Clone Name | rbasd23o13 |
---|---|
Clone Library Name | barley_pub |
>SUCP_AGRVI (P33910) Sucrose phosphorylase (EC 2.4.1.7) (Sucrose| glucosyltransferase) Length = 488 Score = 32.3 bits (72), Expect = 0.44 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 7/81 (8%) Frame = -1 Query: 407 RVGLWGSIRALARGYEIIMGLLLFTPIAFLAWF-PFV-----SEFQTR-MLFNQAFSRGL 249 R+G W +RALA EI+ L++ A +WF F+ SEF M F +AF RG Sbjct: 64 RLGSWDDVRALAGSVEIMADLIVNHVSAQSSWFQDFIAKGSDSEFADMFMTFGKAFPRGA 123 Query: 248 QISRILGGHKKDRAARSKDDR 186 +L ++ R + R Sbjct: 124 SEQDLLNIYRPRLGCRFQRPR 144
>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system| defective) (Homeobox protein NK-2) Length = 723 Score = 31.2 bits (69), Expect = 0.99 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +3 Query: 228 TQDPRDLQTTAEGLVEEHPSLELRHEREPRQER-DRGEEQQPHD 356 T P T L PSLE + ERE R++R DR E Q+ H+ Sbjct: 41 TVSPSSPATPKRPLRTSTPSLERKREREDREDREDRKERQERHE 84
>PROS_DROME (P29617) Protein prospero| Length = 1403 Score = 30.8 bits (68), Expect = 1.3 Identities = 28/101 (27%), Positives = 35/101 (34%) Frame = +3 Query: 105 PQPLQPSSMPTIVYLPYY*LRRQSIHLPIVLAPRRPVLLVPTQDPRDLQTTAEGLVEEHP 284 P P+ P S+PT V +P S+H V +P P Q TA L + H Sbjct: 1080 PPPMMPVSLPTSVAIP-----NPSLHESKVFSPYSPFF---NPHAAAGQATAAQLHQHHQ 1131 Query: 285 SLELRHEREPRQERDRGEEQQPHDDLVPTS*SPDRPPQPHP 407 H+ P L S D PP PHP Sbjct: 1132 QHHPHHQ-------SMQLSSSPPGSLGALMDSRDSPPLPHP 1165
>ATF2_CHICK (O93602) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) Length = 487 Score = 30.8 bits (68), Expect = 1.3 Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 28/151 (18%) Frame = +3 Query: 42 TTTTLPMQFAAWNTYIHTTDKPQPLQ---PSSMPTIVYLPYY*LRRQSIHLPIVLAPRRP 212 T++T+ Q + N I P PL P+ V +P + ++H+P + RP Sbjct: 175 TSSTVITQAPSSNRPIVPVPGPFPLLLHLPNGQTMPVAIPAS-ITNSNVHVPAAVPLVRP 233 Query: 213 VLLVPT-------QDPRDLQTTAE-----GLVEEHP-------------SLELRHEREPR 317 V +VP+ P+ +Q+ A+ L ++HP L EPR Sbjct: 234 VTMVPSIPGIPGPSSPQPVQSEAKLRLKAALTQQHPQVTNGDTAKGHPSGLVRTQSEEPR 293 Query: 318 QERDRGEEQQPHDDLVPTS*SPDRPPQPHPH 410 + QQP T SP +P Q P+ Sbjct: 294 PQ----SLQQPATSTTETPASPAQPTQQTPN 320
>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator| of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) (CTG repeat p Length = 2517 Score = 30.8 bits (68), Expect = 1.3 Identities = 24/70 (34%), Positives = 34/70 (48%) Frame = +3 Query: 192 VLAPRRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPT 371 +L+PR P LL PT DPR + + L + L+ R P + + E P +D PT Sbjct: 937 LLSPR-PSLLTPTGDPRANASPQKPL--DLKQLKQRAAAIPPIQVTKVHEP-PREDAAPT 992 Query: 372 S*SPDRPPQP 401 +P PP P Sbjct: 993 KPAPPAPPPP 1002
>LARG2_HUMAN (Q8N3Y3) Glycosyltransferase-like protein LARGE2 (EC 2.4.-.-)| (Glycosyltransferase-like 1B) Length = 721 Score = 30.0 bits (66), Expect = 2.2 Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 3/73 (4%) Frame = +3 Query: 204 RRPVLLVPTQDP---RDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPTS 374 RR + + P+Q P LQ L EE P E R +QQ V + Sbjct: 372 RRELFVCPSQPPPGAEQLQQALAQLDEEDPCFEFR-------------QQQLTVHRVHVT 418 Query: 375 *SPDRPPQPHPHD 413 P PP P PHD Sbjct: 419 FLPHEPPPPRPHD 431
