctggttcgcgtagtacct 1079 Query: 267 tacatccacatcagggtcctcgctgagctcgacgaggcatggtttcacagtcttttcagc 326 ||||| || |||||||||||||||||||| || |||||||||||||| ||||| || | Sbjct: 1078 cacatcgacgtcagggtcctcgctgagctcaacaaggcatggtttcacggtcttctccac 1019 Query: 327 gacagattgatcaaggattggcacaagcgactgaagaactttcgcgacattgaacttgat 386 |||||||||||| ||||| || ||||| ||||| || ||||| || || ||||||||||| Sbjct: 1018 gacagattgatcgaggatcggtacaagtgactgtagtacttttgcaacgttgaacttgat 959 Query: 387 gttcggcactctgtccttcgatgaattgatgacaacagggagaagcttttggcatgttat 446 ||| || || |||||||| || ||||| ||||| || || || |||||||| || || || Sbjct: 958 gttaggaaccctgtcctttgaagaattaatgacgactggaagcagcttttgacaagtgat 899 Query: 447 ttctgcacccatgacaggggctagcaacgaaatggcttggaggatggtcatgcgatacag 506 |||||||||||||| || |||||||| || || || || || || |||||||| |||| Sbjct: 898 ctctgcacccatgacgggagctagcaaggagatagcctgcagaatcgtcatgcggtacaa 839 Query: 507 ataatgtgggttgtttatcttctccaacacctgaggaataatatgttgcattgcccactc 566 ||| || || ||||| |||||||||| |||||||||||| ||||| |||||||||||||| Sbjct: 838 atagtgcggattgttgatcttctccagcacctgaggaattatatgctgcattgcccactc 779 Query: 567 tggaccaaactcctncgccagtcgcttcaagttgtttgcggcagc 611 |||||| ||||| | ||| || |||||||||||||| |||||||| Sbjct: 778 tggaccgaactcttccgcaaggcgcttcaagttgttggcggcagc 734
>gb|AY103751.1| Zea mays PCO067871 mRNA sequence Length = 2061 Score = 274 bits (138), Expect = 3e-70 Identities = 338/405 (83%) Strand = Plus / Minus Query: 207 tagttagctagacatcatgatttggtcacaagcctgcagggcctggtttgcatagtatcg 266 ||||||||| |||| ||| ||||| || || |||||||| |||||||| || ||||| | Sbjct: 1822 tagttagctcgacaccatcatttgatcgcacgcctgcagcgcctggttcgcgtagtacct 1763 Query: 267 tacatccacatcagggtcctcgctgagctcgacgaggcatggtttcacagtcttttcagc 326 ||||| || |||||||||||||||||||| || |||||||||||||| ||||| || | Sbjct: 1762 cacatcgacgtcagggtcctcgctgagctcaacaaggcatggtttcacggtcttctccac 1703 Query: 327 gacagattgatcaaggattggcacaagcgactgaagaactttcgcgacattgaacttgat 386 |||||||||||| ||||| || ||||| |||| || ||||| || || ||||||||||| Sbjct: 1702 gacagattgatcgaggatcggtacaagtgactttagtacttttgcaacgttgaacttgat 1643 Query: 387 gttcggcactctgtccttcgatgaattgatgacaacagggagaagcttttggcatgttat 446 ||| || || |||||||| || ||||| ||||| || || || |||||||| || || || Sbjct: 1642 gttaggaaccctgtcctttgaagaattaatgacgactggaagcagcttttgacaagtgat 1583 Query: 447 ttctgcacccatgacaggggctagcaacgaaatggcttggaggatggtcatgcgatacag 506 ||||||||||||||||| |||||||| || || || || || || |||||||| |||| Sbjct: 1582 ctctgcacccatgacaggagctagcaaggagatagcctgcagaatcgtcatgcggtacaa 1523 Query: 507 ataatgtgggttgtttatcttctccaacacctgaggaataatatgttgcattgcccactc 566 ||| || || ||||| |||||||||| |||||||||||| ||||| |||||||||||||| Sbjct: 1522 atagtgcggattgttgatcttctccagcacctgaggaattatatgctgcattgcccactc 1463 Query: 567 tggaccaaactcctncgccagtcgcttcaagttgtttgcggcagc 611 |||||| ||||| | ||| || |||||||||||||| |||||||| Sbjct: 1462 tggaccgaactcttccgcaaggcgcttcaagttgttggcggcagc 1418 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 33 tgctcaattatacaacattaataaca 58 |||||||||||||||||||||||||| Sbjct: 2010 tgctcaattatacaacattaataaca 1985
>gb|AY940682.1| Zea mays protein phosphatase 2A regulatory subunit A mRNA, complete cds Length = 2106 Score = 220 bits (111), Expect = 4e-54 Identities = 239/282 (84%) Strand = Plus / Minus Query: 330 agattgatcaaggattggcacaagcgactgaagaactttcgcgacattgaacttgatgtt 389 |||||| || ||||| || ||||| ||||| || |||||||| ||||||||||||||||| Sbjct: 1804 agattggtcgaggatcggtacaagtgactgtagtactttcgcaacattgaacttgatgtt 1745 Query: 390 cggcactctgtccttcgatgaattgatgacaacagggagaagcttttggcatgttatttc 449 || || ||||||||||| ||||| ||||| || || || |||||||| || || ||||| Sbjct: 1744 gggaaccctgtccttcgaagaattaatgacgactggaagcagcttttgacaggtgatttc 1685 Query: 450 tgcacccatgacaggggctagcaacgaaatggcttggaggatggtcatgcgatacagata 509 ||||||||||||||| |||||||| || || || || || || |||||||| || | ||| Sbjct: 1684 tgcacccatgacaggagctagcaaggagattgcctgcagaatcgtcatgcggtataaata 1625 Query: 510 atgtgggttgtttatcttctccaacacctgaggaataatatgttgcattgcccactctgg 569 ||||||||||| |||||||||| ||||||||| || ||||| ||||||||||||||||| Sbjct: 1624 gtgtgggttgttgatcttctccagcacctgagggattatatgctgcattgcccactctgg 1565 Query: 570 accaaactcctncgccagtcgcttcaagttgtttgcggcagc 611 ||||||||| | || || |||||||||||||| |||||||| Sbjct: 1564 accaaactcttctgcaaggcgcttcaagttgttagcggcagc 1523 Score = 103 bits (52), Expect = 7e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 207 tagttagctagacatcatgatttggtcacaagcctgcagggcctggtttgcatagtatcg 266 ||||||||| |||| ||| || ||||| || |||||||| ||||||||||||||||| | Sbjct: 1915 tagttagcttgacaccatcatctggtcgcacgcctgcagtgcctggtttgcatagtacct 1856 Query: 267 tacatccacatcagggtcctcgctgagctcgacgaggcatggtttcac 314 ||| || || |||||||||||||||||||| |||||||| |||||||| Sbjct: 1855 tacgtcgacgtcagggtcctcgctgagctcaacgaggcacggtttcac 1808
