ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd23p24 |
|---|---|
| Clone Library Name | barley_pub |
>IF1A_WHEAT (P47815) Eukaryotic translation initiation factor 1A (EIF-1A)| (EIF-4C) Length = 143 Score = 219 bits (559), Expect = 4e-57 Identities = 110/128 (85%), Positives = 111/128 (86%) Frame = -1 Query: 535 NEADXDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDI 356 NEAD DKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDI Sbjct: 16 NEADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDI 75 Query: 355 VLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXDYIQF 176 VLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT+RLN DYIQF Sbjct: 76 VLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTVRLNEGVDVDGPEEGEGDSDYIQF 135 Query: 175 XDEDIDKI 152 DEDIDKI Sbjct: 136 EDEDIDKI 143
>IF1A_ONOVI (P56331) Eukaryotic translation initiation factor 1A (EIF-1A)| (EIF-4C) Length = 144 Score = 202 bits (513), Expect = 9e-52 Identities = 102/129 (79%), Positives = 106/129 (82%), Gaps = 1/129 (0%) Frame = -1 Query: 535 NEADXDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDI 356 NEAD DKRELVFKEDGQEYAQV RMLGNGRCEA+C+DGTKRLCHIRGKMHKKVWIAAGDI Sbjct: 16 NEADDDKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDI 75 Query: 355 VLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLN-XXXXXXXXXXXXXXXDYIQ 179 +LVGLRDYQDDKADVILK M DEARLLKAYGELPD RLN DYI+ Sbjct: 76 ILVGLRDYQDDKADVILKLMPDEARLLKAYGELPDNTRLNEGIGAGGLDEEMDTANDYIE 135 Query: 178 FXDEDIDKI 152 F DEDIDKI Sbjct: 136 FEDEDIDKI 144
>IF1AY_PANTR (Q6GVM3) Eukaryotic translation initiation factor 1A, Y-chromosomal| (eIF-1A Y isoform) (eIF-4C) Length = 143 Score = 163 bits (412), Expect = 5e-40 Identities = 83/128 (64%), Positives = 93/128 (72%) Frame = -1 Query: 535 NEADXDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDI 356 NE + +KRELVFKEDGQEYAQV +MLGNGR EA+C DG KRLCHIRGK+ KKVWI DI Sbjct: 16 NENESEKRELVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCHIRGKLRKKVWINTSDI 75 Query: 355 VLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXDYIQF 176 +LVGLRDYQD+KADVILKY DEAR LKAYGELP+ ++N D I Sbjct: 76 ILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEVQFDDIGD 135 Query: 175 XDEDIDKI 152 DEDID I Sbjct: 136 DDEDIDDI 143
>IF1AY_HUMAN (O14602) Eukaryotic translation initiation factor 1A, Y-chromosomal| (eIF-1A Y isoform) (eIF-4C) Length = 143 Score = 163 bits (412), Expect = 5e-40 Identities = 83/128 (64%), Positives = 93/128 (72%) Frame = -1 Query: 535 NEADXDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDI 356 NE + +KRELVFKEDGQEYAQV +MLGNGR EA+C DG KRLCHIRGK+ KKVWI DI Sbjct: 16 NENESEKRELVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCHIRGKLRKKVWINTSDI 75 Query: 355 VLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXDYIQF 176 +LVGLRDYQD+KADVILKY DEAR LKAYGELP+ ++N D I Sbjct: 76 ILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGD 135 Query: 175 XDEDIDKI 152 DEDID I Sbjct: 136 DDEDIDDI 143