>SPEN_DROME (Q8SX83) Protein split ends| Length = 5560 Score = 30.0 bits (66), Expect = 2.2 Identities = 18/73 (24%), Positives = 29/73 (39%) Frame = +3 Query: 192 VLAPRRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPT 371 V+ ++P ++ P + P LQ V H +P + E+ L PT Sbjct: 4821 VIQQQQPQIVAPAKQPIILQQNPLPTVLHHAQHTTVRPPQPLKAHVLNREKNIQQQLTPT 4880 Query: 372 S*SPDRPPQPHPH 410 + +PPQ PH Sbjct: 4881 KQAVAQPPQHAPH 4893
>LEGA_PEA (P02857) Legumin A precursor [Contains: Legumin A alpha chain| (Legumin A acidic chain); Legumin A beta chain (Legumin A basic chain)] Length = 517 Score = 30.0 bits (66), Expect = 2.2 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +3 Query: 282 PSLELRHEREPRQERDRGEEQQP 350 P + RH+R RQE D EE+QP Sbjct: 259 PEKQARHQRGSRQEEDEDEEKQP 281
>FTSK_SALTY (Q8ZQD5) DNA translocase ftsK| Length = 1351 Score = 29.6 bits (65), Expect = 2.9 Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 3/121 (2%) Frame = +3 Query: 54 LPMQFAAWNTYIHTTDKPQPLQPSSMPTIVYLPYY*LRRQSIHLPIVLAPRRPVLLVPTQ 233 L QFAA ++ ++P QP S+ + + P L + H P+ P P Q Sbjct: 668 LARQFAASQQQRYSGEQPAGAQPFSLDDLDFSPMKVLVDEGPHEPLFTPGVMPE-STPVQ 726 Query: 234 DPRDLQTTAEGLVEEHPSLELRHEREPRQE-RDRGEEQQPHDDLVPTS--*SPDRPPQPH 404 P Q + + P ++P+Q + + QQP + P P +P P Sbjct: 727 QPVAPQPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQ 786 Query: 405 P 407 P Sbjct: 787 P 787
>RNB_HHV1M (P56958) RNA-binding protein (Vmw21)| Length = 161 Score = 29.6 bits (65), Expect = 2.9 Identities = 19/66 (28%), Positives = 28/66 (42%) Frame = +3 Query: 201 PRRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPTS*S 380 PR P + P ++PR+ + R R+PR RD + +QP P S Sbjct: 91 PREPRVPRPPREPREPRVP-------------RASRDPRVPRDPRDPRQPRSPREPRSPR 137 Query: 381 PDRPPQ 398 RPP+ Sbjct: 138 EPRPPR 143
>WAPL_DROME (Q9W517) Protein wings apart-like (Protein parallel sister| chromatids) Length = 1741 Score = 29.3 bits (64), Expect = 3.7 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +3 Query: 285 SLELRHEREPRQERDRGEEQQPHDDLVPTS*SPDRPPQ 398 SLE + E +E + EE+ P + SPD+PP+ Sbjct: 435 SLEPNEDEEEEEEEEDEEEEPPEINYCTVKISPDKPPK 472
>RDP1_SCHPO (O13862) Transcriptional activator protein rdp1 (Rhp51-DRE-binding| protein 1) Length = 478 Score = 29.3 bits (64), Expect = 3.7 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +3 Query: 348 PHDDLVPTS*SPDRPPQPHPHD 413 PHDDL P S S R +PHP D Sbjct: 227 PHDDLRPLSDSRRRARRPHPSD 248
>TWIST_DROVI (Q9TX44) Protein twist| Length = 519 Score = 29.3 bits (64), Expect = 3.7 Identities = 14/44 (31%), Positives = 28/44 (63%) Frame = +3 Query: 243 DLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPTS 374 D QT A + EH L L+ +++ +Q++ + ++QQ + D +PT+ Sbjct: 179 DCQTDALSMQPEHKKL-LQQQQQQQQQQQQQQQQQLYVDYLPTT 221
