ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24g02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB044747.1| Phyllostachys edulis BA-ACO mRNA for 1-aminocycl... 153 3e-34
2emb|X85747.1|OS1A1COX O.sativa mRNA for 1-aminocyclopropane-1-ca... 131 9e-28
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 131 9e-28
4dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic D... 131 9e-28
5dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic D... 131 9e-28
6dbj|AK058296.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 9e-28
7dbj|AK104933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 4e-24
8dbj|AK065039.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 4e-24
9gb|AF049888.1|AF049888 Oryza sativa 1-aminocyclopropane-1-carbox... 119 4e-24
10gb|AY521566.1| Saccharum officinarum 1-aminocyclopropane-1-carbo... 105 5e-20
11gb|AY359576.1| Zea mays B73 acc oxidase (ACO35) gene, complete cds 90 3e-15
12gb|AY109855.1| Zea mays CL955_1 mRNA sequence 88 1e-14
13gb|AY359575.1| Zea mays W64A acc oxidase (ACO20) mRNA, complete cds 80 3e-12
14gb|AY359574.1| Zea mays B73 acc oxidase (ACO20) gene, partial cds 80 3e-12
15gb|AF079589.1|AF079589 Sorghum bicolor 1-aminocyclopropane-1-car... 80 3e-12
16gb|AF442821.1|AF442821 Saccharum officinarum 1-aminocyclopropane... 78 1e-11
17ref|XM_507001.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 1e-08
18ref|XM_468017.1| Oryza sativa (japonica cultivar-group), mRNA 68 1e-08
19dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 68 1e-08
20dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic D... 68 1e-08
21dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic D... 68 1e-08
22dbj|AK103969.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
23dbj|AK071557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
24dbj|AK066805.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
25gb|AF049889.1|AF049889 Oryza sativa 1-aminocyclopropane-1-carbox... 68 1e-08
26dbj|AB072040.1| Striga hermonthica SHACO1 mRNA for ACC oxidase, ... 50 0.003
27gb|DQ116443.1| Gossypium hirsutum ACC oxidase 2 (ACO2) mRNA, com... 46 0.043
28gb|AY359572.1| Zea mays B73 acc oxidase (ACO15) gene, complete cds 44 0.17
29dbj|AB232766.1| Tulipa gesneriana aco mRNA, complete cds, clone:... 42 0.67
30dbj|AB042107.1| Pyrus pyrifolia PPAOX3 mRNA for 1-aminocycloprop... 42 0.67
31emb|AL772282.9| Mouse DNA sequence from clone RP23-328F3 on chro... 42 0.67
32gb|AF131215.2| Homo sapiens chromosome 8 map 8p23-p22 clone CTC-... 40 2.7
33dbj|BS000101.1| Pan troglodytes chromosome 22 clone:PTB-115B20, ... 40 2.7 
>dbj|AB044747.1| Phyllostachys edulis BA-ACO mRNA for
            1-aminocyclopropane-1-carboxylate oxidase, complete cds
          Length = 1375

 Score =  153 bits (77), Expect = 3e-34
 Identities = 101/111 (90%)
 Strand = Plus / Minus

                                                                        
Query: 97   ctctccanggtcttgaaggcctcgaacctgggctccttgtcctcgaactngnggngcacg 156
            ||||||| || |||||||||||||||||||||||||||||||||||||| | || |||||
Sbjct: 1044 ctctccatggacttgaaggcctcgaacctgggctccttgtcctcgaacttgtggcgcacg 985

                                                               
Query: 157  tacagcnccntgtagtcctcgaacacgaacttggggtacgccccgccggcc 207
            |||||   | |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 984  tacagattcatgtagtcctcgaacacgaacttggggtacgtcccgccggcc 934
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>emb|X85747.1|OS1A1COX O.sativa mRNA for 1-aminocyclopropane-1-carboxylate oxidase
          Length = 1595

 Score =  131 bits (66), Expect = 9e-28
 Identities = 96/108 (88%)
 Strand = Plus / Minus

                                                                        
Query: 100  tccanggtcttgaaggcctcgaacctgggctccttgtcctcgaactngnggngcacgtac 159
            |||| || |||||| ||||||||||||||||||||| ||||||||| | || ||||||||
Sbjct: 1357 tccatggacttgaacgcctcgaacctgggctccttggcctcgaacttgtggcgcacgtac 1298