>IF1AX_PONPY (Q5RA42) Eukaryotic translation initiation factor 1A, X-chromosomal| (eIF-1A X isoform) (eIF-4C) Length = 143 Score = 162 bits (411), Expect = 6e-40 Identities = 83/128 (64%), Positives = 93/128 (72%) Frame = -1 Query: 535 NEADXDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDI 356 NE + +KRELVFKEDGQEYAQV +MLGNGR EA+C DG KRLCHIRGK+ KKVWI DI Sbjct: 16 NENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDI 75 Query: 355 VLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXDYIQF 176 +LVGLRDYQD+KADVILKY DEAR LKAYGELP+ ++N D I Sbjct: 76 ILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGD 135 Query: 175 XDEDIDKI 152 DEDID I Sbjct: 136 DDEDIDDI 143
>IF1AX_MOUSE (Q8BMJ3) Eukaryotic translation initiation factor 1A, X-chromosomal| (eIF-1A X isoform) (eIF-4C) Length = 143 Score = 162 bits (411), Expect = 6e-40 Identities = 83/128 (64%), Positives = 93/128 (72%) Frame = -1 Query: 535 NEADXDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDI 356 NE + +KRELVFKEDGQEYAQV +MLGNGR EA+C DG KRLCHIRGK+ KKVWI DI Sbjct: 16 NENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDI 75 Query: 355 VLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXDYIQF 176 +LVGLRDYQD+KADVILKY DEAR LKAYGELP+ ++N D I Sbjct: 76 ILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGD 135 Query: 175 XDEDIDKI 152 DEDID I Sbjct: 136 DDEDIDDI 143
>IF1AX_HUMAN (P47813) Eukaryotic translation initiation factor 1A, X-chromosomal| (eIF-1A X isoform) (eIF-4C) Length = 143 Score = 162 bits (411), Expect = 6e-40 Identities = 83/128 (64%), Positives = 93/128 (72%) Frame = -1 Query: 535 NEADXDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDI 356 NE + +KRELVFKEDGQEYAQV +MLGNGR EA+C DG KRLCHIRGK+ KKVWI DI Sbjct: 16 NENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDI 75 Query: 355 VLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXDYIQF 176 +LVGLRDYQD+KADVILKY DEAR LKAYGELP+ ++N D I Sbjct: 76 ILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGD 135 Query: 175 XDEDIDKI 152 DEDID I Sbjct: 136 DDEDIDDI 143
>IF1A_RAT (Q6VV72) Eukaryotic translation initiation factor 1A (eIF-1A)| (eIF-4C) (Liver regeneration-related protein LRRG048) Length = 143 Score = 161 bits (407), Expect = 2e-39 Identities = 81/128 (63%), Positives = 93/128 (72%) Frame = -1 Query: 535 NEADXDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDI 356 NE + +KRELVFKEDGQEYAQV +MLGNGR EA+C DG +RLCHIRGK+ KKVWI DI Sbjct: 16 NENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDI 75 Query: 355 VLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXDYIQF 176 +L+GLRDYQD+KADVILKY DEAR LKAYGELP+ ++N D I Sbjct: 76 ILIGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGD 135 Query: 175 XDEDIDKI 152 DEDID I Sbjct: 136 DDEDIDDI 143
