ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23p06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ315794.1|HVU315794 Hordeum vulgare mRNA for Ribosomal prot... 569 e-159
2gb|AY846832.1| Triticum aestivum ribosomal protein S7 mRNA, comp... 375 e-101
3gb|AF542971.1| Triticum aestivum ribosomal protein S7 mRNA, part... 343 2e-91
4gb|AY290724.1| Triticum aestivum ribosomal protein S7-like mRNA,... 343 2e-91
5dbj|AK122143.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 2e-63
6dbj|AK059192.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 2e-63
7gb|BT016582.1| Zea mays clone Contig415 mRNA sequence 226 3e-56
8gb|AY103554.1| Zea mays PCO154340 mRNA sequence 226 3e-56
9dbj|AK061276.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 1e-55
10gb|BT017481.1| Zea mays clone EL01N0409H01.c mRNA sequence 155 1e-34
11gb|AF118149.1|AF118149 Secale cereale ribosomal protein S7 mRNA,... 149 6e-33
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 135 9e-29
13gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome... 135 9e-29
14gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare sta... 135 9e-29
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 135 9e-29
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 129 6e-27
17dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic D... 129 6e-27
18dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic D... 129 6e-27
19gb|AF529175.1| Oryza sativa (japonica cultivar-group) ribosomal ... 121 1e-24
20dbj|AK104191.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 1e-24
21dbj|AK061627.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 1e-24
22dbj|AK103081.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 3e-22
23ref|XM_465276.1| Oryza sativa (japonica cultivar-group), mRNA 107 2e-20
24gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome... 84 3e-13
25gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome... 84 3e-13
26dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 84 3e-13
27dbj|AP004915.1| Lotus japonicus genomic DNA, chromosome 4, clone... 66 7e-08
28gb|DQ228355.1| Solanum tuberosum clone 153A08 ribosomal protein ... 58 2e-05
29gb|DQ200382.1| Solanum tuberosum clone 063A09 unknown mRNA 58 2e-05
30gb|DQ191636.1| Solanum tuberosum 40S ribosomal protein S7-like p... 58 2e-05
31gb|DQ241830.1| Solanum tuberosum clone 174B09 40S ribosomal prot... 58 2e-05
32gb|DQ377970.1| Populus x canadensis putative 40S ribosomal prote... 54 3e-04
33gb|AF144752.1|AF144752 Brassica oleracea 40S ribosomal protein S... 50 0.004
34emb|CR940311.11| M.truncatula DNA sequence from clone MTH2-17E17... 42 1.0
35gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 40 4.0
36gb|AC079384.26| Homo sapiens 12 BAC RP11-148B3 (Roswell Park Can... 40 4.0
37gb|AF056316.1|AF056316 Avicennia marina 40S ribosome protein S7 ... 40 4.0
38gb|AF098519.1|AF098519 Avicennia marina unknown mRNA 40 4.0 
>emb|AJ315794.1|HVU315794 Hordeum vulgare mRNA for Ribosomal protein S7 (rps7 gene)
          Length = 852

 Score =  569 bits (287), Expect = e-159
 Identities = 300/306 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   caactaactgaagcatnaaccaaaacatttggatacgaagatatgaaatggagacattca 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 caactaactgaagcatcaaccaaaacatttggatacgaagatatgaaatggagacattca 655

                                                                       
Query: 61  aggcattggtcttcatgcggttgcggccacagggtactcaaagacaacgtctttcccgca 120
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 654 aggcattggtcttcatgcggtttcggccacagggtactcaaagacaacgtctttcccgca 595

                                                                       
Query: 121 aagcctgcggtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 aagcctgcggtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctt 535

                                                                       
Query: 181 tgggtccaagtagatcttgatgaccttggcaccatccaaacggtacctgacgcgcttccc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tgggtccaagtagatcttgatgaccttggcaccatccaaacggtacctgacgcgcttccc 475

                                                                       
Query: 241 cacaatctcagctgggtacacaacatcctncaagataccatnatgaacagntgncagggt 300
           ||||||||||||||||||||||||||||| ||||||||||| |||||||| || ||||||
Sbjct: 474 cacaatctcagctgggtacacaacatcctccaagataccatcatgaacagctgtcagggt 415

                 
Query: 301 tctggt 306
           ||||||
Sbjct: 414 tctggt 409
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>gb|AY846832.1| Triticum aestivum ribosomal protein S7 mRNA, complete cds
          Length = 600

 Score =  375 bits (189), Expect = e-101
 Identities = 224/237 (94%)
 Strand = Plus / Minus

                                                                       
Query: 70  tcttcatgcggttgcggccacagggtactcaaagacaacgtctttcccgcaaagcctgcg 129
           |||||| |||||| | | |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 599 tcttcaggcggtttcagtcacagggtactcaaagacaacgtctttcccacaaagcctgcg 540

                                                                       
Query: 130 gtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaa 189
           |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 539 gtagactgcagagaaggtctccagcttgtactcagtgttgttgcgctccttcgggtccaa 480

                                                                       
Query: 190 gtagatcttgatgaccttggcaccatccaaacggtacctgacgcgcttccccacaatctc 249
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 479 gtagatcttgatgaccttggcaccatccaaacggtacctgacacgcttccccacaatctc 420

