ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24e19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete ... 432 e-118
2emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clo... 428 e-117
3emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clo... 387 e-104
4gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete ... 379 e-102
5emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clo... 283 1e-73
6emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clo... 276 3e-71
7gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, comple... 276 3e-71
8gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete ... 266 3e-68
9gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, comple... 264 1e-67
10emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clo... 264 1e-67
11emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin 109 4e-21
12dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds 46 0.054
13gb|AC149153.3| Xenopus tropicalis clone ISB-221D20, complete seq... 42 0.84
14emb|BX248402.13| Zebrafish DNA sequence from clone CH211-226P14 ... 42 0.84
15emb|BX004990.12| Zebrafish DNA sequence from clone DKEY-12H12, c... 42 0.84
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.84
17dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.84
18dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds 42 0.84
19gb|AC101677.8| Mus musculus chromosome 10, clone RP23-138N1, com... 40 3.3
20emb|CR931735.1| Medicago truncatula chromosome 5 clone mth2-37f4... 40 3.3
21gb|AC146572.11| Medicago truncatula clone mth2-104c10, complete ... 40 3.3
22gb|AC022395.4| Homo sapiens chromosome 10 clone RP11-354M20, com... 40 3.3
23gb|AC026188.6| Homo sapiens chromosome 3 clone RP11-319I18 map 3... 40 3.3
24gb|AC158631.6| Mus musculus 10 BAC RP23-424I1 (Roswell Park Canc... 40 3.3
25gb|AC133435.2| Homo sapiens 3 BAC RP11-343B5 (Roswell Park Cance... 40 3.3
26gb|AC084654.1|CBRG45O23 Caenorhabditis briggsae cosmid G45O23, c... 40 3.3
27gb|AY128102.1| Lycopersicon esculentum isolate vis1-lta small he... 40 3.3
28gb|AY128101.1| Lycopersicon esculentum isolate vis1-hta small he... 40 3.3
29gb|AC008498.3|AC008498 Homo sapiens chromosome 5 clone CTC-436P1... 40 3.3
30gb|AC155325.5| Mus musculus 10 BAC RP24-86C24 (Roswell Park Canc... 40 3.3
31gb|AC005879.3|AC005879 citb_287_c_20, complete sequence 40 3.3
32gb|AC150897.2| Mus musculus BAC clone RP23-289F7 from 7, complet... 40 3.3
33gb|AY487430.1| Uncultured organism clone 2A15 nitrilase (BD5338)... 40 3.3
34gb|AC068314.6| Homo sapiens chromosome 3 clone RP11-194D21 map 3... 40 3.3 
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940
          Length = 663

 Score =  432 bits (218), Expect = e-118
 Identities = 249/257 (96%), Gaps = 2/257 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cataatatatgcntggcaacttttatattaagcca-gggtataaatagattcatcgtggt 59
           |||||||||| | ||| |||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 658 cataatatatccatgg-aacttttatattaagccaagggtataaatagattcatcgtggg 600

                                                                       
Query: 60  aactcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttc 119
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ttctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttc 540

                                                                       
Query: 120 gatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 480

                                                                       
Query: 180 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacatcaccatcattac 239
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 479 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattac 420

                            
Query: 240 agaaacgggcacatgcg 256
           |||||||||||||||||
Sbjct: 419 agaaacgggcacatgcg 403
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>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3)
          Length = 491

 Score =  428 bits (216), Expect = e-117
 Identities = 235/240 (97%), Gaps = 1/240 (0%)
 Strand = Plus / Minus

                                                                       
Query: 18  aacttttatattaagcca-gggtataaatagattcatcgtggtaactcttattggaacga 76
           |||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 483 aacttttatattaagccaagggcataaatagattcatcgtggtgactcttattggaacga 424

                                                                       
Query: 77  gggaaaaaacagaaatacataactaagatgatacatttgcttcgatctggtgatggtatc 136
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gggaaaaaacagaaatacataactaagatgatacatttgcttcgatctggtgatggtatc 364

                                                                       
Query: 137 aagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaagg 196
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 363 aagattgttgaacagaaaatgaaaaaacgaccttggccatagaaatcatgcccaagaagg 304

                                                                       
Query: 197 catgattaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcg 256
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 303 catgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcg 244
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>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3)
          Length = 544

 Score =  387 bits (195), Expect = e-104
 Identities = 210/215 (97%)
 Strand = Plus / Minus

                                                                       
Query: 42  aaatagattcatcgtggtaactcttattggaacgagggaaaaaacagaaatacataacta 101
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aaatagattcatcgtggcgactcttattggaacgagggaaaaaacagaaatacataacta 485

