ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23o13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SUCP_AGRVI (P33910) Sucrose phosphorylase (EC 2.4.1.7) (Sucrose ... 32 0.44
2VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous... 31 0.99
3PROS_DROME (P29617) Protein prospero 31 1.3
4ATF2_CHICK (O93602) Cyclic AMP-dependent transcription factor AT... 31 1.3
5NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Si... 31 1.3
6LARG2_HUMAN (Q8N3Y3) Glycosyltransferase-like protein LARGE2 (EC... 30 2.2
7SPEN_DROME (Q8SX83) Protein split ends 30 2.2
8LEGA_PEA (P02857) Legumin A precursor [Contains: Legumin A alpha... 30 2.2
9FTSK_SALTY (Q8ZQD5) DNA translocase ftsK 30 2.9
10RNB_HHV1M (P56958) RNA-binding protein (Vmw21) 30 2.9
11WAPL_DROME (Q9W517) Protein wings apart-like (Protein parallel s... 29 3.7
12RDP1_SCHPO (O13862) Transcriptional activator protein rdp1 (Rhp5... 29 3.7
13TWIST_DROVI (Q9TX44) Protein twist 29 3.7
14IRS1_XENTR (Q6P4Y6) Insulin receptor substrate 1 (IRS-1) 29 3.7
15HEPA_VZVD (P09300) DNA helicase/primase complex-associated protein 29 3.7
16AT221_ASPFU (Q4WH97) Autophagy-related protein 22-1 29 4.9
17CD2L6_MOUSE (Q8BWD8) Cell division cycle 2-like protein kinase 6... 29 4.9
18YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-) 29 4.9
19ZN282_HUMAN (Q9UDV7) Zinc finger protein 282 (HTLV-I U5RE-bindin... 29 4.9
20TRHY_HUMAN (Q07283) Trichohyalin 28 6.4
21RAD21_MOUSE (Q61550) Double-strand-break repair protein rad21 ho... 28 6.4
22TIM54_NEUCR (Q9C0Q7) Mitochondrial import inner membrane translo... 28 6.4
23PHF1_HUMAN (O43189) PHD finger protein 1 (PHF1 protein) 28 6.4
24CD2L6_HUMAN (Q9BWU1) Cell division cycle 2-like protein kinase 6... 28 6.4
25ANI3_CAEEL (Q9XWN6) Anillin-like protein 3 28 6.4
26FTSK_SALTI (Q8Z814) DNA translocase ftsK 28 6.4
27INVO_SAGOE (P24712) Involucrin 28 6.4
28IMA1_XENLA (P52170) Importin alpha-1 subunit (Karyopherin alpha-... 28 8.3
29CF2_DROME (P20385) Chorion transcription factor Cf2, isoforms I/II 28 8.3
30SPAA_STRDO (P21979) Cell surface antigen I/II precursor 28 8.3
31CF23_DROME (Q01522) Chorion transcription factor Cf2, isoform III 28 8.3
32NDF1_XENLA (Q91616) Neurogenic differentiation factor 1 (NeuroD1) 28 8.3
33MYST3_RAT (Q5TKR9) Histone acetyltransferase MYST3 (EC 2.3.1.48)... 28 8.3
34BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-)... 28 8.3

>SUCP_AGRVI (P33910) Sucrose phosphorylase (EC 2.4.1.7) (Sucrose|
           glucosyltransferase)
          Length = 488

 Score = 32.3 bits (72), Expect = 0.44
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
 Frame = -1

Query: 407 RVGLWGSIRALARGYEIIMGLLLFTPIAFLAWF-PFV-----SEFQTR-MLFNQAFSRGL 249
           R+G W  +RALA   EI+  L++    A  +WF  F+     SEF    M F +AF RG 
Sbjct: 64  RLGSWDDVRALAGSVEIMADLIVNHVSAQSSWFQDFIAKGSDSEFADMFMTFGKAFPRGA 123

