Clone Name | rbasd24f16 |
---|---|
Clone Library Name | barley_pub |
>BGLX_SALTY (Q56078) Periplasmic beta-glucosidase precursor (EC 3.2.1.21)| (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) (T-cell inhibitor) Length = 765 Score = 69.3 bits (168), Expect = 8e-12 Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 24/155 (15%) Frame = -1 Query: 482 DSAAVDSGKYDYAIVVVGEPP-YAETFGDNLNLTIPAPGPSVIQNVCKSVR-CVVVLISG 309 D A + + D + VVGE A N+TIP +I + + + V+VL++G Sbjct: 493 DEAVQAAKQADVVVAVVGESQGMAHEASSRTNITIPQSQRDLITALKATGKPLVLVLMNG 552 Query: 308 RPLVVEPYISAMDAFVAAWLPGSEG-QGVADVLFGDYGFSGKLARTWFKSADQLP----- 147 RPL + DA + W G+EG +ADVLFGDY SGKL ++ +S Q+P Sbjct: 553 RPLALVKEDQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPISFPRSVGQIPVYYSH 612 Query: 146 MNVG----------------DKHYDPLFPFGFGLT 90 +N G D+ PL+PFG+GL+ Sbjct: 613 LNTGRPYNPEKPNKYTSRYFDEANGPLYPFGYGLS 647
>BGLX_ECOLI (P33363) Periplasmic beta-glucosidase precursor (EC 3.2.1.21)| (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 765 Score = 66.2 bits (160), Expect = 7e-11 Identities = 53/168 (31%), Positives = 79/168 (47%), Gaps = 24/168 (14%) Frame = -1 Query: 521 VDPSTEVVFSENPDSAAVDSGKYDYAIVVVGEPP-YAETFGDNLNLTIPAPGPSVIQNVC 345 VDP + E D A + + D + VVGE A ++TIP +I + Sbjct: 483 VDPRSP---QEMIDEAVQTAKQSDVVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALK 539 Query: 344 KSVR-CVVVLISGRPLVVEPYISAMDAFVAAWLPGSEG-QGVADVLFGDYGFSGKLARTW 171 + + V+VL++GRPL + DA + W G+EG +ADVLFGDY SGKL ++ Sbjct: 540 ATGKPLVLVLMNGRPLALVKEDQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSF 599 Query: 170 FKSADQLP-----MNVG----------------DKHYDPLFPFGFGLT 90 +S Q+P +N G D+ L+PFG+GL+ Sbjct: 600 PRSVGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANGALYPFGYGLS 647
>BGLS_KLUMA (P07337) Beta-glucosidase precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 845 Score = 60.8 bits (146), Expect = 3e-09 Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 25/155 (16%) Frame = -1 Query: 479 SAAVDSGKYDYAIVVVGEPPYAETFG-DNLNLTIPAPGPSVIQNVCKS-VRCVVVLISGR 306 +AA + K+D A++++G ET G D N+ +P +++ V K+ V+V SG Sbjct: 566 NAAELAAKHDKAVLIIGLNGEWETEGYDRENMDLPKRTNELVRAVLKANPNTVIVNQSGT 625 Query: 305 PLVVEPYISAMDAFVAAWLPGSE-GQGVADVLFGDYGFSGKLARTW-FKSADQ------- 153 P V P++ +A V AW G+E G +ADVL+GD +GKL+ +W FK D Sbjct: 626 P-VEFPWLEEANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLSWPFKLQDNPAFLNFK 684 Query: 152 ---------LPMNVGDKHYDPL-----FPFGFGLT 90 + VG ++Y+ L FPFG+GL+ Sbjct: 685 TEFGRVVYGEDIFVGYRYYEKLQRKVAFPFGYGLS 719
