ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd23p02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 484 bits (244), Expect = e-133 Identities = 284/302 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43141 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 43200 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 43201 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 43260 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 43261 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 43320 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43321 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 43380 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 43381 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 43440 Query: 301 ct 302 || Sbjct: 43441 ct 43442 Score = 484 bits (244), Expect = e-133 Identities = 284/302 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21976 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 21917 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 21916 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 21857 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 21856 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 21797 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21796 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 21737 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 21736 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 21677 Query: 301 ct 302 || Sbjct: 21676 ct 21675
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 484 bits (244), Expect = e-133 Identities = 284/302 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121981 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 122040 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122041 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 122100 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 122101 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 122160 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122161 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 122220 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 122221 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 122280 Query: 301 ct 302 || Sbjct: 122281 ct 122282 Score = 484 bits (244), Expect = e-133 Identities = 284/302 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100856 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 100797 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 100796 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 100737 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 100736 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 100677 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100676 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 100617 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 100616 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 100557 Query: 301 ct 302 || Sbjct: 100556 ct 100555
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 484 bits (244), Expect = e-133 Identities = 284/302 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122698 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 122757 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122758 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 122817 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 122818 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 122877 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122878 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 122937 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 122938 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 122997 Query: 301 ct 302 || Sbjct: 122998 ct 122999 Score = 484 bits (244), Expect = e-133 Identities = 284/302 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101533 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 101474 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 101473 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 101414 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 101413 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 101354 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101353 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 101294 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 101293 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 101234 Query: 301 ct 302 || Sbjct: 101233 ct 101232
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 484 bits (244), Expect = e-133 Identities = 284/302 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118317 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 118376 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 118377 cgttcgagcttttcctgggagtatggcatcagttacatacttcagcgccgtagcgcctgg 118436 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 118437 tatgagcctcgtggagaagcaatcgctagtccacggggctcatacttcagcgctgcagcg 118496 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118497 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 118556 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 118557 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 118616 Query: 301 ct 302 || Sbjct: 118617 ct 118618 Score = 484 bits (244), Expect = e-133 Identities = 284/302 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96577 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 96518 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 96517 cgttcgagcttttcctgggagtatggcatcagttacatacttcagcgccgtagcgcctgg 96458 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 96457 tatgagcctcgtggagaagcaatcgctagtccacggggctcatacttcagcgctgcagcg 96398 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96397 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 96338 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 96337 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 96278 Query: 301 ct 302 || Sbjct: 96277 ct 96276
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 117098 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 117157 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 117158 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 117217 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 117218 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 117277 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117278 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 117337 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 117338 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 117397 Query: 301 ct 302 || Sbjct: 117398 ct 117399
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 118182 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 118241 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 118242 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 118301 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 118302 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 118361 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118362 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 118421 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 118422 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 118481 Query: 301 ct 302 || Sbjct: 118482 ct 118483 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 96974 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 96915 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 96914 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 96855 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 96854 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 96795 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96794 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 96735 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 96734 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 96675 Query: 301 ct 302 || Sbjct: 96674 ct 96673
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 118182 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 118241 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 118242 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 118301 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 118302 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 118361 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118362 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 118421 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 118422 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 118481 Query: 301 ct 302 || Sbjct: 118482 ct 118483 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 96974 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 96915 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 96914 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 96855 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 96854 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 96795 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96794 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 96735 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 96734 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 96675 Query: 301 ct 302 || Sbjct: 96674 ct 96673
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 118131 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 118190 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 118191 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 118250 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 118251 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 118310 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118311 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 118370 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 118371 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 118430 Query: 301 ct 302 || Sbjct: 118431 ct 118432 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 96919 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 96860 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 96859 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 96800 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 96799 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 96740 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96739 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 96680 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 96679 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 96620 Query: 301 ct 302 || Sbjct: 96619 ct 96618
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 31509552 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 31509493 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 31509492 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 31509433 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 31509432 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 31509373 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509372 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 31509313 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 31509312 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 31509253 Query: 301 ct 302 || Sbjct: 31509252 ct 31509251 Score = 460 bits (232), Expect = e-126 Identities = 281/302 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 27319998 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 27320057 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 27320058 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 27320117 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || || | Sbjct: 27320118 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagtg 27320177 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 27320178 cttggtactcggacctcggctcgaggcattttttctaccccttcttaccctgaaaaagca 27320237 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 27320238 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 27320297 Query: 301 ct 302 || Sbjct: 27320298 ct 27320299
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 83044 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 83103 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 83104 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 83163 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 83164 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 83223 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83224 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 83283 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 83284 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 83343 Query: 301 ct 302 || Sbjct: 83344 ct 83345
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 124015 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 123956 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 123955 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 123896 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 123895 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 123836 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123835 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 123776 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 123775 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 123716 Query: 301 ct 302 || Sbjct: 123715 ct 123714 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 15741 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 15682 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 15681 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 15622 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 15621 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 15562 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15561 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 15502 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 15501 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 15442 Query: 301 ct 302 || Sbjct: 15441 ct 15440
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 142549 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 142490 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 142489 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 142430 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 142429 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 142370 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142369 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 142310 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 142309 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 142250 Query: 301 ct 302 || Sbjct: 142249 ct 142248
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95145 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 95086 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95085 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 95026 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 95025 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 94966 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94965 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 94906 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 94905 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 94846 Query: 301 ct 302 || Sbjct: 94845 ct 94844
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 56870 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 56929 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 56930 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 56989 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 56990 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 57049 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57050 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 57109 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 57110 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 57169 Query: 301 ct 302 || Sbjct: 57170 ct 57171
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 29209 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 29150 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 29149 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 29090 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 29089 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 29030 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29029 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 28970 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 28969 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 28910 Query: 301 ct 302 || Sbjct: 28909 ct 28908
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9269901 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 9269842 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9269841 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 9269782 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 9269781 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 9269722 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269721 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 9269662 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 9269661 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 9269602 Query: 301 ct 302 || Sbjct: 9269601 ct 9269600 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9229401 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 9229342 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9229341 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 9229282 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 9229281 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 9229222 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229221 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 9229162 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 9229161 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 9229102 Query: 301 ct 302 || Sbjct: 9229101 ct 9229100 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9165989 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 9165930 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9165929 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 9165870 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 9165869 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 9165810 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165809 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 9165750 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 9165749 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 9165690 Query: 301 ct 302 || Sbjct: 9165689 ct 9165688 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9057815 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 9057756 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9057755 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 9057696 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 9057695 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 9057636 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057635 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 9057576 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 9057575 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 9057516 Query: 301 ct 302 || Sbjct: 9057515 ct 9057514 Score = 119 bits (60), Expect = 6e-24 Identities = 81/89 (91%) Strand = Plus / Minus Query: 101 ttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggct 160 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 25661870 ttcagcgccgtagcgcctggtacaagcctcgtggagaagcaatagctagtccacgaggct 25661811 Query: 161 catacttcagngntgnagcgcttggtact 189 |||||||||| | | ||||||||||||| Sbjct: 25661810 catacttcagcgccgcagcgcttggtact 25661782 Score = 56.0 bits (28), Expect = 8e-05 Identities = 38/43 (88%) Strand = Plus / Minus Query: 260 aacctataaccatctttnggctaacctancctnctncgtncct 302 ||||||||||||||||| |||||||||| ||| || ||| ||| Sbjct: 5792222 aacctataaccatcttttggctaacctagcctcctccgtccct 5792180
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 19939886 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 19939827 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 19939826 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 19939767 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 19939766 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 19939707 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939706 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 19939647 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 19939646 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 19939587 Query: 301 ct 302 || Sbjct: 19939586 ct 19939585 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10388753 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 10388694 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10388693 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 10388634 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 10388633 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 10388574 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388573 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 10388514 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 10388513 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 10388454 Query: 301 ct 302 || Sbjct: 10388453 ct 10388452 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10275545 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 10275604 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10275605 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 10275664 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 10275665 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 10275724 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275725 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 10275784 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 10275785 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 10275844 Query: 301 ct 302 || Sbjct: 10275845 ct 10275846