Query: 248 QISRILGGHKKDRAARSKDDR 186
               +L  ++     R +  R
Sbjct: 124 SEQDLLNIYRPRLGCRFQRPR 144



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>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system|
           defective) (Homeobox protein NK-2)
          Length = 723

 Score = 31.2 bits (69), Expect = 0.99
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 228 TQDPRDLQTTAEGLVEEHPSLELRHEREPRQER-DRGEEQQPHD 356
           T  P    T    L    PSLE + ERE R++R DR E Q+ H+
Sbjct: 41  TVSPSSPATPKRPLRTSTPSLERKREREDREDREDRKERQERHE 84



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>PROS_DROME (P29617) Protein prospero|
          Length = 1403

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 28/101 (27%), Positives = 35/101 (34%)
 Frame = +3

Query: 105  PQPLQPSSMPTIVYLPYY*LRRQSIHLPIVLAPRRPVLLVPTQDPRDLQTTAEGLVEEHP 284
            P P+ P S+PT V +P       S+H   V +P  P            Q TA  L + H 
Sbjct: 1080 PPPMMPVSLPTSVAIP-----NPSLHESKVFSPYSPFF---NPHAAAGQATAAQLHQHHQ 1131

Query: 285  SLELRHEREPRQERDRGEEQQPHDDLVPTS*SPDRPPQPHP 407
                 H+              P   L     S D PP PHP
Sbjct: 1132 QHHPHHQ-------SMQLSSSPPGSLGALMDSRDSPPLPHP 1165



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>ATF2_CHICK (O93602) Cyclic AMP-dependent transcription factor ATF-2|
           (Activating transcription factor 2)
          Length = 487

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 28/151 (18%)
 Frame = +3

Query: 42  TTTTLPMQFAAWNTYIHTTDKPQPLQ---PSSMPTIVYLPYY*LRRQSIHLPIVLAPRRP 212
           T++T+  Q  + N  I     P PL    P+     V +P   +   ++H+P  +   RP
Sbjct: 175 TSSTVITQAPSSNRPIVPVPGPFPLLLHLPNGQTMPVAIPAS-ITNSNVHVPAAVPLVRP 233

Query: 213 VLLVPT-------QDPRDLQTTAE-----GLVEEHP-------------SLELRHEREPR 317
           V +VP+         P+ +Q+ A+      L ++HP              L      EPR
Sbjct: 234 VTMVPSIPGIPGPSSPQPVQSEAKLRLKAALTQQHPQVTNGDTAKGHPSGLVRTQSEEPR 293

Query: 318 QERDRGEEQQPHDDLVPTS*SPDRPPQPHPH 410
            +      QQP      T  SP +P Q  P+
Sbjct: 294 PQ----SLQQPATSTTETPASPAQPTQQTPN 320



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>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator|
            of retinoic acid and thyroid hormone receptor) (SMRT)
            (SMRTe) (Thyroid-, retinoic-acid-receptor-associated
            corepressor) (T3 receptor-associating factor) (TRAC) (CTG
            repeat p
          Length = 2517

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 24/70 (34%), Positives = 34/70 (48%)
 Frame = +3

Query: 192  VLAPRRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPT 371
            +L+PR P LL PT DPR   +  + L  +   L+ R    P  +  +  E  P +D  PT
Sbjct: 937  LLSPR-PSLLTPTGDPRANASPQKPL--DLKQLKQRAAAIPPIQVTKVHEP-PREDAAPT 992

Query: 372  S*SPDRPPQP 401
              +P  PP P
Sbjct: 993  KPAPPAPPPP 1002



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>LARG2_HUMAN (Q8N3Y3) Glycosyltransferase-like protein LARGE2 (EC 2.4.-.-)|
           (Glycosyltransferase-like 1B)
          Length = 721

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
 Frame = +3

Query: 204 RRPVLLVPTQDP---RDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPTS 374
           RR + + P+Q P     LQ     L EE P  E R             +QQ     V  +
Sbjct: 372 RRELFVCPSQPPPGAEQLQQALAQLDEEDPCFEFR-------------QQQLTVHRVHVT 418