>BGLS_AGRTU (P27034) Beta-glucosidase (EC 3.2.1.21) (Gentiobiase) (Cellobiase)| (Beta-D-glucoside glucohydrolase) Length = 818 Score = 56.6 bits (135), Expect = 5e-08 Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 29/151 (19%) Frame = -1 Query: 458 KYDYAIVVVGEPPYAETFGDNL-NLTIPAPGPSVIQNVCKS-VRCVVVLISGRPLVVEPY 285 K D +++VG +T G +L ++ +P +I+ V ++ VVVL +G P+ + P+ Sbjct: 542 KSDIVLLLVGREGEWDTEGLDLPDMRLPGRQEELIEAVAETNPNVVVVLQTGGPIEM-PW 600 Query: 284 ISAMDAFVAAWLPGSE-GQGVADVLFGDYGFSGKLARTWFKS-ADQLPMN---------- 141 + + A + W PG E G +ADVLFGD +G+L +T+ K+ D + Sbjct: 601 LGKVRAVLQMWYPGQELGNALADVLFGDVEPAGRLPQTFPKALTDNSAITDDPSIYPGQD 660 Query: 140 ----------VGDKHYD-----PLFPFGFGL 93 VG +H+D PLFPFGFGL Sbjct: 661 GHVRYAEGIFVGYRHHDTREIEPLFPFGFGL 691
>XYNB_PRUPE (P83344) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152)| (Fragment) Length = 461 Score = 46.2 bits (108), Expect = 7e-05 Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 27/148 (18%) Frame = -1 Query: 452 DYAIVVVGEPPYAET-FGDNLNLTIPAPGPSVIQNVCKSVR--CVVVLISGRPLVV---- 294 D ++V+G E F D L +P ++ V ++ R ++VL+SG P+ V Sbjct: 170 DATVLVMGLDQSIEAEFVDRAGLLLPGHQQELVSRVARASRGPTILVLMSGGPIDVTFAK 229 Query: 293 -EPYISAMDAFVAAWLPGSEG-QGVADVLFGDYGFSGKLARTWFKS--ADQLPMNVGDKH 126 +P ISA+ + PG G +A+VLFG GKL TW+ LPM Sbjct: 230 NDPRISAI---IWVGYPGQAGGTAIANVLFGTANPGGKLPMTWYPQNYVTHLPMTDMAMR 286 Query: 125 YDP----------------LFPFGFGLT 90 DP +FPFG GL+ Sbjct: 287 ADPARGYPGRTYRFYIGPVVFPFGLGLS 314
>BGLS_SCHCO (P29091) Beta-glucosidase (EC 3.2.1.21) (Gentiobiase) (Cellobiase)| (Beta-D-glucoside glucohydrolase) (Fragment) Length = 192 Score = 45.8 bits (107), Expect = 9e-05 Identities = 46/151 (30%), Positives = 64/151 (42%), Gaps = 14/151 (9%) Frame = -1 Query: 548 TILSAIKSTVDPSTEVVFSENPDS----AAVDSGKYDYAIVVV------GEPPYAETFGD 399 T L AI + V S DS AA + D AIV + G GD Sbjct: 7 TPLDAITARAQEDGTTVTSSLSDSDTARAAQIAAAADVAIVFISSDSGEGYLTVEGNAGD 66 Query: 398 NLNLTIPAPGPSVIQNVCKSVRCVVVLISG-RPLVVEPYISAMDAFVAAW--LPGSE-GQ 231 +L G +++Q V + +V ++ ++ E +I + W LPG E G Sbjct: 67 RNDLLAWHDGDALVQAVADANENTIVAVNTVGAIITEAWIEHPNVKAVVWSGLPGQEAGN 126 Query: 230 GVADVLFGDYGFSGKLARTWFKSADQLPMNV 138 VAD+L+G Y SG+L T KSAD P V Sbjct: 127 SVADILYGAYNPSGRLPYTIAKSADDYPAQV 157
>BGLB_CLOTM (P14002) Thermostable beta-glucosidase B (EC 3.2.1.21)| (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 754 Score = 44.3 bits (103), Expect = 3e-04 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 24/145 (16%) Frame = -1 Query: 452 DYAIVVVGEPPYAETFG-DNLNLTIPAPGPSVIQNVCK-SVRCVVVLISGRPLVVEPYIS 279 D A+V G P E+ G D +++IP +I+ V + VVVL++G P+ + P+I Sbjct: 405 DVAVVFAGLPDEYESEGFDRTHMSIPENQNRLIEAVAEVQSNIVVVLLNGSPVEM-PWID 463 Query: 278 AMDAFVAAWLPGSEGQGVADVLFGDYGFSGKLARTWFKSADQLP---------------- 147 + + + A+L G G + + GKLA T+ P Sbjct: 464 KVKSVLEAYLGGQALGGRWRMCYSVKSIVGKLAETFPVKLSHNPSYLNFPGEDDRVEYKE 523 Query: 146 -MNVGDKHYD-----PLFPFGFGLT 90 + VG ++YD PLFPFG GL+ Sbjct: 524 GLFVGYRYYDTKGIEPLFPFGHGLS 548
