ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd24d13 |
|---|---|
| Clone Library Name | barley_pub |
>RK21_ARATH (P51412) 50S ribosomal protein L21, chloroplast precursor (CL21)| Length = 220 Score = 74.3 bits (181), Expect = 7e-14 Identities = 37/68 (54%), Positives = 42/68 (61%) Frame = -3 Query: 344 YIGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGISGYXXY 165 YIG VV N VHA+VE QG D KY+R GHRQPNTR+RITGI+GY Y Sbjct: 148 YIGKPVVTNATVHAVVESQGLNDKVVVFKYKPKKKYRRNIGHRQPNTRIRITGITGYEEY 207 Query: 164 PADPILQV 141 PA P + V Sbjct: 208 PASPNVAV 215
>RK21_SPIOL (P24613) 50S ribosomal protein L21, chloroplast precursor (CL21)| (CS-L7) Length = 256 Score = 64.3 bits (155), Expect = 7e-11 Identities = 31/65 (47%), Positives = 38/65 (58%) Frame = -3 Query: 344 YIGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGISGYXXY 165 YIG +V N AVHA+VE Q D Y+R GHRQP TR++ITGI+GY Y Sbjct: 171 YIGTPIVTNAAVHAVVEEQLLDDKVIVFKYKKKKNYRRNIGHRQPITRIKITGITGYEDY 230 Query: 164 PADPI 150 PA + Sbjct: 231 PASTL 235
>RM21_ARATH (Q8L9A0) 50S ribosomal protein L21, mitochondrial precursor| Length = 270 Score = 39.3 bits (90), Expect = 0.002 Identities = 20/55 (36%), Positives = 27/55 (49%) Frame = -3 Query: 341 IGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGISG 177 IG ++ + VHA+VE + Y+R GHRQ T+LRIT I G Sbjct: 189 IGRPILPDATVHAVVEEHALDEKVLIFKKKRRKNYRRTRGHRQELTKLRITDIQG 243
>RL21_THET8 (P60492) 50S ribosomal protein L21| Length = 101 Score = 33.9 bits (76), Expect = 0.10 Identities = 21/58 (36%), Positives = 25/58 (43%) Frame = -3 Query: 350 KXYIGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGISG 177 K +G VV +V A V G +Y+RK GHRQP T L I I G Sbjct: 44 KTVVGTPVVEGASVVAEVLGHGRGKKILVSKFKAKVQYRRKKGHRQPYTELLIKEIRG 101
>RL21_STAS1 (Q49Y85) 50S ribosomal protein L21| Length = 102 Score = 32.0 bits (71), Expect = 0.38 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = -3 Query: 341 IGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 180 +G V +V A V+ QG +RK GHRQP T+L I I+ Sbjct: 48 VGAPTVEGASVTATVQKQGRGKKITVFTYKRRKDSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAES (Q8CS87) 50S ribosomal protein L21| Length = 102 Score = 31.2 bits (69), Expect = 0.65 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = -3 Query: 341 IGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 180 +G V +V A V QG +RK GHRQP T+L I I+ Sbjct: 48 VGAPTVEGASVTATVNKQGRGKKITVFTYKRRKDSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAEQ (Q5HNQ4) 50S ribosomal protein L21| Length = 102 Score = 31.2 bits (69), Expect = 0.65 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = -3 Query: 341 IGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 180 +G V +V A V QG +RK GHRQP T+L I I+ Sbjct: 48 VGAPTVEGASVTATVNKQGRGKKITVFTYKRRKDSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAAW (Q7A0Q2) 50S ribosomal protein L21| Length = 102 Score = 30.8 bits (68), Expect = 0.85 Identities = 18/54 (33%), Positives = 22/54 (40%) Frame = -3 Query: 341 IGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 180 +G V V A V QG +RK GHRQP T+L I I+ Sbjct: 48 VGAPTVEGATVTATVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAAS (Q6G8S2) 50S ribosomal protein L21| Length = 102 Score = 30.8 bits (68), Expect = 0.85 Identities = 18/54 (33%), Positives = 22/54 (40%) Frame = -3 Query: 341 IGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 180 +G V V A V QG +RK GHRQP T+L I I+ Sbjct: 48 VGAPTVEGATVTATVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAAR (Q6GG57) 50S ribosomal protein L21| Length = 102 Score = 30.8 bits (68), Expect = 0.85 Identities = 18/54 (33%), Positives = 22/54 (40%) Frame = -3 Query: 341 IGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 180 +G V V A V QG +RK GHRQP T+L I I+ Sbjct: 48 VGAPTVEGATVTATVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAAN (Q7A583) 50S ribosomal protein L21| Length = 102 Score = 30.8 bits (68), Expect = 0.85 Identities = 18/54 (33%), Positives = 22/54 (40%) Frame = -3 Query: 341 IGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 180 +G V V A V QG +RK GHRQP T+L I I+ Sbjct: 48 VGAPTVEGATVTATVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAAM (Q99TK6) 50S ribosomal protein L21| Length = 102 Score = 30.8 bits (68), Expect = 0.85 Identities = 18/54 (33%), Positives = 22/54 (40%) Frame = -3 Query: 341 IGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 180 +G V V A V QG +RK GHRQP T+L I I+ Sbjct: 48 VGAPTVEGATVTATVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAAC (Q5HFB6) 50S ribosomal protein L21| Length = 102 Score = 30.8 bits (68), Expect = 0.85 Identities = 18/54 (33%), Positives = 22/54 (40%) Frame = -3 Query: 341 IGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 180 +G V V A V QG +RK GHRQP T+L I I+ Sbjct: 48 VGAPTVEGATVTATVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKIN 101