>IF1A_MOUSE (Q60872) Eukaryotic translation initiation factor 1A (eIF-1A)| (eIF-4C) Length = 143 Score = 161 bits (407), Expect = 2e-39 Identities = 81/128 (63%), Positives = 93/128 (72%) Frame = -1 Query: 535 NEADXDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDI 356 NE + +KRELVFKEDGQEYAQV +MLGNGR EA+C DG +RLCHIRGK+ KKVWI DI Sbjct: 16 NENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDI 75 Query: 355 VLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXDYIQF 176 +L+GLRDYQD+KADVILKY DEAR LKAYGELP+ ++N D I Sbjct: 76 ILIGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGD 135 Query: 175 XDEDIDKI 152 DEDID I Sbjct: 136 DDEDIDDI 143
>IF1AH_HUMAN (O75642) Putative eukaryotic translation initiation factor 1A| (eIF-1A) (eIF-4C) Length = 143 Score = 161 bits (407), Expect = 2e-39 Identities = 82/128 (64%), Positives = 93/128 (72%) Frame = -1 Query: 535 NEADXDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDI 356 NE + +KRELVFKEDGQEYAQV +MLGNGR EA+C DG KRLCHIRGK+ KKVWI DI Sbjct: 16 NENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDI 75 Query: 355 VLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXDYIQF 176 +LVGLRDYQD+KADVILKY DEAR L+AYGELP+ ++N D I Sbjct: 76 ILVGLRDYQDNKADVILKYNADEARSLQAYGELPEHAKINETDTFGPGDDDEIQFDDIGD 135 Query: 175 XDEDIDKI 152 DEDID I Sbjct: 136 DDEDIDDI 143
>IF1A_RABIT (P47814) Eukaryotic translation initiation factor 1A (EIF-1A)| (EIF-4C) Length = 143 Score = 153 bits (386), Expect = 5e-37 Identities = 80/128 (62%), Positives = 91/128 (71%) Frame = -1 Query: 535 NEADXDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDI 356 NE + +KRELVFKEDGQEYAQV +MLGNGR EA+ DG KRL HIRGK+ KKVWI DI Sbjct: 16 NENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMLFDGVKRLFHIRGKLRKKVWINTSDI 75 Query: 355 VLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXDYIQF 176 +LVGLR+YQD+KADVILKY DEAR LKAYGELP+ ++N D I Sbjct: 76 ILVGLREYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGD 135 Query: 175 XDEDIDKI 152 DEDID I Sbjct: 136 DDEDIDDI 143
>IF1A_YEAST (P38912) Eukaryotic translation initiation factor 1A (EIF-1A)| (EIF-4C) Length = 153 Score = 141 bits (355), Expect = 2e-33 Identities = 63/100 (63%), Positives = 80/100 (80%) Frame = -1 Query: 535 NEADXDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDI 356 N++D KREL++KE+GQEYAQ+T+MLGNGR EA C DG KR+ HIRGK+ KKVW+ GDI Sbjct: 17 NDSDGPKRELIYKEEGQEYAQITKMLGNGRVEASCFDGNKRMAHIRGKLRKKVWMGQGDI 76 Query: 355 VLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLN 236 +LV LRD+QDD+ DV+ KY DEAR LK GELP+ ++N Sbjct: 77 ILVSLRDFQDDQCDVVHKYNLDEARTLKNQGELPENAKIN 116
>IF1A_SCHPO (P55877) Eukaryotic translation initiation factor 1A (EIF-1A)| (EIF-4C) Length = 138 Score = 138 bits (348), Expect = 1e-32 Identities = 65/100 (65%), Positives = 79/100 (79%) Frame = -1 Query: 535 NEADXDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDI 356 NE + +KREL + E+GQ YAQVT+MLGNGR EA C DG KRL HIRGK+ KKVWI GDI Sbjct: 17 NENENEKRELTYAEEGQMYAQVTKMLGNGRIEAACFDGVKRLGHIRGKLRKKVWINQGDI 76 Query: 355 VLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLN 236 +L+ LR++QD+K DVILKY DEAR LK GELP+T ++N Sbjct: 77 ILLSLREFQDEKGDVILKYTADEARTLKNQGELPETAKIN 116