>gb|AY111023.1| Zea mays CL9687_1 mRNA sequence Length = 1320 Score = 145 bits (73), Expect = 2e-31 Identities = 142/165 (86%) Strand = Plus / Plus Query: 416 tgacaacagggagaagcttttggcatgttatttctgcacccatgacaggggctagcaacg 475 |||| |||||||| | || ||||||||| || || | |||||||||||| |||||||| | Sbjct: 643 tgacgacagggagcaactgttggcatgtgatatcaggacccatgacaggagctagcaaag 702 Query: 476 aaatggcttggaggatggtcatgcgatacagataatgtgggttgtttatcttctccaaca 535 |||| ||||| | ||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 703 aaatagcttgcaaagtggtcatccgatacagataatgtgggttgtttatcttctccaaaa 762 Query: 536 cctgaggaataatatgttgcattgcccactctggaccaaactcct 580 |||| ||||| ||||||||||| |||||||| || ||||| |||| Sbjct: 763 cctggggaattatatgttgcatcgcccactcagggccaaattcct 807 Score = 125 bits (63), Expect = 2e-25 Identities = 141/167 (84%) Strand = Plus / Plus Query: 226 atttggtcacaagcctgcagggcctggtttgcatagtatcgtacatccacatcagggtcc 285 ||||||||||| ||| | ||||| |||| ||| ||||||| |||||| ||||| |||||| Sbjct: 453 atttggtcacacgcccgaagggcttggtgtgcgtagtatcttacatctacatctgggtcc 512 Query: 286 tcgctgagctcgacgaggcatggtttcacagtcttttcagcgacagattgatcaaggatt 345 || |||||||| || | |||||||||||| ||||| || | |||||||||||||||||| Sbjct: 513 tcactgagctcaactaagcatggtttcactgtcttctccacaacagattgatcaaggatt 572 Query: 346 ggcacaagcgactgaagaactttcgcgacattgaacttgatgttcgg 392 || ||||| || || || ||||| ||||||||||| || |||||||| Sbjct: 573 ggtacaagtgattgcaggactttagcgacattgaatttcatgttcgg 619
>emb|AJ243829.1|OSA243829 Oryza sativa RPA gene for protein phosphatase 2A A subunit, exons 1-12 Length = 6096 Score = 141 bits (71), Expect = 3e-30 Identities = 98/107 (91%) Strand = Plus / Minus Query: 208 agttagctagacatcatgatttggtcacaagcctgcagggcctggtttgcatagtatcgt 267 |||||||| |||||||||||||| || || ||||| |||||||||||||||||||||| | Sbjct: 5496 agttagcttgacatcatgatttgatcgcatgcctgaagggcctggtttgcatagtatctt 5437 Query: 268 acatccacatcagggtcctcgctgagctcgacgaggcatggtttcac 314 |||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct: 5436 acatccacatcagggtcctcactgagttcaacgaggcatggtttcac 5390 Score = 139 bits (70), Expect = 1e-29 Identities = 124/142 (87%) Strand = Plus / Minus Query: 397 ctgtccttcgatgaattgatgacaacagggagaagcttttggcatgttatttctgcaccc 456 |||||||| || ||||| || ||||||||||| |||| ||| || || ||||| |||||| Sbjct: 5130 ctgtcctttgaggaattaatcacaacagggagcagctgttgacaagtgatttcggcaccc 5071 Query: 457 atgacaggggctagcaacgaaatggcttggaggatggtcatgcgatacagataatgtggg 516 ||||||||||| ||||| ||||| ||||| |||||||||||||| || |||||||| ||| Sbjct: 5070 atgacaggggccagcaatgaaatagcttgcaggatggtcatgcggtagagataatgcggg 5011 Query: 517 ttgtttatcttctccaacacct 538 |||||||||||||||| ||||| Sbjct: 5010 ttgtttatcttctccagcacct 4989 Score = 75.8 bits (38), Expect = 2e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 535 acctgaggaataatatgttgcattgcccactctggaccaaactcctncgccagtcgcttc 594 |||||||| || ||||| ||||| ||||| |||||||||||||||| || || |||||| Sbjct: 4293 acctgagggattatatgctgcatcgcccattctggaccaaactcctcagctaggcgcttc 4234 Query: 595 aagttgtttgcggcagc 611 ||||||||||| ||||| Sbjct: 4233 aagttgtttgcagcagc 4217 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 328 acagattgatcaaggattggcacaagcgactgaagaactttcgcgacattgaacttgatg 387 ||||||||||||||||| || | ||| | ||| ||||| ||||| |||||||| |||||| Sbjct: 5279 acagattgatcaaggatcggtataagtgcctgcagaaccttcgcaacattgaatttgatg 5220 Query: 388 ttcggcactctg 399 || ||||||||| Sbjct: 5219 tttggcactctg 5208
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 141 bits (71), Expect = 3e-30 Identities = 98/107 (91%) Strand = Plus / Plus Query: 208 agttagctagacatcatgatttggtcacaagcctgcagggcctggtttgcatagtatcgt 267 |||||||| |||||||||||||| || || ||||| |||||||||||||||||||||| | Sbjct: 3704136 agttagcttgacatcatgatttgatcgcatgcctgaagggcctggtttgcatagtatctt 3704195 Query: 268 acatccacatcagggtcctcgctgagctcgacgaggcatggtttcac 314 |||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct: 3704196 acatccacatcagggtcctcactgagttcaacgaggcatggtttcac 3704242 Score = 139 bits (70), Expect = 1e-29 Identities = 124/142 (87%) Strand = Plus / Plus Query: 397 ctgtccttcgatgaattgatgacaacagggagaagcttttggcatgttatttctgcaccc 456 |||||||| || ||||| || ||||||||||| |||| ||| || || ||||| |||||| Sbjct: 3704502 ctgtcctttgaggaattaatcacaacagggagcagctgttgacaagtgatttcggcaccc 3704561 Query: 457 atgacaggggctagcaacgaaatggcttggaggatggtcatgcgatacagataatgtggg 516 ||||||||||| ||||| ||||| ||||| |||||||||||||| || |||||||| ||| Sbjct: 3704562 atgacaggggccagcaatgaaatagcttgcaggatggtcatgcggtagagataatgcggg 3704621 Query: 517 ttgtttatcttctccaacacct 538 |||||||||||||||| ||||| Sbjct: 3704622 ttgtttatcttctccagcacct 3704643 Score = 75.8 bits (38), Expect = 2e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 535 acctgaggaataatatgttgcattgcccactctggaccaaactcctncgccagtcgcttc 594 |||||||| || ||||| ||||| ||||| |||||||||||||||| || || |||||| Sbjct: 3705330 acctgagggattatatgctgcatcgcccattctggaccaaactcctcagctaggcgcttc 3705389 Query: 595 aagttgtttgcggcagc 611 ||||||||||| ||||| Sbjct: 3705390 aagttgtttgcagcagc 3705406 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 328 acagattgatcaaggattggcacaagcgactgaagaactttcgcgacattgaacttgatg 387 ||||||||||||||||| || | ||| | ||| ||||| ||||| |||||||| |||||| Sbjct: 3704353 acagattgatcaaggatcggtataagtgcctgcagaaccttcgcaacattgaatttgatg 3704412 Query: 388 ttcggcactctg 399 || ||||||||| Sbjct: 3704413 tttggcactctg 3704424
