Clone Name | rbasd23p19 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009262.1| Triticum aestivum clone wlk4.pk0022.b7:fis, full insert mRNA sequence Length = 2997 Score = 591 bits (298), Expect = e-166 Identities = 355/373 (95%), Gaps = 1/373 (0%) Strand = Plus / Minus Query: 132 atctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccgg 191 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2571 atctatgtggtgaggatggggggaaggtagtccgacttggcgccgaggatgcgggcccgg 2512 Query: 192 gtgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacacca 251 ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| || Sbjct: 2511 gtgtcggggaagaactccatgcccggcagctccgtcaccacgccgtcgctggcgacgccg 2452 Query: 252 atggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataag 311 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 2451 atggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctcgagtatatg 2392 Query: 312 tcccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctccgggcgc 371 ||||||||||| || |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 2391 tcccagtacttctccgcgatcctgttcaccttctgcacgcactcgacgctctccgggcgc 2332 Query: 372 tggaacacgtcatccagcatacctaggtgctcgtaccacagcgccatccggaagccgtgg 431 ||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 2331 tggaacacgtcgtccagcatgcccaggtgctcgtaccacagtgccatccggaagccgtgg 2272 Query: 432 atctggccccgggccggctncctgttggctagatggtatggctggtatgcgcccatggca 491 ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct: 2271 atctggccccgggccggctccctgttggctagatggtatggctggtaagcgcccatggca 2212 Query: 492 attctcggagtcc 504 | ||||||||||| Sbjct: 2211 a-tctcggagtcc 2200 Score = 151 bits (76), Expect = 3e-33 Identities = 85/88 (96%) Strand = Plus / Minus Query: 1 ctcaaccatgcacaccactgcgcttattaactgtcccacaactataacaacctgctattt 60 ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||| Sbjct: 2695 ctcaaccatgcacaccactgcgcttattaacagtcccgcaactataacagcctgctattt 2636 Query: 61 tctgaaacacaagttctgaatcaccaaa 88 |||||||||||||||||||||||||||| Sbjct: 2635 tctgaaacacaagttctgaatcaccaaa 2608
>dbj|AK061865.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-H06, full insert sequence Length = 1084 Score = 371 bits (187), Expect = 2e-99 Identities = 315/358 (87%) Strand = Plus / Minus Query: 133 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 192 |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| | Sbjct: 769 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 710 Query: 193 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 252 |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| |||| Sbjct: 709 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 650 Query: 253 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 312 |||||||||| || |||||||| ||||||||||||| ||||||||||||||||| | || Sbjct: 649 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 590 Query: 313 cccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctccgggcgct 372 |||||||||| || |||||||||||||||||||| |||||||| | |||||| ||||||| Sbjct: 589 cccagtacttctccgcgatcctgttcaccttctgcacacactccaggctctcggggcgct 530 Query: 373 ggaacacgtcatccagcatacctaggtgctcgtaccacagcgccatccggaagccgtgga 432 ||||||| ||||||||||| || |||||||||||||||||||||||||||||||| |||| Sbjct: 529 ggaacacatcatccagcattcccaggtgctcgtaccacagcgccatccggaagccatgga 470 Query: 433 tctggccccgggccggctncctgttggctagatggtatggctggtatgcgcccatggc 490 ||||||| ||||| || | |||| | || ||||||||||||||||| |||||||||| Sbjct: 469 tctggccacgggctggttgcctggtcgccagatggtatggctggtacccgcccatggc 412
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 371 bits (187), Expect = 2e-99 Identities = 315/358 (87%) Strand = Plus / Plus Query: 133 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 192 |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| | Sbjct: 3723982 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 3724041 Query: 193 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 252 |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| |||| Sbjct: 3724042 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 3724101 Query: 253 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 312 |||||||||| || |||||||| ||||||||||||| ||||||||||||||||| | || Sbjct: 3724102 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 3724161 Query: 313 cccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctccgggcgct 372 |||||||||| || |||||||||||||||||||| |||||||| | |||||| ||||||| Sbjct: 3724162 cccagtacttctccgcgatcctgttcaccttctgcacacactccaggctctcggggcgct 3724221 Query: 373 ggaacacgtcatccagcatacctaggtgctcgtaccacagcgccatccggaagccgtgga 432 ||||||| ||||||||||| || |||||||||||||||||||||||||||||||| |||| Sbjct: 3724222 ggaacacatcatccagcattcccaggtgctcgtaccacagcgccatccggaagccatgga 3724281 Query: 433 tctggccccgggccggctncctgttggctagatggtatggctggtatgcgcccatggc 490 ||||||| ||||| || | |||| | || ||||||||||||||||| |||||||||| Sbjct: 3724282 tctggccacgggctggttgcctggtcgccagatggtatggctggtacccgcccatggc 3724339