>IF1A_SULSO (Q97W62) Translation initiation factor 1A (aIF-1A)| Length = 108 Score = 76.6 bits (187), Expect = 6e-14 Identities = 34/84 (40%), Positives = 53/84 (63%) Frame = -1 Query: 526 DXDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLV 347 + R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD+VLV Sbjct: 9 EAPSRDVPRPEEGQTICVVKKMLGGDHLIVLCMDGKERLARIPGKIRKKMWMREGDVVLV 68 Query: 346 GLRDYQDDKADVILKYMNDEARLL 275 G+ D+Q ++ D++ KY NDE + L Sbjct: 69 GIWDFQPNRCDILYKYGNDEIKRL 92
>IF1A1_HALSA (Q9HN64) Translation initiation factor 1A-1 (aIF-1A-1)| Length = 95 Score = 75.1 bits (183), Expect = 2e-13 Identities = 37/87 (42%), Positives = 52/87 (59%) Frame = -1 Query: 517 KRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLR 338 ++ L ED + +A+VT MLG R + C DG +R I G+M K++WI DIVLV Sbjct: 8 RKNLRMPEDDEVFAEVTDMLGANRVQVRCADGEERTARIPGRMQKRIWIREDDIVLVEPW 67 Query: 337 DYQDDKADVILKYMNDEARLLKAYGEL 257 D+QDDKADV +Y +A L+ G + Sbjct: 68 DWQDDKADVTWRYEKSDADQLREEGHI 94
>IF1A_ARCFU (O29481) Translation initiation factor 1A (aIF-1A)| Length = 97 Score = 72.8 bits (177), Expect = 8e-13 Identities = 36/93 (38%), Positives = 54/93 (58%) Frame = -1 Query: 535 NEADXDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDI 356 +E D + L ++ G+ + VT MLG G + C DG +RL I GKM KK+WI GD+ Sbjct: 3 SEDDVIRVRLPDRKKGELFGVVTSMLGAGHIKVRCEDGVERLARIPGKMRKKIWIREGDV 62 Query: 355 VLVGLRDYQDDKADVILKYMNDEARLLKAYGEL 257 V+V +Q D+AD++ +Y N + L+ G L Sbjct: 63 VIVVPWSFQKDRADIVWRYTNPQVEWLERKGYL 95
>IF1A_METKA (Q8TXZ3) Translation initiation factor 1A (aIF-1A)| Length = 111 Score = 72.0 bits (175), Expect = 1e-12 Identities = 35/92 (38%), Positives = 55/92 (59%) Frame = -1 Query: 526 DXDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLV 347 D +++ ++G+ + V +MLGN R + CVDG R+ I GKM K+VWI GD+VLV Sbjct: 7 DETLKKIRLPKEGEIFGVVEKMLGNDRVQVRCVDGKTRVARIPGKMRKRVWIREGDVVLV 66 Query: 346 GLRDYQDDKADVILKYMNDEARLLKAYGELPD 251 ++Q ++ADV +Y + LK G+L + Sbjct: 67 KPWEFQPERADVTWRYTRVQVDWLKRKGKLDE 98
>IF1A_PICTO (Q6L2G4) Translation initiation factor 1A (aIF-1A)| Length = 108 Score = 69.7 bits (169), Expect = 7e-12 Identities = 33/85 (38%), Positives = 49/85 (57%) Frame = -1 Query: 499 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK 320 K+ G+ Y V +M G R +C DG R C I GKM K++WI GD+V+V ++QD+K Sbjct: 17 KKSGEIYGIVEKMSGASRLIVMCEDGVTRNCRIPGKMKKRMWIREGDLVIVKPWEFQDEK 76 Query: 319 ADVILKYMNDEARLLKAYGELPDTL 245 D+I +Y +A L LP+ + Sbjct: 77 GDIIYRYTKTQAAYLSRNHMLPEII 101
>IF1A_SULTO (Q974Z9) Translation initiation factor 1A (aIF-1A)| Length = 108 Score = 68.9 bits (167), Expect = 1e-11 Identities = 33/81 (40%), Positives = 48/81 (59%) Frame = -1 Query: 514 RELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRD 335 +E+ +G+ V +MLG + IC+DG +RL I GKM KK+W+ GD+VL D Sbjct: 13 KEVPKPAEGEVICVVKKMLGAEHVQVICLDGKERLGRIPGKMKKKMWVKEGDVVLAAPWD 72 Query: 334 YQDDKADVILKYMNDEARLLK 272 +Q +K D+I KY E R L+ Sbjct: 73 FQPNKCDIIYKYSESEVRRLE 93