                                                            
Query: 160  agcnccntgtagtcctcgaacacgaacttggggtacgccccgccggcc 207
            |||  | |||||||||||||||||||||||||||||||| || |||||
Sbjct: 1297 agcttcatgtagtcctcgaacacgaacttggggtacgccacgacggcc 1250
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  131 bits (66), Expect = 9e-28
 Identities = 96/108 (88%)
 Strand = Plus / Minus

                                                                            
Query: 100      tccanggtcttgaaggcctcgaacctgggctccttgtcctcgaactngnggngcacgtac 159
                |||| || |||||| ||||||||||||||||||||| ||||||||| | || ||||||||
Sbjct: 16872020 tccatggacttgaacgcctcgaacctgggctccttggcctcgaacttgtggcgcacgtac 16871961

                                                                
Query: 160      agcnccntgtagtcctcgaacacgaacttggggtacgccccgccggcc 207
                |||  | |||||||||||||||||||||||||||||||| || |||||
Sbjct: 16871960 agcttcatgtagtcctcgaacacgaacttggggtacgccacgacggcc 16871913



 Score =  119 bits (60), Expect = 4e-24
 Identities = 96/110 (87%)
 Strand = Plus / Plus

                                                                            
Query: 98       tctccanggtcttgaaggcctcgaacctgggctccttgtcctcgaactngnggngcacgt 157
                |||||| || |||||| |||||||||| |||||||||| ||||||||| | || ||||||
Sbjct: 16831821 tctccatggccttgaacgcctcgaaccggggctccttggcctcgaacttgtggcgcacgt 16831880

                                                                  
Query: 158      acagcnccntgtagtcctcgaacacgaacttggggtacgccccgccggcc 207
                |||||  | ||||||||||||||||||||||||| |||| | ||||||||
Sbjct: 16831881 acagcttcatgtagtcctcgaacacgaacttgggatacgtctcgccggcc 16831930
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>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0488D02
          Length = 154537

 Score =  131 bits (66), Expect = 9e-28
 Identities = 96/108 (88%)
 Strand = Plus / Minus

                                                                        
Query: 100  tccanggtcttgaaggcctcgaacctgggctccttgtcctcgaactngnggngcacgtac 159
            |||| || |||||| ||||||||||||||||||||| ||||||||| | || ||||||||
Sbjct: 1833 tccatggacttgaacgcctcgaacctgggctccttggcctcgaacttgtggcgcacgtac 1774

                                                            
Query: 160  agcnccntgtagtcctcgaacacgaacttggggtacgccccgccggcc 207
            |||  | |||||||||||||||||||||||||||||||| || |||||
Sbjct: 1773 agcttcatgtagtcctcgaacacgaacttggggtacgccacgacggcc 1726
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>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1163_C07
          Length = 107121

 Score =  131 bits (66), Expect = 9e-28
 Identities = 96/108 (88%)
 Strand = Plus / Minus

                                                                         
Query: 100   tccanggtcttgaaggcctcgaacctgggctccttgtcctcgaactngnggngcacgtac 159
             |||| || |||||| ||||||||||||||||||||| ||||||||| | || ||||||||
Sbjct: 69711 tccatggacttgaacgcctcgaacctgggctccttggcctcgaacttgtggcgcacgtac 69652

                                                             
Query: 160   agcnccntgtagtcctcgaacacgaacttggggtacgccccgccggcc 207
             |||  | |||||||||||||||||||||||||||||||| || |||||
Sbjct: 69651 agcttcatgtagtcctcgaacacgaacttggggtacgccacgacggcc 69604



 Score =  119 bits (60), Expect = 4e-24
 Identities = 96/110 (87%)
 Strand = Plus / Plus

                                                                         
Query: 98    tctccanggtcttgaaggcctcgaacctgggctccttgtcctcgaactngnggngcacgt 157
             |||||| || |||||| |||||||||| |||||||||| ||||||||| | || ||||||
Sbjct: 29512 tctccatggccttgaacgcctcgaaccggggctccttggcctcgaacttgtggcgcacgt 29571

                                                               
Query: 158   acagcnccntgtagtcctcgaacacgaacttggggtacgccccgccggcc 207
             |||||  | ||||||||||||||||||||||||| |||| | ||||||||
Sbjct: 29572 acagcttcatgtagtcctcgaacacgaacttgggatacgtctcgccggcc 29621
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>dbj|AK058296.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F04, full
            insert sequence
          Length = 1426