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 371 bits (187), Expect = 2e-99 Identities = 315/358 (87%) Strand = Plus / Plus Query: 133 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 192 |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| | Sbjct: 132462 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 132521 Query: 193 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 252 |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| |||| Sbjct: 132522 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 132581 Query: 253 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 312 |||||||||| || |||||||| ||||||||||||| ||||||||||||||||| | || Sbjct: 132582 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 132641 Query: 313 cccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctccgggcgct 372 |||||||||| || |||||||||||||||||||| |||||||| | |||||| ||||||| Sbjct: 132642 cccagtacttctccgcgatcctgttcaccttctgcacacactccaggctctcggggcgct 132701 Query: 373 ggaacacgtcatccagcatacctaggtgctcgtaccacagcgccatccggaagccgtgga 432 ||||||| ||||||||||| || |||||||||||||||||||||||||||||||| |||| Sbjct: 132702 ggaacacatcatccagcattcccaggtgctcgtaccacagcgccatccggaagccatgga 132761 Query: 433 tctggccccgggccggctncctgttggctagatggtatggctggtatgcgcccatggc 490 ||||||| ||||| || | |||| | || ||||||||||||||||| |||||||||| Sbjct: 132762 tctggccacgggctggttgcctggtcgccagatggtatggctggtacccgcccatggc 132819
>dbj|AK065102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N03, full insert sequence Length = 2851 Score = 371 bits (187), Expect = 2e-99 Identities = 315/358 (87%) Strand = Plus / Minus Query: 133 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 192 |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| | Sbjct: 2553 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 2494 Query: 193 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 252 |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| |||| Sbjct: 2493 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 2434 Query: 253 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 312 |||||||||| || |||||||| ||||||||||||| ||||||||||||||||| | || Sbjct: 2433 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 2374 Query: 313 cccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctccgggcgct 372 |||||||||| || |||||||||||||||||||| |||||||| | |||||| ||||||| Sbjct: 2373 cccagtacttctccgcgatcctgttcaccttctgcacacactccaggctctcggggcgct 2314 Query: 373 ggaacacgtcatccagcatacctaggtgctcgtaccacagcgccatccggaagccgtgga 432 ||||||| ||||||||||| || |||||||||||||||||||||||||||||||| |||| Sbjct: 2313 ggaacacatcatccagcattcccaggtgctcgtaccacagcgccatccggaagccatgga 2254 Query: 433 tctggccccgggccggctncctgttggctagatggtatggctggtatgcgcccatggc 490 ||||||| ||||| || | |||| | || ||||||||||||||||| |||||||||| Sbjct: 2253 tctggccacgggctggttgcctggtcgccagatggtatggctggtacccgcccatggc 2196
>dbj|AB001920.1| Oryza sativa (japonica cultivar-group) gene for phospholipase D, complete cds Length = 5871 Score = 371 bits (187), Expect = 2e-99 Identities = 315/358 (87%) Strand = Plus / Minus Query: 133 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 192 |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| | Sbjct: 5333 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 5274 Query: 193 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 252 |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| |||| Sbjct: 5273 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 5214 Query: 253 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 312 |||||||||| || |||||||| ||||||||||||| ||||||||||||||||| | || Sbjct: 5213 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 5154 Query: 313 cccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctccgggcgct 372 |||||||||| || |||||||||||||||||||| |||||||| | |||||| ||||||| Sbjct: 5153 cccagtacttctccgcgatcctgttcaccttctgcacacactccaggctctcggggcgct 5094 Query: 373 ggaacacgtcatccagcatacctaggtgctcgtaccacagcgccatccggaagccgtgga 432 ||||||| ||||||||||| || |||||||||||||||||||||||||||||||| |||| Sbjct: 5093 ggaacacatcatccagcattcccaggtgctcgtaccacagcgccatccggaagccatgga 5034 Query: 433 tctggccccgggccggctncctgttggctagatggtatggctggtatgcgcccatggc 490 ||||||| ||||| || | |||| | || ||||||||||||||||| |||||||||| Sbjct: 5033 tctggccacgggctggttgcctggtcgccagatggtatggctggtacccgcccatggc 4976
>dbj|D73411.1|RICPHD2 Oryza sativa (japonica cultivar-group) mRNA for phospholipase D, complete cds Length = 2990 Score = 371 bits (187), Expect = 2e-99 Identities = 315/358 (87%) Strand = Plus / Minus Query: 133 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 192 |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| | Sbjct: 2621 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 2562 Query: 193 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 252 |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| |||| Sbjct: 2561 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 2502 Query: 253 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 312 |||||||||| || |||||||| ||||||||||||| ||||||||||||||||| | || Sbjct: 2501 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 2442 Query: 313 cccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctccgggcgct 372 |||||||||| || |||||||||||||||||||| |||||||| | |||||| ||||||| Sbjct: 2441 cccagtacttctccgcgatcctgttcaccttctgcacacactccaggctctcggggcgct 2382 Query: 373 ggaacacgtcatccagcatacctaggtgctcgtaccacagcgccatccggaagccgtgga 432 ||||||| ||||||||||| || |||||||||||||||||||||||||||||||| |||| Sbjct: 2381 ggaacacatcatccagcattcccaggtgctcgtaccacagcgccatccggaagccatgga 2322 Query: 433 tctggccccgggccggctncctgttggctagatggtatggctggtatgcgcccatggc 490 ||||||| ||||| || | |||| | || ||||||||||||||||| |||||||||| Sbjct: 2321 tctggccacgggctggttgcctggtcgccagatggtatggctggtacccgcccatggc 2264