>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1695_A02 Length = 156214 Score = 141 bits (71), Expect = 3e-30 Identities = 98/107 (91%) Strand = Plus / Plus Query: 208 agttagctagacatcatgatttggtcacaagcctgcagggcctggtttgcatagtatcgt 267 |||||||| |||||||||||||| || || ||||| |||||||||||||||||||||| | Sbjct: 112397 agttagcttgacatcatgatttgatcgcatgcctgaagggcctggtttgcatagtatctt 112456 Query: 268 acatccacatcagggtcctcgctgagctcgacgaggcatggtttcac 314 |||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct: 112457 acatccacatcagggtcctcactgagttcaacgaggcatggtttcac 112503 Score = 139 bits (70), Expect = 1e-29 Identities = 124/142 (87%) Strand = Plus / Plus Query: 397 ctgtccttcgatgaattgatgacaacagggagaagcttttggcatgttatttctgcaccc 456 |||||||| || ||||| || ||||||||||| |||| ||| || || ||||| |||||| Sbjct: 112763 ctgtcctttgaggaattaatcacaacagggagcagctgttgacaagtgatttcggcaccc 112822 Query: 457 atgacaggggctagcaacgaaatggcttggaggatggtcatgcgatacagataatgtggg 516 ||||||||||| ||||| ||||| ||||| |||||||||||||| || |||||||| ||| Sbjct: 112823 atgacaggggccagcaatgaaatagcttgcaggatggtcatgcggtagagataatgcggg 112882 Query: 517 ttgtttatcttctccaacacct 538 |||||||||||||||| ||||| Sbjct: 112883 ttgtttatcttctccagcacct 112904 Score = 75.8 bits (38), Expect = 2e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 535 acctgaggaataatatgttgcattgcccactctggaccaaactcctncgccagtcgcttc 594 |||||||| || ||||| ||||| ||||| |||||||||||||||| || || |||||| Sbjct: 113591 acctgagggattatatgctgcatcgcccattctggaccaaactcctcagctaggcgcttc 113650 Query: 595 aagttgtttgcggcagc 611 ||||||||||| ||||| Sbjct: 113651 aagttgtttgcagcagc 113667 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 328 acagattgatcaaggattggcacaagcgactgaagaactttcgcgacattgaacttgatg 387 ||||||||||||||||| || | ||| | ||| ||||| ||||| |||||||| |||||| Sbjct: 112614 acagattgatcaaggatcggtataagtgcctgcagaaccttcgcaacattgaatttgatg 112673 Query: 388 ttcggcactctg 399 || ||||||||| Sbjct: 112674 tttggcactctg 112685
>dbj|AP005553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_H10 Length = 101054 Score = 141 bits (71), Expect = 3e-30 Identities = 98/107 (91%) Strand = Plus / Plus Query: 208 agttagctagacatcatgatttggtcacaagcctgcagggcctggtttgcatagtatcgt 267 |||||||| |||||||||||||| || || ||||| |||||||||||||||||||||| | Sbjct: 11438 agttagcttgacatcatgatttgatcgcatgcctgaagggcctggtttgcatagtatctt 11497 Query: 268 acatccacatcagggtcctcgctgagctcgacgaggcatggtttcac 314 |||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct: 11498 acatccacatcagggtcctcactgagttcaacgaggcatggtttcac 11544 Score = 139 bits (70), Expect = 1e-29 Identities = 124/142 (87%) Strand = Plus / Plus Query: 397 ctgtccttcgatgaattgatgacaacagggagaagcttttggcatgttatttctgcaccc 456 |||||||| || ||||| || ||||||||||| |||| ||| || || ||||| |||||| Sbjct: 11804 ctgtcctttgaggaattaatcacaacagggagcagctgttgacaagtgatttcggcaccc 11863 Query: 457 atgacaggggctagcaacgaaatggcttggaggatggtcatgcgatacagataatgtggg 516 ||||||||||| ||||| ||||| ||||| |||||||||||||| || |||||||| ||| Sbjct: 11864 atgacaggggccagcaatgaaatagcttgcaggatggtcatgcggtagagataatgcggg 11923 Query: 517 ttgtttatcttctccaacacct 538 |||||||||||||||| ||||| Sbjct: 11924 ttgtttatcttctccagcacct 11945 Score = 75.8 bits (38), Expect = 2e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 535 acctgaggaataatatgttgcattgcccactctggaccaaactcctncgccagtcgcttc 594 |||||||| || ||||| ||||| ||||| |||||||||||||||| || || |||||| Sbjct: 12632 acctgagggattatatgctgcatcgcccattctggaccaaactcctcagctaggcgcttc 12691 Query: 595 aagttgtttgcggcagc 611 ||||||||||| ||||| Sbjct: 12692 aagttgtttgcagcagc 12708 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 328 acagattgatcaaggattggcacaagcgactgaagaactttcgcgacattgaacttgatg 387 ||||||||||||||||| || | ||| | ||| ||||| ||||| |||||||| |||||| Sbjct: 11655 acagattgatcaaggatcggtataagtgcctgcagaaccttcgcaacattgaatttgatg 11714 Query: 388 ttcggcactctg 399 || ||||||||| Sbjct: 11715 tttggcactctg 11726
>ref|NM_101203.3| Arabidopsis thaliana PDF2; protein phosphatase type 2A regulator AT1G13320 (PDF2) transcript variant AT1G13320.1 mRNA, complete cds Length = 2033 Score = 73.8 bits (37), Expect = 6e-10 Identities = 99/120 (82%) Strand = Plus / Minus Query: 493 gtcatgcgatacagataatgtgggttgtttatcttctccaacacctgaggaataatatgt 552 ||||| ||||| ||||| ||||||||||| ||| |||| | |||||||||| ||||| Sbjct: 1570 gtcatccgatatagatagtgtgggttgttaatcatctctagaacctgaggaactatatgc 1511 Query: 553 tgcattgcccactctggaccaaactcctncgccagtcgcttcaagttgtttgcggcagct 612 ||||||||||| || ||||||||||| | || || ||||||| |||||||| |||||| Sbjct: 1510 tgcattgcccattcaggaccaaactcttcagcaagacgcttcagattgtttgcagcagct 1451