                                                                       
Query: 102 agatgatacatttgcttcgatctggtgatggtatcaagattgttgaacagaaaatgacaa 161
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 484 agatgatacatttgcttcgatgtggtgatggtatcaagattgttgaacagaaaatgacaa 425

                                                                       
Query: 162 aacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagactgaa 221
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 424 aacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaagagactgaa 365

                                              
Query: 222 tgacatcaccatcattacagaaacgggcacatgcg 256
           |||| ||||||||||||||||||||||||||||||
Sbjct: 364 tgacttcaccatcattacagaaacgggcacatgcg 330
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>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348
          Length = 608

 Score =  379 bits (191), Expect = e-102
 Identities = 194/195 (99%)
 Strand = Plus / Minus

                                                                       
Query: 62  ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 538

                                                                       
Query: 122 tctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaa 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaa 478

                                                                       
Query: 182 tcatgcccaagaaggcatgattaggcttcaacagactgaatgacatcaccatcattacag 241
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 477 tcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacag 418

                          
Query: 242 aaacgggcacatgcg 256
           |||||||||||||||
Sbjct: 417 aaacgggcacatgcg 403
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>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4)
          Length = 658

 Score =  283 bits (143), Expect = 1e-73
 Identities = 233/258 (90%), Gaps = 4/258 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   cataatatatgcntggcaacttttatattaagcca-gggtataaatagattcatcgtggt 59
           |||||||||| | ||| |||||||||||||||||| ||||| ||||||||||||||||| 
Sbjct: 640 cataatatatccatgg-aacttttatattaagccaagggtacaaatagattcatcgtggc 582

                                                                       
Query: 60  aactcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttc 119
            || ||||||||||| ||||||||| ||||||| ||||| ||||||||||||||| ||||
Sbjct: 581 gacccttattggaacaagggaaaaa-cagaaatgcataagtaagatgatacatttccttc 523

                                                                       
Query: 120 gat-ctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatag 178
           ||| | | |||||||||||||||| || || | |||||||||| ||||||||||||||||
Sbjct: 522 gatacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatag 463

                                                                       
Query: 179 aaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacatcaccatcatta 238
           ||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 462 aaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcatta 403

                             
Query: 239 cagaaacgggcacatgcg 256
           || |||||||||||||||
Sbjct: 402 caaaaacgggcacatgcg 385
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>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4)
          Length = 637

 Score =  276 bits (139), Expect = 3e-71
 Identities = 232/258 (89%), Gaps = 4/258 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   cataatatatgcntggcaacttttatattaagcca-gggtataaatagattcatcgtggt 59
           |||||||||| | ||| |||||||||||||||||| ||||| ||||||||||||||||| 
Sbjct: 633 cataatatatccatgg-aacttttatattaagccaagggtacaaatagattcatcgtggc 575

                                                                       
Query: 60  aactcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttc 119
            |||||||||||||| |||||||||  | |||||||||| |||||||||||||| |||||
Sbjct: 574 gactcttattggaacaagggaaaaag-acaaatacataagtaagatgatacattggcttc 516

                                                                       
Query: 120 gat-ctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatag 178
            || | | |||||||||||||||| || || | |||||||||| |||||| |||||||||
Sbjct: 515 catacagctgatggtatcaagattattcaagacaaaatgacaatacgaccatggccatag 456

                                                                       
Query: 179 aaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacatcaccatcatta 238
           ||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 455 aaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcatta 396

                             
Query: 239 cagaaacgggcacatgcg 256
           ||||||||||||||||||
Sbjct: 395 cagaaacgggcacatgcg 378
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>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds
          Length = 2406

 Score =  276 bits (139), Expect = 3e-71
 Identities = 232/258 (89%), Gaps = 4/258 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    cataatatatgcntggcaacttttatattaagcca-gggtataaatagattcatcgtggt 59
            |||||||||| | ||| |||||||||||||||||| ||||| ||||||||||||||||| 
Sbjct: 2333 cataatatatccatgg-aacttttatattaagccaagggtacaaatagattcatcgtggc 2275

                                                                        
Query: 60   aactcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttc 119
             |||||| ||||||| |||||||||  | |||||||||| |||||||||||||| |||||
Sbjct: 2274 gactcttgttggaacaagggaaaaag-acaaatacataagtaagatgatacattggcttc 2216

                                                                        
Query: 120  gat-ctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatag 178
             || | | |||||||||||||||| || || | |||||||||| ||||||||||||||||
Sbjct: 2215 catacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatag 2156

                                                                        
Query: 179  aaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacatcaccatcatta 238
            ||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 2155 aaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcatta 2096

                              
Query: 239  cagaaacgggcacatgcg 256
            ||||||||||||||||||
Sbjct: 2095 cagaaacgggcacatgcg 2078
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>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872
          Length = 540