>RL21_RICPR (Q9ZCI9) 50S ribosomal protein L21| Length = 105 Score = 30.8 bits (68), Expect = 0.85 Identities = 18/55 (32%), Positives = 25/55 (45%) Frame = -3 Query: 344 YIGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 180 +IG +V V A + Q + Y+RKAGHRQ T L+I I+ Sbjct: 49 FIGTPIVKGAIVTAEITNQLKDNKIIAFKKKRRKNYRRKAGHRQELTELKILDIT 103
>RL21_STAHJ (Q4L6Z3) 50S ribosomal protein L21| Length = 102 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/53 (33%), Positives = 21/53 (39%) Frame = -3 Query: 341 IGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGI 183 +G V V A V QG +RK GHRQP T+L I I Sbjct: 48 VGAPTVEGATVTATVNKQGRGKKITVFTYKRRKDSKRKKGHRQPYTKLTIDKI 100
>RL21_STAAU (Q93EP0) 50S ribosomal protein L21| Length = 102 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/54 (33%), Positives = 21/54 (38%) Frame = -3 Query: 341 IGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 180 +G V V A V QG RK GHRQP T+L I I+ Sbjct: 48 VGAPTVEGATVTATVNKQGRGKKITVFTYKRRKNSXRKKGHRQPYTKLTIDKIN 101
>RL21_SHIFL (P0AG50) 50S ribosomal protein L21| Length = 103 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/54 (31%), Positives = 25/54 (46%) Frame = -3 Query: 341 IGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 180 IG+ V + A V G + Y+++ GHRQ T ++ITGIS Sbjct: 49 IGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS 102
>RL21_ECOLI (P0AG48) 50S ribosomal protein L21| Length = 103 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/54 (31%), Positives = 25/54 (46%) Frame = -3 Query: 341 IGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 180 IG+ V + A V G + Y+++ GHRQ T ++ITGIS Sbjct: 49 IGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS 102
>RL21_ECO57 (P0AG49) 50S ribosomal protein L21| Length = 103 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/54 (31%), Positives = 25/54 (46%) Frame = -3 Query: 341 IGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 180 IG+ V + A V G + Y+++ GHRQ T ++ITGIS Sbjct: 49 IGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS 102
>RL21_BACSU (P26908) 50S ribosomal protein L21 (BL20)| Length = 102 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/54 (31%), Positives = 22/54 (40%) Frame = -3 Query: 341 IGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 180 +G V V A VE QG +K GHRQP T++ I I+ Sbjct: 48 VGNPTVEGATVTAKVEKQGRAKKITVFRYKPKKNVHKKQGHRQPYTKVTIEKIN 101
>RL21_HAEIN (P44359) 50S ribosomal protein L21| Length = 103 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/53 (33%), Positives = 24/53 (45%) Frame = -3 Query: 341 IGMXVVXNXAVHAIVEXQGXXDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGI 183 IG VV V A V QG + +++ GHRQ T ++ITGI Sbjct: 49 IGAPVVAGAKVVAEVVAQGRGEKVKIVKFRRRKHSRKQQGHRQWFTEVKITGI 101
>RL21_DEIRA (Q9RY64) 50S ribosomal protein L21| Length = 100 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = -3 Query: 239 YQRKAGHRQPNTRLRITGISG 177 Y+R+ GHRQ T ++I GI G Sbjct: 80 YRRRTGHRQNFTAIKILGIQG 100
>P2Y13_MACFA (Q9BE53) P2Y purinoceptor 13 (P2Y13) (G-protein coupled receptor| 86) (Fragment) Length = 245 Score = 28.1 bits (61), Expect = 5.5 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = +1 Query: 229 FLWYFFFFLNLKTITLSN 282 F+W FFFF++L + LSN Sbjct: 57 FIWSFFFFISLPNMILSN 74
>RL21_STRGR (P95756) 50S ribosomal protein L21| Length = 106 Score = 28.1 bits (61), Expect = 5.5 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = -3 Query: 239 YQRKAGHRQPNTRLRITGI 183 Y+R+ GHRQ T +++TGI Sbjct: 83 YRRRQGHRQQYTAIKVTGI 101
>P2Y13_HUMAN (Q9BPV8) P2Y purinoceptor 13 (P2Y13) (G-protein coupled receptor| 86) (G-protein coupled receptor 94) Length = 333 Score = 27.7 bits (60), Expect = 7.2 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +1 Query: 229 FLWYFFFFLNLKTITLSN 282 F+W+F FF++L + LSN Sbjct: 145 FIWFFLFFISLPNMILSN 162 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,837,238 Number of Sequences: 219361 Number of extensions: 405060 Number of successful extensions: 714 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 711 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 714 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