>ref|NM_001035958.1| Arabidopsis thaliana PDF2; protein phosphatase type 2A regulator AT1G13320 (PDF2) transcript variant AT1G13320.2 mRNA, complete cds Length = 2073 Score = 73.8 bits (37), Expect = 6e-10 Identities = 99/120 (82%) Strand = Plus / Minus Query: 493 gtcatgcgatacagataatgtgggttgtttatcttctccaacacctgaggaataatatgt 552 ||||| ||||| ||||| ||||||||||| ||| |||| | |||||||||| ||||| Sbjct: 1571 gtcatccgatatagatagtgtgggttgttaatcatctctagaacctgaggaactatatgc 1512 Query: 553 tgcattgcccactctggaccaaactcctncgccagtcgcttcaagttgtttgcggcagct 612 ||||||||||| || ||||||||||| | || || ||||||| |||||||| |||||| Sbjct: 1511 tgcattgcccattcaggaccaaactcttcagcaagacgcttcagattgtttgcagcagct 1452
>emb|X82003.1|AT65KPDF2 A.thaliana mRNA for 65kDa regulatory subunit of protein phosphatase 2A Length = 1685 Score = 73.8 bits (37), Expect = 6e-10 Identities = 99/120 (82%) Strand = Plus / Minus Query: 493 gtcatgcgatacagataatgtgggttgtttatcttctccaacacctgaggaataatatgt 552 ||||| ||||| ||||| ||||||||||| ||| |||| | |||||||||| ||||| Sbjct: 1244 gtcatccgatatagatagtgtgggttgttaatcatctctagaacctgaggaactatatgc 1185 Query: 553 tgcattgcccactctggaccaaactcctncgccagtcgcttcaagttgtttgcggcagct 612 ||||||||||| || ||||||||||| | || || ||||||| |||||||| |||||| Sbjct: 1184 tgcattgcccattcaggaccaaactcttcagcaagacgcttcagattgtttgcagcagct 1125
>gb|AY099760.1| Arabidopsis thaliana protein phosphatase 2A regulatory subunit, putative (At1g13320) mRNA, complete cds Length = 1996 Score = 73.8 bits (37), Expect = 6e-10 Identities = 99/120 (82%) Strand = Plus / Minus Query: 493 gtcatgcgatacagataatgtgggttgtttatcttctccaacacctgaggaataatatgt 552 ||||| ||||| ||||| ||||||||||| ||| |||| | |||||||||| ||||| Sbjct: 1570 gtcatccgatatagatagtgtgggttgttaatcatctctagaacctgaggaactatatgc 1511 Query: 553 tgcattgcccactctggaccaaactcctncgccagtcgcttcaagttgtttgcggcagct 612 ||||||||||| || ||||||||||| | || || ||||||| |||||||| |||||| Sbjct: 1510 tgcattgcccattcaggaccaaactcttcagcaagacgcttcagattgtttgcagcagct 1451
>emb|BX818278.1|CNS0AEDN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL70ZB02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 662 Score = 73.8 bits (37), Expect = 6e-10 Identities = 99/120 (82%) Strand = Plus / Minus Query: 493 gtcatgcgatacagataatgtgggttgtttatcttctccaacacctgaggaataatatgt 552 ||||| ||||| ||||| ||||||||||| ||| |||| | |||||||||| ||||| Sbjct: 240 gtcatccgatatagatagtgtgggttgttaatcatctctagaacctgaggaactatatgc 181 Query: 553 tgcattgcccactctggaccaaactcctncgccagtcgcttcaagttgtttgcggcagct 612 ||||||||||| || ||||||||||| | || || ||||||| |||||||| |||||| Sbjct: 180 tgcattgcccattcaggaccaaactcttcagcaagacgcttcagattgtttgcagcagct 121
>emb|BX815351.1|CNS0AE48 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS54ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1957 Score = 73.8 bits (37), Expect = 6e-10 Identities = 99/120 (82%) Strand = Plus / Minus Query: 493 gtcatgcgatacagataatgtgggttgtttatcttctccaacacctgaggaataatatgt 552 ||||| ||||| ||||| ||||||||||| ||| |||| | |||||||||| ||||| Sbjct: 1543 gtcatccgatatagatagtgtgggttgttaatcatctctagaacctgaggaactatatgc 1484 Query: 553 tgcattgcccactctggaccaaactcctncgccagtcgcttcaagttgtttgcggcagct 612 ||||||||||| || ||||||||||| | || || ||||||| |||||||| |||||| Sbjct: 1483 tgcattgcccattcaggaccaaactcttcagcaagacgcttcagattgtttgcagcagct 1424
>gb|BT002601.1| Arabidopsis thaliana protein phosphatase 2A regulatory subunit, putative (At1g13320) mRNA, complete cds Length = 1794 Score = 73.8 bits (37), Expect = 6e-10 Identities = 99/120 (82%) Strand = Plus / Minus Query: 493 gtcatgcgatacagataatgtgggttgtttatcttctccaacacctgaggaataatatgt 552 ||||| ||||| ||||| ||||||||||| ||| |||| | |||||||||| ||||| Sbjct: 1481 gtcatccgatatagatagtgtgggttgttaatcatctctagaacctgaggaactatatgc 1422 Query: 553 tgcattgcccactctggaccaaactcctncgccagtcgcttcaagttgtttgcggcagct 612 ||||||||||| || ||||||||||| | || || ||||||| |||||||| |||||| Sbjct: 1421 tgcattgcccattcaggaccaaactcttcagcaagacgcttcagattgtttgcagcagct 1362
>emb|X97913.1|NTPP2A N.tabacum mRNA for protein phosphatase 2A, 65kD regulatory subunit Length = 2153 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 535 acctgaggaataatatgttgcattgcccactctggaccaaactcct 580 ||||||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 1543 acctgaggaattatatgctgcattgcccactctggaccaaattcct 1498
>emb|BX816767.1|CNS0AEGX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZE01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 526 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 493 gtcatgcgatacagataatgtgggttgtttatcttctccaacacctgaggaataatatgt 552 ||||| ||||| ||||| ||||||||||| ||| |||| | |||||||||| ||||| Sbjct: 99 gtcatccgatatagatagtgtgggttgttaatcatctctagaacctgaggaactatatgc 40 Query: 553 tgcattgcccactctggaccaaactc 578 ||||||||||| || ||||||||||| Sbjct: 39 tgcattgcccattcaggaccaaactc 14