 Score =  131 bits (66), Expect = 9e-28
 Identities = 96/108 (88%)
 Strand = Plus / Minus

                                                                        
Query: 100  tccanggtcttgaaggcctcgaacctgggctccttgtcctcgaactngnggngcacgtac 159
            |||| || |||||| ||||||||||||||||||||| ||||||||| | || ||||||||
Sbjct: 1051 tccatggacttgaacgcctcgaacctgggctccttggcctcgaacttgtggcgcacgtac 992

                                                            
Query: 160  agcnccntgtagtcctcgaacacgaacttggggtacgccccgccggcc 207
            |||  | |||||||||||||||||||||||||||||||| || |||||
Sbjct: 991  agcttcatgtagtcctcgaacacgaacttggggtacgccacgacggcc 944
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>dbj|AK104933.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C08, full
           insert sequence
          Length = 1326

 Score =  119 bits (60), Expect = 4e-24
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                       
Query: 98  tctccanggtcttgaaggcctcgaacctgggctccttgtcctcgaactngnggngcacgt 157
           |||||| || |||||| |||||||||| |||||||||| ||||||||| | || ||||||
Sbjct: 996 tctccatggccttgaacgcctcgaaccggggctccttggcctcgaacttgtggcgcacgt 937

                                                             
Query: 158 acagcnccntgtagtcctcgaacacgaacttggggtacgccccgccggcc 207
           |||||  | ||||||||||||||||||||||||| |||| | ||||||||
Sbjct: 936 acagcttcatgtagtcctcgaacacgaacttgggatacgtctcgccggcc 887
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>dbj|AK065039.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H16, full
           insert sequence
          Length = 1414

 Score =  119 bits (60), Expect = 4e-24
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                       
Query: 98  tctccanggtcttgaaggcctcgaacctgggctccttgtcctcgaactngnggngcacgt 157
           |||||| || |||||| |||||||||| |||||||||| ||||||||| | || ||||||
Sbjct: 986 tctccatggccttgaacgcctcgaaccggggctccttggcctcgaacttgtggcgcacgt 927

                                                             
Query: 158 acagcnccntgtagtcctcgaacacgaacttggggtacgccccgccggcc 207
           |||||  | ||||||||||||||||||||||||| |||| | ||||||||
Sbjct: 926 acagcttcatgtagtcctcgaacacgaacttgggatacgtctcgccggcc 877
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>gb|AF049888.1|AF049888 Oryza sativa 1-aminocyclopropane-1-carboxylate oxidase (ACO1) mRNA,
           partial cds
          Length = 1072

 Score =  119 bits (60), Expect = 4e-24
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                       
Query: 98  tctccanggtcttgaaggcctcgaacctgggctccttgtcctcgaactngnggngcacgt 157
           |||||| || |||||| |||||||||| |||||||||| ||||||||| | || ||||||
Sbjct: 913 tctccatggccttgaacgcctcgaaccggggctccttggcctcgaacttgtggcgcacgt 854

                                                             
Query: 158 acagcnccntgtagtcctcgaacacgaacttggggtacgccccgccggcc 207
           |||||  | ||||||||||||||||||||||||| |||| | ||||||||
Sbjct: 853 acagcttcatgtagtcctcgaacacgaacttgggatacgtctcgccggcc 804
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>gb|AY521566.1| Saccharum officinarum 1-aminocyclopropane-1-carboxylate oxidase (aco)
            mRNA, complete cds
          Length = 1307

 Score =  105 bits (53), Expect = 5e-20
 Identities = 89/103 (86%)
 Strand = Plus / Minus

                                                                        
Query: 98   tctccanggtcttgaaggcctcgaacctgggctccttgtcctcgaactngnggngcacgt 157
            |||||| || |||||| ||||||||||  ||||||||| ||||||||| | |  ||||||
Sbjct: 1065 tctccacggacttgaacgcctcgaaccgtggctccttggcctcgaacttgtgccgcacgt 1006

                                                       
Query: 158  acagcnccntgtagtcctcgaacacgaacttggggtacgcccc 200
            |||||  | |||||||||||||||||||| |||||||||||||
Sbjct: 1005 acagcttcatgtagtcctcgaacacgaacctggggtacgcccc 963
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>gb|AY359576.1| Zea mays B73 acc oxidase (ACO35) gene, complete cds
          Length = 4336

