ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24f15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016405.1| Zea mays clone Contig238 mRNA sequence 200 4e-48
2gb|AY104890.1| Zea mays PCO071167 mRNA sequence 200 4e-48
3dbj|AK120839.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 5e-41
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 121 3e-24
5gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare str... 121 3e-24
6gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare str... 121 3e-24
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
8ref|NM_197762.1| Oryza sativa (japonica cultivar-group) putative... 90 9e-15
9dbj|AK072479.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 9e-15
10gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 geno... 78 4e-11
11dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
12gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 78 4e-11
13emb|AJ458315.1|CNU458315 Cocos nucifera microsatellite DNA, clon... 48 0.032
14dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 44 0.50
15gb|AC154505.3| Mus musculus BAC clone RP24-92J14 from chromosome... 44 0.50
16emb|AL732469.8| Mouse DNA sequence from clone RP23-434B15 on chr... 44 0.50
17emb|AL445228.13| Human DNA sequence from clone RP11-382D12 on ch... 42 2.0
18gb|AC183494.1| Brassica oleracea Contig C, complete sequence 42 2.0
19gb|AC114552.16| Mus musculus chromosome 12, clone RP23-349L22, c... 42 2.0
20gb|AC142112.3| Mus musculus BAC clone RP24-87H1 from 12, complet... 42 2.0
21gb|AC134902.7| Mus musculus BAC clone RP23-309A11 from 12, compl... 42 2.0
22ref|XM_510008.1| PREDICTED: Pan troglodytes similar to MAX prote... 40 7.9
23gb|AC099629.6| Mus musculus chromosome 15, clone RP24-86K17, com... 40 7.9
24gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 7.9
25gb|BC054988.1| Xenopus laevis hypothetical protein MGC64541, mRN... 40 7.9
26ref|XM_546313.2| PREDICTED: Canis familiaris similar to GrpE pro... 40 7.9
27emb|X66867.1|HSMAXG H.sapiens max gene 40 7.9
28ref|NM_145112.1| Homo sapiens MYC associated factor X (MAX), tra... 40 7.9
29ref|NM_002382.3| Homo sapiens MYC associated factor X (MAX), tra... 40 7.9
30ref|NM_145113.1| Homo sapiens MYC associated factor X (MAX), tra... 40 7.9
31emb|AL683834.9| Human DNA sequence from clone RP11-159F17 on chr... 40 7.9
32gb|AC154784.2| Mus musculus BAC clone RP23-90B4 from chromosome ... 40 7.9
33gb|BC036092.1| Homo sapiens MYC associated factor X, mRNA (cDNA ... 40 7.9
34gb|AC020912.6| Homo sapiens chromosome 19 clone CTD-2583G20, com... 40 7.9
35emb|CR619150.1| full-length cDNA clone CS0DI059YB06 of Placenta ... 40 7.9
36emb|CR607503.1| full-length cDNA clone CS0DB009YH16 of Neuroblas... 40 7.9
37emb|CR600362.1| full-length cDNA clone CS0DF013YF21 of Fetal bra... 40 7.9
38gb|AC020952.5| Homo sapiens chromosome 19 clone LLNLR-263F3, com... 40 7.9
39gb|AF548005.1| Azoarcus evansii aerobic benzoate degradation gen... 40 7.9
40gb|AC012157.21| Homo sapiens 12 BAC RP11-493P1 (Roswell Park Can... 40 7.9
41gb|AC007912.6|AC007912 Homo sapiens chromosome , clone RP11-8A1,... 40 7.9
42gb|BC025685.1| Homo sapiens MYC associated factor X, transcript ... 40 7.9
43gb|BC004516.2| Homo sapiens MYC associated factor X, transcript ... 40 7.9
44gb|BC003525.1| Homo sapiens MYC associated factor X, transcript ... 40 7.9
45emb|AL139022.4|CNS01DX4 Human chromosome 14 DNA sequence BAC R-8... 40 7.9
46gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 7.9
47emb|AL833643.1|HSM804956 Homo sapiens mRNA; cDNA DKFZp686O0679 (... 40 7.9
48gb|BC027924.1| Homo sapiens MYC associated factor X, mRNA (cDNA ... 40 7.9
49dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 7.9
50gb|AC154519.2| Mus musculus BAC clone RP23-216L13 from chromosom... 40 7.9 
>gb|BT016405.1| Zea mays clone Contig238 mRNA sequence
          Length = 1161