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9240380 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 9240439 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9240440 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 9240499 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 9240500 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 9240559 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240560 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 9240619 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 9240620 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 9240679 Query: 301 ct 302 || Sbjct: 9240680 ct 9240681 Score = 174 bits (88), Expect = 1e-40 Identities = 206/247 (83%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 17 ccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcct 76 ||||||||||| ||||| |||||| |||| ||||||||||||||| || ||||||||||| Sbjct: 3579636 ccacctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttcct 3579695 Query: 77 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 136 | |||||||||| | ||||||||||| | || || ||||| ||||||||||| Sbjct: 3579696 gaaagtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtggta 3579750 Query: 137 aagcaattgctagtccacggggctcatacttcagngntgnagcgcttggtactnntncct 196 ||||||| ||||||||| |||||||||||||| | || ||||||||||||| ||| Sbjct: 3579751 aagcaatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggacct 3579810 Query: 197 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcc 256 |||| |||||||||||||| |||||||||||||||||||| |||||||||| |||| Sbjct: 3579811 tggcttaaggcattttctcta-cccttcttaccctgaaaaaggagggtcaccttgtgtcc 3579869 Query: 257 ttaaacc 263 ||||||| Sbjct: 3579870 ttaaacc 3579876
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 31600068 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 31600009 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 31600008 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 31599949 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 31599948 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 31599889 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599888 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 31599829 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 31599828 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 31599769 Query: 301 ct 302 || Sbjct: 31599768 ct 31599767 Score = 460 bits (232), Expect = e-126 Identities = 281/302 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 27411321 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 27411380 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 27411381 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 27411440 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || || | Sbjct: 27411441 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagtg 27411500 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 27411501 cttggtactcggacctcggctcgaggcattttttctaccccttcttaccctgaaaaagca 27411560 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 27411561 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 27411620 Query: 301 ct 302 || Sbjct: 27411621 ct 27411622
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 46157 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 46216 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 46217 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 46276 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 46277 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 46336 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46337 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 46396 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 46397 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 46456 Query: 301 ct 302 || Sbjct: 46457 ct 46458
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 51593 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 51652 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 51653 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 51712 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 51713 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 51772 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51773 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 51832 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 51833 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 51892 Query: 301 ct 302 || Sbjct: 51893 ct 51894
>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full insert sequence Length = 1809 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 407 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 348 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 347 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 288 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 287 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 228 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 168 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 167 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 108 Query: 301 ct 302 || Sbjct: 107 ct 106
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 627 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 568 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 567 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 508 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 507 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 448 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 388 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 387 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 328 Query: 301 ct 302 || Sbjct: 327 ct 326
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 823 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 764 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 763 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 704 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 703 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 644 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 643 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 584 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 583 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 524 Query: 301 ct 302 || Sbjct: 523 ct 522
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1548 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 1489 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1488 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 1429 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 1428 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 1369 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1368 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 1309 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 1308 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 1249 Query: 301 ct 302 || Sbjct: 1248 ct 1247
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 692 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 633 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 632 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 573 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 572 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 513 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 453 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 452 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 393 Query: 301 ct 302 || Sbjct: 392 ct 391
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1419 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 1360 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1359 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 1300 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 1299 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 1240 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1239 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 1180 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 1179 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 1120 Query: 301 ct 302 || Sbjct: 1119 ct 1118
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1548 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 1489 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1488 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 1429 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 1428 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 1369 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1368 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 1309 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 1308 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 1249 Query: 301 ct 302 || Sbjct: 1248 ct 1247
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 636 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 577 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 576 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 517 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 516 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 457 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 456 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 397 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 396 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 337 Query: 301 ct 302 || Sbjct: 336 ct 335
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1171 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 1112 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1111 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 1052 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 1051 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 992 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 991 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 932 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 931 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 872 Query: 301 ct 302 || Sbjct: 871 ct 870
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 19951162 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 19951103 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 19951102 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 19951043 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 19951042 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 19950983 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950982 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 19950923 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 19950922 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 19950863 Query: 301 ct 302 || Sbjct: 19950862 ct 19950861 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10394792 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 10394733 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10394732 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 10394673 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 10394672 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 10394613 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394612 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 10394553 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 10394552 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 10394493 Query: 301 ct 302 || Sbjct: 10394492 ct 10394491 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10281584 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 10281643 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10281644 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 10281703 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 10281704 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 10281763 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281764 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 10281823 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 10281824 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 10281883 Query: 301 ct 302 || Sbjct: 10281884 ct 10281885
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 118125 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 118184 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 118185 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 118244 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 118245 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 118304 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118305 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 118364 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 118365 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 118424 Query: 301 ct 302 || Sbjct: 118425 ct 118426 Score = 476 bits (240), Expect = e-131 Identities = 283/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 96914 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 96855 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 96854 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 96795 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 96794 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 96735 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96734 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 96675 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 96674 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 96615 Query: 301 ct 302 || Sbjct: 96614 ct 96613
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 460 bits (232), Expect = e-126 Identities = 281/302 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 20205 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 20264 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 20265 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 20324 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || || | Sbjct: 20325 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagtg 20384 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 20385 cttggtactcggacctcggctcgaggcattttttctaccccttcttaccctgaaaaagca 20444 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 20445 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 20504 Query: 301 ct 302 || Sbjct: 20505 ct 20506
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 460 bits (232), Expect = e-126 Identities = 282/302 (93%), Gaps = 1/302 (0%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 118152 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 118211 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 118212 cgttcgagcttttcctgggagtatggcatgggttacatacttca-cgccgtagcgcctgg 118270 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 118271 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 118330 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118331 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 118390 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 118391 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 118450 Query: 301 ct 302 || Sbjct: 118451 ct 118452 Score = 460 bits (232), Expect = e-126 Identities = 282/302 (93%), Gaps = 1/302 (0%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 96966 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 96907 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 96906 cgttcgagcttttcctgggagtatggcatgggttacatacttca-cgccgtagcgcctgg 96848 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 96847 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 96788 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96787 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 96728 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 96727 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 96668 Query: 301 ct 302 || Sbjct: 96667 ct 96666
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 460 bits (232), Expect = e-126 Identities = 281/302 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5634064 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 5634123 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 5634124 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcaccgtagcgcctgg 5634183 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 |||||||||||| |||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 5634184 tatgagcctcgtcgagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 5634243 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634244 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 5634303 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 5634304 gggtcaccttgcgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 5634363 Query: 301 ct 302 || Sbjct: 5634364 ct 5634365 Score = 133 bits (67), Expect = 4e-28 Identities = 88/97 (90%) Strand = Plus / Plus Query: 153 acggggctcatacttcagngntgnagcgcttggtactnntncctcggctcgaggcatttt 212 |||||||||||||||||| | || || |||||||||| ||||||||||| ||||||| Sbjct: 13417087 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 13417146 Query: 213 ctctaccccttcttaccctgaaaaagcagggtcacct 249 ||||||||||||||||||||||||||||||||||||| Sbjct: 13417147 ctctaccccttcttaccctgaaaaagcagggtcacct 13417183
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 460 bits (232), Expect = e-126 Identities = 281/302 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5634053 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 5634112 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 5634113 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcaccgtagcgcctgg 5634172 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 |||||||||||| |||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 5634173 tatgagcctcgtcgagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 5634232 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634233 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 5634292 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 5634293 gggtcaccttgcgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 5634352 Query: 301 ct 302 || Sbjct: 5634353 ct 5634354 Score = 133 bits (67), Expect = 4e-28 Identities = 88/97 (90%) Strand = Plus / Plus Query: 153 acggggctcatacttcagngntgnagcgcttggtactnntncctcggctcgaggcatttt 212 |||||||||||||||||| | || || |||||||||| ||||||||||| ||||||| Sbjct: 13371361 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 13371420 Query: 213 ctctaccccttcttaccctgaaaaagcagggtcacct 249 ||||||||||||||||||||||||||||||||||||| Sbjct: 13371421 ctctaccccttcttaccctgaaaaagcagggtcacct 13371457
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 460 bits (232), Expect = e-126 Identities = 281/302 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 18821 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 18762 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 18761 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcaccgtagcgcctgg 18702 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 |||||||||||| |||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 18701 tatgagcctcgtcgagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 18642 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18641 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 18582 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 18581 gggtcaccttgcgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 18522 Query: 301 ct 302 || Sbjct: 18521 ct 18520
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 452 bits (228), Expect = e-124 Identities = 281/302 (93%), Gaps = 1/302 (0%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121924 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 121983 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 121984 cgttcgagcttttcctgggagtatggcatgggttacatacttc-gcgccgtagcgcctgg 122042 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| ||||||||||||||||||||||| | | || |||| Sbjct: 122043 tatgagcctcgtggagaagcaatggctagtccacggggctcatactttcgcgctgcagcg 122102 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122103 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 122162 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 122163 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 122222 Query: 301 ct 302 || Sbjct: 122223 ct 122224 Score = 452 bits (228), Expect = e-124 Identities = 281/302 (93%), Gaps = 1/302 (0%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100813 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 100754 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 100753 cgttcgagcttttcctgggagtatggcatgggttacatacttc-gcgccgtagcgcctgg 100695 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| ||||||||||||||||||||||| | | || |||| Sbjct: 100694 tatgagcctcgtggagaagcaatggctagtccacggggctcatactttcgcgctgcagcg 100635 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100634 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 100575 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 100574 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 100515 Query: 301 ct 302 || Sbjct: 100514 ct 100513
