>SAP_HUMAN (P07602) Proactivator polypeptide precursor [Contains: Saposin A|
           (Protein A); Saposin B-Val; Saposin B (Sphingolipid
           activator protein 1) (SAP-1) (Cerebroside sulfate
           activator) (CSAct) (Dispersin) (Sulfatide/GM1
           activator); Saposin C (Co-beta-
          Length = 524

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -3

Query: 346 NTKLEIVGLLFKTCSKAKN-YEPQCKRLVLDYIPLIXVKTQTFLETTDVCFTTHAC 182
           +TK EI+  L K CS   + Y+ QC + V +Y P++       ++ + VC    AC
Sbjct: 427 STKQEILAALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGAC 482



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = -3

Query: 361 MXKDPNTKLEIVGLLFKTCS--KAKNYEPQCKRLVLDYIPLI-XVKTQTFLETTDVCFTT 191
           M KD  T+ EI+  L KTC      N    CK +V  Y+P+I  +         +VC   
Sbjct: 76  MLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSAL 135

Query: 190 HACKT 176
           + C++
Sbjct: 136 NLCES 140

>FER_STRGR (P13279) Ferredoxin|
          Length = 105

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -3

Query: 76 SYILLKHCQDMKPRSCVRLCPVQC 5
          +Y++ + C D+K ++C+  CPV C
Sbjct: 1  TYVIAQPCVDVKDKACIEECPVDC 24

>FER_MYCSM (P00215) Ferredoxin|
          Length = 106

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -3

Query: 76 SYILLKHCQDMKPRSCVRLCPVQC 5
          +Y++ + C D+K ++C+  CPV C
Sbjct: 1  TYVIAEPCVDVKDKACIEECPVDC 24

>SAP_RAT (P10960) Sulfated glycoprotein 1 precursor (SGP-1) (Prosaposin)|
          Length = 554

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -3

Query: 346 NTKLEIVGLLFKTCSKAKN-YEPQCKRLVLDYIPLIXVKTQTFLETTDVCFTTHAC 182
           +TK EI+  L K CS   + Y+ QC   V +Y PL+       ++ + VC     C
Sbjct: 457 STKEEILAALEKGCSFLPDPYQKQCDEFVAEYEPLLLEILVEVMDPSFVCSKIGVC 512

>FER_MYCTU (P64122) Ferredoxin|
          Length = 113

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 76 SYILLKHCQDMKPRSCVRLCPVQC 5
          +Y++   C D+  +SCV+ CPV C
Sbjct: 1  TYVIGSECVDVMDKSCVQECPVDC 24

>FER_MYCBO (P64123) Ferredoxin|
          Length = 113

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 76 SYILLKHCQDMKPRSCVRLCPVQC 5
          +Y++   C D+  +SCV+ CPV C
Sbjct: 1  TYVIGSECVDVMDKSCVQECPVDC 24

>SAP_BOVIN (P26779) Proactivator polypeptide precursor [Contains: Saposin A|
           (Protein A); Saposin B (Sphingolipid activator protein
           1) (SAP-1) (Cerebroside sulfate activator) (CSAct)
           (Dispersin) (Sulfatide/GM1 activator); Saposin C
           (Co-beta-glucosidase) (A
          Length = 525

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -3

Query: 346 NTKLEIVGLLFKTCSKAKN-YEPQCKRLVLDYIPLIXVKTQTFLETTDVCFTTHAC 182
           +TK +I+  L K CS   + Y  QC + V +Y P++       ++ + VC    AC
Sbjct: 428 STKEQILAALEKGCSFLPDQYRKQCDQFVTEYEPVLIEILVEVMDPSFVCLKIGAC 483



 Score = 28.9 bits (63), Expect = 3.2
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = -3

Query: 361 MXKDPNTKLEIVGLLFKTCS--KAKNYEPQCKRLVLDYIPLI--XVKTQTFLETTDVCFT 194
           + KD  T+ EI+  L +TC      N    CK +V  Y+P+I   +K Q      +VC  
Sbjct: 76  LLKDNATEQEILMYLERTCDWLPKPNMSASCKEIVDSYLPVILDMIKGQ-MSHPGEVCSA 134

Query: 193 THACKT 176
            + C++
Sbjct: 135 LNLCES 140

>FER_THET8 (P03942) Ferredoxin|
          Length = 78

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -3

Query: 73 YILLKHCQDMKPRSCVRLCPVQC 5
          +++ + C  +K +SCV +CPV+C
Sbjct: 2  HVICEPCIGVKDQSCVEVCPVEC 24

>FER_BACSC (Q45560) Ferredoxin 7Fe (Seven-iron ferredoxin)|
          Length = 77