>IRS1_XENTR (Q6P4Y6) Insulin receptor substrate 1 (IRS-1)| Length = 654 Score = 29.3 bits (64), Expect = 3.7 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 10/101 (9%) Frame = +3 Query: 120 PSSMPTIVYLPYY*LRRQSIHLPIVLAPRRPVLLVPTQDPRDLQTTAEG----LVEEHPS 287 P + V+LP R++ ++ + L RR +++ P ++ EG L +E + Sbjct: 325 PGVLEAPVFLPPSPGPRETNYISMALYGRRSLVMEPISTNANVPAE-EGSRLTLFQEEDN 383 Query: 288 LELRHEREPRQER------DRGEEQQPHDDLVPTS*SPDRP 392 + +REPRQE Q + + PTS SP P Sbjct: 384 YAMMGQREPRQETGYMPMLPGSNRSQDYMPMTPTSISPPAP 424
>HEPA_VZVD (P09300) DNA helicase/primase complex-associated protein| Length = 771 Score = 29.3 bits (64), Expect = 3.7 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 7/39 (17%) Frame = +1 Query: 34 SCALL--LHCQCNLQPGIHTYI-----LLTSHNRYSHPA 129 SCA + + C +L+P IHT++ LL +HN +S P+ Sbjct: 717 SCACIPPIDCAAHLKPLIHTFVTIINHLLDAHNDFSSPS 755
>AT221_ASPFU (Q4WH97) Autophagy-related protein 22-1| Length = 609 Score = 28.9 bits (63), Expect = 4.9 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +3 Query: 267 LVEEHPSLELRHEREPRQERDRGEEQQPHDD 359 LV HPS+ LR REPR D Q+ H D Sbjct: 203 LVRHHPSV-LRSAREPRPALDDSRAQEGHSD 232
>CD2L6_MOUSE (Q8BWD8) Cell division cycle 2-like protein kinase 6 (EC 2.7.11.22)| (CDC2-related protein kinase 6) Length = 501 Score = 28.9 bits (63), Expect = 4.9 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%) Frame = +3 Query: 231 QDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQ--PHDDLVPTS*SPDRPPQPH 404 +DP G +P E +E EP ++ D+ + QQ PH + PPQ Sbjct: 337 EDPLPTLDVFAGCQIPYPKREFLNEDEPEEKGDKNQPQQQNPHQQPAAPAQQTAAPPQAP 396 Query: 405 P 407 P Sbjct: 397 P 397
>YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-)| Length = 1117 Score = 28.9 bits (63), Expect = 4.9 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 8/46 (17%) Frame = +3 Query: 24 HMIILCTTTTLPMQFAAWNTYIH--------TTDKPQPLQPSSMPT 137 H + L T MQFA W T IH T +P PLQ P+ Sbjct: 337 HFVFLSATIPNAMQFAEWITKIHRQPCHVVYTDFRPTPLQHYLFPS 382
>ZN282_HUMAN (Q9UDV7) Zinc finger protein 282 (HTLV-I U5RE-binding protein 1)| (HUB-1) Length = 671 Score = 28.9 bits (63), Expect = 4.9 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 10/66 (15%) Frame = +3 Query: 240 RDLQT--TAEGLVEEHPSLE-LRHEREP-------RQERDRGEEQQPHDDLVPTS*SPDR 389 RD+ T +E L+ H L ++ E +P + + G + P D L+ P Sbjct: 347 RDIPTDPNSESLISAHDILSWIKQEEQPYPWGPRDSMDGELGLDSGPSDSLLMVKNPPPA 406 Query: 390 PPQPHP 407 PPQP P Sbjct: 407 PPQPQP 412
>TRHY_HUMAN (Q07283) Trichohyalin| Length = 1898 Score = 28.5 bits (62), Expect = 6.4 Identities = 20/54 (37%), Positives = 26/54 (48%) Frame = +3 Query: 204 RRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLV 365 RR L + +LQ E L+ E P R ERE RQ R+ E QQ + L+ Sbjct: 1089 RRQELERQYRKEEELQQEEEQLLREEPEKRRRQERE-RQCREEEELQQEEEQLL 1141
>RAD21_MOUSE (Q61550) Double-strand-break repair protein rad21 homolog (Pokeweed| agglutinin-binding protein 29) (PW29) (SCC1 homolog) Length = 635 Score = 28.5 bits (62), Expect = 6.4 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +3 Query: 210 PVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDD 359 PV L P + P Q P LEL E+E +E+++ EE++ D+ Sbjct: 505 PVELPPEEPPNICQLI--------PELELLPEKEKEKEKEKEEEEEEEDE 546