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 452 bits (228), Expect = e-124 Identities = 281/302 (93%), Gaps = 1/302 (0%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7166 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 7107 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 7106 cgttcgagcttttcctgggagtatggcatgggttacatacttc-gcgccgtagcgcctgg 7048 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| ||||||||||||||||||||||| | | || |||| Sbjct: 7047 tatgagcctcgtggagaagcaatggctagtccacggggctcatactttcgcgctgcagcg 6988 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6987 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 6928 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 6927 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 6868 Query: 301 ct 302 || Sbjct: 6867 ct 6866
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 452 bits (228), Expect = e-124 Identities = 281/302 (93%), Gaps = 1/302 (0%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1754 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 1695 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 1694 cgttcgagcttttcctgggagtatggcatgggttacatacttc-gcgccgtagcgcctgg 1636 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| ||||||||||||||||||||||| | | || |||| Sbjct: 1635 tatgagcctcgtggagaagcaatggctagtccacggggctcatactttcgcgctgcagcg 1576 Query: 181 cttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1575 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 1516 Query: 241 gggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctncgtnc 300 ||||||||| |||||||||||||||||||||||| |||||||||| ||| || ||| | Sbjct: 1515 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 1456 Query: 301 ct 302 || Sbjct: 1455 ct 1454
>ref|NM_195959.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0075K12.8), mRNA Length = 858 Score = 369 bits (186), Expect = 4e-99 Identities = 216/229 (94%) Strand = Plus / Plus Query: 40 aggtacccttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacata 99 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 630 aggtacccctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacata 689 Query: 100 cttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggc 159 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 690 cttcagcgccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggc 749 Query: 160 tcatacttcagngntgnagcgcttggtactnntncctcggctcgaggcattttctctacc 219 ||||||||||| | || ||||||||||||| |||||||||||||||||||||||||| Sbjct: 750 tcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacc 809 Query: 220 ccttcttaccctgaaaaagcagggtcacctnnngtccttaaacctataa 268 |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 810 ccttcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataa 858
>dbj|AK058625.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-C02, full insert sequence Length = 425 Score = 347 bits (175), Expect = 2e-92 Identities = 202/213 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 213 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 154 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 153 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctgg 94 Query: 121 tatgagcctcgtggagaagcaattgctagtccacggggctcatacttcagngntgnagcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||| Sbjct: 93 tatgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcg 34 Query: 181 cttggtactnntncctcggctcgaggcattttc 213 ||||||||| |||||||||||||||||||| Sbjct: 33 cttggtactcggacctcggctcgaggcattttc 1
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 244 bits (123), Expect = 2e-61 Identities = 135/139 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 814536 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 814477 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 814476 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagtgcctgg 814417 Query: 121 tatgagcctcgtggagaag 139 ||||||||||||||||||| Sbjct: 814416 tatgagcctcgtggagaag 814398 Score = 42.1 bits (21), Expect = 1.2 Identities = 40/46 (86%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 128 ctcgtggagaagcaattgctagt----ccacggggctcatacttca 169 |||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 30471823 ctcgtggagaagcaatggctagtctagctacggggctcatacttca 30471778
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 244 bits (123), Expect = 2e-61 Identities = 135/139 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 23744 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 23685 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 23684 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagtgcctgg 23625 Query: 121 tatgagcctcgtggagaag 139 ||||||||||||||||||| Sbjct: 23624 tatgagcctcgtggagaag 23606
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 244 bits (123), Expect = 2e-61 Identities = 135/139 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 92667 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggt 92608 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 92607 cgttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagtgcctgg 92548 Query: 121 tatgagcctcgtggagaag 139 ||||||||||||||||||| Sbjct: 92547 tatgagcctcgtggagaag 92529
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 200 bits (101), Expect = 2e-48 Identities = 117/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131099 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 131158 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 131159 cgttcgagcttttcctgggagtatggcatcggt----tacttcagcgccgtagcgcctgg 131214 Query: 121 ta 122 || Sbjct: 131215 ta 131216 Score = 200 bits (101), Expect = 2e-48 Identities = 117/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105779 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 105720 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 105719 cgttcgagcttttcctgggagtatggcatcggt----tacttcagcgccgtagcgcctgg 105664 Query: 121 ta 122 || Sbjct: 105663 ta 105662 Score = 145 bits (73), Expect = 1e-31 Identities = 95/105 (90%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 131227 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttacgtcct 131286 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 131287 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 131331 Score = 145 bits (73), Expect = 1e-31 Identities = 95/105 (90%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 105651 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttacgtcct 105592 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 105591 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 105547
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 200 bits (101), Expect = 2e-48 Identities = 117/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131092 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 131151 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 131152 cgttcgagcttttcctgggagtatggcatcggt----tacttcagcgccgtagcgcctgg 131207 Query: 121 ta 122 || Sbjct: 131208 ta 131209 Score = 200 bits (101), Expect = 2e-48 Identities = 117/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105777 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 105718 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 105717 cgttcgagcttttcctgggagtatggcatcggt----tacttcagcgccgtagcgcctgg 105662 Query: 121 ta 122 || Sbjct: 105661 ta 105660 Score = 145 bits (73), Expect = 1e-31 Identities = 95/105 (90%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 131220 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttacgtcct 131279 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 131280 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 131324 Score = 145 bits (73), Expect = 1e-31 Identities = 95/105 (90%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 105649 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttacgtcct 105590 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 105589 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 105545
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 194 bits (98), Expect = 1e-46 Identities = 104/106 (98%) Strand = Plus / Minus Query: 49 tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 108 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 24880 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 24821 Query: 109 cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccac 154 ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 24820 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccac 24775
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 192 bits (97), Expect = 5e-46 Identities = 116/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 568 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 567 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 512 Query: 121 ta 122 || Sbjct: 511 ta 510 Score = 121 bits (61), Expect = 2e-24 Identities = 92/105 (87%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||| Sbjct: 499 ggctcgaggcattttctctaccccttcttaccctgaaaaaacagggacaccgtgcgtcct 440 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 439 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 395
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 192 bits (97), Expect = 5e-46 Identities = 116/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134225 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 134284 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 134285 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 134340 Query: 121 ta 122 || Sbjct: 134341 ta 134342 Score = 192 bits (97), Expect = 5e-46 Identities = 116/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107681 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 107622 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 107621 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 107566 Query: 121 ta 122 || Sbjct: 107565 ta 107564 Score = 105 bits (53), Expect = 1e-19 Identities = 90/105 (85%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 ||||||||| |||||||||||| ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 134353 ggctcgaggtattttctctacctcttcttaccctaaaaaaacaggggcaccttgcgtcct 134412 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 134413 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 134457 Score = 105 bits (53), Expect = 1e-19 Identities = 90/105 (85%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 ||||||||| |||||||||||| ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 107553 ggctcgaggtattttctctacctcttcttaccctaaaaaaacaggggcaccttgcgtcct 107494 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 107493 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 107449
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 192 bits (97), Expect = 5e-46 Identities = 116/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138682 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 138741 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 138742 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 138797 Query: 121 ta 122 || Sbjct: 138798 ta 138799 Score = 192 bits (97), Expect = 5e-46 Identities = 116/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111378 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 111319 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 111318 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 111263 Query: 121 ta 122 || Sbjct: 111262 ta 111261 Score = 145 bits (73), Expect = 1e-31 Identities = 95/105 (90%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 138810 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgcgtcct 138869 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 138870 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 138914 Score = 145 bits (73), Expect = 1e-31 Identities = 95/105 (90%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 111250 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgcgtcct 111191 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 111190 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 111146
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 192 bits (97), Expect = 5e-46 Identities = 116/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137903 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 137962 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 137963 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 138018 Query: 121 ta 122 || Sbjct: 138019 ta 138020 Score = 192 bits (97), Expect = 5e-46 Identities = 116/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112042 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 111983 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 111982 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 111927 Query: 121 ta 122 || Sbjct: 111926 ta 111925 Score = 115 bits (58), Expect = 1e-22 Identities = 93/106 (87%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctg-aaaaagcagggtcacctnnngtcc 256 |||||||||||||| |||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 138031 ggctcgaggcatttcctctaccccttcttaccctgaaaaaagcaaggtcaccttgcgtcc 138090 Query: 257 ttaaacctataaccatctttnggctaacctancctnctncgtncct 302 || |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 138091 ttgaaccgataaccatctttcggctaacctagcctcctccgtccct 138136 Score = 115 bits (58), Expect = 1e-22 Identities = 93/106 (87%), Gaps = 1/106 (0%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctg-aaaaagcagggtcacctnnngtcc 256 |||||||||||||| |||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 111914 ggctcgaggcatttcctctaccccttcttaccctgaaaaaagcaaggtcaccttgcgtcc 111855 Query: 257 ttaaacctataaccatctttnggctaacctancctnctncgtncct 302 || |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 111854 ttgaaccgataaccatctttcggctaacctagcctcctccgtccct 111809
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 192 bits (97), Expect = 5e-46 Identities = 116/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133311 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 133370 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 133371 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 133426 Query: 121 ta 122 || Sbjct: 133427 ta 133428 Score = 192 bits (97), Expect = 5e-46 Identities = 116/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106971 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 106912 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 106911 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 106856 Query: 121 ta 122 || Sbjct: 106855 ta 106854 Score = 91.7 bits (46), Expect = 1e-15 Identities = 92/110 (83%), Gaps = 5/110 (4%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctg-----aaaaagcagggtcacctnnn 252 |||||| ||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 133439 ggctcggggcatttcctctaccccttcttaccctgccctgaaaaagcaaggtcaccttgc 133498 Query: 253 gtccttaaacctataaccatctttnggctaacctancctnctncgtncct 302 |||||| |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 133499 gtccttgaaccgataaccatctttcggctaacctagcctcctccgtccct 133548 Score = 91.7 bits (46), Expect = 1e-15 Identities = 92/110 (83%), Gaps = 5/110 (4%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctg-----aaaaagcagggtcacctnnn 252 |||||| ||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 106843 ggctcggggcatttcctctaccccttcttaccctgccctgaaaaagcaaggtcaccttgc 106784 Query: 253 gtccttaaacctataaccatctttnggctaacctancctnctncgtncct 302 |||||| |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 106783 gtccttgaaccgataaccatctttcggctaacctagcctcctccgtccct 106734
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 192 bits (97), Expect = 5e-46 Identities = 116/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 130116 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 130175 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130176 cgttcgagcttttcctgggagtatggcatcggt----tacttcagcgccgtagcgcctgg 130231 Query: 121 ta 122 || Sbjct: 130232 ta 130233 Score = 192 bits (97), Expect = 5e-46 Identities = 116/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 103329 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 103270 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 103269 cgttcgagcttttcctgggagtatggcatcggt----tacttcagcgccgtagcgcctgg 103214 Query: 121 ta 122 || Sbjct: 103213 ta 103212 Score = 129 bits (65), Expect = 7e-27 Identities = 94/105 (89%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 130244 ggctcgaggcattttctctaccccttcttaccctgaaaaa-cagggtcaccttgcgtcct 130302 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 130303 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 130347 Score = 129 bits (65), Expect = 7e-27 Identities = 94/105 (89%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 103201 ggctcgaggcattttctctaccccttcttaccctgaaaaa-cagggtcaccttgcgtcct 103143 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 103142 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 103098
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 192 bits (97), Expect = 5e-46 Identities = 116/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134504 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 134563 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 134564 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 134619 Query: 121 ta 122 || Sbjct: 134620 ta 134621 Score = 192 bits (97), Expect = 5e-46 Identities = 116/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107903 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 107844 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 107843 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 107788 Query: 121 ta 122 || Sbjct: 107787 ta 107786 Score = 105 bits (53), Expect = 1e-19 Identities = 90/105 (85%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 ||||||||| |||||||||||| ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 134632 ggctcgaggtattttctctacctcttcttaccctaaaaaaacaggggcaccttgcgtcct 134691 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 134692 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 134736 Score = 105 bits (53), Expect = 1e-19 Identities = 90/105 (85%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 ||||||||| |||||||||||| ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 107775 ggctcgaggtattttctctacctcttcttaccctaaaaaaacaggggcaccttgcgtcct 107716 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 107715 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 107671
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 192 bits (97), Expect = 5e-46 Identities = 116/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138033 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 138092 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 138093 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 138148 Query: 121 ta 122 || Sbjct: 138149 ta 138150 Score = 192 bits (97), Expect = 5e-46 Identities = 116/122 (95%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111266 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 111207 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 111206 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 111151 Query: 121 ta 122 || Sbjct: 111150 ta 111149 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 138161 ggctcggggcattttctctaccccttcttaccctgaaaaagcaggggcaccttgcgtcct 138220 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 138221 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 138265 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 111138 ggctcggggcattttctctaccccttcttaccctgaaaaagcaggggcaccttgcgtcct 111079 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 111078 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 111034
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 184 bits (93), Expect = 1e-43 Identities = 115/122 (94%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137828 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 137887 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 137888 cgttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctgg 137943 Query: 121 ta 122 || Sbjct: 137944 ta 137945 Score = 184 bits (93), Expect = 1e-43 Identities = 115/122 (94%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111269 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 111210 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 111209 cgttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctgg 111154 Query: 121 ta 122 || Sbjct: 111153 ta 111152 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 137956 ggctcggggcattttctctaccccttcttaccctgaaaaagcaggggcaccttgcgtcct 138015 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 138016 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 138060 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 111141 ggctcggggcattttctctaccccttcttaccctgaaaaagcaggggcaccttgcgtcct 111082 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 111081 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 111037