                                                                    
Query: 250 agctgggtacacaacatcctncaagataccatnatgaacagntgncagggttctggt 306
           |||||||||||||||||||| ||||||||||| |||||||| || |||||| |||||
Sbjct: 419 agctgggtacacaacatcctccaagataccatcatgaacagctgtcagggtcctggt 363
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>gb|AF542971.1| Triticum aestivum ribosomal protein S7 mRNA, partial cds
          Length = 392

 Score =  343 bits (173), Expect = 2e-91
 Identities = 213/225 (94%), Gaps = 1/225 (0%)
 Strand = Plus / Minus

                                                                       
Query: 18  aaccaaaacatttggatacgaa-gatatgaaatggagacattcaaggcattggtcttcat 76
           |||||||||||||||||  ||| ||||||||||||||||||||||||||| | |||||| 
Sbjct: 227 aaccaaaacatttggatcagaaagatatgaaatggagacattcaaggcatggatcttcag 168

                                                                       
Query: 77  gcggttgcggccacagggtactcaaagacaacgtctttcccgcaaagcctgcggtagact 136
           |||||| | | |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 167 gcggtttcagtcacagggtactcaaagacaacgtctttcccacaaagcctgcggtagact 108

                                                                       
Query: 137 gcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaagtagatc 196
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaagtagatc 48

                                                        
Query: 197 ttgatgaccttggcaccatccaaacggtacctgacgcgcttcccc 241
           ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 47  ttgatgaccttggcaccatccaaacggtatctgacacgcttcccc 3
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>gb|AY290724.1| Triticum aestivum ribosomal protein S7-like mRNA, partial sequence
          Length = 393

 Score =  343 bits (173), Expect = 2e-91
 Identities = 213/225 (94%), Gaps = 1/225 (0%)
 Strand = Plus / Minus

                                                                       
Query: 18  aaccaaaacatttggatacgaa-gatatgaaatggagacattcaaggcattggtcttcat 76
           |||||||||||||||||  ||| ||||||||||||||||||||||||||| | |||||| 
Sbjct: 228 aaccaaaacatttggatcagaaagatatgaaatggagacattcaaggcatggatcttcag 169

                                                                       
Query: 77  gcggttgcggccacagggtactcaaagacaacgtctttcccgcaaagcctgcggtagact 136
           |||||| | | |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 168 gcggtttcagtcacagggtactcaaagacaacgtctttcccacaaagcctgcggtagact 109

                                                                       
Query: 137 gcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaagtagatc 196
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 gcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaagtagatc 49

                                                        
Query: 197 ttgatgaccttggcaccatccaaacggtacctgacgcgcttcccc 241
           ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 48  ttgatgaccttggcaccatccaaacggtatctgacacgcttcccc 4
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>dbj|AK122143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136J20, full
           insert sequence
          Length = 966

 Score =  250 bits (126), Expect = 2e-63
 Identities = 181/200 (90%)
 Strand = Plus / Minus

                                                                       
Query: 91  agggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctc 150
           ||||||||||||| |||| |||||||| ||||||||||||||||| || |||||||||||
Sbjct: 633 agggtactcaaaggcaacatctttcccacaaagcctgcggtagaccgcggagaaggtctc 574

                                                                       
Query: 151 cagcttgtattcagtgttgttgcgctcctttgggtccaagtagatcttgatgaccttggc 210
            ||||||||||| || |||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 573 gagcttgtattcggtattgttgcgctcctttgggtccaagaaaatcttgatgaccttggc 514

                                                                       
Query: 211 accatccaaacggtacctgacgcgcttccccacaatctcagctgggtacacaacatcctn 270
           |||||||| |||||| |||| |||||| || ||||||||||||||||| || ||||||| 
Sbjct: 513 accatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctc 454

                               
Query: 271 caagataccatnatgaacag 290
           ||||||||||| ||||||||
Sbjct: 453 caagataccatcatgaacag 434
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>dbj|AK059192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H09, full
           insert sequence
          Length = 830

 Score =  250 bits (126), Expect = 2e-63
 Identities = 181/200 (90%)
 Strand = Plus / Minus

                                                                       
Query: 91  agggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctc 150
           ||||||||||||| |||| |||||||| ||||||||||||||||| || |||||||||||
Sbjct: 632 agggtactcaaaggcaacatctttcccacaaagcctgcggtagaccgcggagaaggtctc 573

                                                                       
Query: 151 cagcttgtattcagtgttgttgcgctcctttgggtccaagtagatcttgatgaccttggc 210
            ||||||||||| || |||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 572 gagcttgtattcggtattgttgcgctcctttgggtccaagaaaatcttgatgaccttggc 513

                                                                       
Query: 211 accatccaaacggtacctgacgcgcttccccacaatctcagctgggtacacaacatcctn 270
           |||||||| |||||| |||| |||||| || ||||||||||||||||| || ||||||| 
Sbjct: 512 accatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctc 453

                               
Query: 271 caagataccatnatgaacag 290
           ||||||||||| ||||||||
Sbjct: 452 caagataccatcatgaacag 433
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>gb|BT016582.1| Zea mays clone Contig415 mRNA sequence
          Length = 907

 Score =  226 bits (114), Expect = 3e-56
 Identities = 178/200 (89%)
 Strand = Plus / Minus

                                                                       
Query: 91  agggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctc 150
           ||||||||||||||| || |||||||| || |||||||||||||| |||| | |||||||
Sbjct: 666 agggtactcaaagaccacatctttcccacacagcctgcggtagaccgcagtgcaggtctc 607