>TIM54_NEUCR (Q9C0Q7) Mitochondrial import inner membrane translocase subunit| tim-54 Length = 425 Score = 28.5 bits (62), Expect = 6.4 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 2/76 (2%) Frame = +3 Query: 192 VLAPRRPVLLVPTQDPRDLQTTAEGLV--EEHPSLELRHEREPRQERDRGEEQQPHDDLV 365 ++AP P L PT P AEG E+ P+ E + E P+ Sbjct: 187 LVAPAEPAPLPPTPAP----AAAEGSTSTEDKPAEEKKEEEAPK---------------- 226 Query: 366 PTS*SPDRPPQPHPHD 413 P RPPQP P++ Sbjct: 227 -----PKRPPQPKPYN 237
>PHF1_HUMAN (O43189) PHD finger protein 1 (PHF1 protein)| Length = 567 Score = 28.5 bits (62), Expect = 6.4 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = +3 Query: 234 DPRDLQTTAEGLVEE-HPSLELRHEREPRQERDRGEEQQPHDDLVPTS*SPDRPPQPHPH 410 +P L+ +G VEE P +R++ EP+++R+R Q+ V PP P P+ Sbjct: 372 EPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHLQRALQASV-------SPPSPSPN 424
>CD2L6_HUMAN (Q9BWU1) Cell division cycle 2-like protein kinase 6 (EC 2.7.11.22)| (CDC2-related protein kinase 6) (Death-preventing kinase) (Cyclin-dependent kinase 11) Length = 502 Score = 28.5 bits (62), Expect = 6.4 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Frame = +3 Query: 231 QDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPTS*SPDR---PPQP 401 +DP G +P E +E +P ++ D+ ++QQ + PT+ P + PPQ Sbjct: 337 EDPLPTLDVFAGCQIPYPKREFLNEDDPEEKGDKNQQQQQNQHQQPTA-PPQQAAAPPQA 395 Query: 402 HP 407 P Sbjct: 396 PP 397
>ANI3_CAEEL (Q9XWN6) Anillin-like protein 3| Length = 709 Score = 28.5 bits (62), Expect = 6.4 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = +1 Query: 220 LCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARNAIGVKSSSPMMIS 363 L R+L ICR RLK L+ +R + T H I S M+IS Sbjct: 367 LASQRVLLICRERLKVQLEEVRRLQAMTVVRHPPPPINRHFKSTMVIS 414
>FTSK_SALTI (Q8Z814) DNA translocase ftsK| Length = 1343 Score = 28.5 bits (62), Expect = 6.4 Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 2/120 (1%) Frame = +3 Query: 54 LPMQFAAWNTYIHTTDKPQPLQPSSMPTIVYLPYY*LRRQSIHLPIVLAPRRPVLLVPTQ 233 L QFAA ++ ++P QP S+ + + P L + H P+ P P Q Sbjct: 665 LARQFAASQQQRYSGEQPAGAQPFSLDDLDFSPMKVLVDEGPHEPLFTPGVMPE-STPVQ 723 Query: 234 DPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPTS--*SPDRPPQPHP 407 P Q + V P ++++ + + + QQP + P P +P P P Sbjct: 724 QPVAPQPQYQQPVAPQP----QYQQPQQPVASQPQYQQPQQPVAPQPQYQQPQQPVAPQP 779
>INVO_SAGOE (P24712) Involucrin| Length = 493 Score = 28.5 bits (62), Expect = 6.4 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 7/97 (7%) Frame = +3 Query: 78 NTYIHTTDKPQPLQPSSMPTIVYLPYY*L-RRQSIHLPIVLAPRRPVLLVPTQDPRDLQT 254 NT +P PL P V LP L + + H+ IV VP Q+ Q Sbjct: 28 NTQQEQRKQPAPLPPPCQKVPVELPVEVLSKHEEKHMTIVKG-------VPEQECEQQQP 80 Query: 255 TAEGLVEEHPSLELRH------EREPRQERDRGEEQQ 347 + L ++H + H E++ +QE+ + E+QQ Sbjct: 81 QEQELQQQHWEQDKEHQKAENPEQQLKQEKVQREKQQ 117