>dbj|AK119523.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E03, full insert sequence Length = 2831 Score = 355 bits (179), Expect = 9e-95 Identities = 313/358 (87%) Strand = Plus / Minus Query: 133 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 192 |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| | Sbjct: 2559 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 2500 Query: 193 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 252 |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||| | |||| Sbjct: 2499 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcggcgccaa 2440 Query: 253 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 312 |||||||||| || |||||||| ||||||||||||| ||||||||||||||||| | || Sbjct: 2439 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 2380 Query: 313 cccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctccgggcgct 372 |||||||||| || |||||||||||||||||||| |||||||| | || ||| ||||||| Sbjct: 2379 cccagtacttctccgcgatcctgttcaccttctgcacacactccaggccctcggggcgct 2320 Query: 373 ggaacacgtcatccagcatacctaggtgctcgtaccacagcgccatccggaagccgtgga 432 ||||||| ||||||||||| || |||||||||||||||||||||||||||||||| |||| Sbjct: 2319 ggaacacatcatccagcattcccaggtgctcgtaccacagcgccatccggaagccatgga 2260 Query: 433 tctggccccgggccggctncctgttggctagatggtatggctggtatgcgcccatggc 490 ||||||| ||||| || | |||| | || ||||||||||||||||| |||||||||| Sbjct: 2259 tctggccacgggctggttgcctggtcgccagatggtatggctggtacccgcccatggc 2202
>gb|AY109642.1| Zea mays CL1830_1 mRNA sequence Length = 2876 Score = 287 bits (145), Expect = 2e-74 Identities = 316/372 (84%), Gaps = 1/372 (0%) Strand = Plus / Minus Query: 133 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 192 ||||||||||||||||||| || ||||| ||||||||| | ||||||| |||||| |||| Sbjct: 2546 tctatgtggtgaggatgggcgggaggtaatccgacttgttcccgaggacgcgggcgcggg 2487 Query: 193 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 252 ||||||||||| |||||| || |||||||| || || ||||||| | |||||| | Sbjct: 2486 tgtcggggaagttctccatcccgggcagctcggtaacgctgccgtcggcagtgacaccga 2427 Query: 253 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 312 | |||||||| || |||||||| |||||||||||||||||||||||||| ||||| | || Sbjct: 2426 tcgggtagctgaggaggtggcccgggaggtcctgctccaggtcgtcgctcgagtacaggt 2367 Query: 313 cccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctccgggcgct 372 |||||||||| ||||||| | |||||||||||| |||||||| |||||||| || |||| Sbjct: 2366 cccagtacttctcggcgacctcgttcaccttctgcacacactctacgctctcgggccgct 2307 Query: 373 ggaacacgtcatccagcatacctaggtgctcgtaccacagcgccatccggaagccgtgga 432 |||| ||||| |||||||| || |||||||||||||| || | |||||||||||| |||| Sbjct: 2306 ggaagacgtcttccagcattcccaggtgctcgtaccaaagagacatccggaagccatgga 2247 Query: 433 tctggccccgggccggctncctgttggctagatggtatggctggtatgcgcccatggcaa 492 ||||||||||||| |||| ||| | || | ||||| |||||||| ||||||||||| | Sbjct: 2246 tctggccccgggcaggctgcctagtcgccaagtggtacggctggtacgcgcccatggcga 2187 Query: 493 ttctcggagtcc 504 ||||||||||| Sbjct: 2186 -tctcggagtcc 2176
>dbj|D73410.1|MZEPHD1 Zea mays mRNA for phospholipase D, complete cds Length = 2793 Score = 287 bits (145), Expect = 2e-74 Identities = 316/372 (84%), Gaps = 1/372 (0%) Strand = Plus / Minus Query: 133 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 192 ||||||||||||||||||| || ||||| ||||||||| | ||||||| |||||| |||| Sbjct: 2546 tctatgtggtgaggatgggcgggaggtaatccgacttgttcccgaggacgcgggcgcggg 2487 Query: 193 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 252 ||||||||||| |||||| || |||||||| || || ||||||| | |||||| | Sbjct: 2486 tgtcggggaagttctccatcccgggcagctcggtaacgctgccgtcggcagtgacaccga 2427 Query: 253 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 312 | |||||||| || |||||||| |||||||||||||||||||||||||| ||||| | || Sbjct: 2426 tcgggtagctgaggaggtggcccgggaggtcctgctccaggtcgtcgctcgagtacaggt 2367 Query: 313 cccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctccgggcgct 372 |||||||||| ||||||| | |||||||||||| |||||||| |||||||| || |||| Sbjct: 2366 cccagtacttctcggcgacctcgttcaccttctgcacacactctacgctctcgggccgct 2307 Query: 373 ggaacacgtcatccagcatacctaggtgctcgtaccacagcgccatccggaagccgtgga 432 |||| ||||| |||||||| || |||||||||||||| || | |||||||||||| |||| Sbjct: 2306 ggaagacgtcttccagcattcccaggtgctcgtaccaaagagacatccggaagccatgga 2247 Query: 433 tctggccccgggccggctncctgttggctagatggtatggctggtatgcgcccatggcaa 492 ||||||||||||| |||| ||| | || | ||||| |||||||| ||||||||||| | Sbjct: 2246 tctggccccgggcaggctgcctagtcgccaagtggtacggctggtacgcgcccatggcga 2187 Query: 493 ttctcggagtcc 504 ||||||||||| Sbjct: 2186 -tctcggagtcc 2176
>dbj|AK100365.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083O10, full insert sequence Length = 2430 Score = 192 bits (97), Expect = 8e-46 Identities = 147/164 (89%) Strand = Plus / Minus Query: 327 gcgatcctgttcaccttctggacacactcgacgctctccgggcgctggaacacgtcatcc 386 |||||||||||||||||||| |||||||| | |||||| |||||||||||||| |||||| Sbjct: 2428 gcgatcctgttcaccttctgcacacactccaggctctcggggcgctggaacacatcatcc 2369 Query: 387 agcatacctaggtgctcgtaccacagcgccatccggaagccgtggatctggccccgggcc 446 ||||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 2368 agcattcccaggtgctcgtaccacagcgccatccggaagccatggatctggccacgggct 2309 Query: 447 ggctncctgttggctagatggtatggctggtatgcgcccatggc 490 || | |||| | || ||||||||||||||||| |||||||||| Sbjct: 2308 ggttgcctggtcgccagatggtatggctggtacccgcccatggc 2265