                                                                       
Query: 151 cagcttgtattcagtgttgttgcgctcctttgggtccaagtagatcttgatgaccttggc 210
           ||||||||||||||||||||| | |||||||||||||||| | |||||||| | ||||| 
Sbjct: 606 cagcttgtattcagtgttgttcctctcctttgggtccaagaaaatcttgataatcttgga 547

                                                                       
Query: 211 accatccaaacggtacctgacgcgcttccccacaatctcagctgggtacacaacatcctn 270
           |||||||| |||||| ||||| |||||||||||||||||||||||||| |||||||||| 
Sbjct: 546 accatccagacggtatctgacacgcttccccacaatctcagctgggtagacaacatcctc 487

                               
Query: 271 caagataccatnatgaacag 290
           |||||| ||||  |||||||
Sbjct: 486 caagatgccatcgtgaacag 467
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>gb|AY103554.1| Zea mays PCO154340 mRNA sequence
          Length = 1075

 Score =  226 bits (114), Expect = 3e-56
 Identities = 178/200 (89%)
 Strand = Plus / Minus

                                                                       
Query: 91  agggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctc 150
           ||||||||||||||| || |||||||| || |||||||||||||| |||| | |||||||
Sbjct: 705 agggtactcaaagaccacatctttcccacacagcctgcggtagaccgcagtgcaggtctc 646

                                                                       
Query: 151 cagcttgtattcagtgttgttgcgctcctttgggtccaagtagatcttgatgaccttggc 210
           ||||||||||||||||||||| | |||||||||||||||| | |||||||| | ||||| 
Sbjct: 645 cagcttgtattcagtgttgttcctctcctttgggtccaagaaaatcttgataatcttgga 586

                                                                       
Query: 211 accatccaaacggtacctgacgcgcttccccacaatctcagctgggtacacaacatcctn 270
           |||||||| |||||| ||||| |||||||||||||||||||||||||| |||||||||| 
Sbjct: 585 accatccagacggtatctgacacgcttccccacaatctcagctgggtagacaacatcctc 526

                               
Query: 271 caagataccatnatgaacag 290
           |||||| ||||  |||||||
Sbjct: 525 caagatgccatcgtgaacag 506
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>dbj|AK061276.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E11, full
           insert sequence
          Length = 811

 Score =  224 bits (113), Expect = 1e-55
 Identities = 169/188 (89%)
 Strand = Plus / Minus

                                                                       
Query: 91  agggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctc 150
           ||||||||| ||| |||| |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 555 agggtactcgaaggcaacatctttcccacaaagcctgcggtagactgcggagaaggtctc 496

                                                                       
Query: 151 cagcttgtattcagtgttgttgcgctcctttgggtccaagtagatcttgatgaccttggc 210
            ||||||||||| || |||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 495 aagcttgtattcggtattgttgcgctcctttgggtccaagaaaatcttgatgaccttggc 436

                                                                       
Query: 211 accatccaaacggtacctgacgcgcttccccacaatctcagctgggtacacaacatcctn 270
           |||||||| |||||| |||| |||||| || ||||||||||||||||| || ||||| | 
Sbjct: 435 accatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcttc 376

                   
Query: 271 caagatac 278
           ||||||||
Sbjct: 375 caagatac 368
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>gb|BT017481.1| Zea mays clone EL01N0409H01.c mRNA sequence
          Length = 840

 Score =  155 bits (78), Expect = 1e-34
 Identities = 169/200 (84%)
 Strand = Plus / Minus

                                                                       
Query: 91  agggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctc 150
           ||||||||||||||| || |||||||| || |||||||||||||| |||  | ||| |||
Sbjct: 629 agggtactcaaagaccacatctttcccacacagcctgcggtagaccgcaatgcagggctc 570

                                                                       
Query: 151 cagcttgtattcagtgttgttgcgctcctttgggtccaagtagatcttgatgaccttggc 210
           |||||||||||||| |||||| | |||||||||||||||| | |||||||| | ||||| 
Sbjct: 569 cagcttgtattcagagttgttcctctcctttgggtccaagaaaatcttgataatcttgga 510

                                                                       
Query: 211 accatccaaacggtacctgacgcgcttccccacaatctcagctgggtacacaacatcctn 270
            ||||||| ||||||  ||||  |||||||| ||||||||| |||||| |||||||||| 
Sbjct: 509 cccatccacacggtatgtgacatgcttcccctcaatctcagttgggtagacaacatcctc 450

                               
Query: 271 caagataccatnatgaacag 290
           ||| || ||||  |||||||
Sbjct: 449 caaaatgccatcgtgaacag 430
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>gb|AF118149.1|AF118149 Secale cereale ribosomal protein S7 mRNA, complete cds
          Length = 819

 Score =  149 bits (75), Expect = 6e-33
 Identities = 154/181 (85%)
 Strand = Plus / Minus

                                                                       
Query: 110 tctttcccgcaaagcctgcggtagactgcagagaaggtctccagcttgtattcagtgttg 169
           ||||| || |||||||||||||| ||||||| |||||| |||| |||||| || ||||||
Sbjct: 577 tctttgccacaaagcctgcggtacactgcagtgaaggtatccaacttgtactctgtgttg 518