>IF1A_SULAC (Q4JA54) Translation initiation factor 1A (aIF-1A)| Length = 108 Score = 67.8 bits (164), Expect = 3e-11 Identities = 32/80 (40%), Positives = 46/80 (57%) Frame = -1 Query: 514 RELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRD 335 RE+V +G+ V ++ G + IC DG +RL I GK+ KKVWI GD+VL D Sbjct: 13 REVVKPIEGEVICVVKKLFGGEHVQVICTDGKERLGRIPGKLKKKVWIREGDVVLAAPWD 72 Query: 334 YQDDKADVILKYMNDEARLL 275 +Q +K D++ +Y E R L Sbjct: 73 FQPNKCDIVYRYTESEVRRL 92
>IF1A_PYRAE (Q8ZXV9) Translation initiation factor 1A (aIF-1A)| Length = 114 Score = 65.5 bits (158), Expect = 1e-10 Identities = 28/77 (36%), Positives = 47/77 (61%) Frame = -1 Query: 493 DGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKAD 314 +G+ +V MLG+GR + IC DG R+ + G++ +++W+ AGD V+V L D+ +K D Sbjct: 26 EGEILGKVIEMLGDGRFKVICADGQIRVARLPGRLRRRLWLKAGDYVIVALWDFDREKGD 85 Query: 313 VILKYMNDEARLLKAYG 263 ++ KY + LK G Sbjct: 86 IVHKYEKRDVEELKRRG 102
>IF1A1_METAC (Q8TSA3) Translation initiation factor 1A-1 (aIF-1A-1)| Length = 111 Score = 61.6 bits (148), Expect = 2e-09 Identities = 32/81 (39%), Positives = 46/81 (56%) Frame = -1 Query: 499 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK 320 +E+ + A V +LG R C+DG R+ I G M KK WI GD+V+V ++Q++K Sbjct: 29 RENNEILATVESLLGANRLRLRCMDGVVRMGRIPGSMKKKTWIREGDVVIVVPWEFQNEK 88 Query: 319 ADVILKYMNDEARLLKAYGEL 257 ADVI KY + L+ G L Sbjct: 89 ADVIWKYTRPQVDWLERKGYL 109
>IF1A2_METAC (Q8TR33) Translation initiation factor 1A-2 (aIF-1A-2)| Length = 105 Score = 61.2 bits (147), Expect = 2e-09 Identities = 33/81 (40%), Positives = 46/81 (56%) Frame = -1 Query: 499 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK 320 KE+ + A V +LG+ R C+DG R+ I G +KK+WI GD+V+V + QD K Sbjct: 24 KENHEVLATVGSLLGSKRVNLQCMDGVVRMGRIPGSKNKKMWIREGDVVIVTPWEIQDTK 83 Query: 319 ADVILKYMNDEARLLKAYGEL 257 ADVI KY + L+ G L Sbjct: 84 ADVIWKYTRPQIEWLERKGYL 104
>IF1A_THEAC (Q03590) Translation initiation factor 1A (aIF-1A)| Length = 119 Score = 61.2 bits (147), Expect = 2e-09 Identities = 32/97 (32%), Positives = 51/97 (52%) Frame = -1 Query: 535 NEADXDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDI 356 NE + L K+ G+ + V +M G R +C DG R I G+M K++WI D+ Sbjct: 19 NEESIGRVILPNKKKGEMFGIVEKMEGASRLSVMCEDGYTRNARIPGRMRKRMWIREKDL 78 Query: 355 VLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTL 245 V+V ++Q +KADV+ +Y +A L LP+ + Sbjct: 79 VIVKPWEFQPEKADVVYRYTKTQASYLSRNHMLPEVI 115
>IF1A2_METMA (Q8PUJ8) Translation initiation factor 1A-2 (aIF-1A-2)| Length = 106 Score = 60.5 bits (145), Expect = 4e-09 Identities = 33/81 (40%), Positives = 45/81 (55%) Frame = -1 Query: 499 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK 320 KE+ + A V +LG+ R C+DG R+ I G +KK+WI GDIV+ + QD K Sbjct: 25 KENHEVLATVGSLLGSKRVNLQCMDGVVRMGRIPGSKNKKMWIREGDIVIATPWEIQDSK 84 Query: 319 ADVILKYMNDEARLLKAYGEL 257 ADVI KY + L+ G L Sbjct: 85 ADVIWKYTRPQIEWLERKGYL 105