>gb|AF196286.1|AF196286 Medicago sativa subsp. x varia Ser/Thr specific protein phosphatase 2A A regulatory subunit alpha isoform mRNA, complete cds Length = 2146 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 454 cccatgacaggggctagcaacgaaatggcttggaggatggtcatgcgatacagataatgt 513 ||||| ||||||||||||| || || || | || |||||||| ||||||| ||| ||| Sbjct: 1690 cccattacaggggctagcagggagatagcacgaagaatggtcatccgatacaaatagtgt 1631 Query: 514 gggttgtttatcttctccaacacctgaggaataatatgttgcattgcccactctggacca 573 || ||| | ||| |||||| ||||||||||| || || ||||| |||||||| |||||| Sbjct: 1630 ggattggtaatcatctccagaacctgaggaatgatgtgctgcatagcccactcaggacca 1571 Query: 574 aactc 578 ||||| Sbjct: 1570 aactc 1566
>emb|AJ131045.1|CAR131045 Cicer arietinum mRNA for protein phosphatase Length = 1776 Score = 63.9 bits (32), Expect = 6e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 460 acaggggctagcaacgaaatggcttggaggatggtcatgcgatacagataatgtgggttg 519 ||||| ||||||| ||||| || || | ||| ||||| ||||||||||||||||| | Sbjct: 1368 acaggagctagcagagaaattgcgtgtaagatcgtcattcgatacagataatgtggatca 1309 Query: 520 tttatcttctccaacacctgaggaataatatgttgcattgcccactctggaccaaa 575 || ||| | ||||| ||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 1308 ttaatcatgtccaaaacctggggaataatgtgctgcattgcccattctggtccaaa 1253
>emb|Z25888.1|PSPP2A65K P.sativum mRNA For phosphoprotein phosphatase 2A 65 kDa regulatory subunit Length = 1367 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 493 gtcatgcgatacagataatgtgggttgtttatcttctccaacacctgaggaataatatgt 552 ||||| |||||||| |||||||| | || ||| | ||||| || || ||||||||||| Sbjct: 905 gtcatccgatacaggtaatgtggatcattaatcatgtccaaaacttggggaataatatgc 846 Query: 553 tgcattgcccactctggaccaaa 575 ||||||||||||||||| ||||| Sbjct: 845 tgcattgcccactctggtccaaa 823
>gb|AF196287.1|AF196287 Medicago sativa subsp. x varia Ser/Thr specific protein phosphatase 2A A regulatory subunit beta isoform mRNA, complete cds Length = 2163 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 493 gtcatgcgatacagataatgtgggttgtttatcttctccaacacctgaggaataatatgt 552 ||||| ||||||||||||||||| | || | | | ||||| ||||| |||||||| ||| Sbjct: 1648 gtcattcgatacagataatgtggatcattaaccatgtccaaaacctggggaataatgtgt 1589 Query: 553 tgcattgcccactctggaccaaa 575 ||||||||||| ||||| ||||| Sbjct: 1588 tgcattgcccattctggtccaaa 1566
>ref|NM_113479.2| Arabidopsis thaliana PDF1; protein phosphatase type 2A regulator AT3G25800 (PDF1) transcript variant AT3G25800.1 mRNA, complete cds Length = 2087 Score = 54.0 bits (27), Expect = 6e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 490 atggtcatgcgatacagataatgtgggttgtttatcttctccaacacctgaggaataata 549 |||||||| || || ||||| || |||||||| | | |||| | |||||||||| ||| Sbjct: 1583 atggtcattcggtagagatagtgagggttgttaaccatctcaagaacctgaggaactata 1524 Query: 550 tgttgcattgcccactctggaccaaactcct 580 |||||||||||||| || |||||||| |||| Sbjct: 1523 tgttgcattgcccattcaggaccaaattcct 1493
>ref|NM_001035692.1| Arabidopsis thaliana PDF1; protein phosphatase type 2A regulator AT3G25800 (PDF1) transcript variant AT3G25800.2 mRNA, complete cds Length = 2099 Score = 54.0 bits (27), Expect = 6e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 490 atggtcatgcgatacagataatgtgggttgtttatcttctccaacacctgaggaataata 549 |||||||| || || ||||| || |||||||| | | |||| | |||||||||| ||| Sbjct: 1583 atggtcattcggtagagatagtgagggttgttaaccatctcaagaacctgaggaactata 1524 Query: 550 tgttgcattgcccactctggaccaaactcct 580 |||||||||||||| || |||||||| |||| Sbjct: 1523 tgttgcattgcccattcaggaccaaattcct 1493
>emb|X82002.1|AT65KPDF1 A.thaliana mRNA for 65 kDa regulatory subunit of protein phosphatase 2A Length = 1842 Score = 54.0 bits (27), Expect = 6e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 490 atggtcatgcgatacagataatgtgggttgtttatcttctccaacacctgaggaataata 549 |||||||| || || ||||| || |||||||| | | |||| | |||||||||| ||| Sbjct: 1517 atggtcattcggtagagatagtgagggttgttaaccatctcaagaacctgaggaactata 1458 Query: 550 tgttgcattgcccactctggaccaaactcct 580 |||||||||||||| || |||||||| |||| Sbjct: 1457 tgttgcattgcccattcaggaccaaattcct 1427
>gb|BT008356.1| Arabidopsis thaliana At3g25800 gene, complete cds Length = 1764 Score = 54.0 bits (27), Expect = 6e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 490 atggtcatgcgatacagataatgtgggttgtttatcttctccaacacctgaggaataata 549 |||||||| || || ||||| || |||||||| | | |||| | |||||||||| ||| Sbjct: 1484 atggtcattcggtagagatagtgagggttgttaaccatctcaagaacctgaggaactata 1425 Query: 550 tgttgcattgcccactctggaccaaactcct 580 |||||||||||||| || |||||||| |||| Sbjct: 1424 tgttgcattgcccattcaggaccaaattcct 1394