 Score =  200 bits (101), Expect = 4e-48
 Identities = 266/321 (82%)
 Strand = Plus / Minus

                                                                       
Query: 254 gtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctcctggcac 313
           ||||||||||||||  ||| ||||||| |  |||||||| || || || ||||| |||||
Sbjct: 874 gtaaggcacaatgtacttcttcatgtcacctttggagataccaagatgacctcccggcac 815

                                                                       
Query: 314 cgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagtcttcctg 373
            ||||| ||||| || ||||| || || ||||| | ||||| ||| ||||||||||||| 
Sbjct: 814 agacacaaacttcacccgccctgcttcatccagtgtcttcaaaccaatccagtcttcctc 755

                                                                       
Query: 374 atacagctttgtctgctgaggaggtaggactggctcaaaggctccatcagggtaataacc 433
           |||||| || |||| |||||| ||||| ||||| |||||||||||||||||||| |||||
Sbjct: 754 atacagtttcgtcttctgaggtggtagaactggatcaaaggctccatcagggtagtaacc 695

                                                                       
Query: 434 aaaccacgaagtttcccggggtatgacgacgatatcattctcaaacatgatcaatactaa 493
           |||||| |  ||||| || ||||| | |||   ||||| || |||||| ||||  || ||
Sbjct: 694 aaaccatgccgtttctcgtggtatcaggactgcatcatcctgaaacataatcagaaccaa 635

                                                                       
Query: 494 gttctctaagctgctgaacctttccttgtaggtagcatttctttcacctggtatctcatt 553
            ||||||||||| ||||| |||||||||||||| |||||||||| | |||| || |||||
Sbjct: 634 attctctaagctactgaatctttccttgtaggtggcatttcttttatctggaatttcatt 575

                                
Query: 554 gttaagtttcggaagaaacct 574
           ||||||||| |||||||||||
Sbjct: 574 gttaagttttggaagaaacct 554
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>gb|AY104890.1| Zea mays PCO071167 mRNA sequence
          Length = 1683

 Score =  200 bits (101), Expect = 4e-48
 Identities = 266/321 (82%)
 Strand = Plus / Minus

                                                                       
Query: 254 gtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctcctggcac 313
           ||||||||||||||  ||| ||||||| |  |||||||| || || || ||||| |||||
Sbjct: 944 gtaaggcacaatgtacttcttcatgtcacctttggagataccaagatgacctcccggcac 885

                                                                       
Query: 314 cgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagtcttcctg 373
            ||||| ||||| || ||||| || || ||||| | ||||| ||| ||||||||||||| 
Sbjct: 884 agacacaaacttcacccgccctgcttcatccagtgtcttcaaaccaatccagtcttcctc 825

                                                                       
Query: 374 atacagctttgtctgctgaggaggtaggactggctcaaaggctccatcagggtaataacc 433
           |||||| || |||| |||||| ||||| ||||| |||||||||||||||||||| |||||
Sbjct: 824 atacagtttcgtcttctgaggtggtagaactggatcaaaggctccatcagggtagtaacc 765

                                                                       
Query: 434 aaaccacgaagtttcccggggtatgacgacgatatcattctcaaacatgatcaatactaa 493
           |||||| |  ||||| || ||||| | |||   ||||| || |||||| ||||  || ||
Sbjct: 764 aaaccatgccgtttctcgtggtatcaggactgcatcatcctgaaacataatcagaaccaa 705

                                                                       
Query: 494 gttctctaagctgctgaacctttccttgtaggtagcatttctttcacctggtatctcatt 553
            ||||||||||| ||||| |||||||||||||| |||||||||| | |||| || |||||
Sbjct: 704 attctctaagctactgaatctttccttgtaggtggcatttcttttatctggaatttcatt 645

                                
Query: 554 gttaagtttcggaagaaacct 574
           ||||||||| |||||||||||
Sbjct: 644 gttaagttttggaagaaacct 624
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>dbj|AK120839.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022G01, full
           insert sequence
          Length = 1229