                                                                       
Query: 170 ttgcgctcctttgggtccaagtagatcttgatgaccttggcaccatccaaacggtacctg 229
           ||||| ||| ||||||||||| ||||||| |||| ||| |  ||||| | ||| || |||
Sbjct: 517 ttgcgttccattgggtccaagaagatcttaatgatcttcgagccatctagacgatatctg 458

                                                                       
Query: 230 acgcgcttccccacaatctcagctgggtacacaacatcctncaagataccatnatgaaca 289
           || || |||||||||||||||||||||||||||||||||| ||| |  |||| |||||||
Sbjct: 457 acacgtttccccacaatctcagctgggtacacaacatcctccaaaaggccatcatgaaca 398

            
Query: 290 g 290
           |
Sbjct: 397 g 397
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  135 bits (68), Expect = 9e-29
 Identities = 92/100 (92%)
 Strand = Plus / Minus

                                                                            
Query: 91       agggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctc 150
                ||||||||| ||| |||| |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 10371737 agggtactcgaaggcaacatctttcccacaaagcctgcggtagactgcggagaaggtctc 10371678

                                                        
Query: 151      cagcttgtattcagtgttgttgcgctcctttgggtccaag 190
                 ||||||||||| || ||||||||||||||||||||||||
Sbjct: 10371677 aagcttgtattcggtattgttgcgctcctttgggtccaag 10371638



 Score =  135 bits (68), Expect = 9e-29
 Identities = 92/100 (92%)
 Strand = Plus / Minus

                                                                            
Query: 91       agggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctc 150
                ||||||||||||| |||| |||||||| ||||||||||||||||| || |||||||||||
Sbjct: 10367481 agggtactcaaaggcaacatctttcccacaaagcctgcggtagaccgcggagaaggtctc 10367422

                                                        
Query: 151      cagcttgtattcagtgttgttgcgctcctttgggtccaag 190
                 ||||||||||| || ||||||||||||||||||||||||
Sbjct: 10367421 gagcttgtattcggtattgttgcgctcctttgggtccaag 10367382



 Score =  121 bits (61), Expect = 1e-24
 Identities = 86/95 (90%)
 Strand = Plus / Minus

                                                                            
Query: 196      cttgatgaccttggcaccatccaaacggtacctgacgcgcttccccacaatctcagctgg 255
                ||||||||||||||||||||||| |||||| |||| |||||| || ||||||||||||||
Sbjct: 10367128 cttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatctcagctgg 10367069

                                                   
Query: 256      gtacacaacatcctncaagataccatnatgaacag 290
                ||| || ||||||| ||||||||||| ||||||||
Sbjct: 10367068 gtagactacatcctccaagataccatcatgaacag 10367034



 Score =  113 bits (57), Expect = 3e-22
 Identities = 85/95 (89%)
 Strand = Plus / Minus

                                                                            
Query: 196      cttgatgaccttggcaccatccaaacggtacctgacgcgcttccccacaatctcagctgg 255
                ||||||||||||||||||||||| |||||| |||| |||||| || ||||||||||||||
Sbjct: 10371383 cttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatctcagctgg 10371324

                                                   
Query: 256      gtacacaacatcctncaagataccatnatgaacag 290
                ||| || ||||||| |||||||| || ||||||||
Sbjct: 10371323 gtagactacatcctccaagatacaatcatgaacag 10371289
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>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0039F10, complete sequence
          Length = 139714

 Score =  135 bits (68), Expect = 9e-29
 Identities = 92/100 (92%)
 Strand = Plus / Minus

                                                                         
Query: 91    agggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctc 150
             ||||||||| ||| |||| |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 28290 agggtactcgaaggcaacatctttcccacaaagcctgcggtagactgcggagaaggtctc 28231

                                                     
Query: 151   cagcttgtattcagtgttgttgcgctcctttgggtccaag 190
              ||||||||||| || ||||||||||||||||||||||||
Sbjct: 28230 aagcttgtattcggtattgttgcgctcctttgggtccaag 28191



 Score =  135 bits (68), Expect = 9e-29
 Identities = 92/100 (92%)
 Strand = Plus / Minus

                                                                         
Query: 91    agggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctc 150
             ||||||||||||| |||| |||||||| ||||||||||||||||| || |||||||||||
Sbjct: 24034 agggtactcaaaggcaacatctttcccacaaagcctgcggtagaccgcggagaaggtctc 23975

                                                     
Query: 151   cagcttgtattcagtgttgttgcgctcctttgggtccaag 190
              ||||||||||| || ||||||||||||||||||||||||
Sbjct: 23974 gagcttgtattcggtattgttgcgctcctttgggtccaag 23935



 Score =  121 bits (61), Expect = 1e-24
 Identities = 86/95 (90%)
 Strand = Plus / Minus

                                                                         
Query: 196   cttgatgaccttggcaccatccaaacggtacctgacgcgcttccccacaatctcagctgg 255
             ||||||||||||||||||||||| |||||| |||| |||||| || ||||||||||||||
Sbjct: 23681 cttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatctcagctgg 23622

                                                
Query: 256   gtacacaacatcctncaagataccatnatgaacag 290
             ||| || ||||||| ||||||||||| ||||||||
Sbjct: 23621 gtagactacatcctccaagataccatcatgaacag 23587



 Score =  113 bits (57), Expect = 3e-22
 Identities = 85/95 (89%)
 Strand = Plus / Minus

                                                                         
Query: 196   cttgatgaccttggcaccatccaaacggtacctgacgcgcttccccacaatctcagctgg 255
             ||||||||||||||||||||||| |||||| |||| |||||| || ||||||||||||||
Sbjct: 27936 cttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatctcagctgg 27877