>gb|AC011810.8|AC011810 Arabidopsis thaliana chromosome I BAC T6J4 genomic sequence, complete sequence Length = 103157 Score = 54.0 bits (27), Expect = 6e-04 Identities = 65/78 (83%) Strand = Plus / Plus Query: 535 acctgaggaataatatgttgcattgcccactctggaccaaactcctncgccagtcgcttc 594 |||||||||| ||||| ||||||||||| || ||||||||||| | || || |||||| Sbjct: 42431 acctgaggaactatatgctgcattgcccattcaggaccaaactcttcagcaagacgcttc 42490 Query: 595 aagttgtttgcggcagct 612 | |||||||| |||||| Sbjct: 42491 agattgtttgcagcagct 42508
>gb|BT002488.1| Arabidopsis thaliana protein phosphatase 2A 65 kDa regulatory subunit (At3g25800) mRNA, complete cds Length = 2061 Score = 54.0 bits (27), Expect = 6e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 490 atggtcatgcgatacagataatgtgggttgtttatcttctccaacacctgaggaataata 549 |||||||| || || ||||| || |||||||| | | |||| | |||||||||| ||| Sbjct: 1583 atggtcattcggtagagatagtgagggttgttaaccatctcaagaacctgaggaactata 1524 Query: 550 tgttgcattgcccactctggaccaaactcct 580 |||||||||||||| || |||||||| |||| Sbjct: 1523 tgttgcattgcccattcaggaccaaattcct 1493
>dbj|AB028607.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K13N2 Length = 77483 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 535 acctgaggaataatatgttgcattgcccactctggaccaaactcct 580 |||||||||| ||||||||||||||||| || |||||||| |||| Sbjct: 60094 acctgaggaactatatgttgcattgcccattcaggaccaaattcct 60139
>ref|NM_102360.2| Arabidopsis thaliana RCN1 (ROOTS CURL IN NPA); protein phosphatase type 2A regulator AT1G25490 (RCN1) mRNA, complete cds Length = 2086 Score = 50.1 bits (25), Expect = 0.009 Identities = 51/60 (85%) Strand = Plus / Minus Query: 553 tgcattgcccactctggaccaaactcctncgccagtcgcttcaagttgtttgcggcagct 612 ||||||||||| || ||||||||||||| || || ||||| | ||||||||| |||||| Sbjct: 1538 tgcattgcccattcaggaccaaactcctctgcgaggcgctttaggttgtttgctgcagct 1479
>gb|BT000108.1| Arabidopsis thaliana phosphoprotein phosphatase 2A regulatory subunit A (At1g25490) mRNA, complete cds Length = 1861 Score = 50.1 bits (25), Expect = 0.009 Identities = 51/60 (85%) Strand = Plus / Minus Query: 553 tgcattgcccactctggaccaaactcctncgccagtcgcttcaagttgtttgcggcagct 612 ||||||||||| || ||||||||||||| || || ||||| | ||||||||| |||||| Sbjct: 1421 tgcattgcccattcaggaccaaactcctctgcgaggcgctttaggttgtttgctgcagct 1362
>emb|X82001.1|AT65KRP2A A.thaliana gene for 65 kDa regulatory subunit of protein phosphatase 2A Length = 4705 Score = 50.1 bits (25), Expect = 0.009 Identities = 51/60 (85%) Strand = Plus / Minus Query: 553 tgcattgcccactctggaccaaactcctncgccagtcgcttcaagttgtttgcggcagct 612 ||||||||||| || ||||||||||||| || || ||||| | ||||||||| |||||| Sbjct: 2959 tgcattgcccattcaggaccaaactcctctgcgaggcgctttaggttgtttgctgcagct 2900
>gb|AY120757.1| Arabidopsis thaliana phosphoprotein phosphatase 2A regulatory subunit A (At1g25490) mRNA, complete cds Length = 2035 Score = 50.1 bits (25), Expect = 0.009 Identities = 51/60 (85%) Strand = Plus / Minus Query: 553 tgcattgcccactctggaccaaactcctncgccagtcgcttcaagttgtttgcggcagct 612 ||||||||||| || ||||||||||||| || || ||||| | ||||||||| |||||| Sbjct: 1538 tgcattgcccattcaggaccaaactcctctgcgaggcgctttaggttgtttgctgcagct 1479
>dbj|AK222057.1| Arabidopsis thaliana mRNA for phosphoprotein phosphatase 2A regulatory subunit A, partial cds, clone: RAFL22-79-F11 Length = 1136 Score = 50.1 bits (25), Expect = 0.009 Identities = 51/60 (85%) Strand = Plus / Minus Query: 553 tgcattgcccactctggaccaaactcctncgccagtcgcttcaagttgtttgcggcagct 612 ||||||||||| || ||||||||||||| || || ||||| | ||||||||| |||||| Sbjct: 629 tgcattgcccattcaggaccaaactcctctgcgaggcgctttaggttgtttgctgcagct 570
>gb|AC079281.4|AC079281 Arabidopsis thaliana chromosome 1 BAC F2J7 genomic sequence, complete sequence Length = 102540 Score = 50.1 bits (25), Expect = 0.009 Identities = 51/60 (85%) Strand = Plus / Plus Query: 553 tgcattgcccactctggaccaaactcctncgccagtcgcttcaagttgtttgcggcagct 612 ||||||||||| || ||||||||||||| || || ||||| | ||||||||| |||||| Sbjct: 47059 tgcattgcccattcaggaccaaactcctctgcgaggcgctttaggttgtttgctgcagct 47118
>gb|DQ323045.1| Phaseolus vulgaris clone BAC-71F18, complete sequence Length = 157468 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 475 gaaatggcttggaggatggtcatgcgatacagataatgtgg 515 ||||| ||||| ||||| ||||| ||||||||||||||||| Sbjct: 147485 gaaattgcttgaaggatcgtcatccgatacagataatgtgg 147445 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 535 acctgaggaataatatgttgcattgccca 563 ||||| |||||||| |||||||||||||| Sbjct: 147058 acctggggaataatgtgttgcattgccca 147030
>gb|U21557.1|ATU21557 Arabidopsis thaliana phosphoprotein phosphatase 2A regulatory subunit A (RCN1) mRNA, complete cds Length = 1993 Score = 50.1 bits (25), Expect = 0.009 Identities = 51/60 (85%) Strand = Plus / Minus Query: 553 tgcattgcccactctggaccaaactcctncgccagtcgcttcaagttgtttgcggcagct 612 ||||||||||| || ||||||||||||| || || ||||| | ||||||||| |||||| Sbjct: 1499 tgcattgcccattcaggaccaaactcctctgcgaggcgctttaggttgtttgctgcagct 1440
