ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd24g02 |
|---|---|
| Clone Library Name | barley_pub |
>ACCO1_ORYSA (Q40634) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4)| (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) Length = 322 Score = 57.8 bits (138), Expect = 8e-09 Identities = 30/44 (68%), Positives = 33/44 (75%) Frame = -2 Query: 197 AYPKFVFEDYXXLYVXXXFEDKEPRFEAFKTXERQQSSNLIATA 66 AYPKFVFEDY LYV FE KEPRFEAFK+ E ++SN IA A Sbjct: 280 AYPKFVFEDYMKLYVRHKFEAKEPRFEAFKSME-TETSNRIAIA 322
>ACCO_DENCR (Q9ZQZ1) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 318 Score = 55.1 bits (131), Expect = 5e-08 Identities = 28/43 (65%), Positives = 29/43 (67%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFKTXERQQSSNLIATA 66 YPKFVFEDY LYV FE KEPRFEA KT + SS I TA Sbjct: 276 YPKFVFEDYMKLYVRQKFEAKEPRFEAMKTMDAVISSQPIPTA 318
>ACCO2_DORSP (Q39705) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4)| (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) Length = 325 Score = 53.5 bits (127), Expect = 1e-07 Identities = 26/43 (60%), Positives = 29/43 (67%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFKTXERQQSSNLIATA 66 YPKFVF+DY LY+ FE KEPRFEA K+ E SS I TA Sbjct: 283 YPKFVFQDYMNLYIRKKFEAKEPRFEAMKSMEIVMSSQPIPTA 325
>ACCO1_DORSP (P31238) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4)| (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) Length = 327 Score = 53.5 bits (127), Expect = 1e-07 Identities = 26/43 (60%), Positives = 29/43 (67%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFKTXERQQSSNLIATA 66 YPKFVF+DY LY+ FE KEPRFEA K+ E SS I TA Sbjct: 285 YPKFVFQDYMNLYIRKKFEAKEPRFEAMKSMEIVMSSQPIPTA 327
>ACCO3_PETHY (Q08507) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4)| (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) Length = 320 Score = 52.4 bits (124), Expect = 3e-07 Identities = 25/43 (58%), Positives = 28/43 (65%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFKTXERQQSSNLIATA 66 YPKFVF+DY LY F+ KEPRFEA K E S+ IATA Sbjct: 278 YPKFVFDDYMKLYAGLKFQAKEPRFEAMKAREADVKSDPIATA 320
>ACCO_PRUMU (Q9MB94) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 319 Score = 51.2 bits (121), Expect = 7e-07 Identities = 26/43 (60%), Positives = 27/43 (62%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFKTXERQQSSNLIATA 66 YPKFVFEDY LY F+ KEPRFEA K E S IATA Sbjct: 277 YPKFVFEDYMKLYAGLKFQPKEPRFEAMKAVETNISLVPIATA 319
>ACCO_DIACA (P31528) Probable 1-aminocyclopropane-1-carboxylate oxidase (EC| 1.14.17.4) (ACC oxidase) (Ethylene-forming enzyme) (EFE) (Senescence-related protein) Length = 321 Score = 50.8 bits (120), Expect = 9e-07 Identities = 22/33 (66%), Positives = 25/33 (75%) Frame = -2 Query: 197 AYPKFVFEDYXXLYVXXXFEDKEPRFEAFKTXE 99 AYPKFVFEDY LY+ F++KEPRFEA K E Sbjct: 281 AYPKFVFEDYMNLYLKLKFQEKEPRFEAMKAME 313
>ACCO_ACTCH (P31237) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 319 Score = 49.7 bits (117), Expect = 2e-06 Identities = 24/42 (57%), Positives = 26/42 (61%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFKTXERQQSSNLIAT 69 YPKFVFEDY LY F+ KEPRFEA K E + IAT Sbjct: 277 YPKFVFEDYMKLYAGLKFQAKEPRFEAMKAMENAVNLGPIAT 318
>ACCO1_PETHY (Q08506) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4)| (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) Length = 319 Score = 48.9 bits (115), Expect = 4e-06 Identities = 23/42 (54%), Positives = 26/42 (61%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFKTXERQQSSNLIAT 69 YPKFVF+DY LY F+ KEPRFEA K E + IAT Sbjct: 277 YPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMETDVKMDPIAT 318
>ACCO_DIOKA (Q8S932) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 318 Score = 48.9 bits (115), Expect = 4e-06 Identities = 23/42 (54%), Positives = 26/42 (61%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFKTXERQQSSNLIAT 69 YPKFVF+DY LY F+ KEPRFEA K E + IAT Sbjct: 276 YPKFVFDDYMKLYAALKFQAKEPRFEAMKAVEANVNLGPIAT 317
>ACCO1_ARATH (Q06588) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 323 Score = 48.5 bits (114), Expect = 5e-06 Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 2/45 (4%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFKTXERQQSSNL--IATA 66 YP+FVFEDY LY F+ KEPRFEA K E ++N+ +ATA Sbjct: 279 YPRFVFEDYMKLYSAVKFQAKEPRFEAMKAMETTVANNVGPLATA 323
>ACCO3_CUCME (P54847) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4)| (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) Length = 320 Score = 48.1 bits (113), Expect = 6e-06 Identities = 24/39 (61%), Positives = 27/39 (69%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFKTXERQQSSNL 78 YPKFVF+DY LYV F+ KEPRFEA K E S+NL Sbjct: 277 YPKFVFDDYMKLYVGLKFQAKEPRFEAMKAME---STNL 312
