ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23p22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EPA4B_XENLA (Q91694) Ephrin type-A receptor 4-B precursor (EC 2.... 28 6.7
2EPHA4_MOUSE (Q03137) Ephrin type-A receptor 4 precursor (EC 2.7.... 28 6.7
3EPA4A_XENLA (Q91845) Ephrin type-A receptor 4-A precursor (EC 2.... 28 6.7

>EPA4B_XENLA (Q91694) Ephrin type-A receptor 4-B precursor (EC 2.7.10.1)|
           (Tyrosine-protein kinase receptor PAG) (Pagliaccio)
          Length = 985

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 67  CTLDMYKAARRSTSASPSGPXQYLLLPGATTCT 165
           C +  YKA     + S   P  Y L  G+T+CT
Sbjct: 276 CKVGYYKALSTDAACSKCPPHSYALREGSTSCT 308



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>EPHA4_MOUSE (Q03137) Ephrin type-A receptor 4 precursor (EC 2.7.10.1)|
           (Tyrosine-protein kinase receptor SEK) (MPK-3)
          Length = 986

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 67  CTLDMYKAARRSTSASPSGPXQYLLLPGATTCT 165
           C +  YKA     S +   P  Y +  GAT+CT
Sbjct: 276 CKIGYYKALSTDASCAKCPPHSYSVWEGATSCT 308



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>EPA4A_XENLA (Q91845) Ephrin type-A receptor 4-A precursor (EC 2.7.10.1)|
           (Tyrosine-protein kinase receptor SEK-1) (xSEK-1)
          Length = 986

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 67  CTLDMYKAARRSTSASPSGPXQYLLLPGATTCT 165
           C +  YKA     + S   P  Y L  G+T+CT
Sbjct: 276 CKVGYYKALSTDAACSKCPPHSYALREGSTSCT 308


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.130    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,676,325
Number of Sequences: 219361
Number of extensions: 258284
Number of successful extensions: 557
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 80,573,946
effective HSP length: 35
effective length of database: 72,896,311
effective search space used: 1749511464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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