>BGLS_HANAN (P06835) Beta-glucosidase precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 825 Score = 41.6 bits (96), Expect = 0.002 Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 12/124 (9%) Frame = -1 Query: 479 SAAVDSGKYDYAIVVVGEPPYAE-------TFGDNLNLTIPAPGPSVIQNVCK-SVRCVV 324 +AA+DS Y A + V E +GD NLT+ +I+N+ + +V Sbjct: 501 AAAMDSALYADAAIEVANSVAGEEIGDVDGNYGDLNNLTLWHNAVPLIKNISSINNNTIV 560 Query: 323 VLISGRPLVVEPYI---SAMDAFVAAWLPGSEGQGVADVLFGDYGFSGKLARTWFKSA-D 156 ++ SG+ + +EP+I + +++L G +A VLFGD SGKL T K D Sbjct: 561 IVTSGQQIDLEPFIDNENVTAVIYSSYLGQDFGTVLAKVLFGDENPSGKLPFTIAKDVND 620 Query: 155 QLPM 144 +P+ Sbjct: 621 YIPV 624
>BGL1_ASPAC (P48825) Beta-glucosidase 1 precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 860 Score = 38.5 bits (88), Expect = 0.015 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 6/89 (6%) Frame = -1 Query: 404 GDNLNLTIPAPGPSVIQ---NVCKSVRCVVVLISGRPLVVEPYISAMDAFVAAW--LPGS 240 GD NLT+ G ++I+ N C + +VV+ S P++V+ + + W LPG Sbjct: 519 GDRNNLTLWKNGDNLIKAAANNCNNT--IVVIHSVGPVLVDEWYDHPNVTAILWAGLPGQ 576 Query: 239 E-GQGVADVLFGDYGFSGKLARTWFKSAD 156 E G +ADVL+G K TW K+ + Sbjct: 577 ESGNSLADVLYGRVNPGAKSPFTWGKTRE 605
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 34.3 bits (77), Expect = 0.28 Identities = 41/158 (25%), Positives = 60/158 (37%), Gaps = 3/158 (1%) Frame = +1 Query: 61 SHPTHFLASVVRPNPKGKSGS*CLSPTFIGSWSADLNHVRASFPENP*SPNSTS-ATPWP 237 S+PT S +P S S + T S S + S SP+STS ++ Sbjct: 179 SNPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLT 238 Query: 238 SEPGSHAATNASMALMYGSTTSGLPEMSXXXXXXXXX--XFWITEGPGAGIVRFRLSPNV 411 S S +T+ S S+TS P + T + S + Sbjct: 239 STSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASSTSTSSYSTSTSP 298 Query: 412 SAYGGSPTTTMA*SYLPLSTAALSGFSEKTTSVLGSTV 525 S SPT S P ST+ S F++ T+S LGS++ Sbjct: 299 SLTSSSPTLA---STSPSSTSISSTFTDSTSS-LGSSI 332
>BGL1_SACFI (P22506) Beta-glucosidase 1 precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 876 Score = 33.5 bits (75), Expect = 0.48 Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 30/135 (22%) Frame = -1 Query: 404 GDNLNLTIPAPGPSVIQNVCKS-VRCVVVLISGRPLVVEPYISAMDAFVAAW---LPGSE 237 GD NLT+ G +I+ V ++ VVV+ S + E + + W L Sbjct: 540 GDRKNLTLWNNGDKLIETVAENCANTVVVVTSTGQINFEGFADHPNVTAIVWAGPLGDRS 599 Query: 236 GQGVADVLFGDYGFSGKLARTWFKSADQ-LPMNV-------------------------G 135 G +A++LFG SG L T K+ D +P+ Sbjct: 600 GTAIANILFGKANPSGHLPFTIAKTDDDYIPIETYSPSSGEPEDNHLVENDLLVDYRYFE 659 Query: 134 DKHYDPLFPFGFGLT 90 +K+ +P + FG+GL+ Sbjct: 660 EKNIEPRYAFGYGLS 674