>dbj|AK066556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073D11, full insert sequence Length = 1353 Score = 192 bits (97), Expect = 8e-46 Identities = 147/164 (89%) Strand = Plus / Minus Query: 327 gcgatcctgttcaccttctggacacactcgacgctctccgggcgctggaacacgtcatcc 386 |||||||||||||||||||| |||||||| | |||||| |||||||||||||| |||||| Sbjct: 1351 gcgatcctgttcaccttctgcacacactccaggctctcggggcgctggaacacatcatcc 1292 Query: 387 agcatacctaggtgctcgtaccacagcgccatccggaagccgtggatctggccccgggcc 446 ||||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 1291 agcattcccaggtgctcgtaccacagcgccatccggaagccatggatctggccacgggct 1232 Query: 447 ggctncctgttggctagatggtatggctggtatgcgcccatggc 490 || | |||| | || ||||||||||||||||| |||||||||| Sbjct: 1231 ggttgcctggtcgccagatggtatggctggtacccgcccatggc 1188
>gb|AY105267.1| Zea mays PCO139922 mRNA sequence Length = 541 Score = 123 bits (62), Expect = 6e-25 Identities = 137/162 (84%) Strand = Plus / Plus Query: 134 ctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccgggt 193 |||||||||||||||||| || ||||| ||||||||| ||||||||| |||||| ||||| Sbjct: 353 ctatgtggtgaggatgggcgggaggtaatccgacttgttgccgaggacgcgggcacgggt 412 Query: 194 gtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaat 253 ||| |||||| |||||| || |||||||| || || ||||||| | |||||| || Sbjct: 413 gtcagggaagttctccatcccgggcagctcagtaacggtgccgtcggcagtgacaccgat 472 Query: 254 ggggtagctcagcaggtggccggggaggtcctgctccaggtc 295 |||||||| || |||||||| |||||||||||||||||||| Sbjct: 473 cgggtagctgaggaggtggcccgggaggtcctgctccaggtc 514
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 93.7 bits (47), Expect = 5e-16 Identities = 218/275 (79%) Strand = Plus / Plus Query: 156 aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaactccatgcca 215 |||||||| || |||| ||| ||||| || ||| ||||||| ||||||||||||| ||| Sbjct: 83490 aggtagtcggatttggcgccaaggatccgcgcctgggtgtccgggaagaactccacgccg 83549 Query: 216 ggcagctccgtcaccacgccgtcgttggcgacaccaatggggtagctcagcaggtggccg 275 || |||| ||| | ||||||| |||||| || | ||||||| | |||||||||||| Sbjct: 83550 gggagctgcgtgatggtgccgtcgccggcgacgccgacggggtaggtgagcaggtggccg 83609 Query: 276 gggaggtcctgctccaggtcgtcgctggagtataagtcccagtacttgtcggcgatcctg 335 |||||||| ||||| | |||||| || ||| | ||||||| || |||| || || | Sbjct: 83610 gggaggtcgcgctccggcccgtcgccggcgtagaggtcccagcacctgtccgccatggcg 83669 Query: 336 ttcaccttctggacacactcgacgctctccgggcgctggaacacgtcatccagcatacct 395 |||||||| | || || |||| ||||||||| ||||||||| | || || | |||| Sbjct: 83670 ttcaccttgcgcacgcagtcgaggctctccggccgctggaacgcctcgtcgacggtaccg 83729 Query: 396 aggtgctcgtaccacagcgccatccggaagccgtg 430 ||||||||||||||||||||||||| ||| ||||| Sbjct: 83730 aggtgctcgtaccacagcgccatcctgaacccgtg 83764
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 93.7 bits (47), Expect = 5e-16 Identities = 218/275 (79%) Strand = Plus / Plus Query: 156 aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaactccatgcca 215 |||||||| || |||| ||| ||||| || ||| ||||||| ||||||||||||| ||| Sbjct: 4197011 aggtagtcggatttggcgccaaggatccgcgcctgggtgtccgggaagaactccacgccg 4197070 Query: 216 ggcagctccgtcaccacgccgtcgttggcgacaccaatggggtagctcagcaggtggccg 275 || |||| ||| | ||||||| |||||| || | ||||||| | |||||||||||| Sbjct: 4197071 gggagctgcgtgatggtgccgtcgccggcgacgccgacggggtaggtgagcaggtggccg 4197130 Query: 276 gggaggtcctgctccaggtcgtcgctggagtataagtcccagtacttgtcggcgatcctg 335 |||||||| ||||| | |||||| || ||| | ||||||| || |||| || || | Sbjct: 4197131 gggaggtcgcgctccggcccgtcgccggcgtagaggtcccagcacctgtccgccatggcg 4197190 Query: 336 ttcaccttctggacacactcgacgctctccgggcgctggaacacgtcatccagcatacct 395 |||||||| | || || |||| ||||||||| ||||||||| | || || | |||| Sbjct: 4197191 ttcaccttgcgcacgcagtcgaggctctccggccgctggaacgcctcgtcgacggtaccg 4197250 Query: 396 aggtgctcgtaccacagcgccatccggaagccgtg 430 ||||||||||||||||||||||||| ||| ||||| Sbjct: 4197251 aggtgctcgtaccacagcgccatcctgaacccgtg 4197285
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 77.8 bits (39), Expect = 3e-11 Identities = 102/123 (82%) Strand = Plus / Minus Query: 311 gtcccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctccgggcg 370 ||||||||||||||| || ||| |||||||| |||| |||||||| | |||||| ||| Sbjct: 23547991 gtcccagtacttgtcagccatcttgttcaccctctgaacacactccaggctctctgggtt 23547932 Query: 371 ctggaacacgtcatccagcatacctaggtgctcgtaccacagcgccatccggaagccgtg 430 | |||| ||||| |||||| || |||||||| ||||||| || ||||||||| ||||| Sbjct: 23547931 caggaagttgtcatgcagcatgccaaggtgctcataccacaacgacatccggaaaccgtg 23547872 Query: 431 gat 433 ||| Sbjct: 23547871 gat 23547869 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 386 cagcatacctaggtgctcgtaccacagcgccatccggaagccgtggatctggcc 439 |||||| || ||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 23540831 cagcatccccaggtgctcgtaccacagcgacatccggaagccatggatctggcc 23540778 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 393 cctaggtgctcgtaccacagcgccatccggaagccgtggat 433 ||||||||||| ||||| || | |||||||||||| ||||| Sbjct: 23525781 cctaggtgctcataccatagtgacatccggaagccatggat 23525821