 Score =  266 bits (134), Expect = 3e-68
 Identities = 137/138 (99%)
 Strand = Plus / Minus

                                                                       
Query: 119 cgatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatag 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 cgatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatag 481

                                                                       
Query: 179 aaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacatcaccatcatta 238
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 480 aaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcatta 421

                             
Query: 239 cagaaacgggcacatgcg 256
           ||||||||||||||||||
Sbjct: 420 cagaaacgggcacatgcg 403
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>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds
          Length = 2259

 Score =  264 bits (133), Expect = 1e-67
 Identities = 136/137 (99%)
 Strand = Plus / Minus

                                                                        
Query: 120  gatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2237 gatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 2178

                                                                        
Query: 180  aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacatcaccatcattac 239
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2177 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattac 2118

                             
Query: 240  agaaacgggcacatgcg 256
            |||||||||||||||||
Sbjct: 2117 agaaacgggcacatgcg 2101
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>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2)
          Length = 453

 Score =  264 bits (133), Expect = 1e-67
 Identities = 214/237 (90%), Gaps = 3/237 (1%)
 Strand = Plus / Minus

                                                                       
Query: 22  tttatattaagcca-gggtataaatagattcatcgtggtaactcttattggaacgaggga 80
           |||||||||||||| ||||| |||||||||||||||||  || ||||||||||| |||||
Sbjct: 440 tttatattaagccaagggtacaaatagattcatcgtggcgacccttattggaacaaggga 381

                                                                       
Query: 81  aaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatggtatcaag 139
           |||| ||||||| ||||| ||||||||||||||| ||||||| | | |||||||||||||
Sbjct: 380 aaaa-cagaaatgcataagtaagatgatacatttccttcgatacagctgatggtatcaag 322

                                                                       
Query: 140 attgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcat 199
           ||| || || | |||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 321 attattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaaggcat 262

                                                                    
Query: 200 gattaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcg 256
           ||||||| ||||||||||||||||||  ||||||||||||| |||||||||||||||
Sbjct: 261 gattaggattcaacagactgaatgactgcaccatcattacaaaaacgggcacatgcg 205
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>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin
          Length = 414

 Score =  109 bits (55), Expect = 4e-21
 Identities = 55/55 (100%)
 Strand = Plus / Minus

                                                                  
Query: 202 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcg 256
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcg 360
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>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds
          Length = 678

 Score = 46.1 bits (23), Expect = 0.054
 Identities = 83/103 (80%)
 Strand = Plus / Minus

                                                                       
Query: 154 aatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaac 213
           |||| |||||||||| ||||||||||||| | || | |||  ||||||||||||  | ||
Sbjct: 558 aatggcaaaacgaccatggccatagaaataaggcacgagagtgcatgattaggccccgac 499

                                                      
Query: 214 agactgaatgacatcaccatcattacagaaacgggcacatgcg 256
           |||  || ||||  |||| |  |||||||||||| ||||||||
Sbjct: 498 agatggattgacggcacccttgttacagaaacggacacatgcg 456



 Score = 42.1 bits (21), Expect = 0.84
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 47  gattcatcgtggtaactcttattggaacgagggaaaa 83
           ||||||||||| ||||||||||| ||| || ||||||
Sbjct: 671 gattcatcgtgataactcttatttgaatgatggaaaa 635
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>gb|AC149153.3| Xenopus tropicalis clone ISB-221D20, complete sequence
          Length = 58609

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 80   aaaaaacagaaatacataact 100
            |||||||||||||||||||||
Sbjct: 8230 aaaaaacagaaatacataact 8210
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>emb|BX248402.13| Zebrafish DNA sequence from clone CH211-226P14 in linkage group 14,
             complete sequence
          Length = 137130

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 221   atgacatcaccatcattacagaaac 245
             |||||||||||||||||||| ||||
Sbjct: 27486 atgacatcaccatcattacataaac 27462
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>emb|BX004990.12| Zebrafish DNA sequence from clone DKEY-12H12, complete sequence
          Length = 201461

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 221    atgacatcaccatcattacagaaac 245
              |||||||||||||||||||| ||||
Sbjct: 188699 atgacatcaccatcattacataaac 188723
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 136     caagattgttgaacagaaaat 156
               |||||||||||||||||||||
Sbjct: 6740764 caagattgttgaacagaaaat 6740784
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>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1131G07
          Length = 133992

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 136   caagattgttgaacagaaaat 156
             |||||||||||||||||||||
Sbjct: 61817 caagattgttgaacagaaaat 61837
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>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds
          Length = 641

