>gb|AY325563.1| Uncultured bacterium clone GA54 putative dissimilatory
           membrane-bound nitrate reductase (narG) gene, partial
           cds
          Length = 653

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 485 catcccacggaccggccggcgcg 507
           |||||||||||||||||||||||
Sbjct: 190 catcccacggaccggccggcgcg 168

>gb|DQ010708.1| Unidentified bacterium clone 19g65 membrane bound nitrate reductase
           (narG) gene, partial cds
          Length = 653

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 485 catcccacggaccggccggcgcg 507
           |||||||||||||||||||||||
Sbjct: 190 catcccacggaccggccggcgcg 168

>gb|AY955184.1| Uncultured bacterium clone GRAMJ4 putative dissimilatory
           membrane-bound nitrate reductase (narG) gene, partial
           cds
          Length = 653

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 485 catcccacggaccggccggcgcg 507
           |||||||||||||||||||||||
Sbjct: 190 catcccacggaccggccggcgcg 168

>gb|DQ233276.1| Uncultured bacterium clone 3_21 dissimilatory nitrate-reductase
           (narG) gene, partial cds
          Length = 653

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 485 catcccacggaccggccggcgc 506
           ||||||||||||||||||||||
Sbjct: 190 catcccacggaccggccggcgc 169

>gb|AY453381.1| Uncultured bacterium clone F89 dissimilatory membrane-bound nitrate
           reductase (narG) gene, partial cds
          Length = 655

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 485 catcccacggaccggccggcgc 506
           ||||||||||||||||||||||
Sbjct: 190 catcccacggaccggccggcgc 169

>gb|AE009409.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 179 of
            187 of the complete sequence
          Length = 12457

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 537  tcgacgatgtcgcccagcaccg 558
            ||||||||||||||||||||||
Sbjct: 5936 tcgacgatgtcgcccagcaccg 5957

>gb|AE008205.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 9 of
            187 of the complete sequence
          Length = 12850

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 537  tcgacgatgtcgcccagcaccg 558
            ||||||||||||||||||||||
Sbjct: 3736 tcgacgatgtcgcccagcaccg 3715

>gb|DQ481169.1| Uncultured bacterium clone LT-075_12 membrane bound nitrate
           reductase (narG) gene, partial cds
          Length = 654

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 485 catcccacggaccggccggcgc 506
           ||||||||||||||||||||||
Sbjct: 190 catcccacggaccggccggcgc 169

>emb|AL049736.10|HSDJ723E3 Human DNA sequence from clone RP4-723E3 on chromosome 20 Contains ESTs,
             STSs and GSSs, complete sequence
          Length = 73112

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 13    agaaagaaaataaaaatcaatc 34
             ||||||||||||||||||||||
Sbjct: 38330 agaaagaaaataaaaatcaatc 38309

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 530     cagccagtcgacgatgtcgcc 550
               |||||||||||||||||||||
Sbjct: 3183783 cagccagtcgacgatgtcgcc 3183803

>ref|NM_214098.1| Sus scrofa interleukin-18 receptor alpha chain (IL-18RA), mRNA
          Length = 1620

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 217  gaaagcagagaaatctctgtc 237
            |||||||||||||||||||||
Sbjct: 1494 gaaagcagagaaatctctgtc 1514

>dbj|AB079258.1| Sus scrofa IL-18Ra mRNA for interleukin-18 receptor alpha chain,
            complete cds
          Length = 1620

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 217  gaaagcagagaaatctctgtc 237
            |||||||||||||||||||||
Sbjct: 1494 gaaagcagagaaatctctgtc 1514

>gb|CP000013.1| Borrelia garinii PBi, complete genome
          Length = 904246

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     aaagaaaataaaaatcaatc 34
              ||||||||||||||||||||
Sbjct: 649156 aaagaaaataaaaatcaatc 649137

>gb|DQ481148.1| Uncultured bacterium clone LT-600_05 membrane bound nitrate
           reductase (narG) gene, partial cds
          Length = 651

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 487 tcccacggaccggccggcgc 506
           ||||||||||||||||||||
Sbjct: 188 tcccacggaccggccggcgc 169

>gb|AC145966.2| Pan troglodytes BAC clone RP43-17M9 from 7, complete sequence
          Length = 197140

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    agaaagaaaataaaaatcaa 32
             ||||||||||||||||||||
Sbjct: 73734 agaaagaaaataaaaatcaa 73753

>gb|AC073341.10| Homo sapiens BAC clone RP11-549I23 from 7, complete sequence
          Length = 185574

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 13   agaaagaaaataaaaatcaa 32
            ||||||||||||||||||||
Sbjct: 7843 agaaagaaaataaaaatcaa 7824

>emb|AL161730.9| Human DNA sequence from clone RP11-441I5 on chromosome 9 Contains the
             DMRTA1 gene for DMRT-like family A1 (DMO) and a CpG
             island, complete sequence
          Length = 170066

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    aaagaaaataaaaatcaatc 34
             ||||||||||||||||||||
Sbjct: 46991 aaagaaaataaaaatcaatc 46972