 Score =  176 bits (89), Expect = 5e-41
 Identities = 266/325 (81%)
 Strand = Plus / Minus

                                                                       
Query: 247 ccttcaagtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctc 306
           |||||||||| ||||| ||||  ||| |||||||  | ||||| || |||||||| || |
Sbjct: 937 ccttcaagtagggcacgatgtacttcatcatgtcagtcttggaaatacccaggtgccccc 878

                                                                       
Query: 307 ctggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagt 366
           ||||||| |||||||| || |||| |||  | || ||||| | ||| ||||| |||||||
Sbjct: 877 ctggcacggacacgaatttcactctcccctcatcatccagcgtcttgagaccaatccagt 818

                                                                       
Query: 367 cttcctgatacagctttgtctgctgaggaggtaggactggctcaaaggctccatcagggt 426
           | |||   ||||||||||||| |||||| || ||||| || || ||  ||||||| || |
Sbjct: 817 cctccatgtacagctttgtcttctgagggggcaggacaggatcgaaacctccatctggat 758

                                                                       
Query: 427 aataaccaaaccacgaagtttcccggggtatgacgacgatatcattctcaaacatgatca 486
           | ||||||||||| |  |||||||| ||||| | |||    |||| || ||||||||| |
Sbjct: 757 agtaaccaaaccatgctgtttcccgaggtatcaagacagcgtcatcctgaaacatgatta 698

                                                                       
Query: 487 atactaagttctctaagctgctgaacctttccttgtaggtagcatttctttcacctggta 546
           |||| || |||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 697 ataccaaattctctaagctgctaaacctttccttgtaggtggcatttctttcacctggta 638

                                    
Query: 547 tctcattgttaagtttcggaagaaa 571
            |||||||||||| || ||||||||
Sbjct: 637 actcattgttaagctttggaagaaa 613
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  121 bits (61), Expect = 3e-24
 Identities = 85/93 (91%)
 Strand = Plus / Minus

                                                                         
Query: 479   catgatcaatactaagttctctaagctgctgaacctttccttgtaggtagcatttctttc 538
             |||||| ||||| || |||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 87615 catgattaataccaaattctctaagctgctaaacctttccttgtaggtggcatttctttc 87556

                                              
Query: 539   acctggtatctcattgttaagtttcggaagaaa 571
             |||||||| |||||||||||| || ||||||||
Sbjct: 87555 acctggtaactcattgttaagctttggaagaaa 87523



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                         
Query: 247   ccttcaagtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctc 306
             |||||||||| ||||| ||||  ||| |||||||  | ||||| || |||||||| || |
Sbjct: 88575 ccttcaagtagggcacgatgtacttcatcatgtcagtcttggaaatacccaggtgccccc 88516

                                                                         
Query: 307   ctggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagt 366
             ||||||| |||||||| || |||| |||  | || ||||| | ||| ||||| |||||||
Sbjct: 88515 ctggcacggacacgaatttcactctcccctcatcatccagcgtcttgagaccaatccagt 88456

                                    
Query: 367   cttcctgatacagctttgtctgc 389
             | |||   |||||||||||||||
Sbjct: 88455 cctccatgtacagctttgtctgc 88433
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>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAb0079B22, from chromosome 3, complete sequence
          Length = 156933

 Score =  121 bits (61), Expect = 3e-24
 Identities = 85/93 (91%)
 Strand = Plus / Minus

                                                                         
Query: 479   catgatcaatactaagttctctaagctgctgaacctttccttgtaggtagcatttctttc 538
             |||||| ||||| || |||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 21615 catgattaataccaaattctctaagctgctaaacctttccttgtaggtggcatttctttc 21556

                                              
Query: 539   acctggtatctcattgttaagtttcggaagaaa 571
             |||||||| |||||||||||| || ||||||||
Sbjct: 21555 acctggtaactcattgttaagctttggaagaaa 21523



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                         
Query: 247   ccttcaagtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctc 306
             |||||||||| ||||| ||||  ||| |||||||  | ||||| || |||||||| || |
Sbjct: 22575 ccttcaagtagggcacgatgtacttcatcatgtcagtcttggaaatacccaggtgccccc 22516