Query: 375 *SPDRPPQPHPHD 413
             P  PP P PHD
Sbjct: 419 FLPHEPPPPRPHD 431



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>SPEN_DROME (Q8SX83) Protein split ends|
          Length = 5560

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 18/73 (24%), Positives = 29/73 (39%)
 Frame = +3

Query: 192  VLAPRRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPT 371
            V+  ++P ++ P + P  LQ      V  H         +P +      E+     L PT
Sbjct: 4821 VIQQQQPQIVAPAKQPIILQQNPLPTVLHHAQHTTVRPPQPLKAHVLNREKNIQQQLTPT 4880

Query: 372  S*SPDRPPQPHPH 410
              +  +PPQ  PH
Sbjct: 4881 KQAVAQPPQHAPH 4893



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>LEGA_PEA (P02857) Legumin A precursor [Contains: Legumin A alpha chain|
           (Legumin A acidic chain); Legumin A beta chain (Legumin
           A basic chain)]
          Length = 517

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 282 PSLELRHEREPRQERDRGEEQQP 350
           P  + RH+R  RQE D  EE+QP
Sbjct: 259 PEKQARHQRGSRQEEDEDEEKQP 281



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>FTSK_SALTY (Q8ZQD5) DNA translocase ftsK|
          Length = 1351

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 3/121 (2%)
 Frame = +3

Query: 54   LPMQFAAWNTYIHTTDKPQPLQPSSMPTIVYLPYY*LRRQSIHLPIVLAPRRPVLLVPTQ 233
            L  QFAA     ++ ++P   QP S+  + + P   L  +  H P+      P    P Q
Sbjct: 668  LARQFAASQQQRYSGEQPAGAQPFSLDDLDFSPMKVLVDEGPHEPLFTPGVMPE-STPVQ 726

Query: 234  DPRDLQTTAEGLVEEHPSLELRHEREPRQE-RDRGEEQQPHDDLVPTS--*SPDRPPQPH 404
             P   Q   +    + P       ++P+Q    + + QQP   + P      P +P  P 
Sbjct: 727  QPVAPQPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQ 786

Query: 405  P 407
            P
Sbjct: 787  P 787



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>RNB_HHV1M (P56958) RNA-binding protein (Vmw21)|
          Length = 161

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = +3

Query: 201 PRRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPTS*S 380
           PR P +  P ++PR+ +               R  R+PR  RD  + +QP     P S  
Sbjct: 91  PREPRVPRPPREPREPRVP-------------RASRDPRVPRDPRDPRQPRSPREPRSPR 137

Query: 381 PDRPPQ 398
             RPP+
Sbjct: 138 EPRPPR 143



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>WAPL_DROME (Q9W517) Protein wings apart-like (Protein parallel sister|
           chromatids)
          Length = 1741

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 285 SLELRHEREPRQERDRGEEQQPHDDLVPTS*SPDRPPQ 398
           SLE   + E  +E +  EE+ P  +      SPD+PP+
Sbjct: 435 SLEPNEDEEEEEEEEDEEEEPPEINYCTVKISPDKPPK 472



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>RDP1_SCHPO (O13862) Transcriptional activator protein rdp1 (Rhp51-DRE-binding|
           protein 1)
          Length = 478

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +3

Query: 348 PHDDLVPTS*SPDRPPQPHPHD 413
           PHDDL P S S  R  +PHP D
Sbjct: 227 PHDDLRPLSDSRRRARRPHPSD 248



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>TWIST_DROVI (Q9TX44) Protein twist|
          Length = 519

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 14/44 (31%), Positives = 28/44 (63%)
 Frame = +3

Query: 243 DLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPTS 374
           D QT A  +  EH  L L+ +++ +Q++ + ++QQ + D +PT+
Sbjct: 179 DCQTDALSMQPEHKKL-LQQQQQQQQQQQQQQQQQLYVDYLPTT 221



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>IRS1_XENTR (Q6P4Y6) Insulin receptor substrate 1 (IRS-1)|
          Length = 654