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 184 bits (93), Expect = 1e-43 Identities = 115/122 (94%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129991 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggc 130050 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 130051 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 130106 Query: 121 ta 122 || Sbjct: 130107 ta 130108 Score = 184 bits (93), Expect = 1e-43 Identities = 115/122 (94%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104644 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggc 104585 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 104584 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 104529 Query: 121 ta 122 || Sbjct: 104528 ta 104527 Score = 145 bits (73), Expect = 1e-31 Identities = 95/105 (90%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 130119 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttacgtcct 130178 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 130179 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 130223 Score = 145 bits (73), Expect = 1e-31 Identities = 95/105 (90%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 104516 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttacgtcct 104457 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 104456 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 104412
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 184 bits (93), Expect = 1e-43 Identities = 115/122 (94%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 140426 ggtattctctacctacccacctgtgttggtttcgggtacaggtacccttttgttgaaggt 140485 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 140486 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 140541 Query: 121 ta 122 || Sbjct: 140542 ta 140543 Score = 184 bits (93), Expect = 1e-43 Identities = 115/122 (94%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 113231 ggtattctctacctacccacctgtgttggtttcgggtacaggtacccttttgttgaaggt 113172 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 113171 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 113116 Query: 121 ta 122 || Sbjct: 113115 ta 113114 Score = 81.8 bits (41), Expect = 1e-12 Identities = 92/110 (83%), Gaps = 5/110 (4%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctg----aaaaagcagggtcacctnnng 253 |||||||||||||| |||||||||||||||||||| |||||||| |||||||| | Sbjct: 140554 ggctcgaggcatttcctctaccccttcttaccctgaaaaaaaaagcaaggtcaccttgcg 140613 Query: 254 tccttaaacctat-aaccatctttnggctaacctancctnctncgtncct 302 ||||| |||| || ||||| |||| |||||||||| ||| || ||| ||| Sbjct: 140614 tccttgaaccgataaaccacctttcggctaacctagcctcctccgtccct 140663 Score = 81.8 bits (41), Expect = 1e-12 Identities = 92/110 (83%), Gaps = 5/110 (4%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctg----aaaaagcagggtcacctnnng 253 |||||||||||||| |||||||||||||||||||| |||||||| |||||||| | Sbjct: 113103 ggctcgaggcatttcctctaccccttcttaccctgaaaaaaaaagcaaggtcaccttgcg 113044 Query: 254 tccttaaacctat-aaccatctttnggctaacctancctnctncgtncct 302 ||||| |||| || ||||| |||| |||||||||| ||| || ||| ||| Sbjct: 113043 tccttgaaccgataaaccacctttcggctaacctagcctcctccgtccct 112994
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 184 bits (93), Expect = 1e-43 Identities = 115/122 (94%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1675 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 1616 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 1615 cgttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctgg 1560 Query: 121 ta 122 || Sbjct: 1559 ta 1558 Score = 89.7 bits (45), Expect = 6e-15 Identities = 88/105 (83%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||| ||||||||||||||||||| |||||||||| | | ||| ||||| ||||| Sbjct: 1547 ggctcggggcattttctctacccctttttaccctgaacacaccgggacaccttgcgtcct 1488 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 1487 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 1443
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 184 bits (93), Expect = 1e-43 Identities = 115/122 (94%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131322 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 131381 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 131382 cgttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctgg 131437 Query: 121 ta 122 || Sbjct: 131438 ta 131439 Score = 184 bits (93), Expect = 1e-43 Identities = 115/122 (94%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105442 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 105383 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 105382 cgttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctgg 105327 Query: 121 ta 122 || Sbjct: 105326 ta 105325 Score = 113 bits (57), Expect = 4e-22 Identities = 91/105 (86%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||| ||||||||||||||||||||||||||||||||| ||||| ||||| || || Sbjct: 131450 ggctcggggcattttctctaccccttcttaccctgaaaaaacagggacaccttgcgttct 131509 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 131510 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 131554 Score = 113 bits (57), Expect = 4e-22 Identities = 91/105 (86%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||| ||||||||||||||||||||||||||||||||| ||||| ||||| || || Sbjct: 105314 ggctcggggcattttctctaccccttcttaccctgaaaaaacagggacaccttgcgttct 105255 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 105254 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 105210
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 184 bits (93), Expect = 1e-43 Identities = 115/122 (94%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1694 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 1635 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||| Sbjct: 1634 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtatcgcctgg 1579 Query: 121 ta 122 || Sbjct: 1578 ta 1577 Score = 83.8 bits (42), Expect = 4e-13 Identities = 45/46 (97%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcaggg 243 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1566 ggctcgaggcattttctctaccccttcttaccctgaaaaaccaggg 1521
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 184 bits (93), Expect = 1e-43 Identities = 115/122 (94%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2171 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 2112 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 2111 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 2056 Query: 121 ta 122 || Sbjct: 2055 ta 2054 Score = 129 bits (65), Expect = 7e-27 Identities = 94/105 (89%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 2043 ggctcgaggcattttctctaccccttcttaccctgaaaaa-cagggtcacctttcgtcct 1985 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 1984 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 1940
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 184 bits (93), Expect = 1e-43 Identities = 115/122 (94%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 132547 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttaaaggt 132606 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 132607 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 132662 Query: 121 ta 122 || Sbjct: 132663 ta 132664 Score = 184 bits (93), Expect = 1e-43 Identities = 115/122 (94%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 105424 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttaaaggt 105365 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 105364 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 105309 Query: 121 ta 122 || Sbjct: 105308 ta 105307 Score = 137 bits (69), Expect = 3e-29 Identities = 94/105 (89%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 132675 ggctcgaggcatttcctctaccccttcttaccctgaaaaagcagggtcaccttacgtcct 132734 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 132735 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 132779 Score = 137 bits (69), Expect = 3e-29 Identities = 94/105 (89%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 105296 ggctcgaggcatttcctctaccccttcttaccctgaaaaagcagggtcaccttacgtcct 105237 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 105236 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 105192
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 184 bits (93), Expect = 1e-43 Identities = 115/122 (94%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132283 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 132342 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 132343 cgttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctgg 132398 Query: 121 ta 122 || Sbjct: 132399 ta 132400 Score = 184 bits (93), Expect = 1e-43 Identities = 115/122 (94%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106366 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 106307 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 106306 cgttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctgg 106251 Query: 121 ta 122 || Sbjct: 106250 ta 106249 Score = 121 bits (61), Expect = 2e-24 Identities = 92/105 (87%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||| ||||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 132411 ggctcggggcattttctctaccccttcttaccctgaaaaaacagggacaccttgcgtcct 132470 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 132471 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 132515 Score = 121 bits (61), Expect = 2e-24 Identities = 92/105 (87%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||| ||||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 106238 ggctcggggcattttctctaccccttcttaccctgaaaaaacagggacaccttgcgtcct 106179 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 106178 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 106134
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 184 bits (93), Expect = 1e-43 Identities = 115/122 (94%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1677 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 1618 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 1617 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 1562 Query: 121 ta 122 || Sbjct: 1561 ta 1560 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 ||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 1549 ggctcgaggtattttctctaccccttcttaccctgaaaaagcaggggcaccttgcgtcct 1490 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 1489 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 1445
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 178 bits (90), Expect = 8e-42 Identities = 116/123 (94%), Gaps = 5/123 (4%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccc-ttttgttgaagg 59 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 128853 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttttgttgaagg 128912 Query: 60 tcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctg 119 |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 128913 tcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctg 128968 Query: 120 gta 122 ||| Sbjct: 128969 gta 128971 Score = 178 bits (90), Expect = 8e-42 Identities = 116/123 (94%), Gaps = 5/123 (4%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccc-ttttgttgaagg 59 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 103603 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttttgttgaagg 103544 Query: 60 tcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctg 119 |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 103543 tcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctg 103488 Query: 120 gta 122 ||| Sbjct: 103487 gta 103485 Score = 121 bits (61), Expect = 2e-24 Identities = 92/105 (87%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||| ||||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 128982 ggctcggggcattttctctaccccttcttaccctgaaaaaacaggggcaccttgcgtcct 129041 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 129042 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 129086 Score = 121 bits (61), Expect = 2e-24 Identities = 92/105 (87%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||| ||||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 103474 ggctcggggcattttctctaccccttcttaccctgaaaaaacaggggcaccttgcgtcct 103415 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 103414 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 103370
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 176 bits (89), Expect = 3e-41 Identities = 114/126 (90%) Strand = Plus / Plus Query: 177 agcgcttggtactnntncctcggctcgaggcattttctctaccccttcttaccctgaaaa 236 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5 agcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaa 64 Query: 237 agcagggtcacctnnngtccttaaacctataaccatctttnggctaacctancctnctnc 296 ||||||||||||| |||||||||||||||||||||||| |||||||||| ||| || | Sbjct: 65 agcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctcc 124 Query: 297 gtncct 302 || ||| Sbjct: 125 gtccct 130
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 176 bits (89), Expect = 3e-41 Identities = 114/122 (93%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 141203 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgttgaaggt 141262 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||| Sbjct: 141263 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcttgg 141318 Query: 121 ta 122 || Sbjct: 141319 ta 141320 Score = 176 bits (89), Expect = 3e-41 Identities = 114/122 (93%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 112125 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgttgaaggt 112066 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||| Sbjct: 112065 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcttgg 112010 Query: 121 ta 122 || Sbjct: 112009 ta 112008 Score = 139 bits (70), Expect = 7e-30 Identities = 119/140 (85%) Strand = Plus / Plus Query: 163 tacttcagngntgnagcgcttggtactnntncctcggctcgaggcattttctctacccct 222 |||||||| | | ||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 141296 tacttcagcgccgtagcgcttggtactcggacctcggctcgaggcattttcactacccct 141355 Query: 223 tcttaccctgaaaaagcagggtcacctnnngtccttaaacctataaccatctttnggcta 282 ||||||||||| ||||||||| ||||| || |||||||| |||||||||||| ||||| Sbjct: 141356 tcttaccctgacaaagcagggacaccttacgttcttaaaccgataaccatctttcggcta 141415 Query: 283 acctancctnctncgtncct 302 ||||| ||| || ||| ||| Sbjct: 141416 acctagcctcctccgtccct 141435 Score = 139 bits (70), Expect = 7e-30 Identities = 119/140 (85%) Strand = Plus / Minus Query: 163 tacttcagngntgnagcgcttggtactnntncctcggctcgaggcattttctctacccct 222 |||||||| | | ||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 112032 tacttcagcgccgtagcgcttggtactcggacctcggctcgaggcattttcactacccct 111973 Query: 223 tcttaccctgaaaaagcagggtcacctnnngtccttaaacctataaccatctttnggcta 282 ||||||||||| ||||||||| ||||| || |||||||| |||||||||||| ||||| Sbjct: 111972 tcttaccctgacaaagcagggacaccttacgttcttaaaccgataaccatctttcggcta 111913 Query: 283 acctancctnctncgtncct 302 ||||| ||| || ||| ||| Sbjct: 111912 acctagcctcctccgtccct 111893
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 176 bits (89), Expect = 3e-41 Identities = 114/122 (93%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134916 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 134975 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||| Sbjct: 134976 cgttcgagcttttcctgggagtatggcgtgggt----tacttcagcgccgtagcgcctgg 135031 Query: 121 ta 122 || Sbjct: 135032 ta 135033 Score = 176 bits (89), Expect = 3e-41 Identities = 114/122 (93%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107509 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 107450 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||| Sbjct: 107449 cgttcgagcttttcctgggagtatggcgtgggt----tacttcagcgccgtagcgcctgg 107394 Query: 121 ta 122 || Sbjct: 107393 ta 107392 Score = 145 bits (73), Expect = 1e-31 Identities = 95/105 (90%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135044 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttacgtcct 135103 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 135104 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 135148 Score = 145 bits (73), Expect = 1e-31 Identities = 95/105 (90%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 107381 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttacgtcct 107322 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 107321 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 107277
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 174 bits (88), Expect = 1e-40 Identities = 206/247 (83%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 17 ccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcct 76 ||||||||||| ||||| |||||| |||| ||||||||||||||| || ||||||||||| Sbjct: 58142 ccacctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttcct 58201 Query: 77 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 136 | |||||||||| | ||||||||||| | || || ||||| ||||||||||| Sbjct: 58202 gaaagtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtggta 58256 Query: 137 aagcaattgctagtccacggggctcatacttcagngntgnagcgcttggtactnntncct 196 ||||||| ||||||||| |||||||||||||| | || ||||||||||||| ||| Sbjct: 58257 aagcaatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggacct 58316 Query: 197 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcc 256 |||| |||||||||||||| |||||||||||||||||||| |||||||||| |||| Sbjct: 58317 tggcttaaggcattttctcta-cccttcttaccctgaaaaaggagggtcaccttgtgtcc 58375 Query: 257 ttaaacc 263 ||||||| Sbjct: 58376 ttaaacc 58382
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 174 bits (88), Expect = 1e-40 Identities = 206/247 (83%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 17 ccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcct 76 ||||||||||| ||||| |||||| |||| ||||||||||||||| || ||||||||||| Sbjct: 135353 ccacctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttcct 135412 Query: 77 gggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggag 136 | |||||||||| | ||||||||||| | || || ||||| ||||||||||| Sbjct: 135413 gaaagtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtggta 135467 Query: 137 aagcaattgctagtccacggggctcatacttcagngntgnagcgcttggtactnntncct 196 ||||||| ||||||||| |||||||||||||| | || ||||||||||||| ||| Sbjct: 135468 aagcaatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggacct 135527 Query: 197 cggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcc 256 |||| |||||||||||||| |||||||||||||||||||| |||||||||| |||| Sbjct: 135528 tggcttaaggcattttctcta-cccttcttaccctgaaaaaggagggtcaccttgtgtcc 135586 Query: 257 ttaaacc 263 ||||||| Sbjct: 135587 ttaaacc 135593
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 168 bits (85), Expect = 8e-39 Identities = 101/109 (92%) Strand = Plus / Minus Query: 194 cctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnng 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1160 cctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtg 1101 Query: 254 tccttaaacctataaccatctttnggctaacctancctnctncgtncct 302 ||||||||||||||||||||||| |||||||||| ||| || ||| ||| Sbjct: 1100 tccttaaacctataaccatctttcggctaacctagcctcctccgtccct 1052
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 168 bits (85), Expect = 8e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 126191 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgttgaaggt 126250 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||| ||||||| ||| ||| ||||||||||||||||||||||| Sbjct: 126251 cgttcgagcttttcctgagagtatgacatgggt----tacttcagcgccgtagcgcctgg 126306 Query: 121 ta 122 || Sbjct: 126307 ta 126308 Score = 168 bits (85), Expect = 8e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 108731 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgttgaaggt 108672 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||| ||||||| ||| ||| ||||||||||||||||||||||| Sbjct: 108671 cgttcgagcttttcctgagagtatgacatgggt----tacttcagcgccgtagcgcctgg 108616 Query: 121 ta 122 || Sbjct: 108615 ta 108614 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 126319 ggctcgaggcatttcctctaccccttcttaccctgaaaaagcaaggtcaccttgcgtcct 126378 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 126379 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 126423 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 108603 ggctcgaggcatttcctctaccccttcttaccctgaaaaagcaaggtcaccttgcgtcct 108544 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 108543 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 108499