                                                
Query: 256   gtacacaacatcctncaagataccatnatgaacag 290
             ||| || ||||||| |||||||| || ||||||||
Sbjct: 27876 gtagactacatcctccaagatacaatcatgaacag 27842
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>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone
             OSJNBb0036D03, from chromosome 3, complete sequence
          Length = 125800

 Score =  135 bits (68), Expect = 9e-29
 Identities = 92/100 (92%)
 Strand = Plus / Minus

                                                                         
Query: 91    agggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctc 150
             ||||||||| ||| |||| |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 85203 agggtactcgaaggcaacatctttcccacaaagcctgcggtagactgcggagaaggtctc 85144

                                                     
Query: 151   cagcttgtattcagtgttgttgcgctcctttgggtccaag 190
              ||||||||||| || ||||||||||||||||||||||||
Sbjct: 85143 aagcttgtattcggtattgttgcgctcctttgggtccaag 85104



 Score =  135 bits (68), Expect = 9e-29
 Identities = 92/100 (92%)
 Strand = Plus / Minus

                                                                         
Query: 91    agggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctc 150
             ||||||||||||| |||| |||||||| ||||||||||||||||| || |||||||||||
Sbjct: 80947 agggtactcaaaggcaacatctttcccacaaagcctgcggtagaccgcggagaaggtctc 80888

                                                     
Query: 151   cagcttgtattcagtgttgttgcgctcctttgggtccaag 190
              ||||||||||| || ||||||||||||||||||||||||
Sbjct: 80887 gagcttgtattcggtattgttgcgctcctttgggtccaag 80848



 Score =  121 bits (61), Expect = 1e-24
 Identities = 86/95 (90%)
 Strand = Plus / Minus

                                                                         
Query: 196   cttgatgaccttggcaccatccaaacggtacctgacgcgcttccccacaatctcagctgg 255
             ||||||||||||||||||||||| |||||| |||| |||||| || ||||||||||||||
Sbjct: 80594 cttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatctcagctgg 80535

                                                
Query: 256   gtacacaacatcctncaagataccatnatgaacag 290
             ||| || ||||||| ||||||||||| ||||||||
Sbjct: 80534 gtagactacatcctccaagataccatcatgaacag 80500



 Score =  113 bits (57), Expect = 3e-22
 Identities = 85/95 (89%)
 Strand = Plus / Minus

                                                                         
Query: 196   cttgatgaccttggcaccatccaaacggtacctgacgcgcttccccacaatctcagctgg 255
             ||||||||||||||||||||||| |||||| |||| |||||| || ||||||||||||||
Sbjct: 84849 cttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatctcagctgg 84790

                                                
Query: 256   gtacacaacatcctncaagataccatnatgaacag 290
             ||| || ||||||| |||||||| || ||||||||
Sbjct: 84789 gtagactacatcctccaagatacaatcatgaacag 84755
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  135 bits (68), Expect = 9e-29
 Identities = 92/100 (92%)
 Strand = Plus / Minus

                                                                            
Query: 91       agggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctc 150
                ||||||||| ||| |||| |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 10369838 agggtactcgaaggcaacatctttcccacaaagcctgcggtagactgcggagaaggtctc 10369779

                                                        
Query: 151      cagcttgtattcagtgttgttgcgctcctttgggtccaag 190
                 ||||||||||| || ||||||||||||||||||||||||
Sbjct: 10369778 aagcttgtattcggtattgttgcgctcctttgggtccaag 10369739



 Score =  135 bits (68), Expect = 9e-29
 Identities = 92/100 (92%)
 Strand = Plus / Minus

                                                                            
Query: 91       agggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctc 150
                ||||||||||||| |||| |||||||| ||||||||||||||||| || |||||||||||
Sbjct: 10365582 agggtactcaaaggcaacatctttcccacaaagcctgcggtagaccgcggagaaggtctc 10365523

                                                        
Query: 151      cagcttgtattcagtgttgttgcgctcctttgggtccaag 190
                 ||||||||||| || ||||||||||||||||||||||||
Sbjct: 10365522 gagcttgtattcggtattgttgcgctcctttgggtccaag 10365483



 Score =  121 bits (61), Expect = 1e-24
 Identities = 86/95 (90%)
 Strand = Plus / Minus

                                                                            
Query: 196      cttgatgaccttggcaccatccaaacggtacctgacgcgcttccccacaatctcagctgg 255
                ||||||||||||||||||||||| |||||| |||| |||||| || ||||||||||||||
Sbjct: 10365229 cttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatctcagctgg 10365170

                                                   
Query: 256      gtacacaacatcctncaagataccatnatgaacag 290
                ||| || ||||||| ||||||||||| ||||||||
Sbjct: 10365169 gtagactacatcctccaagataccatcatgaacag 10365135



 Score =  113 bits (57), Expect = 3e-22
 Identities = 85/95 (89%)
 Strand = Plus / Minus

                                                                            
Query: 196      cttgatgaccttggcaccatccaaacggtacctgacgcgcttccccacaatctcagctgg 255
                ||||||||||||||||||||||| |||||| |||| |||||| || ||||||||||||||
Sbjct: 10369484 cttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatctcagctgg 10369425