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
 Frame = +3

Query: 120 PSSMPTIVYLPYY*LRRQSIHLPIVLAPRRPVLLVPTQDPRDLQTTAEG----LVEEHPS 287
           P  +   V+LP     R++ ++ + L  RR +++ P     ++    EG    L +E  +
Sbjct: 325 PGVLEAPVFLPPSPGPRETNYISMALYGRRSLVMEPISTNANVPAE-EGSRLTLFQEEDN 383

Query: 288 LELRHEREPRQER------DRGEEQQPHDDLVPTS*SPDRP 392
             +  +REPRQE             Q +  + PTS SP  P
Sbjct: 384 YAMMGQREPRQETGYMPMLPGSNRSQDYMPMTPTSISPPAP 424



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>HEPA_VZVD (P09300) DNA helicase/primase complex-associated protein|
          Length = 771

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
 Frame = +1

Query: 34  SCALL--LHCQCNLQPGIHTYI-----LLTSHNRYSHPA 129
           SCA +  + C  +L+P IHT++     LL +HN +S P+
Sbjct: 717 SCACIPPIDCAAHLKPLIHTFVTIINHLLDAHNDFSSPS 755



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>AT221_ASPFU (Q4WH97) Autophagy-related protein 22-1|
          Length = 609

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +3

Query: 267 LVEEHPSLELRHEREPRQERDRGEEQQPHDD 359
           LV  HPS+ LR  REPR   D    Q+ H D
Sbjct: 203 LVRHHPSV-LRSAREPRPALDDSRAQEGHSD 232



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>CD2L6_MOUSE (Q8BWD8) Cell division cycle 2-like protein kinase 6 (EC 2.7.11.22)|
           (CDC2-related protein kinase 6)
          Length = 501

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = +3

Query: 231 QDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQ--PHDDLVPTS*SPDRPPQPH 404
           +DP        G    +P  E  +E EP ++ D+ + QQ  PH      +     PPQ  
Sbjct: 337 EDPLPTLDVFAGCQIPYPKREFLNEDEPEEKGDKNQPQQQNPHQQPAAPAQQTAAPPQAP 396

Query: 405 P 407
           P
Sbjct: 397 P 397



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>YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-)|
          Length = 1117

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 8/46 (17%)
 Frame = +3

Query: 24  HMIILCTTTTLPMQFAAWNTYIH--------TTDKPQPLQPSSMPT 137
           H + L  T    MQFA W T IH        T  +P PLQ    P+
Sbjct: 337 HFVFLSATIPNAMQFAEWITKIHRQPCHVVYTDFRPTPLQHYLFPS 382



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>ZN282_HUMAN (Q9UDV7) Zinc finger protein 282 (HTLV-I U5RE-binding protein 1)|
           (HUB-1)
          Length = 671

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 10/66 (15%)
 Frame = +3

Query: 240 RDLQT--TAEGLVEEHPSLE-LRHEREP-------RQERDRGEEQQPHDDLVPTS*SPDR 389
           RD+ T   +E L+  H  L  ++ E +P         + + G +  P D L+     P  
Sbjct: 347 RDIPTDPNSESLISAHDILSWIKQEEQPYPWGPRDSMDGELGLDSGPSDSLLMVKNPPPA 406

Query: 390 PPQPHP 407
           PPQP P
Sbjct: 407 PPQPQP 412



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>TRHY_HUMAN (Q07283) Trichohyalin|
          Length = 1898

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = +3

Query: 204  RRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLV 365
            RR  L    +   +LQ   E L+ E P    R ERE RQ R+  E QQ  + L+
Sbjct: 1089 RRQELERQYRKEEELQQEEEQLLREEPEKRRRQERE-RQCREEEELQQEEEQLL 1141



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>RAD21_MOUSE (Q61550) Double-strand-break repair protein rad21 homolog (Pokeweed|
           agglutinin-binding protein 29) (PW29) (SCC1 homolog)
          Length = 635

