Clone Name | rbasd23o15 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | emb|BX470168.7| Zebrafish DNA sequence from clone CH211-288L20 i... | 46 | 0.050 | 2 | emb|BX322791.7| Zebrafish DNA sequence from clone RP71-55E12, co... | 46 | 0.050 | 3 | gb|AC007156.2|AC007156 Homo sapiens chromosome 18, clone hRPK.41... | 42 | 0.77 | 4 | dbj|AP005271.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... | 42 | 0.77 | 5 | dbj|AB022221.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... | 40 | 3.1 |
---|
>emb|BX470168.7| Zebrafish DNA sequence from clone CH211-288L20 in linkage group 6, complete sequence Length = 148605 Score = 46.1 bits (23), Expect = 0.050 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 ggcctcatctctggatgatggca 69 ||||||||||||||||||||||| Sbjct: 134372 ggcctcatctctggatgatggca 134350
>emb|BX322791.7| Zebrafish DNA sequence from clone RP71-55E12, complete sequence Length = 127643 Score = 46.1 bits (23), Expect = 0.050 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 ggcctcatctctggatgatggca 69 ||||||||||||||||||||||| Sbjct: 113305 ggcctcatctctggatgatggca 113283
>gb|AC007156.2|AC007156 Homo sapiens chromosome 18, clone hRPK.419_J_16, complete sequence Length = 203591 Score = 42.1 bits (21), Expect = 0.77 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tggcctcatctctggatgatg 66 ||||||||||||||||||||| Sbjct: 154447 tggcctcatctctggatgatg 154427
>dbj|AP005271.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-752I5, complete sequence Length = 200108 Score = 42.1 bits (21), Expect = 0.77 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 tggcctcatctctggatgatg 66 ||||||||||||||||||||| Sbjct: 116968 tggcctcatctctggatgatg 116988
>dbj|AB022221.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSD23 Length = 33479 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 aacacctatacatattgaaa 39 |||||||||||||||||||| Sbjct: 29908 aacacctatacatattgaaa 29927 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,340,609 Number of Sequences: 3902068 Number of extensions: 1340609 Number of successful extensions: 27398 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 27393 Number of HSP's gapped (non-prelim): 5 length of query: 238 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 216 effective length of database: 17,147,199,772 effective search space: 3703795150752 effective search space used: 3703795150752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)