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 168 bits (85), Expect = 8e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 130191 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccatttgttgaaggt 130250 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| | | ||||||||||| ||||||||||| Sbjct: 130251 cgttcgagcttttcctgggagtatggcatggat----tacttcagcgctgtagcgcctgg 130306 Query: 121 ta 122 || Sbjct: 130307 ta 130308 Score = 168 bits (85), Expect = 8e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 105203 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccatttgttgaaggt 105144 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| | | ||||||||||| ||||||||||| Sbjct: 105143 cgttcgagcttttcctgggagtatggcatggat----tacttcagcgctgtagcgcctgg 105088 Query: 121 ta 122 || Sbjct: 105087 ta 105086 Score = 131 bits (66), Expect = 2e-27 Identities = 118/140 (84%) Strand = Plus / Plus Query: 163 tacttcagngntgnagcgcttggtactnntncctcggctcgaggcattttctctacccct 222 |||||||| | || ||||| ||||||| | | ||||||||||||||||||||||||| Sbjct: 130284 tacttcagcgctgtagcgcctggtactcgaactttggctcgaggcattttctctacccct 130343 Query: 223 tcttaccctgaaaaagcagggtcacctnnngtccttaaacctataaccatctttnggcta 282 | ||||||||||||||||||| ||||| |||||| |||| |||||||||||| ||||| Sbjct: 130344 tattaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 130403 Query: 283 acctancctnctncgtncct 302 ||||| ||| || ||| ||| Sbjct: 130404 acctagcctcctccgtccct 130423 Score = 131 bits (66), Expect = 2e-27 Identities = 118/140 (84%) Strand = Plus / Minus Query: 163 tacttcagngntgnagcgcttggtactnntncctcggctcgaggcattttctctacccct 222 |||||||| | || ||||| ||||||| | | ||||||||||||||||||||||||| Sbjct: 105110 tacttcagcgctgtagcgcctggtactcgaactttggctcgaggcattttctctacccct 105051 Query: 223 tcttaccctgaaaaagcagggtcacctnnngtccttaaacctataaccatctttnggcta 282 | ||||||||||||||||||| ||||| |||||| |||| |||||||||||| ||||| Sbjct: 105050 tattaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 104991 Query: 283 acctancctnctncgtncct 302 ||||| ||| || ||| ||| Sbjct: 104990 acctagcctcctccgtccct 104971
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 167 bits (84), Expect = 3e-38 Identities = 112/121 (92%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1691 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 1632 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 1631 cgttcgagcttttcctgggagtatggctagggt----tacttcagcgccgtagcgcctgg 1576 Query: 121 t 121 | Sbjct: 1575 t 1575 Score = 113 bits (57), Expect = 4e-22 Identities = 92/105 (87%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 ||||||||| ||||||||||||||||||||||||| |||||||||| ||||| ||||| Sbjct: 1564 ggctcgaggtattttctctaccccttcttaccctg-aaaagcaggggcaccttgcgtcct 1506 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 1505 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 1461
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 167 bits (84), Expect = 3e-38 Identities = 93/96 (96%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 90021 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 89962 Query: 61 cgttcgagcttttcctgggagtatggcatcggttac 96 ||||||||||||||||||||||||||||| |||||| Sbjct: 89961 cgttcgagcttttcctgggagtatggcatgggttac 89926 Score = 105 bits (53), Expect = 1e-19 Identities = 115/140 (82%), Gaps = 4/140 (2%) Strand = Plus / Minus Query: 163 tacttcagngntgnagcgcttggtactnntncctcggctcgaggcattttctctacccct 222 |||||||| | || ||||||| ||||| | | ||||||||||||||||||||||||| Sbjct: 89928 tacttcagcgctgtagcgcttagtactcggacattggctcgaggcattttctctacccct 89869 Query: 223 tcttaccctgaaaaagcagggtcacctnnngtccttaaacctataaccatctttnggcta 282 ||||||||||||| ||||| |||| |||||| |||| |||||||||||| ||||| Sbjct: 89868 tcttaccctgaaa----agggtaaccttgcgtccttgaaccgataaccatctttcggcta 89813 Query: 283 acctancctnctncgtncct 302 ||||| ||| || ||| ||| Sbjct: 89812 acctagcctcctccgtccct 89793
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 134624 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagt 134683 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 134684 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 134739 Query: 121 tat 123 ||| Sbjct: 134740 tat 134742 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 108006 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagt 107947 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 107946 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 107891 Query: 121 tat 123 ||| Sbjct: 107890 tat 107888 Score = 121 bits (61), Expect = 2e-24 Identities = 92/105 (87%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||| ||||||||| ||||| || || Sbjct: 134752 ggctcgaggcattttctctaccccttcttaccctgacaaagcagggacaccttacgttct 134811 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 134812 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 134856 Score = 121 bits (61), Expect = 2e-24 Identities = 92/105 (87%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||| ||||||||| ||||| || || Sbjct: 107878 ggctcgaggcattttctctaccccttcttaccctgacaaagcagggacaccttacgttct 107819 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 107818 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 107774
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 135262 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagt 135321 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 135322 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 135377 Query: 121 tat 123 ||| Sbjct: 135378 tat 135380 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 108295 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagt 108236 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 108235 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 108180 Query: 121 tat 123 ||| Sbjct: 108179 tat 108177 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 135390 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttct 135449 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 135450 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 135494 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 108167 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttct 108108 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 108107 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 108063
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 3200 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagt 3141 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 3140 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 3085 Query: 121 tat 123 ||| Sbjct: 3084 tat 3082 Score = 121 bits (61), Expect = 2e-24 Identities = 92/105 (87%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||| ||||||||| ||||| || || Sbjct: 3072 ggctcgaggcattttctctaccccttcttaccctgacaaagcagggacaccttacgttct 3013 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 3012 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 2968
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 133870 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgt 133929 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 133930 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 133985 Query: 121 tat 123 ||| Sbjct: 133986 tat 133988 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 107166 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgt 107107 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 107106 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 107051 Query: 121 tat 123 ||| Sbjct: 107050 tat 107048 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 133998 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttct 134057 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 134058 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 134102 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 107038 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttct 106979 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 106978 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 106934
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 3445 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagt 3386 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 3385 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 3330 Query: 121 tat 123 ||| Sbjct: 3329 tat 3327 Score = 121 bits (61), Expect = 2e-24 Identities = 92/105 (87%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||| ||||||||| ||||| || || Sbjct: 3317 ggctcgaggcattttctctaccccttcttaccctgacaaagcagggacaccttacgttct 3258 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 3257 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 3213
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 134005 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgt 134064 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 134065 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 134120 Query: 121 tat 123 ||| Sbjct: 134121 tat 134123 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 107338 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgt 107279 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 107278 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 107223 Query: 121 tat 123 ||| Sbjct: 107222 tat 107220 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 134133 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttct 134192 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 134193 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 134237 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 107210 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttct 107151 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 107150 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 107106
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 134003 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgt 134062 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 134063 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 134118 Query: 121 tat 123 ||| Sbjct: 134119 tat 134121 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 107335 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgt 107276 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 107275 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 107220 Query: 121 tat 123 ||| Sbjct: 107219 tat 107217 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 134131 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttct 134190 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 134191 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 134235 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 107207 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttct 107148 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 107147 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 107103
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 133915 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgt 133974 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 133975 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 134030 Query: 121 tat 123 ||| Sbjct: 134031 tat 134033 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 107213 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgt 107154 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 107153 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 107098 Query: 121 tat 123 ||| Sbjct: 107097 tat 107095 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 134043 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttct 134102 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 134103 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 134147 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 107085 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttct 107026 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 107025 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 106981
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 134622 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagt 134681 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 134682 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 134737 Query: 121 tat 123 ||| Sbjct: 134738 tat 134740 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 108004 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagt 107945 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 107944 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 107889 Query: 121 tat 123 ||| Sbjct: 107888 tat 107886 Score = 121 bits (61), Expect = 2e-24 Identities = 92/105 (87%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||| ||||||||| ||||| || || Sbjct: 134750 ggctcgaggcattttctctaccccttcttaccctgacaaagcagggacaccttacgttct 134809 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 134810 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 134854 Score = 121 bits (61), Expect = 2e-24 Identities = 92/105 (87%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||| ||||||||| ||||| || || Sbjct: 107876 ggctcgaggcattttctctaccccttcttaccctgacaaagcagggacaccttacgttct 107817 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 107816 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 107772
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 134353 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagt 134412 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 134413 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 134468 Query: 121 tat 123 ||| Sbjct: 134469 tat 134471 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 107785 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagt 107726 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 107725 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 107670 Query: 121 tat 123 ||| Sbjct: 107669 tat 107667 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 134481 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttct 134540 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 134541 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 134585 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 107657 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttct 107598 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 107597 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 107553
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 133882 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgt 133941 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 133942 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 133997 Query: 121 tat 123 ||| Sbjct: 133998 tat 134000 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 107180 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgt 107121 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 107120 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 107065 Query: 121 tat 123 ||| Sbjct: 107064 tat 107062 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 134010 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttct 134069 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 134070 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 134114 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 107052 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttct 106993 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 106992 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 106948
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 163 bits (82), Expect = 5e-37 Identities = 113/123 (91%), Gaps = 4/123 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 1136 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagt 1077 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 1076 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 1021 Query: 121 tat 123 ||| Sbjct: 1020 tat 1018 Score = 147 bits (74), Expect = 3e-32 Identities = 77/78 (98%) Strand = Plus / Minus Query: 12 cctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagctt 71 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1702 cctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagctt 1643 Query: 72 ttcctgggagtatggcat 89 |||||||||||||||||| Sbjct: 1642 ttcctgggagtatggcat 1625 Score = 105 bits (53), Expect = 1e-19 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 ||||||||||||||||||||||||||||||||||| ||||||||| ||||| || || Sbjct: 1008 ggctcgaggcattttctctaccccttcttaccctg-caaagcagggacaccttacgttct 950 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 949 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 905
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 161 bits (81), Expect = 2e-36 Identities = 112/122 (91%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 87933 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccatttgttgaaggt 87874 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| ||| Sbjct: 87873 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgctgtagcgcttgg 87818 Query: 121 ta 122 || Sbjct: 87817 ta 87816 Score = 115 bits (58), Expect = 1e-22 Identities = 116/140 (82%), Gaps = 5/140 (3%) Strand = Plus / Minus Query: 163 tacttcagngntgnagcgcttggtactnntncctcggctcgaggcattttctctacccct 222 |||||||| | || ||||||||||||| | | ||||||||||||||||||||||||| Sbjct: 87840 tacttcagcgctgtagcgcttggtactcggacattggctcgaggcattttctctacccct 87781 Query: 223 tcttaccctgaaaaagcagggtcacctnnngtccttaaacctataaccatctttnggcta 282 |||||||||||| |||||||||| |||||| |||| |||||||||||| ||||| Sbjct: 87780 tcttaccctgaa-----agggtcaccttgcgtccttgaaccgataaccatctttcggcta 87726 Query: 283 acctancctnctncgtncct 302 ||||| ||| || ||| ||| Sbjct: 87725 acctagcctcctccgtccct 87706
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 161 bits (81), Expect = 2e-36 Identities = 87/89 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 943 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccatttgttgaaggt 884 Query: 61 cgttcgagcttttcctgggagtatggcat 89 ||||||||||||||||||||||||||||| Sbjct: 883 cgttcgagcttttcctgggagtatggcat 855 Score = 121 bits (61), Expect = 2e-24 Identities = 92/105 (87%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||| Sbjct: 816 ggctcgaggcattttctctaccccttattaccctgaaaaagcaggggcaccatgcgtcct 757 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 756 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 712
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 161 bits (81), Expect = 2e-36 Identities = 94/97 (96%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccc-ttttgttgaagg 59 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1697 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttttgttgaagg 1638 Query: 60 tcgttcgagcttttcctgggagtatggcatcggttac 96 |||||||||||||||||||||||||||||| |||||| Sbjct: 1637 tcgttcgagcttttcctgggagtatggcattggttac 1601
>gb|AC151709.9| Medicago truncatula clone mth2-31g22, complete sequence Length = 116699 Score = 155 bits (78), Expect = 1e-34 Identities = 87/90 (96%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 77303 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtttaaggt 77362 Query: 61 cgttcgagcttttcctgggagtatggcatc 90 |||||||||||||| ||||||||||||||| Sbjct: 77363 cgttcgagcttttcttgggagtatggcatc 77392 Score = 91.7 bits (46), Expect = 1e-15 Identities = 90/106 (84%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagca-gggtcacctnnngtcc 256 |||| ||| ||||||||||||||||||||||||||||||| || ||| ||||| || | Sbjct: 77431 ggctggagccattttctctaccccttcttaccctgaaaaaacagggggcaccttgtgttc 77490 Query: 257 ttaaacctataaccatctttnggctaacctancctnctncgtncct 302 || |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 77491 ttgaaccgataaccatctttcggctaacctagcctcctccgtccct 77536
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 155 bits (78), Expect = 1e-34 Identities = 87/90 (96%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5897 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtttaaggt 5838 Query: 61 cgttcgagcttttcctgggagtatggcatc 90 |||||||||||||| ||||||||||||||| Sbjct: 5837 cgttcgagcttttcttgggagtatggcatc 5808 Score = 99.6 bits (50), Expect = 6e-18 Identities = 91/106 (85%), Gaps = 1/106 (0%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagca-gggtcacctnnngtcc 256 |||| ||||||||||||||||||||||||||||||||||| || ||| ||||| || | Sbjct: 5769 ggctggaggcattttctctaccccttcttaccctgaaaaaacagggggcaccttgtgttc 5710 Query: 257 ttaaacctataaccatctttnggctaacctancctnctncgtncct 302 || |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 5709 ttgaaccgataaccatctttcggctaacctagcctcctccgtccct 5664
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 155 bits (78), Expect = 1e-34 Identities = 87/90 (96%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22028 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtttaaggt 22087 Query: 61 cgttcgagcttttcctgggagtatggcatc 90 |||||||||||||| ||||||||||||||| Sbjct: 22088 cgttcgagcttttcttgggagtatggcatc 22117 Score = 99.6 bits (50), Expect = 6e-18 Identities = 91/106 (85%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagca-gggtcacctnnngtcc 256 |||| ||||||||||||||||||||||||||||||||||| || ||| ||||| || | Sbjct: 22156 ggctggaggcattttctctaccccttcttaccctgaaaaaacagggggcaccttgtgttc 22215 Query: 257 ttaaacctataaccatctttnggctaacctancctnctncgtncct 302 || |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 22216 ttgaaccgataaccatctttcggctaacctagcctcctccgtccct 22261
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 155 bits (78), Expect = 1e-34 Identities = 88/90 (97%), Gaps = 1/90 (1%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1714 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 1655 Query: 61 cgttcg-agcttttcctgggagtatggcat 89 |||||| ||||||||||||||||||||||| Sbjct: 1654 cgttcgaagcttttcctgggagtatggcat 1625
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 153 bits (77), Expect = 5e-34 Identities = 87/89 (97%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1708 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacc-ttttgttgaaggt 1650 Query: 61 cgttcgagcttttcctgggagtatggcat 89 ||||||||||||||||||||||||||||| Sbjct: 1649 cgttcgagcttttcctgggagtatggcat 1621
