Clone Name | rbasd23o22 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | EXEC1_ARATH (Q93YW0) EXECUTER1 protein, chloroplast precursor | 109 | 9e-24 | 2 | HSC90_DICDI (P54651) Heat shock cognate 90 kDa protein | 30 | 6.6 | 3 | SUWA_DROME (P12297) Protein suppressor of white apricot | 30 | 6.6 |
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>EXEC1_ARATH (Q93YW0) EXECUTER1 protein, chloroplast precursor| Length = 684 Score = 109 bits (272), Expect = 9e-24 Identities = 52/92 (56%), Positives = 67/92 (72%) Frame = -2 Query: 648 VPAGQVTFRAKVAKGSRLENRGAYPEEFGVTASYKGQGRIAQPGFKNPRWVDGELLVLNG 469 VPAG+V FRAK+ + L ++G PEEFGV A YKGQGR+A PGF+NPRWVDGEL++L+G Sbjct: 594 VPAGKVAFRAKIGRRYELPHKGLIPEEFGVIARYKGQGRLADPGFRNPRWVDGELVILDG 653 Query: 468 KSAIPHIGGAELGFLYSVPEQSFLVLFDRLTL 373 K GG +GF+Y PE F++ F+RL L Sbjct: 654 KYV---KGGPVVGFVYWAPEYHFVMFFNRLRL 682
>HSC90_DICDI (P54651) Heat shock cognate 90 kDa protein| Length = 700 Score = 30.0 bits (66), Expect = 6.6 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = +1 Query: 508 VFESRLRYSPLTFITSSHTKLFWVCTT--ILKTTALRNLSTESYLSSRDT 651 V +RL SP +TS + W I+K ALR+ S SY+SS+ T Sbjct: 555 VLSTRLANSPCVLVTSEYG---WSANMERIMKAQALRDSSMSSYMSSKKT 601
>SUWA_DROME (P12297) Protein suppressor of white apricot| Length = 963 Score = 30.0 bits (66), Expect = 6.6 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%) Frame = +2 Query: 326 THERTSSYQRDLAHSGSV---RRSKRTRKLCSGTLYRKPSSAPP 448 TH R+ S +++ S S R S R R+ S L R+PSS PP Sbjct: 837 THRRSRSRSKNVRSSDSSPSSRESSRRRRQKSSRLSREPSSNPP 880 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,977,845 Number of Sequences: 219361 Number of extensions: 1940288 Number of successful extensions: 5181 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 5038 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5179 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6484657212 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)