>emb|AL137898.1|ATT20K12 Arabidopsis thaliana DNA chromosome 3, BAC clone T20K12
          Length = 109155

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    agaaagaaaataaaaatcaa 32
             ||||||||||||||||||||
Sbjct: 30459 agaaagaaaataaaaatcaa 30478

>emb|CR388044.5| Zebrafish DNA sequence from clone CH211-174L12 in linkage group 24,
             complete sequence
          Length = 49249

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    agaaagaaaataaaaatcaa 32
             ||||||||||||||||||||
Sbjct: 20823 agaaagaaaataaaaatcaa 20804

>emb|CR352245.9| Zebrafish DNA sequence from clone DKEY-153L11 in linkage group 16,
             complete sequence
          Length = 136903

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   taacacattacattattgag 126
             ||||||||||||||||||||
Sbjct: 51999 taacacattacattattgag 51980

>emb|BX511161.6| Zebrafish DNA sequence from clone DKEY-248G17 in linkage group 16,
             complete sequence
          Length = 101801

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   taacacattacattattgag 126
             ||||||||||||||||||||
Sbjct: 77281 taacacattacattattgag 77300

>gb|AC060232.6| Homo sapiens chromosome 10 clone RP11-458D17, complete sequence
          Length = 167912

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    aaagaaaataaaaatcaatc 34
             ||||||||||||||||||||
Sbjct: 44837 aaagaaaataaaaatcaatc 44818

>gb|AC097379.2| Homo sapiens BAC clone RP11-277G18 from 4, complete sequence
          Length = 96080

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   gaaagaaaataaaaatcaat 33
            ||||||||||||||||||||
Sbjct: 8673 gaaagaaaataaaaatcaat 8692

>gb|AC008693.9| Homo sapiens chromosome 5 clone CTB-69A13, complete sequence
          Length = 203568

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 8      cttcnagaaagaaaataaaaatc 30
              |||| ||||||||||||||||||
Sbjct: 153436 cttctagaaagaaaataaaaatc 153458

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 320     cgcagcagcctcctccgccg 339
               ||||||||||||||||||||
Sbjct: 2633874 cgcagcagcctcctccgccg 2633855

>gb|AC106757.2| Homo sapiens chromosome 5 clone RP11-205J9, complete sequence
          Length = 122504

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 8      cttcnagaaagaaaataaaaatc 30
              |||| ||||||||||||||||||
Sbjct: 107980 cttctagaaagaaaataaaaatc 107958

>dbj|AP005741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0470H09
          Length = 141257

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   cgcagcagcctcctccgccg 339
             ||||||||||||||||||||
Sbjct: 12155 cgcagcagcctcctccgccg 12136

>gb|AF191325.1|AF191325 Mus musculus SRY-related protein SOX 8 (Sox8) gene, partial cds
          Length = 4519

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 420 gtcggagaggggaggtttctcccg 443
           ||||||||||||| ||||||||||
Sbjct: 325 gtcggagaggggacgtttctcccg 302

>emb|CR381646.8| Zebrafish DNA sequence from clone DKEY-241L7 in linkage group 20,
             complete sequence
          Length = 183151

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    aaagaaaataaaaatcaatc 34
             ||||||||||||||||||||
Sbjct: 49862 aaagaaaataaaaatcaatc 49843

>dbj|AK060316.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E04, full
           insert sequence
          Length = 1361

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 cgcagcagcctcctccgccg 339
           ||||||||||||||||||||
Sbjct: 252 cgcagcagcctcctccgccg 233

>emb|CT573218.4| CH250-10B18, complete sequence
          Length = 190487

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    aaagaaaataaaaatcaatc 34
             ||||||||||||||||||||
Sbjct: 87648 aaagaaaataaaaatcaatc 87667

>emb|AL807747.10| Mouse DNA sequence from clone RP23-300N21 on chromosome 4, complete
             sequence
          Length = 228003

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    gaaaataaaaatcaatcgat 37
             ||||||||||||||||||||
Sbjct: 67988 gaaaataaaaatcaatcgat 67969

>gb|AC154418.2| Mus musculus BAC clone RP24-209I7 from chromosome 17, complete sequence
          Length = 195475

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 420    gtcggagaggggaggtttctcccg 443
              ||||||||||||| ||||||||||
Sbjct: 124289 gtcggagaggggacgtttctcccg 124312

>emb|AL731854.18| Mouse DNA sequence from clone RP23-120A20 on chromosome 2, complete
              sequence
          Length = 208762

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     aaagaaaataaaaatcaatc 34
              ||||||||||||||||||||
Sbjct: 120928 aaagaaaataaaaatcaatc 120947


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,732,021
Number of Sequences: 3902068
Number of extensions: 4732021
Number of successful extensions: 104902
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104721
Number of HSP's gapped (non-prelim): 181
length of query: 558
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 535
effective length of database: 17,143,297,704
effective search space: 9171664271640
effective search space used: 9171664271640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)