 Score = 89.7 bits (45), Expect = 3e-15
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                        
Query: 114  ggcctcgaacctgggctccttgtcctcgaactngnggngcacgtacagcnccntgtagtc 173
            |||||||||||||||||||||| ||||||||| | || ||||||||||   | |||||||
Sbjct: 3902 ggcctcgaacctgggctccttggcctcgaacttgtggcgcacgtacaggttcatgtagtc 3843

                        
Query: 174  ctcgaacacgaa 185
            ||||||||||||
Sbjct: 3842 ctcgaacacgaa 3831
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>gb|AY109855.1| Zea mays CL955_1 mRNA sequence
          Length = 1202

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                        
Query: 98   tctccanggtcttgaaggcctcgaacctgggctccttgtcctcgaactngnggngcacgt 157
            |||||| || |||||||||||||||||  ||||||||| ||||||||| | |  ||||||
Sbjct: 1041 tctccatggacttgaaggcctcgaaccgtggctccttggcctcgaacttgtgccgcacgt 982

                                                  
Query: 158  acagcnccntgtagtcctcgaacacgaacttggggtac 195
            |||||  | ||||||||||||| |||||  ||||||||
Sbjct: 981  acagcttcatgtagtcctcgaagacgaagctggggtac 944
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>gb|AY359575.1| Zea mays W64A acc oxidase (ACO20) mRNA, complete cds
          Length = 1262

 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                        
Query: 114  ggcctcgaacctgggctccttgtcctcgaactngnggngcacgtacagcnccntgtagtc 173
            ||||||||||| |||||||||| ||||||||| | || || |||||||   | |||||||
Sbjct: 1002 ggcctcgaaccggggctccttggcctcgaacttgtggcgcgcgtacaggttcatgtagtc 943

                                   
Query: 174  ctcgaacacgaacttggggtacg 196
            ||||||||||||| | |||||||
Sbjct: 942  ctcgaacacgaacctcgggtacg 920
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>gb|AY359574.1| Zea mays B73 acc oxidase (ACO20) gene, partial cds
          Length = 1516

 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 114 ggcctcgaacctgggctccttgtcctcgaactngnggngcacgtacagcnccntgtagtc 173
           ||||||||||| |||||||||| ||||||||| | || || |||||||   | |||||||
Sbjct: 783 ggcctcgaaccggggctccttggcctcgaacttgtggcgcgcgtacaggttcatgtagtc 724

                                  
Query: 174 ctcgaacacgaacttggggtacg 196
           ||||||||||||| | |||||||
Sbjct: 723 ctcgaacacgaacctcgggtacg 701
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>gb|AF079589.1|AF079589 Sorghum bicolor 1-aminocyclopropane-1-carboxylate oxidase (ACO2)
           mRNA, partial cds
          Length = 876

 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 114 ggcctcgaacctgggctccttgtcctcgaactngnggngcacgtacagcnccntgtagtc 173
           |||||||||||  ||||||||| ||||||||| | || ||||||||||   | |||||||
Sbjct: 558 ggcctcgaaccgtggctccttggcctcgaacttgtggcgcacgtacaggttcatgtagtc 499

                                  
Query: 174 ctcgaacacgaacttggggtacg 196
           ||||||||||||| | |||||||
Sbjct: 498 ctcgaacacgaacctcgggtacg 476
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>gb|AF442821.1|AF442821 Saccharum officinarum 1-aminocyclopropane-1-carboxylate oxidase
           (ACO) gene, partial cds
          Length = 940

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                       
Query: 127 ggctccttgtcctcgaactngnggngcacgtacagcnccntgtagtcctcgaacacgaac 186
           ||||||||| ||||||||| | |  |||||||| ||  | ||||||||||||||||||||
Sbjct: 930 ggctccttggcctcgaacttgtgccgcacgtactgcttcatgtagtcctcgaacacgaac 871

                         
Query: 187 ttggggtacgcccc 200
            |||||||||||||
Sbjct: 870 ctggggtacgcccc 857
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>ref|XM_507001.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1353_F08.16-1
           mRNA
          Length = 1411

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                       
Query: 114 ggcctcgaacctgggctccttgtcctcgaactngnggngcacgtacagcnccntgtagtc 173
           ||||||||| |  ||||||||| ||||||||| | || ||||||||||   | |||||||
Sbjct: 984 ggcctcgaagcgtggctccttggcctcgaacttgtggcgcacgtacaggttcatgtagtc 925