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 145 bits (73), Expect = 1e-31 Identities = 92/97 (94%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 1726 ggtattctctacctacccacctgtgtcggtttcgggtaaaggtaaccttttgttgaaggt 1667 Query: 61 cgttcg-agcttttcctgggagtatggcatcggttac 96 |||||| ||||||||||||||||||||||| |||||| Sbjct: 1666 cgttcgaagcttttcctgggagtatggcatgggttac 1630
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 145 bits (73), Expect = 1e-31 Identities = 110/122 (90%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1687 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgttgaaggt 1628 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 |||||||||||||| ||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1627 cgttcgagcttttcttgggagtgtggcatgggt----tacttcagcaccgtagcgcctgg 1572 Query: 121 ta 122 || Sbjct: 1571 ta 1570 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccct 231 |||| |||| ||||||||||||||| |||||||| Sbjct: 1559 ggcttgaggtattttctctacccctccttaccct 1526
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 145 bits (73), Expect = 1e-31 Identities = 107/118 (90%), Gaps = 4/118 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 126760 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccacttgttgaaggt 126819 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 118 |||||||||||||| |||||||||| ||| ||| |||||||||||| |||||||| Sbjct: 126820 cgttcgagcttttcttgggagtatgacatgggt----tacttcagcgccatagcgcct 126873 Score = 145 bits (73), Expect = 1e-31 Identities = 107/118 (90%), Gaps = 4/118 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 96687 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccacttgttgaaggt 96628 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 118 |||||||||||||| |||||||||| ||| ||| |||||||||||| |||||||| Sbjct: 96627 cgttcgagcttttcttgggagtatgacatgggt----tacttcagcgccatagcgcct 96574 Score = 54.0 bits (27), Expect = 3e-04 Identities = 43/50 (86%) Strand = Plus / Plus Query: 253 gtccttaaacctataaccatctttnggctaacctancctnctncgtncct 302 |||||| |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 126945 gtccttgaaccgataaccatctttcggctaacctagcctcctccgtccct 126994 Score = 54.0 bits (27), Expect = 3e-04 Identities = 43/50 (86%) Strand = Plus / Minus Query: 253 gtccttaaacctataaccatctttnggctaacctancctnctncgtncct 302 |||||| |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 96502 gtccttgaaccgataaccatctttcggctaacctagcctcctccgtccct 96453 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctacccctt 223 |||||||||||||||||| ||||||| Sbjct: 126888 ggctcgaggcattttctccacccctt 126913 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctacccctt 223 |||||||||||||||||| ||||||| Sbjct: 96559 ggctcgaggcattttctccacccctt 96534
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 143 bits (72), Expect = 4e-31 Identities = 81/84 (96%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 |||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4882 ggtattttctacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 4941 Query: 61 cgttcgagcttttcctgggagtat 84 |||||||||||||||||||||||| Sbjct: 4942 cgttcgagcttttcctgggagtat 4965 Score = 69.9 bits (35), Expect = 5e-09 Identities = 88/107 (82%), Gaps = 6/107 (5%) Strand = Plus / Plus Query: 202 cgaggcattttctctaccccttctta----ccctgaaaaa--gcagggtcacctnnngtc 255 |||||||||||||||||||||||| | |||||||||| ||| |||||||| ||| Sbjct: 5013 cgaggcattttctctaccccttctgaccctccctgaaaaaaggcaaggtcaccttgcgtc 5072 Query: 256 cttaaacctataaccatctttnggctaacctancctnctncgtncct 302 ||| |||| |||||||| ||| |||||||||| ||| || ||| ||| Sbjct: 5073 cttgaaccgataaccatttttcggctaacctagcctcctccgtccct 5119
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 143 bits (72), Expect = 4e-31 Identities = 90/96 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct: 1771 ggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagt 1712 Query: 61 cgttcgagcttttcctgggagtatggcatcggttac 96 ||||||||||||||||||||||||||||| |||||| Sbjct: 1711 cgttcgagcttttcctgggagtatggcatgggttac 1676 Score = 121 bits (61), Expect = 2e-24 Identities = 92/105 (87%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||||||||||||||||||||||||||||||||| ||||||||| ||||| || || Sbjct: 1644 ggctcgaggcattttctctaccccttcttaccctgacaaagcagggacaccttacgttct 1585 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 1584 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 1540
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 139 bits (70), Expect = 7e-30 Identities = 85/90 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||| |||| Sbjct: 6183 ggtattctctacctacccacctgtgtcggtttccggtacaggtaccctcttgttgtaggt 6124 Query: 61 cgttcgagcttttcctgggagtatggcatc 90 ||||||| |||||||||||||||||||||| Sbjct: 6123 cgttcgaacttttcctgggagtatggcatc 6094 Score = 69.9 bits (35), Expect = 5e-09 Identities = 86/102 (84%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 205 ggcattttctctacccctt-cttaccctgaaaaag-caggg--tcacctnnngtccttaa 260 ||||||||||||||||||| |||||||||||||| ||||| |||||| || ||| | Sbjct: 6037 ggcattttctctaccccttacttaccctgaaaaaaacagggagtcaccttatgttcttga 5978 Query: 261 acctataaccatctttnggctaacctancctnctncgtncct 302 ||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 5977 accgataaccatctttcggctaacctagcctcctccgtccct 5936
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 139 bits (70), Expect = 7e-30 Identities = 85/90 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||| |||| Sbjct: 6183 ggtattctctacctacccacctgtgtcggtttccggtacaggtaccctcttgttgtaggt 6124 Query: 61 cgttcgagcttttcctgggagtatggcatc 90 ||||||| |||||||||||||||||||||| Sbjct: 6123 cgttcgaacttttcctgggagtatggcatc 6094 Score = 69.9 bits (35), Expect = 5e-09 Identities = 86/102 (84%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 205 ggcattttctctacccctt-cttaccctgaaaaag-caggg--tcacctnnngtccttaa 260 ||||||||||||||||||| |||||||||||||| ||||| |||||| || ||| | Sbjct: 6037 ggcattttctctaccccttacttaccctgaaaaaaacagggagtcaccttatgttcttga 5978 Query: 261 acctataaccatctttnggctaacctancctnctncgtncct 302 ||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 5977 accgataaccatctttcggctaacctagcctcctccgtccct 5936
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 137 bits (69), Expect = 3e-29 Identities = 84/89 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||| Sbjct: 2139 ggtattctctacctacctacctgtgttagtttcgggtacaggtacccttttgttgaaggt 2198 Query: 61 cgttcgagcttttcctgggagtatggcat 89 |||||||||||||||| |||||||||||| Sbjct: 2199 cgttcgagcttttcctaggagtatggcat 2227 Score = 50.1 bits (25), Expect = 0.005 Identities = 83/105 (79%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||| |||| |||||||||||||||| | ||| | ||||| |||| ||||| |||| Sbjct: 2267 ggcttgaggtattttctctaccccttttgaccgtaaaaaaataggggcaccttgcatcct 2326 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||| ||| ||||||||| ||| || ||| ||| Sbjct: 2327 tgaaccgataaccatttttctgctaacctagcctcctccgtacct 2371
>emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0083D13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104259 Score = 133 bits (67), Expect = 4e-28 Identities = 88/97 (90%) Strand = Plus / Minus Query: 153 acggggctcatacttcagngntgnagcgcttggtactnntncctcggctcgaggcatttt 212 |||||||||||||||||| | || || |||||||||| ||||||||||| ||||||| Sbjct: 15893 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 15834 Query: 213 ctctaccccttcttaccctgaaaaagcagggtcacct 249 ||||||||||||||||||||||||||||||||||||| Sbjct: 15833 ctctaccccttcttaccctgaaaaagcagggtcacct 15797
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 133 bits (67), Expect = 4e-28 Identities = 108/122 (88%), Gaps = 11/122 (9%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1304 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 1245 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 ||||||||| ||||||||||||| ||| ||||||||||||||||| ||||| Sbjct: 1244 cgttcgagc-------gggagtatggcatgggt----tacttcagcgccgtagcacctgg 1196 Query: 121 ta 122 || Sbjct: 1195 ta 1194 Score = 129 bits (65), Expect = 7e-27 Identities = 93/105 (88%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 1183 ggctcggggcattttctctaccccttcttaccctgaaaaagcaggggcaccttgcgtcct 1124 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 1123 tgaaccgataaccatctttcggctaacctagcctcctccgtccct 1079
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 129 bits (65), Expect = 7e-27 Identities = 105/118 (88%), Gaps = 4/118 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 145596 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccacttgtcaaaggt 145537 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 118 |||||||||||||| ||||||| |||||| ||| |||||| |||||||||||||| Sbjct: 145536 cgttcgagcttttcttgggagtgtggcatgggt----tacttcggcgccgtagcgcct 145483 Score = 129 bits (65), Expect = 7e-27 Identities = 105/118 (88%), Gaps = 4/118 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 87255 ggtattctctacctacccacctgtgtcggtttcgggtacaggtacccacttgtcaaaggt 87314 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 118 |||||||||||||| ||||||| |||||| ||| |||||| |||||||||||||| Sbjct: 87315 cgttcgagcttttcttgggagtgtggcatgggt----tacttcggcgccgtagcgcct 87368 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctacccct 222 ||||||||||||||||||||||||| Sbjct: 145468 ggctcgaggcattttctctacccct 145444 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctacccct 222 ||||||||||||||||||||||||| Sbjct: 87383 ggctcgaggcattttctctacccct 87407
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 129 bits (65), Expect = 7e-27 Identities = 109/122 (89%), Gaps = 5/122 (4%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttg-ttgaagg 59 ||||||||||||||| ||||||||||||||||| ||||||||| |||||||| || |||| Sbjct: 51003 ggtattctctacctacccacctgtgtcggtttcaggtacaggtgcccttttgtttaaagg 51062 Query: 60 tcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctg 119 ||||||||||||||| ||||||||||| | ||| |||||||||||||||||||||| Sbjct: 51063 ccgttcgagcttttcccgggagtatggcgtgggt----tacttcagcgccgtagcgcctg 51118 Query: 120 gt 121 || Sbjct: 51119 gt 51120 Score = 129 bits (65), Expect = 7e-27 Identities = 109/122 (89%), Gaps = 5/122 (4%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttg-ttgaagg 59 ||||||||||||||| ||||||||||||||||| ||||||||| |||||||| || |||| Sbjct: 38825 ggtattctctacctacccacctgtgtcggtttcaggtacaggtgcccttttgtttaaagg 38766 Query: 60 tcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctg 119 ||||||||||||||| ||||||||||| | ||| |||||||||||||||||||||| Sbjct: 38765 ccgttcgagcttttcccgggagtatggcgtgggt----tacttcagcgccgtagcgcctg 38710 Query: 120 gt 121 || Sbjct: 38709 gt 38708 Score = 77.8 bits (39), Expect = 2e-11 Identities = 91/109 (83%), Gaps = 4/109 (3%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctacccctt--cttaccctgaaaaagcagggtcacctnnngtc 255 |||||||||||||||||||||||||| |||||||||||||| ||||| ||| | || Sbjct: 51132 ggctcgaggcattttctctaccccttaacttaccctgaaaaaacaggggcactttacgtt 51191 Query: 256 cttaaacctataaccatctt--tnggctaacctancctnctncgtncct 302 ||| |||| ||||||||||| | |||||||||| ||| || ||| ||| Sbjct: 51192 cttgaaccgataaccatctttctcggctaacctagcctgctccgtccct 51240 Score = 77.8 bits (39), Expect = 2e-11 Identities = 91/109 (83%), Gaps = 4/109 (3%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctacccctt--cttaccctgaaaaagcagggtcacctnnngtc 255 |||||||||||||||||||||||||| |||||||||||||| ||||| ||| | || Sbjct: 38696 ggctcgaggcattttctctaccccttaacttaccctgaaaaaacaggggcactttacgtt 38637 Query: 256 cttaaacctataaccatctt--tnggctaacctancctnctncgtncct 302 ||| |||| ||||||||||| | |||||||||| ||| || ||| ||| Sbjct: 38636 cttgaaccgataaccatctttctcggctaacctagcctgctccgtccct 38588
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 129 bits (65), Expect = 7e-27 Identities = 109/122 (89%), Gaps = 5/122 (4%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttg-ttgaagg 59 ||||||||||||||| ||||||||||||||||| ||||||||| |||||||| || |||| Sbjct: 5753 ggtattctctacctacccacctgtgtcggtttcaggtacaggtgcccttttgtttaaagg 5694 Query: 60 tcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctg 119 ||||||||||||||| ||||||||||| | ||| |||||||||||||||||||||| Sbjct: 5693 ccgttcgagcttttcccgggagtatggcgtgggt----tacttcagcgccgtagcgcctg 5638 Query: 120 gt 121 || Sbjct: 5637 gt 5636 Score = 77.8 bits (39), Expect = 2e-11 Identities = 91/109 (83%), Gaps = 4/109 (3%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctacccctt--cttaccctgaaaaagcagggtcacctnnngtc 255 |||||||||||||||||||||||||| |||||||||||||| ||||| ||| | || Sbjct: 5624 ggctcgaggcattttctctaccccttaacttaccctgaaaaaacaggggcactttacgtt 5565 Query: 256 cttaaacctataaccatctt--tnggctaacctancctnctncgtncct 302 ||| |||| ||||||||||| | |||||||||| ||| || ||| ||| Sbjct: 5564 cttgaaccgataaccatctttctcggctaacctagcctgctccgtccct 5516
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 123 bits (62), Expect = 4e-25 Identities = 105/119 (88%), Gaps = 4/119 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||| ||||||||||||| | ||||||||| Sbjct: 137580 ggtattctctacctacccacctgtgtcggtttcaggtacaggtacccactcgttgaaggt 137639 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctg 119 |||||| ||||||| ||||||| |||||| || |||||||||||||||||||||| Sbjct: 137640 cgttcgggcttttcttgggagtgtggcatgagt----tacttcagcgccgtagcgcctg 137694 Score = 123 bits (62), Expect = 4e-25 Identities = 105/119 (88%), Gaps = 4/119 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| ||||||||||||||||| ||||||||||||| | ||||||||| Sbjct: 84297 ggtattctctacctacccacctgtgtcggtttcaggtacaggtacccactcgttgaaggt 84238 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctg 119 |||||| ||||||| ||||||| |||||| || |||||||||||||||||||||| Sbjct: 84237 cgttcgggcttttcttgggagtgtggcatgagt----tacttcagcgccgtagcgcctg 84183 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctacccc 221 ||||||||||||| |||||||||| Sbjct: 137708 ggctcgaggcattctctctacccc 137731 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctacccc 221 ||||||||||||| |||||||||| Sbjct: 84169 ggctcgaggcattctctctacccc 84146
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 121 bits (61), Expect = 2e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 114527 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgtttaaggt 114586 Query: 61 cgttcgagcttttcctgggagtatggcat 89 |||||||||||||| ||||||| |||||| Sbjct: 114587 cgttcgagcttttcttgggagtgtggcat 114615 Score = 121 bits (61), Expect = 2e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 87593 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgtttaaggt 87534 Query: 61 cgttcgagcttttcctgggagtatggcat 89 |||||||||||||| ||||||| |||||| Sbjct: 87533 cgttcgagcttttcttgggagtgtggcat 87505 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 254 tccttaaacctataaccatctttnggctaacctancct 291 ||||| |||| |||||||||||| |||||||||| ||| Sbjct: 114717 tccttgaaccgataaccatctttcggctaacctagcct 114754 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Minus Query: 254 tccttaaacctataaccatctttnggctaacctancct 291 ||||| |||| |||||||||||| |||||||||| ||| Sbjct: 87403 tccttgaaccgataaccatctttcggctaacctagcct 87366
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 121 bits (61), Expect = 2e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | ||||||||||||||||||||||||||||| | ||||||||| Sbjct: 144869 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccactcgttgaaggt 144928 Query: 61 cgttcgagcttttcctgggagtatggcat 89 |||||||||||||| ||||||| |||||| Sbjct: 144929 cgttcgagcttttcttgggagtgtggcat 144957 Score = 121 bits (61), Expect = 2e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | ||||||||||||||||||||||||||||| | ||||||||| Sbjct: 113593 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccactcgttgaaggt 113534 Query: 61 cgttcgagcttttcctgggagtatggcat 89 |||||||||||||| ||||||| |||||| Sbjct: 113533 cgttcgagcttttcttgggagtgtggcat 113505 Score = 56.0 bits (28), Expect = 8e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttacc 229 ||||| |||||||||||||||||||||||||| Sbjct: 144997 ggctcaaggcattttctctaccccttcttacc 145028 Score = 56.0 bits (28), Expect = 8e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttacc 229 ||||| |||||||||||||||||||||||||| Sbjct: 113465 ggctcaaggcattttctctaccccttcttacc 113434
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 121 bits (61), Expect = 2e-24 Identities = 107/122 (87%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 116464 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgttaaaggt 116523 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 |||||||||||||| ||| ||| |||||| | | ||||||||| ||||||||||||| Sbjct: 116524 cgttcgagcttttcttggaagtgtggcattgat----tacttcagcaccgtagcgcctgg 116579 Query: 121 ta 122 || Sbjct: 116580 ta 116581 Score = 121 bits (61), Expect = 2e-24 Identities = 107/122 (87%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 91638 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgttaaaggt 91579 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 |||||||||||||| ||| ||| |||||| | | ||||||||| ||||||||||||| Sbjct: 91578 cgttcgagcttttcttggaagtgtggcattgat----tacttcagcaccgtagcgcctgg 91523 Query: 121 ta 122 || Sbjct: 91522 ta 91521 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/43 (86%) Strand = Plus / Plus Query: 260 aacctataaccatctttnggctaacctancctnctncgtncct 302 |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 116659 aaccgataaccatctttcggctaacctagcctccttcgtccct 116701 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/43 (86%) Strand = Plus / Minus Query: 260 aacctataaccatctttnggctaacctancctnctncgtncct 302 |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 91443 aaccgataaccatctttcggctaacctagcctccttcgtccct 91401 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 198 ggctcgaggcattttctctaccccttcttacc 229 |||||| |||||||||||||||| || ||||| Sbjct: 116592 ggctcggggcattttctctacccttttttacc 116623 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttacc 229 |||||| |||||||||||||||| || ||||| Sbjct: 91510 ggctcggggcattttctctacccttttttacc 91479
>emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0070J16, complete sequence Length = 130718 Score = 119 bits (60), Expect = 6e-24 Identities = 81/89 (91%) Strand = Plus / Minus Query: 101 ttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggct 160 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 41597 ttcagcgccgtagcgcctggtacaagcctcgtggagaagcaatagctagtccacgaggct 41538 Query: 161 catacttcagngntgnagcgcttggtact 189 |||||||||| | | ||||||||||||| Sbjct: 41537 catacttcagcgccgcagcgcttggtact 41509
>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05, complete sequence Length = 158601 Score = 119 bits (60), Expect = 6e-24 Identities = 81/89 (91%) Strand = Plus / Minus Query: 101 ttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggct 160 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 148068 ttcagcgccgtagcgcctggtacaagcctcgtggagaagcaatagctagtccacgaggct 148009 Query: 161 catacttcagngntgnagcgcttggtact 189 |||||||||| | | ||||||||||||| Sbjct: 148008 catacttcagcgccgcagcgcttggtact 147980
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 115 bits (58), Expect = 1e-22 Identities = 107/123 (86%), Gaps = 4/123 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | |||||||||||||||||||||||||| || ||||| ||||| Sbjct: 5575 ggtattctctacctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggt 5516 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 |||||||||||||| ||||||| |||||| || ||||||||||||||||| ||| | Sbjct: 5515 cgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgccgtagcacctag 5460 Query: 121 tat 123 ||| Sbjct: 5459 tat 5457 Score = 61.9 bits (31), Expect = 1e-06 Identities = 44/50 (88%) Strand = Plus / Minus Query: 253 gtccttaaacctataaccatctttnggctaacctancctnctncgtncct 302 ||||||||||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 5390 gtccttaaaccgataaccatctttcggctaacctaaccttctccgtccct 5341
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 115 bits (58), Expect = 1e-22 Identities = 107/123 (86%), Gaps = 4/123 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | |||||||||||||||||||||||||| || ||||| ||||| Sbjct: 1685 ggtattctctacctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggt 1626 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 |||||||||||||| ||||||| |||||| || ||||||||||||||||| ||| | Sbjct: 1625 cgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgccgtagcacctag 1570 Query: 121 tat 123 ||| Sbjct: 1569 tat 1567 Score = 61.9 bits (31), Expect = 1e-06 Identities = 44/50 (88%) Strand = Plus / Minus Query: 253 gtccttaaacctataaccatctttnggctaacctancctnctncgtncct 302 ||||||||||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 1500 gtccttaaaccgataaccatctttcggctaacctaaccttctccgtccct 1451
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 115 bits (58), Expect = 1e-22 Identities = 107/123 (86%), Gaps = 4/123 (3%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | |||||||||||||||||||||||||| || ||||| ||||| Sbjct: 149560 ggtattctctacctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggt 149619 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 |||||||||||||| ||||||| |||||| || ||||||||||||||||| ||| | Sbjct: 149620 cgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgccgtagcacctag 149675 Query: 121 tat 123 ||| Sbjct: 149676 tat 149678 Score = 115 bits (58), Expect = 1e-22 Identities = 107/123 (86%), Gaps = 4/123 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | |||||||||||||||||||||||||| || ||||| ||||| Sbjct: 119106 ggtattctctacctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggt 119047 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 |||||||||||||| ||||||| |||||| || ||||||||||||||||| ||| | Sbjct: 119046 cgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgccgtagcacctag 118991 Query: 121 tat 123 ||| Sbjct: 118990 tat 118988 Score = 61.9 bits (31), Expect = 1e-06 Identities = 44/50 (88%) Strand = Plus / Plus Query: 253 gtccttaaacctataaccatctttnggctaacctancctnctncgtncct 302 ||||||||||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 149745 gtccttaaaccgataaccatctttcggctaacctaaccttctccgtccct 149794 Score = 61.9 bits (31), Expect = 1e-06 Identities = 44/50 (88%) Strand = Plus / Minus Query: 253 gtccttaaacctataaccatctttnggctaacctancctnctncgtncct 302 ||||||||||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 118921 gtccttaaaccgataaccatctttcggctaacctaaccttctccgtccct 118872