                                                                         
Query: 307   ctggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagt 366
             ||||||| |||||||| || |||| |||  | || ||||| | ||| ||||| |||||||
Sbjct: 22515 ctggcacggacacgaatttcactctcccctcatcatccagcgtcttgagaccaatccagt 22456

                                    
Query: 367   cttcctgatacagctttgtctgc 389
             | |||   |||||||||||||||
Sbjct: 22455 cctccatgtacagctttgtctgc 22433
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>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0079B22, from chromosome 3, complete sequence
          Length = 125217

 Score =  121 bits (61), Expect = 3e-24
 Identities = 85/93 (91%)
 Strand = Plus / Plus

                                                                         
Query: 479   catgatcaatactaagttctctaagctgctgaacctttccttgtaggtagcatttctttc 538
             |||||| ||||| || |||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 37603 catgattaataccaaattctctaagctgctaaacctttccttgtaggtggcatttctttc 37662

                                              
Query: 539   acctggtatctcattgttaagtttcggaagaaa 571
             |||||||| |||||||||||| || ||||||||
Sbjct: 37663 acctggtaactcattgttaagctttggaagaaa 37695



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Plus

                                                                         
Query: 247   ccttcaagtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctc 306
             |||||||||| ||||| ||||  ||| |||||||  | ||||| || |||||||| || |
Sbjct: 36643 ccttcaagtagggcacgatgtacttcatcatgtcagtcttggaaatacccaggtgccccc 36702

                                                                         
Query: 307   ctggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagt 366
             ||||||| |||||||| || |||| |||  | || ||||| | ||| ||||| |||||||
Sbjct: 36703 ctggcacggacacgaatttcactctcccctcatcatccagcgtcttgagaccaatccagt 36762

                                    
Query: 367   cttcctgatacagctttgtctgc 389
             | |||   |||||||||||||||
Sbjct: 36763 cctccatgtacagctttgtctgc 36785
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             complete sequence
          Length = 36192742

 Score =  121 bits (61), Expect = 3e-24
 Identities = 85/93 (91%)
 Strand = Plus / Minus

                                                                         
Query: 479   catgatcaatactaagttctctaagctgctgaacctttccttgtaggtagcatttctttc 538
             |||||| ||||| || |||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 87615 catgattaataccaaattctctaagctgctaaacctttccttgtaggtggcatttctttc 87556

                                              
Query: 539   acctggtatctcattgttaagtttcggaagaaa 571
             |||||||| |||||||||||| || ||||||||
Sbjct: 87555 acctggtaactcattgttaagctttggaagaaa 87523



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                         
Query: 247   ccttcaagtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctc 306
             |||||||||| ||||| ||||  ||| |||||||  | ||||| || |||||||| || |
Sbjct: 88575 ccttcaagtagggcacgatgtacttcatcatgtcagtcttggaaatacccaggtgccccc 88516

                                                                         
Query: 307   ctggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagt 366
             ||||||| |||||||| || |||| |||  | || ||||| | ||| ||||| |||||||
Sbjct: 88515 ctggcacggacacgaatttcactctcccctcatcatccagcgtcttgagaccaatccagt 88456

                                    
Query: 367   cttcctgatacagctttgtctgc 389
             | |||   |||||||||||||||
Sbjct: 88455 cctccatgtacagctttgtctgc 88433
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>ref|NM_197762.1| Oryza sativa (japonica cultivar-group) putative palmitoyl-protein
           thioesterase (OSJNBa0027P10.1), mRNA
          Length = 1212

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 90/105 (85%)
 Strand = Plus / Minus

                                                                       
Query: 473 ctcaaacatgatcaatactaagttctctaagctgctgaacctttccttgtaggtagcatt 532
           ||||||||| ||||||||||  || || | ||||||||| ||||  || || ||||||||
Sbjct: 690 ctcaaacataatcaatactagattttccaggctgctgaatctttgtttatacgtagcatt 631

                                                        
Query: 533 tctttcacctggtatctcattgttaagtttcggaagaaacctgca 577
           |||||||| |||||||||||||||||| || ||||||||| ||||
Sbjct: 630 tctttcacttggtatctcattgttaagctttggaagaaacttgca 586