                                                   
Query: 256      gtacacaacatcctncaagataccatnatgaacag 290
                ||| || ||||||| |||||||| || ||||||||
Sbjct: 10369424 gtagactacatcctccaagatacaatcatgaacag 10369390
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  129 bits (65), Expect = 6e-27
 Identities = 95/105 (90%)
 Strand = Plus / Plus

                                                                            
Query: 92       gggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctcc 151
                |||||||||||| |||| |||||||| |||||||| |||||||||||| |||||||||||
Sbjct: 13024240 gggtactcaaaggcaacatctttcccacaaagcctacggtagactgcaaagaaggtctcc 13024299

                                                             
Query: 152      agcttgtattcagtgttgttgcgctcctttgggtccaagtagatc 196
                |||||||||||  | ||||||||||||||||| |||||| |||||
Sbjct: 13024300 agcttgtattcgatattgttgcgctcctttggatccaagaagatc 13024344



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 49/56 (87%), Gaps = 1/56 (1%)
 Strand = Plus / Plus

                                                                        
Query: 235      cttccccacaatctcagctgggtacacaacatcctncaagataccatnatgaacag 290
                |||||| ||||||||||||||| | || ||||||| |||||| |||| ||||||||
Sbjct: 13024658 cttcccaacaatctcagctggg-agactacatcctccaagattccatcatgaacag 13024712
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>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0688H12
          Length = 139279

 Score =  129 bits (65), Expect = 6e-27
 Identities = 95/105 (90%)
 Strand = Plus / Plus

                                                                          
Query: 92     gggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctcc 151
              |||||||||||| |||| |||||||| |||||||| |||||||||||| |||||||||||
Sbjct: 133883 gggtactcaaaggcaacatctttcccacaaagcctacggtagactgcaaagaaggtctcc 133942

                                                           
Query: 152    agcttgtattcagtgttgttgcgctcctttgggtccaagtagatc 196
              |||||||||||  | ||||||||||||||||| |||||| |||||
Sbjct: 133943 agcttgtattcgatattgttgcgctcctttggatccaagaagatc 133987



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 49/56 (87%), Gaps = 1/56 (1%)
 Strand = Plus / Plus

                                                                      
Query: 235    cttccccacaatctcagctgggtacacaacatcctncaagataccatnatgaacag 290
              |||||| ||||||||||||||| | || ||||||| |||||| |||| ||||||||
Sbjct: 134301 cttcccaacaatctcagctggg-agactacatcctccaagattccatcatgaacag 134355
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>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           PAC clone:P0476C12
          Length = 157570

 Score =  129 bits (65), Expect = 6e-27
 Identities = 95/105 (90%)
 Strand = Plus / Plus

                                                                       
Query: 92  gggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctcc 151
           |||||||||||| |||| |||||||| |||||||| |||||||||||| |||||||||||
Sbjct: 817 gggtactcaaaggcaacatctttcccacaaagcctacggtagactgcaaagaaggtctcc 876

                                                        
Query: 152 agcttgtattcagtgttgttgcgctcctttgggtccaagtagatc 196
           |||||||||||  | ||||||||||||||||| |||||| |||||
Sbjct: 877 agcttgtattcgatattgttgcgctcctttggatccaagaagatc 921



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 49/56 (87%), Gaps = 1/56 (1%)
 Strand = Plus / Plus

                                                                    
Query: 235  cttccccacaatctcagctgggtacacaacatcctncaagataccatnatgaacag 290
            |||||| ||||||||||||||| | || ||||||| |||||| |||| ||||||||
Sbjct: 1235 cttcccaacaatctcagctggg-agactacatcctccaagattccatcatgaacag 1289
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>gb|AF529175.1| Oryza sativa (japonica cultivar-group) ribosomal protein S7 (RPS7)
           mRNA, complete cds
          Length = 919

 Score =  121 bits (61), Expect = 1e-24
 Identities = 119/139 (85%)
 Strand = Plus / Minus

                                                                       
Query: 152 agcttgtattcagtgttgttgcgctcctttgggtccaagtagatcttgatgaccttggca 211
           |||||||| || ||||||||||||||||||||||||| | ||||||| ||||  ||   |
Sbjct: 602 agcttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttcta 543

                                                                       
Query: 212 ccatccaaacggtacctgacgcgcttccccacaatctcagctgggtacacaacatcctnc 271
           ||||||||  |||| ||||| |||||||| |||||||| ||||| ||||||||||||| |
Sbjct: 542 ccatccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctcc 483

                              
Query: 272 aagataccatnatgaacag 290
           ||||| |||| ||||||||
Sbjct: 482 aagatgccatcatgaacag 464
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>dbj|AK104191.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C09, full
           insert sequence
          Length = 910

 Score =  121 bits (61), Expect = 1e-24
 Identities = 119/139 (85%)
 Strand = Plus / Minus

                                                                       
Query: 152 agcttgtattcagtgttgttgcgctcctttgggtccaagtagatcttgatgaccttggca 211
           |||||||| || ||||||||||||||||||||||||| | ||||||| ||||  ||   |
Sbjct: 613 agcttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttcta 554

                                                                       
Query: 212 ccatccaaacggtacctgacgcgcttccccacaatctcagctgggtacacaacatcctnc 271
           ||||||||  |||| ||||| |||||||| |||||||| ||||| ||||||||||||| |
Sbjct: 553 ccatccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctcc 494