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 115 bits (58), Expect = 1e-22 Identities = 107/123 (86%), Gaps = 4/123 (3%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | |||||||||||||||||||||||||| || ||||| ||||| Sbjct: 1685 ggtattctctacctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggt 1626 Query: 61 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 120 |||||||||||||| ||||||| |||||| || ||||||||||||||||| ||| | Sbjct: 1625 cgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgccgtagcacctag 1570 Query: 121 tat 123 ||| Sbjct: 1569 tat 1567 Score = 61.9 bits (31), Expect = 1e-06 Identities = 44/50 (88%) Strand = Plus / Minus Query: 253 gtccttaaacctataaccatctttnggctaacctancctnctncgtncct 302 ||||||||||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 1500 gtccttaaaccgataaccatctttcggctaacctaaccttctccgtccct 1451
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 113 bits (57), Expect = 4e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | ||||||||||||||||||||||||||||| ||| | ||||| Sbjct: 1646 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgcttaaggt 1587 Query: 61 cgttcgagcttttcctgggagtatggcat 89 |||||||||||||| ||||||| |||||| Sbjct: 1586 cgttcgagcttttcttgggagtgtggcat 1558 Score = 54.0 bits (27), Expect = 3e-04 Identities = 43/50 (86%) Strand = Plus / Minus Query: 253 gtccttaaacctataaccatctttnggctaacctancctnctncgtncct 302 |||||| |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 1481 gtccttgaaccgataaccatctttcggctaacctagcctcctccgtccct 1432 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctacc 219 |||||||||||||||||||||| Sbjct: 1518 ggctcgaggcattttctctacc 1497
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 111 bits (56), Expect = 2e-21 Identities = 86/96 (89%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | ||||||||||||||||||||||||||||| ||||| | ||| Sbjct: 1685 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgttaatggt 1626 Query: 61 cgttcgagcttttcctgggagtatggcatcggttac 96 |||||||||||||| ||| ||| |||||| |||||| Sbjct: 1625 cgttcgagcttttcttggaagtgtggcattggttac 1590 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/43 (86%) Strand = Plus / Minus Query: 260 aacctataaccatctttnggctaacctancctnctncgtncct 302 |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 1490 aaccgataaccatctttcggctaacctagcctccttcgtccct 1448 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccc 220 ||||||||||||||||||||||| Sbjct: 1557 ggctcgaggcattttctctaccc 1535
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 105 bits (53), Expect = 1e-19 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 198 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacctnnngtcct 257 ||||||||| |||||||||||||||||||||||||||||| ||||| ||||| || || Sbjct: 1552 ggctcgaggtattttctctaccccttcttaccctgaaaaa-cagggacaccttacgttct 1494 Query: 258 taaacctataaccatctttnggctaacctancctnctncgtncct 302 | |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 1493 tgaaccgataaccatcttttggctaacctagcctgctccgtccct 1449 Score = 87.7 bits (44), Expect = 2e-14 Identities = 50/52 (96%) Strand = Plus / Minus Query: 3 tattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgtt 54 ||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 1691 tattctctacctacccacctgtgttggtttcgggtacaggtacccttttgtt 1640 Score = 65.9 bits (33), Expect = 8e-08 Identities = 58/66 (87%), Gaps = 4/66 (6%) Strand = Plus / Minus Query: 56 aaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcg 115 |||||| ||||||||||||||||||||||||| | ||| |||||||||||||||| | Sbjct: 1625 aaggtcattcgagcttttcctgggagtatggcgtgggt----tacttcagcgccgtagtg 1570 Query: 116 cctggt 121 |||||| Sbjct: 1569 cctggt 1564
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacccttttgttgaaggt 60 ||||||||||||||| | ||||||||||||||||||||||||||||| | | | ||||| Sbjct: 1691 ggtattctctacctacctacctgtgtcggtttcgggtacaggtacccactcgcttaaggt 1632 Query: 61 cgttcgagcttttcctgggagtatggcat 89 |||||||||||||| |||||| |||||| Sbjct: 1631 cgttcgagcttttctcgggagtgtggcat 1603 Score = 52.0 bits (26), Expect = 0.001 Identities = 42/49 (85%) Strand = Plus / Minus Query: 254 tccttaaacctataaccatctttnggctaacctancctnctncgtncct 302 ||||| |||| |||||||||||| |||||||||| ||| || ||| ||| Sbjct: 1500 tccttgaaccgataaccatctttcggctaacctagcctactccgtccct 1452
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 95.6 bits (48), Expect = 9e-17 Identities = 64/72 (88%) Strand = Plus / Plus Query: 231 tgaaaaagcagggtcacctnnngtccttaaacctataaccatctttnggctaacctancc 290 ||||||||||||||||||| |||||||||||||||||||||||| |||||||||| || Sbjct: 1 tgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcc 60 Query: 291 tnctncgtncct 302 | || ||| ||| Sbjct: 61 tcctccgtccct 72
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 81.8 bits (41), Expect = 1e-12 Identities = 44/45 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtac 45 ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1704 ggtattctctacctacccacctgtgtcggtttcgggtacaggtac 1660
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 81.8 bits (41), Expect = 1e-12 Identities = 44/45 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtac 45 ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1717 ggtattctctacctacccacctgtgtcggtttcgggtacaggtac 1673
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 ||||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 1665 ggtattctctacctacctacctgtgttggtttcgggtacaggtaccctttt 1615
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 75.8 bits (38), Expect = 9e-11 Identities = 44/46 (95%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtacc 46 ||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 1842 ggtattctcaacctacccacctgtgtcggtttcgggtacaggtacc 1797
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 73.8 bits (37), Expect = 3e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtac 45 ||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 1572 ggtattctctacctacccacctgtgtcggtttcaggtacaggtac 1528
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 71.9 bits (36), Expect = 1e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggta 44 ||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 2001 ggtattctctacctacccacctgtgtcggtttctggtacaggta 1958
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 71.9 bits (36), Expect = 1e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggta 44 ||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 1689 ggtattctctacctacctacctgtgtcggtttcgggtacaggta 1646
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 71.9 bits (36), Expect = 1e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggta 44 ||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 3458 ggtattctctacctacctacctgtgtcggtttcgggtacaggta 3415
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 69.9 bits (35), Expect = 5e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 ||||||||||||||| | |||||||| ||||| |||||||||||||||||| Sbjct: 1658 ggtattctctacctacctacctgtgttggttttgggtacaggtaccctttt 1608 Score = 46.1 bits (23), Expect = 0.077 Identities = 26/27 (96%) Strand = Plus / Minus Query: 63 ttcgagcttttcctgggagtatggcat 89 |||||||||||||||||||||| |||| Sbjct: 1588 ttcgagcttttcctgggagtatagcat 1562 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gctcgaggcattttctctaccccttc 224 ||||||||||||||||||||| |||| Sbjct: 1534 gctcgaggcattttctctacctcttc 1509 Score = 44.1 bits (22), Expect = 0.31 Identities = 41/49 (83%) Strand = Plus / Minus Query: 254 tccttaaacctataaccatctttnggctaacctancctnctncgtncct 302 ||||| ||||||||||||| ||| || ||||||| ||| || ||| ||| Sbjct: 1497 tcctttaacctataaccatattttggttaacctagcctactccgtccct 1449
>gb|AY264666.1| Arsenophonus endosymbiont of Aleyrodes elevatus 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4613 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtaca 40 ||||||||||||||||||||||||||||||| ||||||| Sbjct: 3695 gtattctctacctaaccacctgtgtcggtttggggtaca 3657
>gb|AF476108.1| Secondary endosymbiont of Planococcus ficus 16S ribosomal RNA and 23S ribosomal RNA genes, partial sequence Length = 4513 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||||||||||||||||||||| |||||| Sbjct: 3594 ggtattctctacctaaccacctgtgtcggttttgggtac 3556
>gb|AF476107.1| Secondary endosymbiont of Planococcus citri 16S ribosomal RNA and 23S ribosomal RNA genes, partial sequence Length = 4590 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||||||||||||||||||||| |||||| Sbjct: 3669 ggtattctctacctaaccacctgtgtcggttttgggtac 3631
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 69.9 bits (35), Expect = 5e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 ||||||||||||||| ||||||||||||||||| |||| | |||||||||| Sbjct: 1740 ggtattctctacctacccacctgtgtcggtttctggtaaaagtaccctttt 1690
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||||||||||||||||||||| |||||| Sbjct: 5000015 ggtattctctacctaaccacctgtgtcggtttggggtac 5000053 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||||||||||||||||||||| |||||| Sbjct: 3797026 ggtattctctacctaaccacctgtgtcggtttggggtac 3797064 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||||||||||||||||||||| |||||| Sbjct: 2742962 ggtattctctacctaaccacctgtgtcggtttggggtac 2742924 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||||||||||||||||||||| |||||| Sbjct: 1379194 ggtattctctacctaaccacctgtgtcggtttggggtac 1379156 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||||||||||||||||||||| |||||| Sbjct: 700149 ggtattctctacctaaccacctgtgtcggtttggggtac 700111 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||||||||||||||||||||| |||||| Sbjct: 493681 ggtattctctacctaaccacctgtgtcggtttggggtac 493643 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||||||||||||||||||||| |||||| Sbjct: 119140 ggtattctctacctaaccacctgtgtcggtttggggtac 119102
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||||||||||||||||||||| |||||| Sbjct: 5308957 ggtattctctacctaaccacctgtgtcggtttggggtac 5308995 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||||||||||||||||||||| |||||| Sbjct: 2552344 ggtattctctacctaaccacctgtgtcggtttggggtac 2552306 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||||||||||||||||||||| |||||| Sbjct: 1328945 ggtattctctacctaaccacctgtgtcggtttggggtac 1328907 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||||||||||||||||||||| |||||| Sbjct: 701479 ggtattctctacctaaccacctgtgtcggtttggggtac 701441 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||||||||||||||||||||| |||||| Sbjct: 528391 ggtattctctacctaaccacctgtgtcggtttggggtac 528353 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||||||||||||||||||||| |||||| Sbjct: 180261 ggtattctctacctaaccacctgtgtcggtttggggtac 180223 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||||||||||||||||||||| |||||| Sbjct: 174831 ggtattctctacctaaccacctgtgtcggtttggggtac 174793
>gb|U77924.1|SEU77924 Salmonella enterica IIIa 51:z4,z23:- 23S ribosomal RNA (rrl) gene, complete sequence Length = 2906 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| |||||||||||||||||||||||| Sbjct: 1641 ggtattctctacctgaccacctgtgtcggtttcgggtac 1603
>gb|U77923.1|SEU77923 Salmonella enterica IIIa 23S ribosomal RNA (rrl) gene, complete sequence Length = 2906 Score = 69.9 bits (35), Expect = 5e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| |||||||||||||||||||||||| Sbjct: 1641 ggtattctctacctgaccacctgtgtcggtttcgggtac 1603
>gb|AY587142.1| Arsenophonus endosymbiont of Aleurodicus dugesii 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4587 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 3668 gtattctctacctaaccacctgtgtcggtttggggtac 3631
>gb|AY587141.1| Arsenophonus endosymbiont of Aleyrodes proletella 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4599 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 3681 gtattctctacctaaccacctgtgtcggtttggggtac 3644
>gb|AY587140.1| Arsenophonus endosymbiont of Trialeurodes hutchingsi 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4611 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 3688 gtattctctacctaaccacctgtgtcggtttggggtac 3651
>gb|AY264677.1| Arsenophonus endosymbiont of Bemisia sp. 16S ribosomal RNA and 23S ribosomal RNA genes, partial sequence Length = 4496 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 3575 gtattctctacctaaccacctgtgtcggtttggggtac 3538
>gb|AY264674.1| Arsenophonus nasoniae 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4861 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 3943 gtattctctacctaaccacctgtgtcggtttggggtac 3906
>gb|AY264673.1| Arsenophonus endosymbiont of Australiococcus greville 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4606 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 3688 gtattctctacctaaccacctgtgtcggtttggggtac 3651
>gb|AY264671.1| Arsenophonus endosymbiont of Tetraleurodes mori 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4617 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 3699 gtattctctacctaaccacctgtgtcggtttggggtac 3662
>gb|AY264670.1| Arsenophonus endosymbiont of Tetraleurodes acaciae 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4692 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 3774 gtattctctacctaaccacctgtgtcggtttggggtac 3737
>gb|AY264669.1| Arsenophonus endosymbiont of Siphoninus phillyreae 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4860 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 3942 gtattctctacctaaccacctgtgtcggtttggggtac 3905
>gb|AY264668.1| Arsenophonus endosymbiont of Neomaskellia andropogonis 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4607 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 3689 gtattctctacctaaccacctgtgtcggtttggggtac 3652
>gb|AY264667.1| Arsenophonus endosymbiont of Dialeurodes hongkongensis 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4607 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 3689 gtattctctacctaaccacctgtgtcggtttggggtac 3652
>gb|AY264665.1| Arsenophonus endosymbiont of Aleuroplatus gelatinosus 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4779 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 3860 gtattctctacctaaccacctgtgtcggtttggggtac 3823
>gb|AY264664.1| Arsenophonus endosymbiont of Aleurodicus dispersus 16S ribosomal RNA gene, partial sequence; tRNA-Ala gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4703 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 3785 gtattctctacctaaccacctgtgtcggtttggggtac 3748
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 4076280 gtattctctacctaaccacctgtgtcggtttggggtac 4076317 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 1660236 gtattctctacctaaccacctgtgtcggtttggggtac 1660199 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 564257 gtattctctacctaaccacctgtgtcggtttggggtac 564220 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 558416 gtattctctacctaaccacctgtgtcggtttggggtac 558379 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 360557 gtattctctacctaaccacctgtgtcggtttggggtac 360520 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 354706 gtattctctacctaaccacctgtgtcggtttggggtac 354669 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 53953 gtattctctacctaaccacctgtgtcggtttggggtac 53916 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 48109 gtattctctacctaaccacctgtgtcggtttggggtac 48072 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 38705 gtattctctacctaaccacctgtgtcggtttggggtac 38668
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtacaggt 43 |||||||||||||| | ||||||||||||||||||||||||| Sbjct: 1690 gtattctctacctacctacctgtgtcggtttcgggtacaggt 1649
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtacaggt 43 |||||||||||||| | ||||||||||||||||||||||||| Sbjct: 193520 gtattctctacctacctacctgtgtcggtttcgggtacaggt 193479 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtacaggt 43 |||||||||||||| | ||||||||||||||||||||||||| Sbjct: 143262 gtattctctacctacctacctgtgtcggtttcgggtacaggt 143303
>gb|L42837.1|CMKCPRGOL Chamaetrichon capsulatum large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2610 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtacaggt 43 |||||||||||||| | ||||||||||||||||||||||||| Sbjct: 1649 gtattctctacctacctacctgtgtcggtttcgggtacaggt 1608
>gb|AF263562.1| Secondary endosymbiont of Heteropsylla texana 16S ribosomal RNA gene, partial sequence; intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4572 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 3654 gtattctctacctaaccacctgtgtcggtttggggtac 3617
>gb|AF263561.1| Secondary endosymbiont of Glycaspis brimblecombei 23S rRNA pseudouridine synthase (rluD) gene, partial cds; hypothetical protein YfiH (yfiH) and ClpB protease (clpB) genes, complete cds; 16S ribosomal RNA gene, complete sequence; intergenic spacer, complete sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 9906 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 8641 gtattctctacctaaccacctgtgtcggtttggggtac 8604
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacagg 42 ||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 1642 ggtattctctacctacccacctgtgtcggttttgggtacagg 1601
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacagg 42 ||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 4676 ggtattctctacctacccacctgtgtcggttttgggtacagg 4635
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacagg 42 ||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 1642 ggtattctctacctacccacctgtgtcggttttgggtacagg 1601
>dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA, complete sequence Length = 640681 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||||||||||| |||||| Sbjct: 540807 gtattctctacctaaccacctgtgtcggtttggggtac 540844
>gb|AY744382.1| Buchnera aphidicola (Cinara cedri) genomic sequence Length = 28688 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtac 39 |||| ||||||||||||||||||||||||||||||||| Sbjct: 937 gtatactctacctaaccacctgtgtcggtttcgggtac 974
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 65.9 bits (33), Expect = 8e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtac 45 ||||| ||||||||| | ||||||||||||||||||||||||||| Sbjct: 1646 ggtatactctacctacctacctgtgtcggtttcgggtacaggtac 1602
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 65.9 bits (33), Expect = 8e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtac 45 ||||| ||||||||| | ||||||||||||||||||||||||||| Sbjct: 114017 ggtatactctacctacctacctgtgtcggtttcgggtacaggtac 114061 Score = 65.9 bits (33), Expect = 8e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtac 45 ||||| ||||||||| | ||||||||||||||||||||||||||| Sbjct: 87971 ggtatactctacctacctacctgtgtcggtttcgggtacaggtac 87927
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 4230643 ggtattctctacctgaccacctgtgtcggtttggggtac 4230605 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 4190205 ggtattctctacctgaccacctgtgtcggtttggggtac 4190167 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 4052016 ggtattctctacctgaccacctgtgtcggtttggggtac 4051978 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 3954825 ggtattctctacctgaccacctgtgtcggtttggggtac 3954787 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 3408022 ggtattctctacctgaccacctgtgtcggtttggggtac 3408060 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 2724589 ggtattctctacctgaccacctgtgtcggtttggggtac 2724627 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 218652 ggtattctctacctgaccacctgtgtcggtttggggtac 218614
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 61.9 bits (31), Expect = 1e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggt 43 |||||||||||| || | ||||||||||||||||||||||||| Sbjct: 169801 ggtattctctacttacctacctgtgtcggtttcgggtacaggt 169843 Score = 61.9 bits (31), Expect = 1e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggt 43 |||||||||||| || | ||||||||||||||||||||||||| Sbjct: 123125 ggtattctctacttacctacctgtgtcggtttcgggtacaggt 123083
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 5727887 ggtattctctacccaaccacctgtgtcggtttggggtac 5727925 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 5394615 ggtattctctacccaaccacctgtgtcggtttggggtac 5394653 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 4418058 ggtattctctacccaaccacctgtgtcggtttggggtac 4418096 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 2553203 ggtattctctacccaaccacctgtgtcggtttggggtac 2553165 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 806701 ggtattctctacccaaccacctgtgtcggtttggggtac 806663 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 125140 ggtattctctacccaaccacctgtgtcggtttggggtac 125102
>gb|AY033325.1| Uncultured alpha proteobacteria MB13F01 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3663 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||||||||| Sbjct: 3397 ggtattctctacctgcccacctgtgtcggtttcgggtac 3359