>IF1A1_METMA (Q8PVF1) Translation initiation factor 1A-1 (aIF-1A-1)| Length = 111 Score = 60.1 bits (144), Expect = 5e-09 Identities = 31/81 (38%), Positives = 45/81 (55%) Frame = -1 Query: 499 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK 320 +E+ + A V +LG R C+DG R+ I G M KK WI GD+V+ ++Q++K Sbjct: 29 RENNEILATVESLLGANRLRLRCMDGVVRMGRIPGSMKKKAWIREGDVVIAVPWEFQNEK 88 Query: 319 ADVILKYMNDEARLLKAYGEL 257 ADVI KY + L+ G L Sbjct: 89 ADVIWKYTRPQVDWLERKGYL 109
>IF1A_THEVO (Q979F7) Translation initiation factor 1A (aIF-1A)| Length = 123 Score = 60.1 bits (144), Expect = 5e-09 Identities = 29/85 (34%), Positives = 47/85 (55%) Frame = -1 Query: 499 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK 320 K+ G+ + V +M G R +C DG R I G+M K++WI D+V+V ++Q +K Sbjct: 35 KKKGEMFGIVEKMEGASRLSVMCEDGYTRNARIPGRMRKRMWIREKDLVIVKPWEFQPEK 94 Query: 319 ADVILKYMNDEARLLKAYGELPDTL 245 ADV+ +Y +A L LP+ + Sbjct: 95 ADVVYRYTKTQASYLSRNHMLPEVI 119
>IF1A_AERPE (P57676) Translation initiation factor 1A (aIF-1A)| Length = 111 Score = 59.7 bits (143), Expect = 7e-09 Identities = 30/85 (35%), Positives = 46/85 (54%) Frame = -1 Query: 499 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK 320 +++G V R++G G E +C DG + I GKM ++VW+ GD+VL D K Sbjct: 19 EDEGTMLCIVQRVVGAGFLEVLCTDGEVYMARIPGKMRRRVWMREGDVVLFLPWGTADKK 78 Query: 319 ADVILKYMNDEARLLKAYGELPDTL 245 +V+ +Y+ DE R L LP+ L Sbjct: 79 GEVVYRYLRDEVRKLIDMNLLPEEL 103
>IF1A_METTH (O27085) Translation initiation factor 1A (aIF-1A)| Length = 99 Score = 59.3 bits (142), Expect = 9e-09 Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 1/73 (1%) Frame = -1 Query: 472 VTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQ-DDKADVILKYM 296 V +++G+G+ + C DG RL I GKM K++WI GD+VLV ++Q ++KAD++ +Y Sbjct: 25 VEQIMGHGKLKVRCADGHIRLGRIPGKMKKRIWIREGDVVLVKPWEFQSEEKADIVWRYT 84 Query: 295 NDEARLLKAYGEL 257 E+ L+ G L Sbjct: 85 RTESNWLERKGYL 97
>IF1A3_METAC (Q8TR31) Translation initiation factor 1A-3 (aIF-1A-3)| Length = 110 Score = 58.9 bits (141), Expect = 1e-08 Identities = 30/81 (37%), Positives = 44/81 (54%) Frame = -1 Query: 499 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK 320 K+ + A V +LG+ R C+DG R+ I G +KK+W+ GD+V+ + QD K Sbjct: 29 KDRNEVLATVASLLGSKRVTLQCMDGVVRMGRIPGSKNKKMWVREGDVVIANPWEIQDSK 88 Query: 319 ADVILKYMNDEARLLKAYGEL 257 ADVI KY + L+ G L Sbjct: 89 ADVIWKYTKPQVDWLERKGYL 109
>IF1A_METJA (Q57887) Translation initiation factor 1A (aIF-1A)| Length = 102 Score = 57.0 bits (136), Expect = 5e-08 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%) Frame = -1 Query: 499 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQ-DD 323 KE+ + + +MLG R C+DG RL I G++ ++W+ GD+V+V + Q D Sbjct: 17 KEENEILGIIEQMLGASRVRVRCLDGKTRLGRIPGRLKNRIWVREGDVVIVKPWEVQGDQ 76 Query: 322 KADVILKYMNDEARLLKAYGELPDTL 245 K D+I +Y + LK G L + L Sbjct: 77 KCDIIWRYTKTQVEWLKRKGYLDELL 102