>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481H08 Length = 146841 Score = 77.8 bits (39), Expect = 3e-11 Identities = 102/123 (82%) Strand = Plus / Minus Query: 311 gtcccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctccgggcg 370 ||||||||||||||| || ||| |||||||| |||| |||||||| | |||||| ||| Sbjct: 28955 gtcccagtacttgtcagccatcttgttcaccctctgaacacactccaggctctctgggtt 28896 Query: 371 ctggaacacgtcatccagcatacctaggtgctcgtaccacagcgccatccggaagccgtg 430 | |||| ||||| |||||| || |||||||| ||||||| || ||||||||| ||||| Sbjct: 28895 caggaagttgtcatgcagcatgccaaggtgctcataccacaacgacatccggaaaccgtg 28836 Query: 431 gat 433 ||| Sbjct: 28835 gat 28833 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 386 cagcatacctaggtgctcgtaccacagcgccatccggaagccgtggatctggcc 439 |||||| || ||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 21795 cagcatccccaggtgctcgtaccacagcgacatccggaagccatggatctggcc 21742 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 393 cctaggtgctcgtaccacagcgccatccggaagccgtggat 433 ||||||||||| ||||| || | |||||||||||| ||||| Sbjct: 6745 cctaggtgctcataccatagtgacatccggaagccatggat 6785
>dbj|AB001919.1| Oryza sativa (japonica cultivar-group) gene for phospholipase D, complete cds Length = 5169 Score = 77.8 bits (39), Expect = 3e-11 Identities = 102/123 (82%) Strand = Plus / Minus Query: 311 gtcccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctccgggcg 370 ||||||||||||||| || ||| |||||||| |||| |||||||| | |||||| ||| Sbjct: 4733 gtcccagtacttgtcagccatcttgttcaccctctgaacacactccaggctctctgggtt 4674 Query: 371 ctggaacacgtcatccagcatacctaggtgctcgtaccacagcgccatccggaagccgtg 430 | |||| ||||| |||||| || |||||||| ||||||| || ||||||||| ||||| Sbjct: 4673 caggaagttgtcatgcagcatgccaaggtgctcataccacaacgacatccggaaaccgtg 4614 Query: 431 gat 433 ||| Sbjct: 4613 gat 4611
>gb|AF271357.1| Oryza sativa (indica cultivar-group) phospholipase D (RPLD4) gene, complete cds Length = 4740 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 386 cagcatacctaggtgctcgtaccacagcgccatccggaagccgtggatctggcc 439 |||||| || ||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 4030 cagcatccccaggtgctcgtaccacagcgacatccggaagccatggatctggcc 3977
>dbj|AK119861.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-H08, full insert sequence Length = 2783 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 396 aggtgctcgtaccacagcgccatccggaagccgtggatctggcc 439 ||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 2337 aggtgctcgtaccacagcgacatccggaagccatggatctggcc 2294
>dbj|AK072121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122J23, full insert sequence Length = 3145 Score = 69.9 bits (35), Expect = 8e-09 Identities = 101/123 (82%) Strand = Plus / Minus Query: 311 gtcccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctccgggcg 370 ||||||||||||||| || ||| |||||||| |||| |||||||| | |||||| ||| Sbjct: 2418 gtcccagtacttgtcagccatcttgttcaccctctgaacacactccaggctctctgggtt 2359 Query: 371 ctggaacacgtcatccagcatacctaggtgctcgtaccacagcgccatccggaagccgtg 430 | |||| ||||| |||||| || |||||||| |||||| || ||||||||| ||||| Sbjct: 2358 caggaagttgtcatgcagcatgccaaggtgctcaaaccacaacgacatccggaaaccgtg 2299 Query: 431 gat 433 ||| Sbjct: 2298 gat 2296
>ref|XM_450186.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2532 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 471 ggctggtatgcgcccatggcaatt 494 |||||||||||||||||||||||| Sbjct: 2116 ggctggtatgcgcccatggcaatt 2093
>gb|AY758359.1| Fragaria x ananassa phospholipase D alpha mRNA, complete cds Length = 2874 Score = 48.1 bits (24), Expect = 0.028 Identities = 62/75 (82%) Strand = Plus / Minus Query: 381 tcatccagcatacctaggtgctcgtaccacagcgccatccggaagccgtggatctggccc 440 ||||||||||| || || |||||||||||| ||||| ||||| || ||||||||||| Sbjct: 2370 tcatccagcatgccaagtggctcgtaccacaatgccatacggaaaccatggatctggcca 2311 Query: 441 cgggccggctncctg 455 || || |||| |||| Sbjct: 2310 cgtgctggctccctg 2296
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 471 ggctggtatgcgcccatggcaatt 494 |||||||||||||||||||||||| Sbjct: 21095689 ggctggtatgcgcccatggcaatt 21095666
>dbj|AK100579.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105L14, full insert sequence Length = 3079 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 471 ggctggtatgcgcccatggcaatt 494 |||||||||||||||||||||||| Sbjct: 2454 ggctggtatgcgcccatggcaatt 2431
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 471 ggctggtatgcgcccatggcaatt 494 |||||||||||||||||||||||| Sbjct: 116989 ggctggtatgcgcccatggcaatt 116966
>gb|DQ267933.1| Cucumis melo var. inodorus phospholipase D-alpha (PLDa1) mRNA, complete cds Length = 2877 Score = 48.1 bits (24), Expect = 0.028 Identities = 57/68 (83%) Strand = Plus / Minus Query: 141 gtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccgggtgtcgggg 200 ||||||||||| || |||||||| || ||||| ||||| || || || |||||||||| Sbjct: 2527 gtgaggatgggagggaggtagtcggatttggtaccgagtatacgagctttggtgtcgggg 2468 Query: 201 aagaactc 208 |||||||| Sbjct: 2467 aagaactc 2460
>dbj|AB232324.1| Arachis hypogaea plda2 gene for phospholipase D alpha 2, complete cds Length = 3913 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 249 ccaatggggtagctcagcaggtggccggggaggtc 283 |||| |||||||| ||| ||||||||||||||||| Sbjct: 3578 ccaacggggtagcgcagaaggtggccggggaggtc 3544