>gb|U27299.1|ATU27299 Arabidopsis thaliana serine/threonine protein phosphatase type 2A regulatory subunit A mRNA, complete cds Length = 2020 Score = 50.1 bits (25), Expect = 0.009 Identities = 51/60 (85%) Strand = Plus / Minus Query: 553 tgcattgcccactctggaccaaactcctncgccagtcgcttcaagttgtttgcggcagct 612 ||||||||||| || ||||||||||||| || || ||||| | ||||||||| |||||| Sbjct: 1521 tgcattgcccattcaggaccaaactcctctgcgaggcgctttaggttgtttgctgcagct 1462
>emb|AL354769.17| Human DNA sequence from clone RP11-417G14 on chromosome X, complete sequence Length = 113526 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 acaacattaataacaacaaaa 64 ||||||||||||||||||||| Sbjct: 6357 acaacattaataacaacaaaa 6337
>gb|AC130888.2| Homo sapiens 3 BAC RP11-77P16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114687 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 acaacattaataacaacaaaa 64 ||||||||||||||||||||| Sbjct: 93522 acaacattaataacaacaaaa 93502
>dbj|AK031299.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030404K05 product:hypothetical Zn-finger, CCHC type/PAP/25A-associated domain/PAP/25A core domain/Zinc finger CCHC-type profile/Zn-finger, C2H2 type containing protein, full insert sequence Length = 3282 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 aacattaataacaacaaaagg 66 ||||||||||||||||||||| Sbjct: 3219 aacattaataacaacaaaagg 3239
>gb|AF393650.1| Lactococcus lactis transcriptional repressor BusR (busR) gene, complete cds Length = 849 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 agctggactaagaatagcttctaaa 187 ||||||||||| ||||||||||||| Sbjct: 54 agctggactaaaaatagcttctaaa 30
>gb|AC102448.15| Mus musculus chromosome 3, clone RP24-209L5, complete sequence Length = 159371 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 500 gatacagataatgtgggttgtttat 524 |||||||| |||||||||||||||| Sbjct: 47175 gatacagaaaatgtgggttgtttat 47199
>gb|AC009430.2|AC009430 Homo sapiens, clone RP11-45O17, complete sequence Length = 156454 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 acaacattaataacaacaaaa 64 ||||||||||||||||||||| Sbjct: 12198 acaacattaataacaacaaaa 12218
>emb|CT573097.3| RP43-080H03, complete sequence Length = 174747 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 acaacattaataacaacaaaa 64 ||||||||||||||||||||| Sbjct: 111744 acaacattaataacaacaaaa 111764
>dbj|AP006422.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT33E11, TM0310b, complete sequence Length = 93261 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 475 gaaatggcttggaggatggtcatgcgatacagataatgtgg 515 ||||| ||||| || || ||||| ||||||||||||||||| Sbjct: 76357 gaaattgcttgtagaattgtcattcgatacagataatgtgg 76317 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 535 acctgaggaataatatgttgcattgcccactctggaccaaa 575 ||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 75848 acctggggaataatgtgctgcattgcccaatctggtccaaa 75808
>emb|AL626783.16| Mouse DNA sequence from clone RP23-406B13 on chromosome 4, complete sequence Length = 179370 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 aacattaataacaacaaaagg 66 ||||||||||||||||||||| Sbjct: 42501 aacattaataacaacaaaagg 42521
>gb|AC164074.5| Mus musculus chromosome 5, clone RP23-69E3, complete sequence Length = 210871 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 aattgatgacaacagggaga 429 |||||||||||||||||||| Sbjct: 161719 aattgatgacaacagggaga 161700
>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome Length = 1838554 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cttcgatgaattgatgacaa 421 |||||||||||||||||||| Sbjct: 1267175 cttcgatgaattgatgacaa 1267156
>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome Length = 1899877 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cttcgatgaattgatgacaa 421 |||||||||||||||||||| Sbjct: 1315588 cttcgatgaattgatgacaa 1315569
>gb|AE006591.1| Streptococcus pyogenes M1 GAS, section 120 of 167 of the complete genome Length = 13752 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cttcgatgaattgatgacaa 421 |||||||||||||||||||| Sbjct: 1490 cttcgatgaattgatgacaa 1471
>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome Length = 1937111 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cttcgatgaattgatgacaa 421 |||||||||||||||||||| Sbjct: 1344187 cttcgatgaattgatgacaa 1344168
>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome Length = 1860355 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cttcgatgaattgatgacaa 421 |||||||||||||||||||| Sbjct: 1285556 cttcgatgaattgatgacaa 1285537
>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome Length = 1928252 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cttcgatgaattgatgacaa 421 |||||||||||||||||||| Sbjct: 1361025 cttcgatgaattgatgacaa 1361006