                        
Query: 174 ctcgaacacgaac 186
           |||||||||||||
Sbjct: 924 ctcgaacacgaac 912
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>ref|XM_468017.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1316

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                       
Query: 114 ggcctcgaacctgggctccttgtcctcgaactngnggngcacgtacagcnccntgtagtc 173
           ||||||||| |  ||||||||| ||||||||| | || ||||||||||   | |||||||
Sbjct: 993 ggcctcgaagcgtggctccttggcctcgaacttgtggcgcacgtacaggttcatgtagtc 934

                        
Query: 174 ctcgaacacgaac 186
           |||||||||||||
Sbjct: 933 ctcgaacacgaac 921
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                            
Query: 114      ggcctcgaacctgggctccttgtcctcgaactngnggngcacgtacagcnccntgtagtc 173
                ||||||||| |  ||||||||| ||||||||| | || ||||||||||   | |||||||
Sbjct: 32580717 ggcctcgaagcgtggctccttggcctcgaacttgtggcgcacgtacaggttcatgtagtc 32580658

                             
Query: 174      ctcgaacacgaac 186
                |||||||||||||
Sbjct: 32580657 ctcgaacacgaac 32580645
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>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1611_C08
          Length = 135386

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                        
Query: 114  ggcctcgaacctgggctccttgtcctcgaactngnggngcacgtacagcnccntgtagtc 173
            ||||||||| |  ||||||||| ||||||||| | || ||||||||||   | |||||||
Sbjct: 8088 ggcctcgaagcgtggctccttggcctcgaacttgtggcgcacgtacaggttcatgtagtc 8029

                         
Query: 174  ctcgaacacgaac 186
            |||||||||||||
Sbjct: 8028 ctcgaacacgaac 8016
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>dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1353_F08
          Length = 101988

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                         
Query: 114   ggcctcgaacctgggctccttgtcctcgaactngnggngcacgtacagcnccntgtagtc 173
             ||||||||| |  ||||||||| ||||||||| | || ||||||||||   | |||||||
Sbjct: 77690 ggcctcgaagcgtggctccttggcctcgaacttgtggcgcacgtacaggttcatgtagtc 77631

                          
Query: 174   ctcgaacacgaac 186
             |||||||||||||
Sbjct: 77630 ctcgaacacgaac 77618
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>dbj|AK103969.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B02, full
           insert sequence
          Length = 1316

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                       
Query: 114 ggcctcgaacctgggctccttgtcctcgaactngnggngcacgtacagcnccntgtagtc 173
           ||||||||| |  ||||||||| ||||||||| | || ||||||||||   | |||||||
Sbjct: 993 ggcctcgaagcgtggctccttggcctcgaacttgtggcgcacgtacaggttcatgtagtc 934

                        
Query: 174 ctcgaacacgaac 186
           |||||||||||||
Sbjct: 933 ctcgaacacgaac 921
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>dbj|AK071557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099D13, full
           insert sequence
          Length = 1411

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                       
Query: 114 ggcctcgaacctgggctccttgtcctcgaactngnggngcacgtacagcnccntgtagtc 173
           ||||||||| |  ||||||||| ||||||||| | || ||||||||||   | |||||||
Sbjct: 984 ggcctcgaagcgtggctccttggcctcgaacttgtggcgcacgtacaggttcatgtagtc 925

                        
Query: 174 ctcgaacacgaac 186
           |||||||||||||
Sbjct: 924 ctcgaacacgaac 912
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>dbj|AK066805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078A14, full
            insert sequence
          Length = 3000

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                        
Query: 114  ggcctcgaacctgggctccttgtcctcgaactngnggngcacgtacagcnccntgtagtc 173
            ||||||||| |  ||||||||| ||||||||| | || ||||||||||   | |||||||
Sbjct: 2677 ggcctcgaagcgtggctccttggcctcgaacttgtggcgcacgtacaggttcatgtagtc 2618

                         
Query: 174  ctcgaacacgaac 186
            |||||||||||||
Sbjct: 2617 ctcgaacacgaac 2605
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>gb|AF049889.1|AF049889 Oryza sativa 1-aminocyclopropane-1-carboxylate oxidase (ACO2) mRNA,
           complete cds
          Length = 1299