>gb|DQ499016.1| Clavibacter michiganensis subsp. tessellarius 23S ribosomal RNA gene, partial sequence Length = 2627 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| |||||||| ||||||||||||||| Sbjct: 1712 ggtattctctacctgaccacctgagtcggtttcgggtac 1674
>gb|AY116931.1| Klebsiella pneumoniae strain ATCC 15830 23S ribosomal RNA gene, partial sequence Length = 2485 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 1633 ggtattctctacctgaccacctgtgtcggtttggggtac 1595
>gb|AE009348.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 118 of 187 of the complete sequence Length = 10029 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 4946 ggtatactctacctgaccacctgtgtcggtttcgggtac 4908
>gb|AE009325.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 95 of 187 of the complete sequence Length = 11704 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 2682 ggtatactctacctgaccacctgtgtcggtttcgggtac 2644
>gb|AE009200.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 226 of 256 of the complete sequence Length = 10654 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 9182 ggtatactctacctgaccacctgtgtcggtttcgggtac 9220
>gb|AE008980.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 6 of 256 of the complete sequence Length = 10029 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 4740 ggtatactctacctgaccacctgtgtcggtttcgggtac 4702
>gb|AE008290.2| Agrobacterium tumefaciens str. C58 linear chromosome, section 94 of 187 of the complete sequence Length = 13627 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 978 ggtatactctacctgaccacctgtgtcggtttcgggtac 1016
>gb|AE008265.2| Agrobacterium tumefaciens str. C58 linear chromosome, section 69 of 187 of the complete sequence Length = 11527 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 7171 ggtatactctacctgaccacctgtgtcggtttcgggtac 7209
>gb|U65012.1|PSU65012 Pseudomonas stutzeri 16S rRNA, 23S rRNA, 5S rRNA, tRNA-Ile, and tRNA-Ala genes, complete sequences Length = 5785 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 4142 ggtattctctacccaaccacctgtgtcggtttggggtac 4104
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 6215447 ggtattctctacccaaccacctgtgtcggtttggggtac 6215485 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 3870976 ggtattctctacccaaccacctgtgtcggtttggggtac 3871014 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 1075784 ggtattctctacccaaccacctgtgtcggtttggggtac 1075746 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 831247 ggtattctctacccaaccacctgtgtcggtttggggtac 831209 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 670433 ggtattctctacccaaccacctgtgtcggtttggggtac 670395
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 5949484 ggtattctctacccaaccacctgtgtcggtttggggtac 5949522 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 5424562 ggtattctctacccaaccacctgtgtcggtttggggtac 5424600 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 3848975 ggtattctctacccaaccacctgtgtcggtttggggtac 3849013 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 968404 ggtattctctacccaaccacctgtgtcggtttggggtac 968366 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 775814 ggtattctctacccaaccacctgtgtcggtttggggtac 775776
>gb|AY033324.1| Uncultured alpha proteobacterium MB11C09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4073 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||| |||||||||||||||| |||||| Sbjct: 3806 ggtattctctacctatccacctgtgtcggtttagggtac 3768
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||||||||| Sbjct: 1182 ggtattctctacctccccacctgtgtcggtttcgggtac 1144
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 |||||||||||||| | |||||||| |||||| ||||||||||||||||| Sbjct: 1609 ggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 |||||||||||||| | |||||||| |||||| ||||||||||||||||| Sbjct: 1608 ggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1558
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 ||||||||||||||| | || ||||| ||||||||||| |||||||||||| Sbjct: 1633 ggtattctctacctacctacttgtgttggtttcgggtataggtaccctttt 1583 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 ttcgagcttttcctgggagtat 84 |||||||||||||||||||||| Sbjct: 1572 ttcgagcttttcctgggagtat 1551 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 ctcgaggcattttctctaccccttc 224 |||||||||||||||||||| |||| Sbjct: 1518 ctcgaggcattttctctacctcttc 1494
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 |||||||||||||| | |||||||| |||||| ||||||||||||||||| Sbjct: 1609 ggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 |||||||||||||| | |||||||| |||||| ||||||||||||||||| Sbjct: 1609 ggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 |||||||||||||| | |||||||| |||||| ||||||||||||||||| Sbjct: 1609 ggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 |||||||||||||| | |||||||| |||||| ||||||||||||||||| Sbjct: 1609 ggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 |||||||||||||| | |||||||| |||||| ||||||||||||||||| Sbjct: 1608 ggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1558
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 |||||||||||||| | |||||||| |||||| ||||||||||||||||| Sbjct: 1609 ggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 |||||||||||||| | |||||||| |||||| ||||||||||||||||| Sbjct: 1609 ggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 |||||||||||||| | |||||||| |||||| ||||||||||||||||| Sbjct: 1608 ggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1558
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 |||||||||||||| | |||||||| |||||| ||||||||||||||||| Sbjct: 1609 ggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 |||||||||||||| | |||||||| |||||| ||||||||||||||||| Sbjct: 1609 ggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 |||||||||||||| | |||||||| |||||| ||||||||||||||||| Sbjct: 1609 ggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 |||||||||||||| | |||||||| |||||| ||||||||||||||||| Sbjct: 1608 ggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1558
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggtaccctttt 51 |||||||||||||| | |||||||| |||||| ||||||||||||||||| Sbjct: 1609 ggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 5780650 ggtattctctacccaaccacctgtgtcggtttggggtac 5780688 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 5248521 ggtattctctacccaaccacctgtgtcggtttggggtac 5248559 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 3632980 ggtattctctacccaaccacctgtgtcggtttggggtac 3633018 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 1052450 ggtattctctacccaaccacctgtgtcggtttggggtac 1052412 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 807715 ggtattctctacccaaccacctgtgtcggtttggggtac 807677
>gb|AY316688.1| Reichenowia pictae 23S large subunit ribosomal RNA gene, partial sequence Length = 483 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 463 ggtatactctacctgaccacctgtgtcggtttcgggtac 425
>gb|AY316687.1| Reichenowia ornatae 23S large subunit ribosomal RNA gene, partial sequence Length = 521 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 494 ggtatactctacctgaccacctgtgtcggtttcgggtac 456
>gb|AY316686.1| Reichenowia parasiticae 23S large subunit ribosomal RNA gene, partial sequence Length = 482 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 461 ggtatactctacctgaccacctgtgtcggtttcgggtac 423
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 163466 ggtatactctacctgaccacctgtgtcggtttcgggtac 163504
>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12 Length = 340900 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 101462 ggtatactctacctgaccacctgtgtcggtttcgggtac 101500
>gb|AF548141.1| Primary endosymbiont of Sitophilus zeamais 16S-23S ribosomal RNA (rrnC) operon, complete sequence Length = 4905 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 3987 ggtattctctacctgaccacctgtgtcggtttggggtac 3949
>gb|AF548140.1| Primary endosymbiont of Sitophilus zeamais 16S-23S ribosomal RNA (rrnB) operon, complete sequence Length = 4907 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 3989 ggtattctctacctgaccacctgtgtcggtttggggtac 3951
>gb|AF548139.1| Primary endosymbiont of Sitophilus oryzae 16S-23S ribosomal RNA (rrnC) operon, complete sequence Length = 4910 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 3992 ggtattctctacctgaccacctgtgtcggtttggggtac 3954
>gb|AF548138.1| Primary endosymbiont of Sitophilus oryzae 16S-23S ribosomal RNA (rrnB) operon, complete sequence Length = 4912 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 3994 ggtattctctacctgaccacctgtgtcggtttggggtac 3956
>gb|AF548137.1| Primary endosymbiont of Sitophilus oryzae 16S-23S ribosomal RNA (rrnA) operon, complete sequence Length = 4741 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 3823 ggtattctctacctgaccacctgtgtcggtttggggtac 3785
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 4742863 ggtattctctacctgaccacctgtgtcggtttggggtac 4742825 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 4702692 ggtattctctacctgaccacctgtgtcggtttggggtac 4702654 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 4564814 ggtattctctacctgaccacctgtgtcggtttggggtac 4564776 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 4446376 ggtattctctacctgaccacctgtgtcggtttggggtac 4446338 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 3856502 ggtattctctacctgaccacctgtgtcggtttggggtac 3856540 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 2990239 ggtattctctacctgaccacctgtgtcggtttggggtac 2990277 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 238798 ggtattctctacctgaccacctgtgtcggtttggggtac 238760
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 4459899 ggtattctctacctgaccacctgtgtcggtttggggtac 4459861 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 4325482 ggtattctctacctgaccacctgtgtcggtttggggtac 4325444 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 4206208 ggtattctctacctgaccacctgtgtcggtttggggtac 4206170 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 3694669 ggtattctctacctgaccacctgtgtcggtttggggtac 3694707 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 3642940 ggtattctctacctgaccacctgtgtcggtttggggtac 3642978 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 2871826 ggtattctctacctgaccacctgtgtcggtttggggtac 2871864 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 232139 ggtattctctacctgaccacctgtgtcggtttggggtac 232101
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 4209704 ggtattctctacctgaccacctgtgtcggtttggggtac 4209666 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 4168302 ggtattctctacctgaccacctgtgtcggtttggggtac 4168264 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 4037179 ggtattctctacctgaccacctgtgtcggtttggggtac 4037141 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 3943365 ggtattctctacctgaccacctgtgtcggtttggggtac 3943327 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 3423167 ggtattctctacctgaccacctgtgtcggtttggggtac 3423205 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 2725568 ggtattctctacctgaccacctgtgtcggtttggggtac 2725606 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 227397 ggtattctctacctgaccacctgtgtcggtttggggtac 227359
>gb|U00006.1|ECOUW89 E. coli chromosomal region from 89.2 to 92.8 minutes Length = 176195 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 76923 ggtattctctacctgaccacctgtgtcggtttggggtac 76885 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 35521 ggtattctctacctgaccacctgtgtcggtttggggtac 35483
>gb|AE008895.1| Salmonella typhimurium LT2, section 199 of 220 of the complete genome Length = 25597 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 11758 ggtattctctacctgaccacctgtgtcggtttggggtac 11720
>gb|AE008893.1| Salmonella typhimurium LT2, section 197 of 220 of the complete genome Length = 20178 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 12042 ggtattctctacctgaccacctgtgtcggtttggggtac 12004
>gb|AE008886.1| Salmonella typhimurium LT2, section 190 of 220 of the complete genome Length = 21018 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 11834 ggtattctctacctgaccacctgtgtcggtttggggtac 11796
>gb|AE008881.1| Salmonella typhimurium LT2, section 185 of 220 of the complete genome Length = 21570 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 19802 ggtattctctacctgaccacctgtgtcggtttggggtac 19764
>gb|AE008856.1| Salmonella typhimurium LT2, section 160 of 220 of the complete genome Length = 20382 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 18510 ggtattctctacctgaccacctgtgtcggtttggggtac 18548
>gb|AE008820.1| Salmonella typhimurium LT2, section 124 of 220 of the complete genome Length = 21722 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 17827 ggtattctctacctgaccacctgtgtcggtttggggtac 17865
>gb|AE008706.1| Salmonella typhimurium LT2, section 14 of 220 of the complete genome Length = 21381 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 13085 ggtattctctacctgaccacctgtgtcggtttggggtac 13047
>emb|BX251412.1| Tropheryma whipplei TW08/27, complete genome; segment 3/3 Length = 302938 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||||||||||||| |||||||| |||||| Sbjct: 55152 ggtattctctacctaaccacctgagtcggtttggggtac 55190
>emb|AL627278.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 14/20 Length = 258050 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 213805 ggtattctctacctgaccacctgtgtcggtttggggtac 213843
>emb|AL627276.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 12/20 Length = 274050 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 11743 ggtattctctacctgaccacctgtgtcggtttggggtac 11781
>emb|AL627282.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 18/20 Length = 234050 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 23128 ggtattctctacctgaccacctgtgtcggtttggggtac 23090
>emb|AL627280.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 16/20 Length = 245050 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 17272 ggtattctctacctgaccacctgtgtcggtttggggtac 17310
>emb|AL627279.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 15/20 Length = 264050 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 132271 ggtattctctacctgaccacctgtgtcggtttggggtac 132309 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 90216 ggtattctctacctgaccacctgtgtcggtttggggtac 90254
>emb|AL627266.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 2/20 Length = 268050 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 40115 ggtattctctacctgaccacctgtgtcggtttggggtac 40077
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 61.9 bits (31), Expect = 1e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtacaggta 44 ||||||||||| || |||||||||||||||| ||||||||||| Sbjct: 17408 gtattctctacttacccacctgtgtcggtttagggtacaggta 17450 Score = 61.9 bits (31), Expect = 1e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtacaggta 44 ||||||||||| || |||||||||||||||| ||||||||||| Sbjct: 3458 gtattctctacttacccacctgtgtcggtttagggtacaggta 3416
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 6384266 ggtattctctacccaaccacctgtgtcggtttggggtac 6384304 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 6010446 ggtattctctacccaaccacctgtgtcggtttggggtac 6010484 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 4811494 ggtattctctacccaaccacctgtgtcggtttggggtac 4811532 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 857739 ggtattctctacccaaccacctgtgtcggtttggggtac 857701 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||| |||||| Sbjct: 126498 ggtattctctacccaaccacctgtgtcggtttggggtac 126460
>gb|L19201.1|ECOUW87 E. coli chromosomal region from 87.2 to 89.2 minutes Length = 96484 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 796 ggtattctctacctgaccacctgtgtcggtttggggtac 758
>gb|AF476106.1| Secondary endosymbiont of Melanococcus albizziae 16S ribosomal RNA and 23S ribosomal RNA genes, partial sequence Length = 4509 Score = 61.9 bits (31), Expect = 1e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggttt 32 ||||||||||||||||||||||||||||||| Sbjct: 3588 gtattctctacctaaccacctgtgtcggttt 3558
>gb|AF476099.1| Secondary endosymbiont of Australicoccus grevilleae 16S ribosomal RNA and 23S ribosomal RNA genes, partial sequence Length = 4450 Score = 61.9 bits (31), Expect = 1e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggttt 32 ||||||||||||||||||||||||||||||| Sbjct: 3529 gtattctctacctaaccacctgtgtcggttt 3499
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 4215271 ggtattctctacctgaccacctgtgtcggtttggggtac 4215233 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 3691339 ggtattctctacctgaccacctgtgtcggtttggggtac 3691377 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 3597525 ggtattctctacctgaccacctgtgtcggtttggggtac 3597563 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 3466402 ggtattctctacctgaccacctgtgtcggtttggggtac 3466440 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 3425000 ggtattctctacctgaccacctgtgtcggtttggggtac 3425038 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 2726202 ggtattctctacctgaccacctgtgtcggtttggggtac 2726240 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 227397 ggtattctctacctgaccacctgtgtcggtttggggtac 227359
>emb|X06765.1|RARRN23S Ruminobacter amylophilus 23S rRNA Length = 2867 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||||||||||| |||||||||||||||||||||||| Sbjct: 1610 ggtattctctacccgaccacctgtgtcggtttcgggtac 1572
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 61.9 bits (31), Expect = 1e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtacaggta 44 |||| ||||||||| |||||||||||||||| ||||||||||| Sbjct: 138160 gtatactctacctacccacctgtgtcggtttagggtacaggta 138118 Score = 61.9 bits (31), Expect = 1e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 2 gtattctctacctaaccacctgtgtcggtttcgggtacaggta 44 |||| ||||||||| |||||||||||||||| ||||||||||| Sbjct: 47384 gtatactctacctacccacctgtgtcggtttagggtacaggta 47426
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 3970521 ggtatactctacctgaccacctgtgtcggtttcgggtac 3970559 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 3573560 ggtatactctacctgaccacctgtgtcggtttcgggtac 3573598 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 66866 ggtatactctacctgaccacctgtgtcggtttcgggtac 66828
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 2514049 ggtatactctacctgaccacctgtgtcggtttcgggtac 2514087 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 60917 ggtatactctacctgaccacctgtgtcggtttcgggtac 60879
>gb|U47356.1|RLU47356 Rhizobium leguminosarum bv. phaseoli 23S ribosomal RNA gene, partial sequence Length = 674 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 410 ggtatactctacctgaccacctgtgtcggtttcgggtac 372
>gb|U47355.1|RMU47355 Rhizobium meliloti 23S ribosomal RNA gene, partial sequence Length = 674 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 409 ggtatactctacctgaccacctgtgtcggtttcgggtac 371
>gb|U47354.1|RLU47354 Rhizobium leguminosarum bv. trifolii 23S ribosomal RNA gene, partial sequence Length = 673 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 409 ggtatactctacctgaccacctgtgtcggtttcgggtac 371
>gb|U47353.1|RLU47353 Rhizobium leguminosarum bv. trifolii 23S ribosomal RNA gene, partial sequence Length = 673 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 409 ggtatactctacctgaccacctgtgtcggtttcgggtac 371
>gb|U47352.1|RLU47352 Rhizobium leguminosarum bv. trifolii 23S ribosomal RNA gene, partial sequence Length = 673 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 409 ggtatactctacctgaccacctgtgtcggtttcgggtac 371
>gb|U47349.1|RMU47349 Rhizobium meliloti 23S ribosomal RNA gene, partial sequence Length = 674 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 409 ggtatactctacctgaccacctgtgtcggtttcgggtac 371
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 2860241 ggtatactctacctgaccacctgtgtcggtttcgggtac 2860279 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 2854508 ggtatactctacctgaccacctgtgtcggtttcgggtac 2854546 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 2848775 ggtatactctacctgaccacctgtgtcggtttcgggtac 2848813
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 4367204 ggtattctctacctgaccacctgtgtcggtttagggtac 4367242 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtac 39 |||||||||||||| ||||||||||||||||| |||||| Sbjct: 3749374 ggtattctctacctgaccacctgtgtcggtttagggtac 3749412
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 61.9 bits (31), Expect = 1e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggt 43 ||||||||||||||| | |||||||||||||| |||||||||| Sbjct: 1620 ggtattctctacctacctacctgtgtcggtttagggtacaggt 1578
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 61.9 bits (31), Expect = 1e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 1 ggtattctctacctaaccacctgtgtcggtttcgggtacaggt 43 |||||||||||| || | ||||||||||||||||||||||||| Sbjct: 1716 ggtattctctacttacctacctgtgtcggtttcgggtacaggt 1674 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,440,838 Number of Sequences: 3902068 Number of extensions: 1440838 Number of successful extensions: 24937 Number of sequences better than 10.0: 994 Number of HSP's better than 10.0 without gapping: 1018 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 22173 Number of HSP's gapped (non-prelim): 2579 length of query: 359 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 337 effective length of database: 17,147,199,772 effective search space: 5778606323164 effective search space used: 5778606323164 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