>ACCO4_PETHY (Q08508) 1-aminocyclopropane-1-carboxylate oxidase 4 (EC 1.14.17.4)| (ACC oxidase 4) (Ethylene-forming enzyme) (EFE) Length = 319 Score = 48.1 bits (113), Expect = 6e-06 Identities = 22/42 (52%), Positives = 26/42 (61%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFKTXERQQSSNLIAT 69 YPKFVF+DY LY F+ KEPRFEA K E + +AT Sbjct: 277 YPKFVFDDYMKLYARLKFQAKEPRFEAMKAMEADVKIDPVAT 318
>ACCO4_LYCES (P24157) 1-aminocyclopropane-1-carboxylate oxidase 4 (EC 1.14.17.4)| (ACC oxidase 4) (Ethylene-forming enzyme) (EFE) (Protein pHTOM5) Length = 316 Score = 46.6 bits (109), Expect = 2e-05 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFKTXE 99 YPKFVF+DY LY F+ KEPRFEA K E Sbjct: 273 YPKFVFDDYMKLYAGLKFQPKEPRFEAMKAME 304
>ACCO1_MALDO (Q00985) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4)| (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (Protein AP4) (PAE12) Length = 314 Score = 46.2 bits (108), Expect = 2e-05 Identities = 24/43 (55%), Positives = 27/43 (62%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFKTXERQQSSNLIATA 66 YPKFVF+DY LY F+ KEPRFEA K E S +ATA Sbjct: 276 YPKFVFDDYMKLYSGLKFQAKEPRFEAMKAKE----STPVATA 314
>ACCO1_LYCES (P05116) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4)| (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (Protein pTOM 13) Length = 315 Score = 46.2 bits (108), Expect = 2e-05 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFKTXE 99 YPKFVF+DY LY F+ KEPRFEA K E Sbjct: 277 YPKFVFDDYMKLYAGLKFQAKEPRFEAMKAME 308
>ACCO1_CUCME (Q04644) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4)| (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (PMEL1) Length = 318 Score = 46.2 bits (108), Expect = 2e-05 Identities = 20/29 (68%), Positives = 22/29 (75%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFK 108 YPKFVFEDY LY+ F+ KEPRFEA K Sbjct: 279 YPKFVFEDYMKLYLGVKFQAKEPRFEAMK 307
>ACCO2_LYCES (P07920) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4)| (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) (Protein GTOMA) Length = 316 Score = 45.1 bits (105), Expect = 5e-05 Identities = 19/32 (59%), Positives = 22/32 (68%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFKTXE 99 YPKF+F+DY LY F+ KEPRFEA K E Sbjct: 278 YPKFMFDDYMKLYANLKFQAKEPRFEAMKAME 309
>ACCO2_MALDO (O48882) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4)| (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) Length = 330 Score = 44.3 bits (103), Expect = 9e-05 Identities = 19/32 (59%), Positives = 22/32 (68%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFKTXE 99 YPKF+F+DY LY F+ KEPRFEA K E Sbjct: 276 YPKFLFDDYMKLYSGLKFQAKEPRFEAMKARE 307
>ACCO_PERAE (P19464) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) (Ripening-related protein PAVOE3) Length = 320 Score = 44.3 bits (103), Expect = 9e-05 Identities = 19/29 (65%), Positives = 20/29 (68%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFK 108 YPKFVFEDY LY F+ KEPRFE K Sbjct: 278 YPKFVFEDYMNLYAGLKFQAKEPRFEVMK 306
>ACCO_PEA (P31239) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 317 Score = 43.1 bits (100), Expect = 2e-04 Identities = 18/27 (66%), Positives = 21/27 (77%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEA 114 YPKFVF+DY LY+ F+ KEPRFEA Sbjct: 275 YPKFVFDDYMKLYMGLKFQAKEPRFEA 301
>ACCO1_BRAJU (Q09052) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 320 Score = 43.1 bits (100), Expect = 2e-04 Identities = 18/29 (62%), Positives = 20/29 (68%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFK 108 YP FVF+DY LY F+ KEPRFEA K Sbjct: 275 YPSFVFDDYMKLYAGVKFQPKEPRFEAMK 303
>ACCO_MUSAC (Q9FR99) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 306 Score = 39.7 bits (91), Expect = 0.002 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = -2 Query: 194 YPKFVFEDYXXLYVXXXFEDKEPRFEAFK 108 YPKF+F DY +Y +E KEPRFEA + Sbjct: 276 YPKFLFGDYMDVYAKQKYEPKEPRFEAVR 304
>HIS6_METKA (Q8TYW8) Imidazole glycerol phosphate synthase subunit hisF (EC| 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit hisF) Length = 272 Score = 29.3 bits (64), Expect = 2.9 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -1 Query: 135 QGAQVRGLQDXGEAAELQPHRYR 67 +G + RGL+D G+ AEL H YR Sbjct: 20 KGVRFRGLRDAGDPAELAHHYYR 42 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,429,856 Number of Sequences: 219361 Number of extensions: 157536 Number of successful extensions: 226 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 226 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 226 length of database: 80,573,946 effective HSP length: 45 effective length of database: 70,702,701 effective search space used: 1696864824 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