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                       
Query: 304 ctcctggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatcc 363
           |||||||||| || |||||||| || ||||| ||||| ||||  |||||||  |||||||
Sbjct: 859 ctcctggcactgatacgaacttaacacgcccagcctcctccaaagccttcaagccgatcc 800

               
Query: 364 agtc 367
           ||||
Sbjct: 799 agtc 796
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>dbj|AK072479.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023126M16, full
           insert sequence
          Length = 1353

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 90/105 (85%)
 Strand = Plus / Minus

                                                                       
Query: 473 ctcaaacatgatcaatactaagttctctaagctgctgaacctttccttgtaggtagcatt 532
           ||||||||| ||||||||||  || || | ||||||||| ||||  || || ||||||||
Sbjct: 782 ctcaaacataatcaatactagattttccaggctgctgaatctttgtttatacgtagcatt 723

                                                        
Query: 533 tctttcacctggtatctcattgttaagtttcggaagaaacctgca 577
           |||||||| |||||||||||||||||| || ||||||||| ||||
Sbjct: 722 tctttcacttggtatctcattgttaagctttggaagaaacttgca 678



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 98/119 (82%)
 Strand = Plus / Minus

                                                                        
Query: 249  ttcaagtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctcct 308
            |||||||| ||||| ||||  ||| || |||| ||  ||||||||| |||||| ||||||
Sbjct: 1006 ttcaagtatggcactatgtacttcttcgtgtcacttctggagatgctcaggtgacctcct 947

                                                                       
Query: 309  ggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagtc 367
            ||||| || |||||||| || ||||| ||||| ||||  |||||||  |||||||||||
Sbjct: 946  ggcactgatacgaacttaacacgcccagcctcctccaaagccttcaagccgatccagtc 888
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>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete
             sequence
          Length = 141307

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                         
Query: 503   gctgctgaacctttccttgtaggtagcatttctttcacctggtatctcattgttaagttt 562
             ||||||||| ||||  || || |||||||||||||||| |||||||||||||||||| ||
Sbjct: 16130 gctgctgaatctttgtttatacgtagcatttctttcacttggtatctcattgttaagctt 16071

                            
Query: 563   cggaagaaacctgca 577
              ||||||||| ||||
Sbjct: 16070 tggaagaaacttgca 16056



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 98/119 (82%)
 Strand = Plus / Minus

                                                                         
Query: 249   ttcaagtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctcct 308
             |||||||| ||||| ||||  ||| || |||| ||  ||||||||| |||||| ||||||
Sbjct: 17009 ttcaagtatggcactatgtacttcttcgtgtcacttctggagatgctcaggtgacctcct 16950

                                                                        
Query: 309   ggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagtc 367
             ||||| || |||||||| || ||||| ||||| ||||  |||||||  |||||||||||
Sbjct: 16949 ggcactgatacgaacttaacacgcccagcctcctccaaagccttcaagccgatccagtc 16891
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                            
Query: 503      gctgctgaacctttccttgtaggtagcatttctttcacctggtatctcattgttaagttt 562
                ||||||||| ||||  || || |||||||||||||||| |||||||||||||||||| ||
Sbjct: 21701447 gctgctgaatctttgtttatacgtagcatttctttcacttggtatctcattgttaagctt 21701388

                               
Query: 563      cggaagaaacctgca 577
                 ||||||||| ||||
Sbjct: 21701387 tggaagaaacttgca 21701373



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 98/119 (82%)
 Strand = Plus / Minus

                                                                            
Query: 249      ttcaagtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctcct 308
                |||||||| ||||| ||||  ||| || |||| ||  ||||||||| |||||| ||||||
Sbjct: 21702326 ttcaagtatggcactatgtacttcttcgtgtcacttctggagatgctcaggtgacctcct 21702267

                                                                           
Query: 309      ggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagtc 367
                ||||| || |||||||| || ||||| ||||| ||||  |||||||  |||||||||||
Sbjct: 21702266 ggcactgatacgaacttaacacgcccagcctcctccaaagccttcaagccgatccagtc 21702208
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                            
Query: 503      gctgctgaacctttccttgtaggtagcatttctttcacctggtatctcattgttaagttt 562
                ||||||||| ||||  || || |||||||||||||||| |||||||||||||||||| ||
Sbjct: 21713110 gctgctgaatctttgtttatacgtagcatttctttcacttggtatctcattgttaagctt 21713051