>dbj|AB232322.1| Arachis hypogaea plda2 mRNA for phospholipase D alpha 2, complete cds Length = 2724 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 249 ccaatggggtagctcagcaggtggccggggaggtc 283 |||| |||||||| ||| ||||||||||||||||| Sbjct: 2363 ccaacggggtagcgcagaaggtggccggggaggtc 2329
>gb|AY232674.1| Mirabilis jalapa phopholipase D mRNA, partial cds Length = 1942 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 atggtatggctggtatgcgcccatggc 490 |||||||||||||||||| |||||||| Sbjct: 1405 atggtatggctggtatgcccccatggc 1379
>gb|AY013252.1| Lycopersicon esculentum phospholipase PLDa1 (PLDa1) mRNA, complete cds Length = 2697 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 381 tcatccagcatacctaggtgctcgtaccaca 411 ||||| |||||||| |||||||||||||||| Sbjct: 2249 tcatcgagcataccaaggtgctcgtaccaca 2219
>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence Length = 209156 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 135 tatgtggtgaggatggggggaag 157 ||||||||||||||||||||||| Sbjct: 92801 tatgtggtgaggatggggggaag 92779
>emb|Z84822.1|NTZ84822 Nicotiana tabacum mRNA for phospholipase D Length = 2723 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 381 tcatccagcatacctaggtgctcgtaccaca 411 ||||| |||||||| |||||||||||||||| Sbjct: 2244 tcatcgagcataccaaggtgctcgtaccaca 2214
>gb|AF201661.1|AF201661 Lycopersicon esculentum phospholipase D alpha mRNA, partial cds Length = 2427 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 381 tcatccagcatacctaggtgctcgtaccaca 411 ||||| |||||||| |||||||||||||||| Sbjct: 2183 tcatcgagcataccaaggtgctcgtaccaca 2153
>ref|NM_112443.1| Arabidopsis thaliana PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1); phospholipase D AT3G15730 (PLDALPHA1) mRNA, complete cds Length = 2795 Score = 44.1 bits (22), Expect = 0.44 Identities = 43/50 (86%) Strand = Plus / Minus Query: 156 aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 205 |||||||| || |||||||||||||| |||||| ||||| |||||||| Sbjct: 2502 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 2453
>ref|XM_470814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2556 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Minus Query: 396 aggtgctcgtaccacagcgccatccggaagccgtggatctggcccc 441 |||||||||| ||||||||| | ||||||||||| | |||||||| Sbjct: 2240 aggtgctcgtgccacagcgcgaggcggaagccgtgcacctggcccc 2195
>gb|BT014735.1| Arabidopsis thaliana At3g15730.1 mRNA sequence Length = 718 Score = 44.1 bits (22), Expect = 0.44 Identities = 43/50 (86%) Strand = Plus / Minus Query: 156 aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 205 |||||||| || |||||||||||||| |||||| ||||| |||||||| Sbjct: 696 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 647
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Minus Query: 396 aggtgctcgtaccacagcgccatccggaagccgtggatctggcccc 441 |||||||||| ||||||||| | ||||||||||| | |||||||| Sbjct: 15516497 aggtgctcgtgccacagcgcgaggcggaagccgtgcacctggcccc 15516452
>gb|AC099323.6| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genomic sequence, complete sequence Length = 115079 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Minus Query: 396 aggtgctcgtaccacagcgccatccggaagccgtggatctggcccc 441 |||||||||| ||||||||| | ||||||||||| | |||||||| Sbjct: 16048 aggtgctcgtgccacagcgcgaggcggaagccgtgcacctggcccc 16003
>gb|AF428278.1|AF428278 Arabidopsis thaliana AT3g15730/MSJ11_13 mRNA, complete cds Length = 1886 Score = 44.1 bits (22), Expect = 0.44 Identities = 43/50 (86%) Strand = Plus / Minus Query: 156 aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 205 |||||||| || |||||||||||||| |||||| ||||| |||||||| Sbjct: 1597 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 1548
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Minus Query: 396 aggtgctcgtaccacagcgccatccggaagccgtggatctggcccc 441 |||||||||| ||||||||| | ||||||||||| | |||||||| Sbjct: 15511031 aggtgctcgtgccacagcgcgaggcggaagccgtgcacctggcccc 15510986
>gb|BT003026.1| Arabidopsis thaliana At3g15730/MSJ11_13 gene, complete cds Length = 1572 Score = 44.1 bits (22), Expect = 0.44 Identities = 43/50 (86%) Strand = Plus / Minus Query: 156 aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 205 |||||||| || |||||||||||||| |||||| ||||| |||||||| Sbjct: 1550 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 1501
>dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSJ11 Length = 81370 Score = 44.1 bits (22), Expect = 0.44 Identities = 43/50 (86%) Strand = Plus / Minus Query: 156 aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 205 |||||||| || |||||||||||||| |||||| ||||| |||||||| Sbjct: 42804 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 42755
>dbj|AK105821.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-D07, full insert sequence Length = 1414 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Minus Query: 396 aggtgctcgtaccacagcgccatccggaagccgtggatctggcccc 441 |||||||||| ||||||||| | ||||||||||| | |||||||| Sbjct: 1002 aggtgctcgtgccacagcgcgaggcggaagccgtgcacctggcccc 957
>gb|AF451980.2| Papaver somniferum phospholipase D2 (PLD2) mRNA, complete cds Length = 2636 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 312 tcccagtacttgtcggcgatcctgttcaccttctggacaca 352 |||||||| || || ||||||||||||||||| || ||||| Sbjct: 2264 tcccagtatttatcagcgatcctgttcaccttttgcacaca 2224
