Clone Name | rbasd23p23 |
---|---|
Clone Library Name | barley_pub |
>YCBX_ECOLI (P75863) Hypothetical protein ycbX| Length = 369 Score = 95.5 bits (236), Expect = 1e-19 Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Frame = -1 Query: 673 EWLSAYFGKPSRLVRFKEESEIRPTNPEYAQGYK------LTFTDCFPFLIASQGSLDAL 512 +WLS +F + E ++R P+ + K L+F D +P+L+A++ SL L Sbjct: 108 KWLSGFFSR---------EVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDL 158 Query: 511 NELLKEPVPINRFRPNILVDGCHPYAEDLWKTIKIDKLTFDGVKLCDRCKVPTVNQENGI 332 + V + +FRPN++V G + ED WK I+I + FD VK C RC TV+ E G Sbjct: 159 QQRCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQ 218 Query: 331 L--GTEPTETMLTFRSGEVLRPSHKNKQKVYFGQNLVCKESVSAKGKGRIVKVGDPVYVL 158 EP +T+ +FR+ + + V FGQNL+ + S +++VGD V +L Sbjct: 219 KHPAGEPLKTLQSFRTAQ-------DNGDVDFGQNLIARNS-------GVIRVGDEVEIL 264 Query: 157 QTYPS 143 T P+ Sbjct: 265 ATAPA 269
>COGT1_ARATH (Q9ZQ99) Cytokinin-O-glucosyltransferase 1 (EC 2.4.1.-) (Zeatin| O-glucosyltransferase 1) (AtZOG1) Length = 491 Score = 32.3 bits (72), Expect = 1.4 Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 9/99 (9%) Frame = -1 Query: 652 GKPSRLVRFKEESEIRPTNPEYAQ--------GYKLTFTDCFPFLIASQGSLDALNELLK 497 G P LV+ K S+ +PE + G LTF F L + + +LLK Sbjct: 62 GLPINLVQVKFPSQ-ESGSPEGQENLDLLDSLGASLTFFKAFSLLE------EPVEKLLK 114 Query: 496 EPVPINRFRPN-ILVDGCHPYAEDLWKTIKIDKLTFDGV 383 E P RPN I+ D C PY + K + I K+ F G+ Sbjct: 115 EIQP----RPNCIIADMCLPYTNRIAKNLGIPKIIFHGM 149
>RS4E_METVA (P14023) 30S ribosomal protein S4e| Length = 244 Score = 32.0 bits (71), Expect = 1.9 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 20/116 (17%) Frame = -1 Query: 448 CHPYAEDLWKTIKIDKLTFDGVK---------LCDRCKVPTVNQ-------ENGILGTEP 317 C A + K I++ K+ DGVK L D +P +N+ ENG + + Sbjct: 55 CADNAREAKKIIQMGKILIDGVKRKEYKHPVGLMDVLSIPELNENYLVLFDENGRISLKK 114 Query: 316 TET----MLTFRSGEVLRPSHKNKQKVYFGQNLVCKESVSAKGKGRIVKVGDPVYV 161 TE + + V++ H + ++ G+N + K + + K + I K GD V V Sbjct: 115 TEKTGVKLCKIVNKTVIKGGHI-QLNLHDGRNQIVKVANALKAEEDIYKTGDSVLV 169
>TSA4_GIALA (P21849) Major surface-labeled trophozoite antigen 417 precursor| Length = 713 Score = 31.2 bits (69), Expect = 3.2 Identities = 18/68 (26%), Positives = 24/68 (35%) Frame = -1 Query: 400 LTFDGVKLCDRCKVPTVNQENGILGTEPTETMLTFRSGEVLRPSHKNKQKVYFGQNLVCK 221 LT DG C C T +NG+ + + T + YF N C Sbjct: 478 LTIDGASYCSECATTTEYPQNGVCAPKASRATPTCNDSPIQNGVCGTCADNYFKMNGGCY 537 Query: 220 ESVSAKGK 197 E+V GK Sbjct: 538 ETVKYPGK 545
>TS11_GIALA (Q03185) Major surface trophozoite antigen 11 precursor| Length = 667 Score = 30.4 bits (67), Expect = 5.4 Identities = 17/68 (25%), Positives = 25/68 (36%) Frame = -1 Query: 400 LTFDGVKLCDRCKVPTVNQENGILGTEPTETMLTFRSGEVLRPSHKNKQKVYFGQNLVCK 221 LT DG C C +NGI + T+ T ++ V + + N C Sbjct: 426 LTIDGASYCSECDTQNEYPQNGICTSTTARTVATCKNSNVANGICSSCTNGFLRMNGGCY 485 Query: 220 ESVSAKGK 197 E+ GK Sbjct: 486 ETTKFPGK 493
>NUOF_BUCAP (Q8K9Y3) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 447 Score = 30.4 bits (67), Expect = 5.4 Identities = 15/51 (29%), Positives = 22/51 (43%) Frame = -2 Query: 180 SATRFTFFRHTLLPMKFQPERGLGSTYCICVYVCVEEMTGSVDFVCTLRKF 28 + T F +H LPM F GS + + V+ T + VC + KF Sbjct: 296 AGTDFLIEKHLDLPMDFTSIAKAGSRLGTAIAMAVDNKTNMISLVCNIEKF 346
>CAC1G_RAT (O54898) Voltage-dependent T-type calcium channel alpha-1G subunit| (Voltage-gated calcium channel alpha subunit Cav3.1) Length = 2254 Score = 30.0 bits (66), Expect = 7.1 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = +3 Query: 414 MVFHRSSA*GWHPSTKIFGLKRLIGTGSLRSSFSASSEP 530 ++ H ++ HP + G+ +G+GS R+S S S+EP Sbjct: 1017 LIIHTAATPMSHPKSSSTGVGEALGSGSRRTSSSGSAEP 1055
>DHE4_UNKP (P14657) NADP-specific glutamate dehydrogenase (EC 1.4.1.4)| (NADP-GDH) Length = 446 Score = 29.6 bits (65), Expect = 9.3 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -1 Query: 604 PTNPEYAQGYKLTFTDCFPFLIASQGSLD-ALNELLKEPVPINRFR 470 P PEY Q + FT +PF+ + + AL E L EP I +FR Sbjct: 19 PHQPEYLQAVREVFTSLWPFIERNPAYREQALLERLVEPERIIQFR 64 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 103,963,888 Number of Sequences: 219361 Number of extensions: 2283660 Number of successful extensions: 5954 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 5773 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5954 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7026286028 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)