                              
Query: 272 aagataccatnatgaacag 290
           ||||| |||| ||||||||
Sbjct: 493 aagatgccatcatgaacag 475
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>dbj|AK061627.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B02, full
           insert sequence
          Length = 910

 Score =  121 bits (61), Expect = 1e-24
 Identities = 119/139 (85%)
 Strand = Plus / Minus

                                                                       
Query: 152 agcttgtattcagtgttgttgcgctcctttgggtccaagtagatcttgatgaccttggca 211
           |||||||| || ||||||||||||||||||||||||| | ||||||| ||||  ||   |
Sbjct: 613 agcttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttcta 554

                                                                       
Query: 212 ccatccaaacggtacctgacgcgcttccccacaatctcagctgggtacacaacatcctnc 271
           ||||||||  |||| ||||| |||||||| |||||||| ||||| ||||||||||||| |
Sbjct: 553 ccatccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctcc 494

                              
Query: 272 aagataccatnatgaacag 290
           ||||| |||| ||||||||
Sbjct: 493 aagatgccatcatgaacag 475
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>dbj|AK103081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118F01, full
           insert sequence
          Length = 903

 Score =  113 bits (57), Expect = 3e-22
 Identities = 118/139 (84%)
 Strand = Plus / Minus

                                                                       
Query: 152 agcttgtattcagtgttgttgcgctcctttgggtccaagtagatcttgatgaccttggca 211
           |||||||| || ||||||||||||||||||||||||| | ||||||| ||||  ||   |
Sbjct: 613 agcttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttcta 554

                                                                       
Query: 212 ccatccaaacggtacctgacgcgcttccccacaatctcagctgggtacacaacatcctnc 271
           ||| ||||  |||| ||||| |||||||| |||||||| ||||| ||||||||||||| |
Sbjct: 553 ccacccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctcc 494

                              
Query: 272 aagataccatnatgaacag 290
           ||||| |||| ||||||||
Sbjct: 493 aagatgccatcatgaacag 475
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>ref|XM_465276.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 339

 Score =  107 bits (54), Expect = 2e-20
 Identities = 78/86 (90%)
 Strand = Plus / Minus

                                                                       
Query: 92  gggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctcc 151
           |||||||||||| |||| |||||||| |||||||| |||||||||||| |||||||||||
Sbjct: 320 gggtactcaaaggcaacatctttcccacaaagcctacggtagactgcaaagaaggtctcc 261

                                     
Query: 152 agcttgtattcagtgttgttgcgctc 177
           |||||||||||  | |||||||||||
Sbjct: 260 agcttgtattcgatattgttgcgctc 235
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>gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1164G01,
             complete sequence
          Length = 151938

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                         
Query: 211   accatccaaacggtacctgacgcgcttccccacaatctcagctgggtacacaacatcctn 270
             |||||||||  |||| ||||| |||||||| |||||||| ||||| ||||||||||||| 
Sbjct: 15608 accatccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctc 15667

                                 
Query: 271   caagataccatnatgaacag 290
             |||||| |||| ||||||||
Sbjct: 15668 caagatgccatcatgaacag 15687



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 152   agcttgtattcagtgttgttgcgctcctttgggtccaagtagatct 197
             |||||||| || ||||||||||||||||||||||||| | ||||||
Sbjct: 14993 agcttgtactcggtgttgttgcgctcctttgggtccaggaagatct 15038
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>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05,
              complete sequence
          Length = 143400

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                          
Query: 211    accatccaaacggtacctgacgcgcttccccacaatctcagctgggtacacaacatcctn 270
              |||||||||  |||| ||||| |||||||| |||||||| ||||| ||||||||||||| 
Sbjct: 119421 accatccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctc 119480

                                  
Query: 271    caagataccatnatgaacag 290
              |||||| |||| ||||||||
Sbjct: 119481 caagatgccatcatgaacag 119500



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                            
Query: 152    agcttgtattcagtgttgttgcgctcctttgggtccaagtagatct 197
              |||||||| || ||||||||||||||||||||||||| | ||||||
Sbjct: 118806 agcttgtactcggtgttgttgcgctcctttgggtccaggaagatct 118851
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                            
Query: 211      accatccaaacggtacctgacgcgcttccccacaatctcagctgggtacacaacatcctn 270
                |||||||||  |||| ||||| |||||||| |||||||| ||||| ||||||||||||| 
Sbjct: 16168251 accatccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctc 16168310

                                    
Query: 271      caagataccatnatgaacag 290
                |||||| |||| ||||||||
Sbjct: 16168311 caagatgccatcatgaacag 16168330



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 152      agcttgtattcagtgttgttgcgctcctttgggtccaagtagatct 197
                |||||||| || ||||||||||||||||||||||||| | ||||||
Sbjct: 16167636 agcttgtactcggtgttgttgcgctcctttgggtccaggaagatct 16167681
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>dbj|AP004915.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16G15, TM0073,
             complete sequence
          Length = 90077

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                          
Query: 146   gtctccagcttgtattcagtgttgttgcgctcctttgggtccaag 190
             |||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 14987 gtctccagcttgtactcagtgttgtttcgttcctttgggtccaag 14943
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>gb|DQ228355.1| Solanum tuberosum clone 153A08 ribosomal protein S7-like protein
           mRNA, complete cds
          Length = 881