                               
Query: 563      cggaagaaacctgca 577
                 ||||||||| ||||
Sbjct: 21713050 tggaagaaacttgca 21713036



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 98/119 (82%)
 Strand = Plus / Minus

                                                                            
Query: 249      ttcaagtaaggcacaatgtgtttcctcatgtcgctgttggagatgcccaggtggcctcct 308
                |||||||| ||||| ||||  ||| || |||| ||  ||||||||| |||||| ||||||
Sbjct: 21713989 ttcaagtatggcactatgtacttcttcgtgtcacttctggagatgctcaggtgacctcct 21713930

                                                                           
Query: 309      ggcaccgacacgaacttgactcgcccggcctcgtccagggccttcagaccgatccagtc 367
                ||||| || |||||||| || ||||| ||||| ||||  |||||||  |||||||||||
Sbjct: 21713929 ggcactgatacgaacttaacacgcccagcctcctccaaagccttcaagccgatccagtc 21713871
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>emb|AJ458315.1|CNU458315 Cocos nucifera microsatellite DNA, clone CnCirC12
          Length = 495

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 123 aacatgattgtggatcatcatgtt 146
           ||||||||||||||||||||||||
Sbjct: 316 aacatgattgtggatcatcatgtt 339
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 328     ctcgcccggcctcgtccagggc 349
               ||||||||||||||||||||||
Sbjct: 2495863 ctcgcccggcctcgtccagggc 2495884



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 334    cggcctcgtccagggccttc 353
              ||||||||||||||||||||
Sbjct: 819191 cggcctcgtccagggccttc 819210
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>gb|AC154505.3| Mus musculus BAC clone RP24-92J14 from chromosome 13, complete sequence
          Length = 199707

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 124    acatgattgtggatcatcatgt 145
              ||||||||||||||||||||||
Sbjct: 131278 acatgattgtggatcatcatgt 131299
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>emb|AL732469.8| Mouse DNA sequence from clone RP23-434B15 on chromosome X, complete
             sequence
          Length = 197111

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 13    ccttngatttttgtttttacagttg 37
             |||| ||||||||||||||||||||
Sbjct: 65383 cctttgatttttgtttttacagttg 65407
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>emb|AL445228.13| Human DNA sequence from clone RP11-382D12 on chromosome 1 Contains a
             novel gene, the 5' end of the C1orf21 gene for chromosome
             1 open reading frame 21 and a CpG island, complete
             sequence
          Length = 116252

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 491   taagttctctaagctgctgaacctt 515
             ||||||||||||| |||||||||||
Sbjct: 74106 taagttctctaaggtgctgaacctt 74082
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>gb|AC183494.1| Brassica oleracea Contig C, complete sequence
          Length = 285752

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 531    tttctttcacctggtatctcattgttaag 559
              |||||||  ||||||||||||||||||||
Sbjct: 171672 tttctttggcctggtatctcattgttaag 171700
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>gb|AC114552.16| Mus musculus chromosome 12, clone RP23-349L22, complete sequence
          Length = 197585

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 376  acagctttgtctgctgaggag 396
            |||||||||||||||||||||
Sbjct: 8308 acagctttgtctgctgaggag 8288
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>gb|AC142112.3| Mus musculus BAC clone RP24-87H1 from 12, complete sequence
          Length = 229085

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 376    acagctttgtctgctgaggag 396
              |||||||||||||||||||||
Sbjct: 224259 acagctttgtctgctgaggag 224239
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>gb|AC134902.7| Mus musculus BAC clone RP23-309A11 from 12, complete sequence
          Length = 228741

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 376  acagctttgtctgctgaggag 396
            |||||||||||||||||||||
Sbjct: 1463 acagctttgtctgctgaggag 1443
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>ref|XM_510008.1| PREDICTED: Pan troglodytes similar to MAX protein isoform a;
            myc-associated factor X; helix-loop-helix zipper protein
            (LOC452972), mRNA
          Length = 3374