>NUP62_MOUSE (Q63850) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)| Length = 526 Score = 32.0 bits (71), Expect = 1.4 Identities = 29/120 (24%), Positives = 47/120 (39%) Frame = +1 Query: 214 STSATPWPSEPGSHAATNASMALMYGSTTSGLPEMSXXXXXXXXXXFWITEGPGAGIVRF 393 +T+ P+ AAT ++ + ++ S + P S P AG + F Sbjct: 200 TTAGATQPAAAAPTAATTSAGSTLFASIAAA-PASSSATGLSLPAPVTTAATPSAGTLGF 258 Query: 394 RLSPNVSAYGGSPTTTMA*SYLPLSTAALSGFSEKTTSVLGSTVDLIAERIVVPAVLSLP 573 L +A G S T+T + +TAA + S TT S L++ A +LP Sbjct: 259 SLKAPGAAPGASTTSTTTTTTTTTTTAAAAAASTTTTGFALSLKPLVSAGPSSVAATALP 318
>Y2036_BORPE (Q7VWZ5) UPF0225 protein BP2036| Length = 133 Score = 31.6 bits (70), Expect = 1.8 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = -2 Query: 265 SSPRGCPARRARAWPTCC 212 SSP GCP + RA+P CC Sbjct: 6 SSPAGCPCGKPRAYPDCC 23
>ATG26_YARLI (Q6C8M8) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)| (Autophagy-related protein 26) Length = 1424 Score = 30.4 bits (67), Expect = 4.1 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +1 Query: 187 FPENP*SPNSTSATPWPSEPGSHAATNASMALMYGSTTSGLP 312 FP P +P S P+ PG HA +++ YG+TT G P Sbjct: 535 FPSAPPTPGSQ-----PTTPGVHAPGSSTPGGSYGTTTPGTP 571
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 30.4 bits (67), Expect = 4.1 Identities = 19/58 (32%), Positives = 22/58 (37%) Frame = +3 Query: 162 RLEPRPRQLPGEPVVAEQHVGHALALRAGQPRGDERVHGADVRLHHQRPAGDEHHHAP 335 RL P PR P P + A G D RV + L+H P HHH P Sbjct: 944 RLTPSPRGGPFNPGSGGPLPASSPATFDGPSPPDTRVGSREKSLYHSGPLPPAHHHPP 1001
>Y594_MYCLE (Q49682) Hypothetical UPF0051 protein ML0594| Length = 392 Score = 30.0 bits (66), Expect = 5.3 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 3/34 (8%) Frame = +3 Query: 351 VLDHRGAGRRDRQVQVVAE---RLSVRWLADHHD 443 V+DHRG+G V+ + E RL+V W+AD D Sbjct: 146 VIDHRGSGTYADNVEFIVEAAARLTVVWIADWAD 179
>CBPY_SCHPO (O13849) Carboxypeptidase Y precursor (EC 3.4.16.5) (CPY)| Length = 1002 Score = 29.6 bits (65), Expect = 6.9 Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 1/77 (1%) Frame = +3 Query: 141 VHRQLVRRLEPRP-RQLPGEPVVAEQHVGHALALRAGQPRGDERVHGADVRLHHQRPAGD 317 +H + + P P PGE + H L + G E G + + HH+ P Sbjct: 316 MHHEPGEHMPPPPMHHEPGEHMPPPPFKHHELE----EHEGPEHHRGPEDKEHHKGPKDK 371 Query: 318 EHHHAPDALAHVLDHRG 368 EHH P H H+G Sbjct: 372 EHHKGPKDKEH---HKG 385
>MEP1B_RAT (P28826) Meprin A beta-subunit precursor (EC 3.4.24.18)| (Endopeptidase-2) Length = 704 Score = 24.6 bits (52), Expect(2) = 8.5 Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 4/27 (14%) Frame = -1 Query: 398 NLNLTIPAPGP----SVIQNVCKSVRC 330 +LN T PGP S + N C V C Sbjct: 590 HLNSTAAVPGPVPTTSTVHNACSEVEC 616 Score = 23.1 bits (48), Expect(2) = 8.5 Identities = 8/19 (42%), Positives = 8/19 (42%) Frame = -2 Query: 349 CARASGAWWCSSPAGRWWW 293 C G C PAG WW Sbjct: 622 CTLQEGRAECKCPAGEDWW 640