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +3

Query: 210 PVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDD 359
           PV L P + P   Q          P LEL  E+E  +E+++ EE++  D+
Sbjct: 505 PVELPPEEPPNICQLI--------PELELLPEKEKEKEKEKEEEEEEEDE 546



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>TIM54_NEUCR (Q9C0Q7) Mitochondrial import inner membrane translocase subunit|
           tim-54
          Length = 425

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
 Frame = +3

Query: 192 VLAPRRPVLLVPTQDPRDLQTTAEGLV--EEHPSLELRHEREPRQERDRGEEQQPHDDLV 365
           ++AP  P  L PT  P      AEG    E+ P+ E + E  P+                
Sbjct: 187 LVAPAEPAPLPPTPAP----AAAEGSTSTEDKPAEEKKEEEAPK---------------- 226

Query: 366 PTS*SPDRPPQPHPHD 413
                P RPPQP P++
Sbjct: 227 -----PKRPPQPKPYN 237



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>PHF1_HUMAN (O43189) PHD finger protein 1 (PHF1 protein)|
          Length = 567

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +3

Query: 234 DPRDLQTTAEGLVEE-HPSLELRHEREPRQERDRGEEQQPHDDLVPTS*SPDRPPQPHPH 410
           +P  L+   +G VEE  P   +R++ EP+++R+R   Q+     V        PP P P+
Sbjct: 372 EPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHLQRALQASV-------SPPSPSPN 424



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>CD2L6_HUMAN (Q9BWU1) Cell division cycle 2-like protein kinase 6 (EC 2.7.11.22)|
           (CDC2-related protein kinase 6) (Death-preventing
           kinase) (Cyclin-dependent kinase 11)
          Length = 502

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = +3

Query: 231 QDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPTS*SPDR---PPQP 401
           +DP        G    +P  E  +E +P ++ D+ ++QQ +    PT+  P +   PPQ 
Sbjct: 337 EDPLPTLDVFAGCQIPYPKREFLNEDDPEEKGDKNQQQQQNQHQQPTA-PPQQAAAPPQA 395

Query: 402 HP 407
            P
Sbjct: 396 PP 397



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>ANI3_CAEEL (Q9XWN6) Anillin-like protein 3|
          Length = 709

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = +1

Query: 220 LCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARNAIGVKSSSPMMIS 363
           L   R+L ICR RLK  L+ +R   + T   H    I     S M+IS
Sbjct: 367 LASQRVLLICRERLKVQLEEVRRLQAMTVVRHPPPPINRHFKSTMVIS 414



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>FTSK_SALTI (Q8Z814) DNA translocase ftsK|
          Length = 1343

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
 Frame = +3

Query: 54   LPMQFAAWNTYIHTTDKPQPLQPSSMPTIVYLPYY*LRRQSIHLPIVLAPRRPVLLVPTQ 233
            L  QFAA     ++ ++P   QP S+  + + P   L  +  H P+      P    P Q
Sbjct: 665  LARQFAASQQQRYSGEQPAGAQPFSLDDLDFSPMKVLVDEGPHEPLFTPGVMPE-STPVQ 723

Query: 234  DPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPTS--*SPDRPPQPHP 407
             P   Q   +  V   P    ++++  +    + + QQP   + P      P +P  P P
Sbjct: 724  QPVAPQPQYQQPVAPQP----QYQQPQQPVASQPQYQQPQQPVAPQPQYQQPQQPVAPQP 779



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>INVO_SAGOE (P24712) Involucrin|
          Length = 493

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
 Frame = +3

Query: 78  NTYIHTTDKPQPLQPSSMPTIVYLPYY*L-RRQSIHLPIVLAPRRPVLLVPTQDPRDLQT 254
           NT      +P PL P      V LP   L + +  H+ IV         VP Q+    Q 
Sbjct: 28  NTQQEQRKQPAPLPPPCQKVPVELPVEVLSKHEEKHMTIVKG-------VPEQECEQQQP 80

Query: 255 TAEGLVEEHPSLELRH------EREPRQERDRGEEQQ 347
             + L ++H   +  H      E++ +QE+ + E+QQ
Sbjct: 81  QEQELQQQHWEQDKEHQKAENPEQQLKQEKVQREKQQ 117