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 165 gaccttggccatagaaatcatgcccaagaaggcatgattaggctt 209
           ||||| ||||| ||||||||||| |||||  ||||||||| ||||
Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagctt 452
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>gb|AC101677.8| Mus musculus chromosome 10, clone RP23-138N1, complete sequence
          Length = 206087

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   atgacatcaccatcattaca 240
             ||||||||||||||||||||
Sbjct: 32100 atgacatcaccatcattaca 32119
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>emb|CR931735.1| Medicago truncatula chromosome 5 clone mth2-37f4, COMPLETE SEQUENCE
          Length = 114414

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    aaatacataactaagatgat 108
             ||||||||||||||||||||
Sbjct: 70952 aaatacataactaagatgat 70971
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>gb|AC146572.11| Medicago truncatula clone mth2-104c10, complete sequence
          Length = 109548

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  aaatacataactaagatgat 108
           ||||||||||||||||||||
Sbjct: 645 aaatacataactaagatgat 664
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>gb|AC022395.4| Homo sapiens chromosome 10 clone RP11-354M20, complete sequence
          Length = 193669

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    aactaagatgatacatttgc 116
             ||||||||||||||||||||
Sbjct: 96493 aactaagatgatacatttgc 96512
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>gb|AC026188.6| Homo sapiens chromosome 3 clone RP11-319I18 map 3p, complete sequence
          Length = 177721

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    aagattgttgaacagaaaat 156
              ||||||||||||||||||||
Sbjct: 113658 aagattgttgaacagaaaat 113677
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>gb|AC158631.6| Mus musculus 10 BAC RP23-424I1 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 206425

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   atgacatcaccatcattaca 240
             ||||||||||||||||||||
Sbjct: 52069 atgacatcaccatcattaca 52050
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>gb|AC133435.2| Homo sapiens 3 BAC RP11-343B5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 116556

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   cagactgaatgacatcacca 232
             ||||||||||||||||||||
Sbjct: 64821 cagactgaatgacatcacca 64802
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>gb|AC084654.1|CBRG45O23 Caenorhabditis briggsae cosmid G45O23, complete sequence
          Length = 34686

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    acagaaatacataactaaga 104
             ||||||||||||||||||||
Sbjct: 19747 acagaaatacataactaaga 19766
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>gb|AY128102.1| Lycopersicon esculentum isolate vis1-lta small heat shock protein
            (vis1) gene, complete cds
          Length = 2257

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 61   actcttattggaacgagggaaaaa 84
            |||||||||||||||| |||||||
Sbjct: 1736 actcttattggaacgaaggaaaaa 1713
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>gb|AY128101.1| Lycopersicon esculentum isolate vis1-hta small heat shock protein
            (vis1) gene, complete cds
          Length = 2224

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 61   actcttattggaacgagggaaaaa 84
            |||||||||||||||| |||||||
Sbjct: 1703 actcttattggaacgaaggaaaaa 1680
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>gb|AC008498.3|AC008498 Homo sapiens chromosome 5 clone CTC-436P18, complete sequence
          Length = 217898

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     aaaaaacagaaatacataac 99
              ||||||||||||||||||||
Sbjct: 161134 aaaaaacagaaatacataac 161153
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>gb|AC155325.5| Mus musculus 10 BAC RP24-86C24 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 171402

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   atgacatcaccatcattaca 240
             ||||||||||||||||||||
Sbjct: 34723 atgacatcaccatcattaca 34704
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>gb|AC005879.3|AC005879 citb_287_c_20, complete sequence
          Length = 190982

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    aactaagatgatacatttgc 116
             ||||||||||||||||||||
Sbjct: 32396 aactaagatgatacatttgc 32377
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>gb|AC150897.2| Mus musculus BAC clone RP23-289F7 from 7, complete sequence
          Length = 227073

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     aaaaaacagaaatacataac 99
              ||||||||||||||||||||
Sbjct: 101064 aaaaaacagaaatacataac 101083
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>gb|AY487430.1| Uncultured organism clone 2A15 nitrilase (BD5338) gene, complete
           cds
          Length = 1047

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 167 ccttggccatagaaatcatgccca 190
           |||||||||| |||||||||||||
Sbjct: 862 ccttggccattgaaatcatgccca 839
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>gb|AC068314.6| Homo sapiens chromosome 3 clone RP11-194D21 map 3p, complete sequence
          Length = 179814

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 137  aagattgttgaacagaaaat 156
            ||||||||||||||||||||
Sbjct: 3697 aagattgttgaacagaaaat 3716


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,707,245
Number of Sequences: 3902068
Number of extensions: 2707245
Number of successful extensions: 56608
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56522
Number of HSP's gapped (non-prelim): 72
length of query: 257
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 235
effective length of database: 17,147,199,772
effective search space: 4029591946420
effective search space used: 4029591946420
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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