>IF1A2_HALSA (Q9HP87) Translation initiation factor 1A-2 (aIF-1A-2)| Length = 94 Score = 57.0 bits (136), Expect = 5e-08 Identities = 30/90 (33%), Positives = 47/90 (52%) Frame = -1 Query: 526 DXDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLV 347 + +R L D + +A V R G C DG +R+ I G+M + WI GD+VL Sbjct: 4 ESGRRNLRMPNDDEVFAVVKRHDGGNHVTLQCEDGKERMGRIPGRMKYRTWINEGDVVLA 63 Query: 346 GLRDYQDDKADVILKYMNDEARLLKAYGEL 257 D+QD+KA+V +Y + +A L+ G + Sbjct: 64 EPWDWQDEKANVEWRYSDQDADQLREEGHI 93
>IF1A_PYRHO (O59280) Translation initiation factor 1A (aIF-1A)| Length = 115 Score = 52.8 bits (125), Expect = 9e-07 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Frame = -1 Query: 496 EDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK- 320 E Q + V + LG G + C DG R C I GK+ ++VWI GD+V+V Q DK Sbjct: 22 EGNQLFGVVEQALGAGWMDVRCEDGKIRRCRIPGKLRRRVWIRVGDLVIVQPWPVQSDKR 81 Query: 319 ADVILKYMNDEARLLKAYGEL 257 D++ +Y + L G++ Sbjct: 82 GDIVYRYTQTQVDWLLRKGKI 102
>IF1A_PYRFU (Q8U0K5) Translation initiation factor 1A (aIF-1A)| Length = 115 Score = 52.8 bits (125), Expect = 9e-07 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Frame = -1 Query: 496 EDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK- 320 E Q + V + LG G + C DG R C I G++ ++VWI GD+V+V Q DK Sbjct: 22 EGNQLFGVVEQALGAGWMDVRCEDGKVRRCRIPGRLRRRVWIKVGDLVIVEPWPVQSDKR 81 Query: 319 ADVILKYMNDEARLLKAYGEL 257 D++ +Y + L G++ Sbjct: 82 GDIVYRYTQTQVEWLLRKGKI 102
>IF1A_PYRAB (Q9V138) Translation initiation factor 1A (aIF-1A)| Length = 115 Score = 52.8 bits (125), Expect = 9e-07 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Frame = -1 Query: 496 EDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK- 320 E Q + V + LG G + C DG R C I GK+ ++VWI GD+V+V Q DK Sbjct: 22 EGNQLFGVVEQALGAGWMDVRCEDGKIRRCRIPGKLRRRVWIRVGDLVIVQPWPVQSDKR 81 Query: 319 ADVILKYMNDEARLLKAYGEL 257 D++ +Y + L G++ Sbjct: 82 GDIVYRYTQTQVDWLLRKGKI 102
>IF1A_PYRKO (Q5JH78) Translation initiation factor 1A (aIF-1A)| Length = 117 Score = 51.2 bits (121), Expect = 3e-06 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = -1 Query: 499 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQ-DD 323 + GQ + + + LG G + C DG R C I GK+ +++W+ GD+V+V Q D+ Sbjct: 24 RSKGQLFGVIEQALGAGWMDVRCEDGKVRRCRIPGKLKRRMWMRVGDVVIVQPWPVQSDE 83 Query: 322 KADVILKYMNDEARLLKAYGEL 257 + D++ +Y + L G++ Sbjct: 84 RGDIVYRYTRTQVDWLLRKGKI 105
>IF1A_METMP (Q6LZM1) Translation initiation factor 1A (aIF-1A)| Length = 104 Score = 50.4 bits (119), Expect = 4e-06 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Frame = -1 Query: 472 VTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQ-DDKADVILKYM 296 + +MLG R C+DG R+ I GK+ +K+W+ D+V+V + Q D+K DVI +Y Sbjct: 28 IEQMLGASRVRVRCMDGKLRMGRIPGKLKRKIWVREDDVVIVTPWEVQSDEKCDVIWRYT 87 Query: 295 NDEARLLKAYGEL 257 + L G L Sbjct: 88 KGQVDWLNRKGYL 100
>IF1C_PSEAK (Q3ZJ80) Translation initiation factor IF-1, chloroplast| Length = 109 Score = 33.5 bits (75), Expect = 0.54 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%) Frame = -1 Query: 472 VTRMLGNGRCEAICVDGTKRLCHIRGKMHKK-VWIAAGDIVLVGLRDYQDDKADVILKYM 296 +T+ L NG +G K + HI GK+ + + I GD V+V L Y + +I + Sbjct: 34 ITQCLSNGMFRVKLENGFKVIAHISGKIRRNFIRILLGDSVIVELSPYDLTRGRIIYR-- 91 Query: 295 NDEARLLKAYGELPDTLRLN 236 LK +TLR N Sbjct: 92 ------LKPTNSSTETLRFN 105