>gb|AF451979.2| Papaver somniferum phospholipase D1 (PLD1) mRNA, complete cds Length = 2679 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 312 tcccagtacttgtcggcgatcctgttcaccttctggacaca 352 |||||||| || || ||||||||||||||||| || ||||| Sbjct: 2264 tcccagtatttatcagcgatcctgttcaccttttgcacaca 2224
>emb|X56656.1|LEPHOA L.enzymogenes phoA gene for secreted alkaline phosphatase Length = 2292 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 caccacgccgtcgttggcgac 247 ||||||||||||||||||||| Sbjct: 1948 caccacgccgtcgttggcgac 1928
>gb|AF271356.1| Oryza sativa (indica cultivar-group) phospholipase D (RPLD3) gene, complete cds Length = 6672 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 393 cctaggtgctcgtaccacagcgccatccggaagccgtggat 433 ||||||||||| ||||| || | |||||||||||| ||||| Sbjct: 5914 cctaggtgctcataccatagtgacatccggaagccatggat 5874
>dbj|BS000229.1| Pan troglodytes chromosome 22 clone:RP43-015P20, map 22, complete sequences Length = 179285 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 aagaactccatgccaggcagc 221 ||||||||||||||||||||| Sbjct: 53521 aagaactccatgccaggcagc 53541
>dbj|AK121264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D06, full insert sequence Length = 2762 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 393 cctaggtgctcgtaccacagcgccatccggaagccgtggat 433 ||||||||||| ||||| || | |||||||||||| ||||| Sbjct: 2306 cctaggtgctcataccatagtgacatccggaagccatggat 2266
>dbj|AK100278.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073L15, full insert sequence Length = 2821 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 393 cctaggtgctcgtaccacagcgccatccggaagccgtggat 433 ||||||||||| ||||| || | |||||||||||| ||||| Sbjct: 2306 cctaggtgctcataccatagtgacatccggaagccatggat 2266
>gb|AF113918.1|AF113918 Brassica oleracea var. capitata phospholipase D1 (PLD1) gene, complete cds Length = 3404 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 297 tcgctggagtataagtcccagtacttgtc 325 ||||| |||||||||||||| |||||||| Sbjct: 3241 tcgctcgagtataagtcccaatacttgtc 3213
>dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, section 91/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 aagaactccatgccaggcagc 221 ||||||||||||||||||||| Sbjct: 146957 aagaactccatgccaggcagc 146977
>gb|AF090445.1|AF090445 Brassica oleracea phospholipase D1 (PLD1) mRNA, complete cds Length = 2793 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 297 tcgctggagtataagtcccagtacttgtc 325 ||||| |||||||||||||| |||||||| Sbjct: 2353 tcgctcgagtataagtcccaatacttgtc 2325
>gb|AF451982.2| Papaver somniferum phospholipase D2 (PLD2) gene, complete cds Length = 2828 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 312 tcccagtacttgtcggcgatcctgttcaccttctggacaca 352 |||||||| || || ||||||||||||||||| || ||||| Sbjct: 2624 tcccagtatttatcagcgatcctgttcaccttttgcacaca 2584
>gb|AF451981.2| Papaver somniferum phospholipase D1 (PLD1) gene, complete cds Length = 2829 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 312 tcccagtacttgtcggcgatcctgttcaccttctggacaca 352 |||||||| || || ||||||||||||||||| || ||||| Sbjct: 2624 tcccagtatttatcagcgatcctgttcaccttttgcacaca 2584
>dbj|AP001626.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1559F8, MX1-D21S171 region, complete sequence Length = 145762 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 aagaactccatgccaggcagc 221 ||||||||||||||||||||| Sbjct: 78005 aagaactccatgccaggcagc 78025
>dbj|AB017602.1| Homo sapiens PDE9A gene for cGMP phosphodiesterase, complete cds Length = 125000 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 aagaactccatgccaggcagc 221 ||||||||||||||||||||| Sbjct: 1390 aagaactccatgccaggcagc 1410
>gb|BC032099.2| Homo sapiens pygopus homolog 2 (Drosophila), mRNA (cDNA clone MGC:20502 IMAGE:4126360), complete cds Length = 3190 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gtggtgaggatggggggaag 157 |||||||||||||||||||| Sbjct: 936 gtggtgaggatggggggaag 955
>gb|BC013725.1| Homo sapiens pygopus homolog 2 (Drosophila), mRNA (cDNA clone IMAGE:3859726), partial cds Length = 2508 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gtggtgaggatggggggaag 157 |||||||||||||||||||| Sbjct: 246 gtggtgaggatggggggaag 265
>ref|XM_525221.1| PREDICTED: Pan troglodytes similar to Pygopus homolog 2 (LOC469836), mRNA Length = 1083 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gtggtgaggatggggggaag 157 |||||||||||||||||||| Sbjct: 626 gtggtgaggatggggggaag 645
>ref|XM_593770.2| PREDICTED: Bos taurus similar to Pygopus homolog 2 (LOC540401), mRNA Length = 1773 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gtggtgaggatggggggaag 157 |||||||||||||||||||| Sbjct: 1106 gtggtgaggatggggggaag 1125
>ref|NM_138300.3| Homo sapiens pygopus homolog 2 (Drosophila) (PYGO2), mRNA Length = 3227 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gtggtgaggatggggggaag 157 |||||||||||||||||||| Sbjct: 970 gtggtgaggatggggggaag 989
>gb|AC132454.3| Mus musculus BAC clone RP23-127P22 from chromosome 19, complete sequence Length = 225152 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 tttctgaaacacaagttctg 78 |||||||||||||||||||| Sbjct: 136964 tttctgaaacacaagttctg 136945