>IMA1_XENLA (P52170) Importin alpha-1 subunit (Karyopherin alpha-1 subunit)| Length = 521 Score = 28.1 bits (61), Expect = 8.3 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Frame = +3 Query: 162 LRRQSIHLP--IVLAPRRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRG 335 L+R+++ LP ++L+P + + P L+ +G+ P ELR + R+ R Sbjct: 44 LKRRNVCLPEELILSPEKNAMQSVQVPPLSLEEIVQGMNSGDPENELRCTQAARKMLSR- 102 Query: 336 EEQQPHDDLV 365 E P +D++ Sbjct: 103 ERNPPLNDII 112
>CF2_DROME (P20385) Chorion transcription factor Cf2, isoforms I/II| Length = 510 Score = 28.1 bits (61), Expect = 8.3 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = +3 Query: 222 VPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQ 347 +P PRD++ T E E+H +L+ E +Q+ + ++QQ Sbjct: 210 LPAMAPRDMRLTPE---EQHHQQQLQAEHHHQQQHQQQQQQQ 248
>SPAA_STRDO (P21979) Cell surface antigen I/II precursor| Length = 1528 Score = 28.1 bits (61), Expect = 8.3 Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 8/109 (7%) Frame = +3 Query: 93 TTDKPQPLQPSSMPTIVYLPYY*LRRQSIHLPIVLAPR-RPVLLVPTQDP------RDLQ 251 T +KP P + P P Y + ++ + LP+ P+ P P+++P + ++ Sbjct: 844 TKEKPTPPVEPTKPDE---PTYEVEKELVDLPV--EPKYEPEPTPPSKNPDQSIPEKPVE 898 Query: 252 TTAEGLVEEHPS-LELRHEREPRQERDRGEEQQPHDDLVPTS*SPDRPP 395 T E E P+ +E +E+EP + ++++P + P+ S PP Sbjct: 899 PTYEVEKELEPAPVEPSYEKEPTPPQSTPDQEEPEKPVEPSYQSLPTPP 947
>CF23_DROME (Q01522) Chorion transcription factor Cf2, isoform III| Length = 514 Score = 28.1 bits (61), Expect = 8.3 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = +3 Query: 222 VPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQ 347 +P PRD++ T E E+H +L+ E +Q+ + ++QQ Sbjct: 210 LPAMAPRDMRLTPE---EQHHQQQLQAEHHHQQQHQQQQQQQ 248
>NDF1_XENLA (Q91616) Neurogenic differentiation factor 1 (NeuroD1)| Length = 352 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = +3 Query: 228 TQDPRDLQTTAEGLVEEHPSLELRHER-EPRQERDRGEEQQPHDD 359 +QD DL+ L++E L H E +E D G+E++ D+ Sbjct: 28 SQDENDLEKKEGELMKEDDEDSLNHHNGEENEEEDEGDEEEEDDE 72
>MYST3_RAT (Q5TKR9) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Monocytic leukemia zinc finger protein) (Monocytic leukemia zinc finger homolog) Length = 1998 Score = 28.1 bits (61), Expect = 8.3 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Frame = +3 Query: 195 LAPRRPVLLVPTQDPRDLQTTAEGLVEEH-PSLELRHEREPRQERDRGEEQQPHDDLVPT 371 + P +P TQ+ +L EGLVEE + + E +E D + + Sbjct: 1193 IVPIKPGRKPRTQESEELVEVKEGLVEERKEEMHTEADEEAEEEEDAASSDIRAMSPLDS 1252 Query: 372 S*SPDRPPQ 398 S SPD P+ Sbjct: 1253 SNSPDADPK 1261
>BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 975 Score = 28.1 bits (61), Expect = 8.3 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +3 Query: 243 DLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQP 350 DL T + LV P + +E + +R+RGE Q+P Sbjct: 119 DLLTERKALVVPEPEPDSDSNQERKDDRERGEGQEP 154 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,810,343 Number of Sequences: 219361 Number of extensions: 1135425 Number of successful extensions: 4803 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 4334 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4756 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)