>Y3385_BORBR (Q7WH25) UPF0225 protein BB3385| Length = 133 Score = 29.3 bits (64), Expect = 9.1 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -2 Query: 265 SSPRGCPARRARAWPTCC 212 SSP CP + RA+P CC Sbjct: 6 SSPAACPCGKPRAYPDCC 23
>Y1723_BORPA (Q7W9N2) UPF0225 protein BPP1723| Length = 133 Score = 29.3 bits (64), Expect = 9.1 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -2 Query: 265 SSPRGCPARRARAWPTCC 212 SSP CP + RA+P CC Sbjct: 6 SSPAACPCGKPRAYPDCC 23
>Y3645_MYCBO (P65088) Hypothetical protein Mb3645c| Length = 103 Score = 29.3 bits (64), Expect = 9.1 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 6/56 (10%) Frame = -1 Query: 524 TVDPSTEVVFSENPDSAAVDSGKYDYAIVVVGEP------PYAETFGDNLNLTIPA 375 TV P V + + D+AAVD+ A +GE PY F D LN+ + A Sbjct: 6 TVQPERLGVLASHHDNAAVDASSGVEAAAGLGESVAITHGPYCSQFNDTLNVYLTA 61
>Y3615_MYCTU (P65087) Hypothetical protein Rv3615c/MT3717| Length = 103 Score = 29.3 bits (64), Expect = 9.1 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 6/56 (10%) Frame = -1 Query: 524 TVDPSTEVVFSENPDSAAVDSGKYDYAIVVVGEP------PYAETFGDNLNLTIPA 375 TV P V + + D+AAVD+ A +GE PY F D LN+ + A Sbjct: 6 TVQPERLGVLASHHDNAAVDASSGVEAAAGLGESVAITHGPYCSQFNDTLNVYLTA 61
>ACPD_VIBPA (Q87PP9) Putative acyl carrier protein phosphodiesterase (EC| 3.1.4.14) (ACP phosphodiesterase) Length = 194 Score = 29.3 bits (64), Expect = 9.1 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = -1 Query: 215 LFGDYGFSGKLARTWFKSADQLPMNVGDKHYDPLFPFGFGLTT 87 + GDY S KL + K+ DQ + V D +PL F + T Sbjct: 11 ILGDYSQSNKLVEDFIKNVDQDKLTVRDLAANPLPVLDFAVAT 53
>LX15B_MOUSE (O35936) Arachidonate 15-lipoxygenase type II (EC 1.13.11.33)| (15-LOX-2) (8S-lipoxygenase) (8S-LOX) Length = 677 Score = 29.3 bits (64), Expect = 9.1 Identities = 15/55 (27%), Positives = 29/55 (52%) Frame = -1 Query: 584 QGQTGNDKTAGTTILSAIKSTVDPSTEVVFSENPDSAAVDSGKYDYAIVVVGEPP 420 +G G + + ++L ++ V T V+F+ + AAV SG++D + + PP Sbjct: 519 EGFLGRESSGMPSLLDTREALVQYITMVIFTCSAKHAAVSSGQFDSCVWMPNLPP 573
>COPZ2_HUMAN (Q9P299) Coatomer subunit zeta-2 (Zeta-2 coat protein) (Zeta-2 COP)| Length = 210 Score = 29.3 bits (64), Expect = 9.1 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = +3 Query: 156 VRRLEPRPRQLPGEPVVAEQHVGHALALRAGQPRG 260 ++R E PR PGE A Q G A RAG+P G Sbjct: 1 MQRPEAWPRPHPGEGAAAAQAGGPAPPARAGEPSG 35 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,604,052 Number of Sequences: 219361 Number of extensions: 1584279 Number of successful extensions: 6146 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 5766 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6097 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)