>BCSA3_ACEXY (Q9WX61) Cellulose synthase 1 catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 745 Score = 33.5 bits (75), Expect = 0.54 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 3/41 (7%) Frame = -3 Query: 149 SFFFSSPR---LASPLYFLFYSVLIACARPSLSVCIGXWAV 36 SFFF+ PR LASPL FLF+S I A P + +G +A+ Sbjct: 406 SFFFAIPRVIFLASPLAFLFFSQNIIAASP---LAVGVYAI 443
>PRIM_BPT7 (P03692) DNA primase/helicase (EC 2.7.7.-)| Length = 566 Score = 31.2 bits (69), Expect = 2.7 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = -1 Query: 454 NGRCEAICVDG-TKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARL 278 NGR A+ G +K C G WIA D V+ + DY+D +++ + + D+ + Sbjct: 75 NGRYSALTARGISKETCQKAG-----YWIAKVDGVMYQVADYRDQNGNIVSQKVRDKDKN 129 Query: 277 LKAYG 263 K G Sbjct: 130 FKTTG 134
>IF1_MYCH2 (Q601J2) Translation initiation factor IF-1| Length = 75 Score = 30.8 bits (68), Expect = 3.5 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = -1 Query: 475 QVTRMLGNGRCEAICVDGTKRLCHIRGKMH-KKVWIAAGDIVLVGLRDYQDDKADVILKY 299 +VT + E +G K CHI GKM + I GD+V V + Y K ++ ++ Sbjct: 15 KVTHVFNAQEYEVTLENGIKLNCHIAGKMKIHHIKIIIGDMVKVEISPYDLSKGRIVYRF 74
>BCSA1_ACEXY (P19449) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 754 Score = 30.4 bits (67), Expect = 4.6 Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 3/30 (10%) Frame = -3 Query: 149 SFFFSSPR---LASPLYFLFYSVLIACARP 69 SFFF+ PR LASPL FLF+ I A P Sbjct: 406 SFFFAIPRVIFLASPLAFLFFGQNIIAASP 435
>TYSY_SHEON (Q8EH94) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)| Length = 264 Score = 30.4 bits (67), Expect = 4.6 Identities = 15/53 (28%), Positives = 27/53 (50%) Frame = -1 Query: 421 TKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYG 263 T + CH+R +H+ +W GD + LR D+K + ++ ++ L YG Sbjct: 46 TTKKCHMRSIIHELLWFLKGDTNIAYLR---DNKVSIWDEWADENGDLGPVYG 95
>SLAPO_BREBE (P09333) Outer cell wall protein precursor (OWP)| Length = 1004 Score = 30.4 bits (67), Expect = 4.6 Identities = 30/111 (27%), Positives = 42/111 (37%), Gaps = 6/111 (5%) Frame = -1 Query: 625 PSKAXPPQSRP---TPAMPXXXXXXXXXXXXXKNEADXDKRELVFKEDGQE---YAQVTR 464 P KA S P P + + AD D + +V K+DG+E YA T Sbjct: 819 PQKAIDGVSAPDKEAPVVTGVEAGKTYNTAVTPDSADKDIKTVVLKKDGKELAGYALKTP 878 Query: 463 MLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADV 311 + NG E + D ++ KV I A D ++ DDK V Sbjct: 879 ISENGSYELVVTDNAGNTTTVK----FKVDIPAEDKKAPEIKTVTDDKVAV 925 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,579,044 Number of Sequences: 219361 Number of extensions: 721090 Number of successful extensions: 2276 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 2233 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2274 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