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  tgcccaggtggcctcctggc 311
            ||||||||||||||||||||
Sbjct: 3116 tgcccaggtggcctcctggc 3135
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>gb|AC099629.6| Mus musculus chromosome 15, clone RP24-86K17, complete sequence
          Length = 175809

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   tgttggagatgcccaggtgg 302
             ||||||||||||||||||||
Sbjct: 53894 tgttggagatgcccaggtgg 53875
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 490    ctaagttctctaagctgctg 509
              ||||||||||||||||||||
Sbjct: 987219 ctaagttctctaagctgctg 987238
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>gb|BC054988.1| Xenopus laevis hypothetical protein MGC64541, mRNA (cDNA clone
           MGC:64541 IMAGE:6878981), complete cds
          Length = 1808

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 541 ctggtatctcattgttaagt 560
           ||||||||||||||||||||
Sbjct: 496 ctggtatctcattgttaagt 477
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>ref|XM_546313.2| PREDICTED: Canis familiaris similar to GrpE protein homolog 2,
           mitochondrial precursor (Mt-GrpE#2) (LOC489195), mRNA
          Length = 1024

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 541 ctggtatctcattgttaagt 560
           ||||||||||||||||||||
Sbjct: 411 ctggtatctcattgttaagt 392
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>emb|X66867.1|HSMAXG H.sapiens max gene
          Length = 3189

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  tgcccaggtggcctcctggc 311
            ||||||||||||||||||||
Sbjct: 2208 tgcccaggtggcctcctggc 2227
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>ref|NM_145112.1| Homo sapiens MYC associated factor X (MAX), transcript variant 2,
            mRNA
          Length = 2041

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  tgcccaggtggcctcctggc 311
            ||||||||||||||||||||
Sbjct: 1009 tgcccaggtggcctcctggc 1028
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>ref|NM_002382.3| Homo sapiens MYC associated factor X (MAX), transcript variant 1,
            mRNA
          Length = 2068

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  tgcccaggtggcctcctggc 311
            ||||||||||||||||||||
Sbjct: 1036 tgcccaggtggcctcctggc 1055
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>ref|NM_145113.1| Homo sapiens MYC associated factor X (MAX), transcript variant 3,
            mRNA
          Length = 2169

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  tgcccaggtggcctcctggc 311
            ||||||||||||||||||||
Sbjct: 1137 tgcccaggtggcctcctggc 1156
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>emb|AL683834.9| Human DNA sequence from clone RP11-159F17 on chromosome 10 Contains
             part of the GRID1 gene for glutamate receptor (ionotropic)
             delta 1, complete sequence
          Length = 106580

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   ctccccgatggcgtgccagg 213
             ||||||||||||||||||||
Sbjct: 76593 ctccccgatggcgtgccagg 76612
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>gb|AC154784.2| Mus musculus BAC clone RP23-90B4 from chromosome 9, complete sequence
          Length = 176753

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     atttttgtttttacagttga 38
              ||||||||||||||||||||
Sbjct: 161821 atttttgtttttacagttga 161840
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>gb|BC036092.1| Homo sapiens MYC associated factor X, mRNA (cDNA clone MGC:33818
            IMAGE:5299106), complete cds
          Length = 3171

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  tgcccaggtggcctcctggc 311
            ||||||||||||||||||||
Sbjct: 2266 tgcccaggtggcctcctggc 2285
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>gb|AC020912.6| Homo sapiens chromosome 19 clone CTD-2583G20, complete sequence
          Length = 163225

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 7      atttaaccttngatttttgtttttaca 33
              ||||||| || ||||||||||||||||
Sbjct: 155696 atttaacattcgatttttgtttttaca 155670
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>emb|CR619150.1| full-length cDNA clone CS0DI059YB06 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1673

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 292 tgcccaggtggcctcctggc 311
           ||||||||||||||||||||
Sbjct: 738 tgcccaggtggcctcctggc 757
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>emb|CR607503.1| full-length cDNA clone CS0DB009YH16 of Neuroblastoma Cot
            10-normalized of Homo sapiens (human)
          Length = 1867

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  tgcccaggtggcctcctggc 311
            ||||||||||||||||||||
Sbjct: 1004 tgcccaggtggcctcctggc 1023
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>emb|CR600362.1| full-length cDNA clone CS0DF013YF21 of Fetal brain of Homo sapiens
           (human)
          Length = 1695

