Clone Name | rbasd24e20 |
---|---|
Clone Library Name | barley_pub |
>emb|BX950186.10| Zebrafish DNA sequence from clone CH211-103O18 in linkage group 15, complete sequence Length = 140307 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 atcttcccttttcagctcctt 314 ||||||||||||||||||||| Sbjct: 137138 atcttcccttttcagctcctt 137118
>emb|CR762418.5| Zebrafish DNA sequence from clone RP71-15A9 in linkage group 19, complete sequence Length = 147881 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 caagacaattgctttttcaat 416 ||||||||||||||||||||| Sbjct: 75230 caagacaattgctttttcaat 75210
>gb|AC010342.5|AC010342 Homo sapiens chromosome 5 clone CTD-2015B23, complete sequence Length = 126010 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 caaactaccttattacaaata 163 ||||||||||||||||||||| Sbjct: 45639 caaactaccttattacaaata 45659
>emb|BX640464.10| Zebrafish DNA sequence from clone DKEY-22M8 in linkage group 19, complete sequence Length = 255824 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 caagacaattgctttttcaat 416 ||||||||||||||||||||| Sbjct: 246931 caagacaattgctttttcaat 246911
>gb|AC116706.12| Mus musculus chromosome 1, clone RP23-37D15, complete sequence Length = 167357 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 atcttcccttttcagctcct 313 |||||||||||||||||||| Sbjct: 2214 atcttcccttttcagctcct 2195
>gb|DQ465384.1| Oreochromis mossambicus clone SSH #509 mitochondrial isocitrate dehydrogenase 2-like mRNA, complete cds; nuclear gene for mitochondrial product Length = 1674 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 acgaagacagagttgaagagtttg 383 |||||| ||||||||||||||||| Sbjct: 423 acgaagccagagttgaagagtttg 446
>emb|AL513322.18| Human DNA sequence from clone RP11-332M15 on chromosome 1 Contains the 5' end of the SIL gene for TAL1 (SCL) interrupting locus, the 5' end of the gene for UMP-CMP kinase (UMP-CMPK) and a CpG island, complete sequence Length = 68049 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 ttttgcctcaccttgtcatccctg 336 ||||||||||||||||||| |||| Sbjct: 54331 ttttgcctcaccttgtcattcctg 54354
>emb|AL034561.5|HS692C8 Human DNA sequence from clone RP4-692C8 on chromosome 20p11.22-12.2 Contains GSSs and STSs, complete sequence Length = 125698 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 gaacatcttatcttcatttt 355 |||||||||||||||||||| Sbjct: 71949 gaacatcttatcttcatttt 71968
>gb|AC131386.2| Homo sapiens chromosome 5 clone CTD-3179P9, complete sequence Length = 169076 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 ttttctacgaagacagagtt 373 |||||||||||||||||||| Sbjct: 121247 ttttctacgaagacagagtt 121266
>gb|AC114313.2| Homo sapiens chromosome 5 clone RP11-30D9, complete sequence Length = 109840 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 ttttctacgaagacagagtt 373 |||||||||||||||||||| Sbjct: 101011 ttttctacgaagacagagtt 101030
>gb|AC117576.11| Mus musculus chromosome 1, clone RP23-34E15, complete sequence Length = 200174 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 atcttcccttttcagctcct 313 |||||||||||||||||||| Sbjct: 34195 atcttcccttttcagctcct 34214
>emb|AL928789.4| Mouse DNA sequence from clone RP23-435F21 on chromosome 2, complete sequence Length = 202887 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 acaagcacaaacagaacatg 64 |||||||||||||||||||| Sbjct: 112703 acaagcacaaacagaacatg 112684 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,432,919 Number of Sequences: 3902068 Number of extensions: 5432919 Number of successful extensions: 81220 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81201 Number of HSP's gapped (non-prelim): 19 length of query: 429 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 407 effective length of database: 17,147,199,772 effective search space: 6978910307204 effective search space used: 6978910307204 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)