>emb|AL451085.20| Human DNA sequence from clone RP11-307C12 on chromosome 1 Contains the PMVK gene for phosphomevalonate kinase, the PBXIP1 gene for pre-B-cell leukemia transcription factor interacting protein 1, the gene for pygopus 2 (PYGO2), the SHC1 gene for SHC (Src homology 2 domain containing) transforming protein 1, the CKS1B gene for CDC28 protein kinase regulatory subunit 1B, the gene for FAD-synthetase (PP591), the LENEP gene for lens epithelial protein, the ZFP67 gene for zinc finger protein 67 homolog (mouse), the gene for a novel protein (FLJ32934), a novel gene, the gene for a novel protein (FLJ32785) the 5' end of the ADAM15 gene for a disintegrin and metalloproteinase domain 15 (metargidin), and two CpG islands, complete sequence Length = 182166 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 gtggtgaggatggggggaag 157 |||||||||||||||||||| Sbjct: 87674 gtggtgaggatggggggaag 87655
>emb|CR860452.1| Pongo pygmaeus mRNA; cDNA DKFZp459G041 (from clone DKFZp459G041) Length = 3222 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gtggtgaggatggggggaag 157 |||||||||||||||||||| Sbjct: 993 gtggtgaggatggggggaag 1012
>dbj|AB232323.1| Arachis hypogaea plda1 gene for phospholipase D alpha 1, complete cds Length = 3471 Score = 40.1 bits (20), Expect = 6.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 396 aggtgctcgtaccacagcgccatccggaagccgtggatctggcc 439 |||||||||||||| || | ||| |||||||| ||||| ||||| Sbjct: 3001 aggtgctcgtaccatagggacatgcggaagccatggatttggcc 2958
>dbj|AB232321.1| Arachis hypogaea plda1 mRNA for phospholipase D alpha 1, complete cds Length = 2631 Score = 40.1 bits (20), Expect = 6.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 396 aggtgctcgtaccacagcgccatccggaagccgtggatctggcc 439 |||||||||||||| || | ||| |||||||| ||||| ||||| Sbjct: 2135 aggtgctcgtaccatagggacatgcggaagccatggatttggcc 2092
>emb|CR624320.1| full-length cDNA clone CS0DL007YH03 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 2734 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gtggtgaggatggggggaag 157 |||||||||||||||||||| Sbjct: 540 gtggtgaggatggggggaag 559
>dbj|AK095899.1| Homo sapiens cDNA FLJ38580 fis, clone HCHON2008582, highly similar to FERRITIN HEAVY CHAIN Length = 2034 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gtggtgaggatggggggaag 157 |||||||||||||||||||| Sbjct: 810 gtggtgaggatggggggaag 829
>dbj|AK092389.1| Homo sapiens cDNA FLJ35070 fis, clone PLACE5000139 Length = 3128 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gtggtgaggatggggggaag 157 |||||||||||||||||||| Sbjct: 919 gtggtgaggatggggggaag 938
>dbj|AK090545.1| Homo sapiens cDNA FLJ33226 fis, clone ASTRO2001029 Length = 2497 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gtggtgaggatggggggaag 157 |||||||||||||||||||| Sbjct: 288 gtggtgaggatggggggaag 307
>gb|AF457208.1| Homo sapiens pygopus 2 (PYGO2) mRNA, complete cds Length = 1221 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gtggtgaggatggggggaag 157 |||||||||||||||||||| Sbjct: 764 gtggtgaggatggggggaag 783
>gb|AF289598.1|AF289598 Homo sapiens clone pp7910 unknown mRNA Length = 2977 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gtggtgaggatggggggaag 157 |||||||||||||||||||| Sbjct: 720 gtggtgaggatggggggaag 739
>gb|AY013254.1| Lycopersicon esculentum phospholipase PLDa3 (PLDa3) mRNA, partial cds Length = 2903 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 393 cctaggtgctcgtaccacagcgccatccggaa 424 |||| ||||||||||||||| ||||| ||||| Sbjct: 2135 cctaagtgctcgtaccacagtgccattcggaa 2104
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 ggcgatcctgttcaccttct 345 |||||||||||||||||||| Sbjct: 3543937 ggcgatcctgttcaccttct 3543956
>ref|XM_309387.2| Anopheles gambiae str. PEST ENSANGP00000014937 (ENSANGG00000012448), partial mRNA Length = 2436 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 tgtcggcgatcctgttcacc 341 |||||||||||||||||||| Sbjct: 1376 tgtcggcgatcctgttcacc 1395
>gb|BC006132.1| Homo sapiens pygopus homolog 2 (Drosophila), mRNA (cDNA clone MGC:13050 IMAGE:3627860), complete cds Length = 3193 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gtggtgaggatggggggaag 157 |||||||||||||||||||| Sbjct: 936 gtggtgaggatggggggaag 955
>emb|BX908754.8| Zebrafish DNA sequence from clone DKEY-196D8 in linkage group 18, complete sequence Length = 94961 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 ctataacaacctgctattttctga 65 |||||||| ||||||||||||||| Sbjct: 39144 ctataacaccctgctattttctga 39167
>gb|AF154425.1| Lycopersicon esculentum phospholipase D (TPLD) mRNA, complete cds Length = 2848 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 393 cctaggtgctcgtaccacagcgccatccggaa 424 |||| ||||||||||||||| ||||| ||||| Sbjct: 2310 cctaagtgctcgtaccacagtgccattcggaa 2279
>gb|AY294150.1| Platyamoeba placida small subunit ribosomal RNA gene, partial sequence Length = 1893 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tgaatcaccaaaggaaccac 96 |||||||||||||||||||| Sbjct: 238 tgaatcaccaaaggaaccac 219 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,208,883 Number of Sequences: 3902068 Number of extensions: 3208883 Number of successful extensions: 70365 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 70098 Number of HSP's gapped (non-prelim): 258 length of query: 504 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 482 effective length of database: 17,147,199,772 effective search space: 8264950290104 effective search space used: 8264950290104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)