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 292 tgcccaggtggcctcctggc 311
           ||||||||||||||||||||
Sbjct: 866 tgcccaggtggcctcctggc 885
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>gb|AC020952.5| Homo sapiens chromosome 19 clone LLNLR-263F3, complete sequence
          Length = 42271

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 7     atttaaccttngatttttgtttttaca 33
             ||||||| || ||||||||||||||||
Sbjct: 11610 atttaacattcgatttttgtttttaca 11584
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>gb|AF548005.1| Azoarcus evansii aerobic benzoate degradation gene cluster, complete
            sequence
          Length = 19112

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 177  cccatcagcccgagcgcctc 196
            ||||||||||||||||||||
Sbjct: 2144 cccatcagcccgagcgcctc 2163
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>gb|AC012157.21| Homo sapiens 12 BAC RP11-493P1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 165833

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    ctgttggagatgcccaggtg 301
              ||||||||||||||||||||
Sbjct: 103174 ctgttggagatgcccaggtg 103193
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>gb|AC007912.6|AC007912 Homo sapiens chromosome , clone RP11-8A1, complete sequence
          Length = 171255

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  ctgttggagatgcccaggtg 301
            ||||||||||||||||||||
Sbjct: 3591 ctgttggagatgcccaggtg 3572
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>gb|BC025685.1| Homo sapiens MYC associated factor X, transcript variant 2, mRNA
            (cDNA clone MGC:36767 IMAGE:5205305), complete cds
          Length = 2023

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  tgcccaggtggcctcctggc 311
            ||||||||||||||||||||
Sbjct: 991  tgcccaggtggcctcctggc 1010
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>gb|BC004516.2| Homo sapiens MYC associated factor X, transcript variant 1, mRNA
            (cDNA clone MGC:11225 IMAGE:3937573), complete cds
          Length = 1566

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  tgcccaggtggcctcctggc 311
            ||||||||||||||||||||
Sbjct: 997  tgcccaggtggcctcctggc 1016
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>gb|BC003525.1| Homo sapiens MYC associated factor X, transcript variant 2, mRNA
           (cDNA clone MGC:10775 IMAGE:3607261), complete cds
          Length = 1963

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 292 tgcccaggtggcctcctggc 311
           ||||||||||||||||||||
Sbjct: 955 tgcccaggtggcctcctggc 974
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>emb|AL139022.4|CNS01DX4 Human chromosome 14 DNA sequence BAC R-840I19 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 190517

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   tgcccaggtggcctcctggc 311
             ||||||||||||||||||||
Sbjct: 30090 tgcccaggtggcctcctggc 30109
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 216     gcggcgagcgaagcggaggc 235
               ||||||||||||||||||||
Sbjct: 1231581 gcggcgagcgaagcggaggc 1231600
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>emb|AL833643.1|HSM804956 Homo sapiens mRNA; cDNA DKFZp686O0679 (from clone DKFZp686O0679)
          Length = 2116

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  tgcccaggtggcctcctggc 311
            ||||||||||||||||||||
Sbjct: 1132 tgcccaggtggcctcctggc 1151
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>gb|BC027924.1| Homo sapiens MYC associated factor X, mRNA (cDNA clone MGC:34679
            IMAGE:5309524), complete cds
          Length = 1982

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  tgcccaggtggcctcctggc 311
            ||||||||||||||||||||
Sbjct: 1001 tgcccaggtggcctcctggc 1020
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 333     ccggcctcgtccagggcctt 352
               ||||||||||||||||||||
Sbjct: 1367373 ccggcctcgtccagggcctt 1367354
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>gb|AC154519.2| Mus musculus BAC clone RP23-216L13 from chromosome 9, complete sequence
          Length = 209719

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     atttttgtttttacagttga 38
              ||||||||||||||||||||
Sbjct: 151117 atttttgtttttacagttga 151098


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,742,588
Number of Sequences: 3902068
Number of extensions: 5742588
Number of successful extensions: 133969
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 133599
Number of HSP's gapped (non-prelim): 367
length of query: 579
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 556
effective length of database: 17,143,297,704
effective search space: 9531673523424
effective search space used: 9531673523424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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