>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome Length = 1836467 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cttcgatgaattgatgacaa 421 |||||||||||||||||||| Sbjct: 1261714 cttcgatgaattgatgacaa 1261695
>gb|AC145959.3| Gallus gallus chromosome UNK clone CH261-17M10, complete sequence Length = 183075 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 atttggtcacaagcctgcagggcc 249 |||||||||||||| ||||||||| Sbjct: 84342 atttggtcacaagcatgcagggcc 84365
>emb|CR926467.10| Zebrafish DNA sequence from clone DKEYP-20G2 in linkage group 5, complete sequence Length = 153796 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 caacattaataacaacaaaa 64 |||||||||||||||||||| Sbjct: 93721 caacattaataacaacaaaa 93702
>gb|AC117253.3| Mus musculus BAC clone RP24-405A12 from chromosome 19, complete sequence Length = 142903 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 acattaataacaacaaaagg 66 |||||||||||||||||||| Sbjct: 84236 acattaataacaacaaaagg 84255
>gb|AC113004.13| Mus musculus chromosome 5, clone RP23-250M13, complete sequence Length = 198820 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 aattgatgacaacagggaga 429 |||||||||||||||||||| Sbjct: 161717 aattgatgacaacagggaga 161698
>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome Length = 1897573 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cttcgatgaattgatgacaa 421 |||||||||||||||||||| Sbjct: 1336800 cttcgatgaattgatgacaa 1336781
>gb|DQ366741.1| Uncultured Prochlorococcus marinus clone HOT0M-8C8 genomic sequence Length = 20952 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 taataacaacaaaaggggaa 70 |||||||||||||||||||| Sbjct: 109 taataacaacaaaaggggaa 90
>emb|X98130.1|AT81KBGEN Arabidopsis thaliana 81kb genomic sequence Length = 81493 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 cattaataacaacaaaaggg 67 |||||||||||||||||||| Sbjct: 59973 cattaataacaacaaaaggg 59992
>emb|BX323842.8| Zebrafish DNA sequence from clone CH211-1M7, complete sequence Length = 162929 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 cagggcctggtttgcatagt 262 |||||||||||||||||||| Sbjct: 50700 cagggcctggtttgcatagt 50681
>gb|AE010073.1| Streptococcus pyogenes strain MGAS8232, section 121 of 173 of the complete genome Length = 14294 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cttcgatgaattgatgacaa 421 |||||||||||||||||||| Sbjct: 1489 cttcgatgaattgatgacaa 1470
>ref|XM_624877.1| PREDICTED: Apis mellifera similar to CG14967-PA (LOC552502), mRNA Length = 6096 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 418 acaacagggagaagcttttggcatgtta 445 |||||||||||||||| |||| |||||| Sbjct: 4134 acaacagggagaagctgttggtatgtta 4161
>gb|AC016725.5| Homo sapiens BAC clone RP11-341H1 from 2, complete sequence Length = 164180 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ttatacaacattaataacaa 59 |||||||||||||||||||| Sbjct: 18181 ttatacaacattaataacaa 18200
>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome Length = 1900521 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cttcgatgaattgatgacaa 421 |||||||||||||||||||| Sbjct: 1297434 cttcgatgaattgatgacaa 1297415
>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome Length = 1894275 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 cttcgatgaattgatgacaa 421 |||||||||||||||||||| Sbjct: 599451 cttcgatgaattgatgacaa 599470
>dbj|AB026648.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLJ15 Length = 43481 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 cattaataacaacaaaaggg 67 |||||||||||||||||||| Sbjct: 17735 cattaataacaacaaaaggg 17754
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 acattaataacaacaaaaggggaa 70 |||||||||||| ||||||||||| Sbjct: 180426 acattaataacaccaaaaggggaa 180449
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 attatacaacattaataaca 58 |||||||||||||||||||| Sbjct: 4558 attatacaacattaataaca 4577
>gb|AC099701.4| Mus musculus chromosome 7, clone RP23-184F6, complete sequence Length = 226167 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 aacattaataacaacaaaag 65 |||||||||||||||||||| Sbjct: 198669 aacattaataacaacaaaag 198688
>emb|AL669828.13| Mouse DNA sequence from clone RP23-163J20 on chromosome 2, complete sequence Length = 248940 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 catgttatttctgcacccat 458 |||||||||||||||||||| Sbjct: 28382 catgttatttctgcacccat 28363 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,986,376 Number of Sequences: 3902068 Number of extensions: 4986376 Number of successful extensions: 95890 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95587 Number of HSP's gapped (non-prelim): 298 length of query: 612 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 589 effective length of database: 17,143,297,704 effective search space: 10097402347656 effective search space used: 10097402347656 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