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 76 SYILLKHCQDMKPRSCVRLCPVQC 5
          +Y++ + C   K  SCV +CPV C
Sbjct: 1  AYVITEPCIGTKDASCVEVCPVDC 24

>PSPB_HUMAN (P07988) Pulmonary surfactant-associated protein B precursor (SP-B)|
           (6 kDa protein) (Pulmonary surfactant-associated
           proteolipid SPL(Phe)) (18 kDa pulmonary-surfactant
           protein)
          Length = 381

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 283 PQCKRLVLDYIPLIXVKTQTFLETTDVCFTTHACKT 176
           PQC +++ DY PL+    Q   ++  +C     CK+
Sbjct: 110 PQCNQVLDDYFPLVIDYFQNQTDSNGICMHLGLCKS 145

>FER_SACER (P24496) Ferredoxin|
          Length = 105

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -3

Query: 76 SYILLKHCQDMKPRSCVRLCPVQC 5
          +Y++ + C D+  ++C+  CPV C
Sbjct: 1  TYVIAEPCVDVLDKACIEECPVDC 24

>DSG3_HUMAN (P32926) Desmoglein-3 precursor (130 kDa pemphigus vulgaris|
           antigen) (PVA)
          Length = 999

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -3

Query: 283 PQCKRLVLDYIPLIXVKTQTFLETTDVCFTTHACKTGVQATT 158
           P+ K +    +P +      F+E+++VC  T+A  T V+ T+
Sbjct: 676 PEDKEITNICVPPVTANGADFMESSEVCTNTYARGTAVEGTS 717

>FER2_RHORU (P80448) Ferredoxin-2 (Ferredoxin II) (FdII)|
          Length = 106

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 73 YILLKHCQDMKPRSCVRLCPVQC 5
          Y++ ++C   K + CV +CPV C
Sbjct: 2  YVVTENCIKCKYQDCVEVCPVDC 24

>SAP_MOUSE (Q61207) Sulfated glycoprotein 1 precursor (SGP-1) (Prosaposin)|
          Length = 557

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = -3

Query: 346 NTKLEIVGLLFKTCSKAKN-YEPQCKRLVLDYIPLIXVKTQTFLETTDVCFTTHAC 182
           +TK EI+  L K CS   + Y+ QC   V +Y PL+       ++   VC     C
Sbjct: 460 STKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVC 515

>FER1_AFIFE (Q44037) Ferredoxin-1 (Fragment)|
          Length = 93

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 76 SYILLKHCQDMKPRSCVRLCPVQC 5
          +Y++ ++C   K   CV +CPV C
Sbjct: 2  TYVVTENCIKCKYMDCVEVCPVDC 25

>POLG_HCVVO (O92531) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/N
          Length = 3015

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 22   ASHRTEVSYLGSA*AKYRKNNYSLLCPCMIPTHLFFTK 135
            A    EV+ +G +       N  L CPC +P   FFT+
Sbjct: 2088 AEEYVEVARVGDSHFVVGATNQDLKCPCQVPAPEFFTE 2125

>CITN_LACLA (P21608) Citrate-sodium symporter (Citrate transporter) (Citrate|
           carrier protein)
          Length = 442

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +2

Query: 302 AACFEKKPDYLQLGVGI 352
           AA  E KPDY+QLGVG+
Sbjct: 258 AAAEEIKPDYVQLGVGL 274

>YIS7_YEAST (P40566) Hypothetical 87.0 kDa protein in PAN1-PRI1 intergenic|
           region
          Length = 764

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +1

Query: 1   AHIVQDKASHRTEVSYLGSA*AKYRKNNYSLLCPCMIPTHLFFTKWRIEE 150
           A+I  D +S    +  LG A  +    +Y+L C C I +H++   W  E+
Sbjct: 527 AYITNDYSSQTAALDALGFA-LEGSNLSYTLWCYCSINSHIWGDNWNNED 575

>FATH_HUMAN (Q14517) Cadherin-related tumor suppressor homolog precursor (Protein|
            fat homolog)
          Length = 4590

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 112  ESYRGKEDCNCSSYILLKHCQDMKPRSCV 26
            E+  G   CNCS     +HC+D  P   V
Sbjct: 4145 ENTHGSYHCNCSHEYRGRHCEDAAPNQYV 4173

>FER_RICPR (Q9ZCC8) Ferredoxin|
          Length = 108

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 76 SYILLKHCQDMKPRSCVRLCPVQC 5
          +Y++   C   K   CV +CPV C
Sbjct: 1  TYVVTDECVKCKYTDCVEVCPVDC 24


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,759,255
Number of Sequences: 219361
Number of extensions: 873304
Number of successful extensions: 2026
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2026
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)