>PPA1_ASPNG (P20584) Phosphate-repressible acid phosphatase precursor (EC|
           3.1.3.2) (Acid phosphatase PII)
          Length = 436

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 20/62 (32%), Positives = 26/62 (41%)
 Frame = -3

Query: 300 AVVWVRALGGSYQPFSTPHHHPVTLVXXGFL*TXCGLKSFVLEHHQPGVLPKPSPRSPLL 121
           ++ W+    G   PF    HHP+TL       T  G  S       P +LP P  +  LL
Sbjct: 364 SMAWMLTSLGDVCPFFKLVHHPLTLSSA----TSTGTSSLSSRATAPSILP-PCEQQHLL 418

Query: 120 CP 115
           CP
Sbjct: 419 CP 420

>CRUP_STRCO (Q9ACU1) Bifunctional crtB/uppS protein [Includes: Phytoene|
           synthase (EC 2.5.1.-); Undecaprenyl pyrophosphate
           synthetase 3 (EC 2.5.1.31) (UPP synthetase 3)
           (Di-trans,poly-cis-decaprenylcistransferase 3)
           (Undecaprenyl diphosphate synthase 3) (U
          Length = 564

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
 Frame = +1

Query: 130 APGRRLWKDARLVML*NK*FQAAXSSQEAXXDQGHRMMMRR*ERLIGTTQRSNPYH---- 297
           A G R W +AR ++                 DQGHR  +R   RL+   QR+   H    
Sbjct: 328 ADGNRRWAEARGLL----------------ADQGHRAGIRAVLRLVNAAQRTGIRHVTVY 371

Query: 298 SFSWKKWY 321
            FS + WY
Sbjct: 372 MFSTENWY 379

>GAIPB_CUCMA (Q6EI05) DELLA protein GAIP-B (Gibberellic acid-insensitive phloem|
           protein B) (GAIP-B) (CmGAIP-B)
          Length = 587

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -3

Query: 303 EAVVWVRALGGSYQPFSTPHHHPVTLVXXGFL*TXCGLKSFVLEHHQPGVLPKPSP 136
           EA+  V+  G S+  F T H++P  L           L+S + E H P   P+P P
Sbjct: 73  EAMCQVQDTGLSHLAFDTVHYNPSDL--------STWLESMITELHPPPSFPQPHP 120

>TRMU_SYNEL (Q8CWM0) Probable tRNA|
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           (EC 2.1.1.61)
          Length = 369

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
 Frame = -3

Query: 327 PTIPFFPAEAVVWV---RALGGSY-QPFSTPHHHPV 232
           P     P +A VW    R LGG   QPF TP  HP+
Sbjct: 327 PQFGVTPGQAAVWYAGDRLLGGGIIQPFGTPTLHPL 362

>NCOR1_HUMAN (O75376) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR)|
          Length = 2440

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 193  LEIICSRASPAGRPSKAFSQEPPVVSSHKLENAPT 89
            +E+I   +SPA    K  + +P VV +++ EN PT
Sbjct: 1973 IEVISPASSPAPPQEKLQTYQPEVVKANQAENDPT 2007

>YEHM_ECOLI (P33349) Hypothetical protein yehM|
          Length = 759

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 180 VLEHHQPGVLPKPSPRSPLLCPLTSLRMHLLLRSHAV 70
           VLEH+Q   LP  + + PL CP  ++  H  L   A+
Sbjct: 712 VLEHYQLAQLPVSALQMPLHCPPQAIAHHQQLEQQAL 748


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,334,406
Number of Sequences: 219361
Number of extensions: 1019558
Number of successful extensions: 2439
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2439
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)