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>IMA1_XENLA (P52170) Importin alpha-1 subunit (Karyopherin alpha-1 subunit)|
          Length = 521

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = +3

Query: 162 LRRQSIHLP--IVLAPRRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRG 335
           L+R+++ LP  ++L+P +  +      P  L+   +G+    P  ELR  +  R+   R 
Sbjct: 44  LKRRNVCLPEELILSPEKNAMQSVQVPPLSLEEIVQGMNSGDPENELRCTQAARKMLSR- 102

Query: 336 EEQQPHDDLV 365
           E   P +D++
Sbjct: 103 ERNPPLNDII 112



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>CF2_DROME (P20385) Chorion transcription factor Cf2, isoforms I/II|
          Length = 510

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 222 VPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQ 347
           +P   PRD++ T E   E+H   +L+ E   +Q+  + ++QQ
Sbjct: 210 LPAMAPRDMRLTPE---EQHHQQQLQAEHHHQQQHQQQQQQQ 248



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>SPAA_STRDO (P21979) Cell surface antigen I/II precursor|
          Length = 1528

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
 Frame = +3

Query: 93   TTDKPQPLQPSSMPTIVYLPYY*LRRQSIHLPIVLAPR-RPVLLVPTQDP------RDLQ 251
            T +KP P    + P     P Y + ++ + LP+   P+  P    P+++P      + ++
Sbjct: 844  TKEKPTPPVEPTKPDE---PTYEVEKELVDLPV--EPKYEPEPTPPSKNPDQSIPEKPVE 898

Query: 252  TTAEGLVEEHPS-LELRHEREPRQERDRGEEQQPHDDLVPTS*SPDRPP 395
             T E   E  P+ +E  +E+EP   +   ++++P   + P+  S   PP
Sbjct: 899  PTYEVEKELEPAPVEPSYEKEPTPPQSTPDQEEPEKPVEPSYQSLPTPP 947



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>CF23_DROME (Q01522) Chorion transcription factor Cf2, isoform III|
          Length = 514

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 222 VPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQ 347
           +P   PRD++ T E   E+H   +L+ E   +Q+  + ++QQ
Sbjct: 210 LPAMAPRDMRLTPE---EQHHQQQLQAEHHHQQQHQQQQQQQ 248



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>NDF1_XENLA (Q91616) Neurogenic differentiation factor 1 (NeuroD1)|
          Length = 352

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +3

Query: 228 TQDPRDLQTTAEGLVEEHPSLELRHER-EPRQERDRGEEQQPHDD 359
           +QD  DL+     L++E     L H   E  +E D G+E++  D+
Sbjct: 28  SQDENDLEKKEGELMKEDDEDSLNHHNGEENEEEDEGDEEEEDDE 72



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>MYST3_RAT (Q5TKR9) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)|
            (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
            3) (Monocytic leukemia zinc finger protein) (Monocytic
            leukemia zinc finger homolog)
          Length = 1998

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = +3

Query: 195  LAPRRPVLLVPTQDPRDLQTTAEGLVEEH-PSLELRHEREPRQERDRGEEQQPHDDLVPT 371
            + P +P     TQ+  +L    EGLVEE    +    + E  +E D           + +
Sbjct: 1193 IVPIKPGRKPRTQESEELVEVKEGLVEERKEEMHTEADEEAEEEEDAASSDIRAMSPLDS 1252

Query: 372  S*SPDRPPQ 398
            S SPD  P+
Sbjct: 1253 SNSPDADPK 1261



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>BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING|
           finger protein 20)
          Length = 975

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 243 DLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQP 350
           DL T  + LV   P  +    +E + +R+RGE Q+P
Sbjct: 119 DLLTERKALVVPEPEPDSDSNQERKDDRERGEGQEP 154


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,810,343
Number of Sequences: 219361
Number of extensions: 1135425
Number of successful extensions: 4803
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 4334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4756
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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