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                       
Query: 114 ggcctcgaacctgggctccttgtcctcgaactngnggngcacgtacagcnccntgtagtc 173
           ||||||||| |  ||||||||| ||||||||| | || ||||||||||   | |||||||
Sbjct: 976 ggcctcgaagcgtggctccttggcctcgaacttgtggcgcacgtacaggttcatgtagtc 917

                        
Query: 174 ctcgaacacgaac 186
           |||||||||||||
Sbjct: 916 ctcgaacacgaac 904
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>dbj|AB072040.1| Striga hermonthica SHACO1 mRNA for ACC oxidase, complete cds
          Length = 1261

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 71/88 (80%)
 Strand = Plus / Minus

                                                                        
Query: 107  tcttgaaggcctcgaacctgggctccttgtcctcgaactngnggngcacgtacagcnccn 166
            |||| ||||||||||| |||||||| ||| ||| ||||| | ||  | |||| |||  | 
Sbjct: 1002 tcttaaaggcctcgaatctgggctctttggcctggaacttgaggcccgcgtagagcttca 943

                                        
Query: 167  tgtagtcctcgaacacgaacttggggta 194
            ||||||| ||||||||||| || |||||
Sbjct: 942  tgtagtcttcgaacacgaatttcgggta 915
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>gb|DQ116443.1| Gossypium hirsutum ACC oxidase 2 (ACO2) mRNA, complete cds
          Length = 1227

 Score = 46.1 bits (23), Expect = 0.043
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 100 tccanggtcttgaaggcctcgaacctgggctccttgtcctcgaact 145
           |||| |||||| | ||| |||||||| ||||||||||| |||||||
Sbjct: 981 tccatggtcttcatggcttcgaacctcggctccttgtcttcgaact 936



 Score = 46.1 bits (23), Expect = 0.043
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 167 tgtagtcctcgaacacgaacttggggtacgc 197
           ||||||||||||||||||| || ||||||||
Sbjct: 914 tgtagtcctcgaacacgaatttcgggtacgc 884
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>gb|AY359572.1| Zea mays B73 acc oxidase (ACO15) gene, complete cds
          Length = 2960

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 108  cttgaaggcctcgaacctgggctccttgtcctcgaact 145
            ||||| ||| |||||||||||||||||| ||| |||||
Sbjct: 2312 cttgacggcttcgaacctgggctccttggcctggaact 2275
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>dbj|AB232766.1| Tulipa gesneriana aco mRNA, complete cds, clone:TgACO2
          Length = 1077

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 167 tgtagtcctcgaacacgaacttggggtac 195
           |||||||||||||||| ||||| ||||||
Sbjct: 905 tgtagtcctcgaacacaaacttcgggtac 877
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>dbj|AB042107.1| Pyrus pyrifolia PPAOX3 mRNA for 1-aminocyclopropane-1-carboxylate
           oxidase, complete cds
          Length = 1155

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 167 tgtagtcctcgaacacgaacttggggtac 195
           ||||||| |||||||||||||| ||||||
Sbjct: 904 tgtagtcttcgaacacgaacttcgggtac 876
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>emb|AL772282.9| Mouse DNA sequence from clone RP23-328F3 on chromosome 2, complete
             sequence
          Length = 188624

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 79    aggttggagctctgctgcctctcca 103
             |||| ||||||||||||||||||||
Sbjct: 38116 aggtgggagctctgctgcctctcca 38092
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>gb|AF131215.2| Homo sapiens chromosome 8 map 8p23-p22 clone CTC-306G11, complete
             sequence; and clones CTC-493P15, CTB-91N18, CTC-164D9,
             partial sequence
          Length = 186607

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    ggagctctgctgcctctcca 103
             ||||||||||||||||||||
Sbjct: 49702 ggagctctgctgcctctcca 49683
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>dbj|BS000101.1| Pan troglodytes chromosome 22 clone:PTB-115B20, map 22, complete
              sequences
          Length = 191901

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 18     ttttgaagctttattattcagacc 41
              |||||||||||||||||| |||||
Sbjct: 131407 ttttgaagctttattattgagacc 131430


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,113,647
Number of Sequences: 3902068
Number of extensions: 1113647
Number of successful extensions: 79991
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79886
Number of HSP's gapped (non-prelim): 105
length of query: 210
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 188
effective length of database: 17,147,199,772
effective search space: 3223673557136
effective search space used: 3223673557136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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