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                       
Query: 92  gggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctcc 151
           ||||||||||| ||||| ||||| ||  ||||| | | ||| ||||| || |||||||||
Sbjct: 653 gggtactcaaacacaacatctttgcctgaaagctttctgtaaactgctgaaaaggtctcc 594

                                                    
Query: 152 agcttgtattcagtgttgttgcgctcctttgggtccaagta 192
           | ||| || || |||||||| || ||||| |||||||||||
Sbjct: 593 aacttatactctgtgttgtttcgttccttggggtccaagta 553
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>gb|DQ200382.1| Solanum tuberosum clone 063A09 unknown mRNA
          Length = 817

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                       
Query: 92  gggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctcc 151
           ||||||||||| ||||| ||||| ||  ||||| | | ||| ||||| || |||||||||
Sbjct: 640 gggtactcaaacacaacatctttgcctgaaagctttctgtaaactgctgaaaaggtctcc 581

                                                    
Query: 152 agcttgtattcagtgttgttgcgctcctttgggtccaagta 192
           | ||| || || |||||||| || ||||| |||||||||||
Sbjct: 580 aacttatactctgtgttgtttcgttccttggggtccaagta 540
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>gb|DQ191636.1| Solanum tuberosum 40S ribosomal protein S7-like protein mRNA,
           complete cds
          Length = 893

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                       
Query: 92  gggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctcc 151
           ||||||||||| ||||| ||||| ||  ||||| | | ||| ||||| || |||||||||
Sbjct: 636 gggtactcaaacacaacatctttgcctgaaagctttctgtaaactgctgaaaaggtctcc 577

                                                    
Query: 152 agcttgtattcagtgttgttgcgctcctttgggtccaagta 192
           | ||| || || |||||||| || ||||| |||||||||||
Sbjct: 576 aacttatactctgtgttgtttcgttccttggggtccaagta 536
to top
>gb|DQ241830.1| Solanum tuberosum clone 174B09 40S ribosomal protein S7-like
           protein-like mRNA, complete cds
          Length = 894

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                       
Query: 92  gggtactcaaagacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctcc 151
           ||||||||||| ||||| ||||| ||  ||||| | | ||| ||||| || |||||||||
Sbjct: 643 gggtactcaaacacaacatctttgcctgaaagctttctgtaaactgctgaaaaggtctcc 584

                                                    
Query: 152 agcttgtattcagtgttgttgcgctcctttgggtccaagta 192
           | ||| || || |||||||| || ||||| |||||||||||
Sbjct: 583 aacttatactctgtgttgtttcgttccttggggtccaagta 543
to top
>gb|DQ377970.1| Populus x canadensis putative 40S ribosomal protein S7 mRNA,
           partial cds
          Length = 546

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 161 tcagtgttgttgcgctcctttgggtccaagtagatcttg 199
           |||||||||||||||||||| || |||||| ||||||||
Sbjct: 544 tcagtgttgttgcgctccttgggatccaagaagatcttg 506
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>gb|AF144752.1|AF144752 Brassica oleracea 40S ribosomal protein S7 homolog mRNA, complete
           cds
          Length = 798

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 91/113 (80%)
 Strand = Plus / Minus

                                                                       
Query: 146 gtctccagcttgtattcagtgttgttgcgctcctttgggtccaagtagatcttgatgacc 205
           ||||| |||||||| ||||||||||| | |||||| || ||||| || | ||| |||| |
Sbjct: 587 gtctcaagcttgtactcagtgttgttcctctccttaggctccaaatacaccttcatgatc 528

                                                                
Query: 206 ttggcaccatccaaacggtacctgacgcgcttccccacaatctcagctgggta 258
           ||||  ||||| | |||||| |||   ||||| || ||||||||||| |||||
Sbjct: 527 ttggtgccatcaacacggtatctggtacgctttccaacaatctcagcagggta 475
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>emb|CR940311.11| M.truncatula DNA sequence from clone MTH2-17E17 on chromosome 3,
             complete sequence
          Length = 122868

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                  
Query: 137   gcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaa 189
             ||||| || |||||||  |||||||| || ||||| | |||||||||||||||
Sbjct: 46348 gcagaaaacgtctccaatttgtattcggtattgtttctctcctttgggtccaa 46296
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>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    cttccccacaatctcagctg 254
              ||||||||||||||||||||
Sbjct: 313603 cttccccacaatctcagctg 313622
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>gb|AC079384.26| Homo sapiens 12 BAC RP11-148B3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 180555

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 151   cagcttgtattcagtgttgttgcg 174
             ||||||||||||||||||| ||||
Sbjct: 85208 cagcttgtattcagtgttgctgcg 85185
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>gb|AF056316.1|AF056316 Avicennia marina 40S ribosome protein S7 mRNA, complete cds
          Length = 833

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 98  tcaaagacaacgtctttccc 117
           ||||||||||||||||||||
Sbjct: 619 tcaaagacaacgtctttccc 600
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>gb|AF098519.1|AF098519 Avicennia marina unknown mRNA
          Length = 833

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 98  tcaaagacaacgtctttccc 117
           ||||||||||||||||||||
Sbjct: 619 tcaaagacaacgtctttccc 600


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,002,846
Number of Sequences: 3902068
Number of extensions: 2002846
Number of successful extensions: 32650
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32537
Number of HSP's gapped (non-prelim): 107
length of query: 306
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 284
effective length of database: 17,147,199,772
effective search space: 4869804735248
effective search space used: 4869804735248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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